Mock Version: 2.8
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/bout++.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fe7b884b1c0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '7193a5b721f141cda55a14220be16177', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/bout++.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1610841600
Wrote: /builddir/build/SRPMS/bout++-4.3.2-4.fc34.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/bout++.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fe7b884b1c0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '39a09b0a33ac4467b4366baf428b175c', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xz6_awft:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/bout++.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1610841600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kZIKss
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf BOUT++-v4.3.2
+ /usr/bin/gzip -dc /builddir/build/SOURCES/BOUT++-v4.3.2.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd BOUT++-v4.3.2
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -rf externalpackages/mpark.variant/
+ mkdir -p externalpackages/mpark.variant/include/
++ find -L tools/pylib/ -type f
++ grep -v _boutcore_build
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/zoidberg.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_zoidberg.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_rzline.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_poloidal_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_fieldtracer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_field.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/rzline.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/progress.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/poloidal_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/plot.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/fieldtracer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/field.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/boundary.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/rms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_inp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_cxx.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_present.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_nonlinear.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_draw.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_corral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/grate2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/basic_info.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/ListDict.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/crosslines.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/geqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/local_min_max.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/watch.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/volume_integral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/surface_average.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/spectrogram.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/showdata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/run_wrapper.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/read_geqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/radial_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/plotpolslice.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/plotdata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/options.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/moment_xyzt.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/mode_structure.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/linear_regression.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/int_func.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/idl_tabulate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/file_import.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/fft_integrate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/fft_deriv.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/efit_analyzer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/datafile.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/contour.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/closest_line.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/check_scaling.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/calculus.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutwarnings.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutgrid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutarray.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/ask.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/anim.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/analyse_equil_2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/View3D.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/squashoutput.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/shiftz.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/settings.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/restart.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/processor_rearrange.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/pol_slice.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/mms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/mayavi2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/input.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/griddata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/gen_surface.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/data.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/collect.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/cbdtoeqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/bout_runners.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/.gitignore
+ autoreconf
autoreconf: configure.ac: AM_GNU_GETTEXT is used, but not AM_GNU_GETTEXT_VERSION
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.meTzmW
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ for mpi in mpich openmpi
+ mkdir build_mpich
+ cp -al CHANGELOG.md CITATION.bib CITATION.cff CMakeLists.txt CONTRIBUTING.md LICENSE LICENSE.GPL README.md aclocal.m4 aminclude_static.am autom4te.cache change_summary.md cmake configure configure.ac examples externalpackages include locale m4 make.config.in makefile makefile.submodules manual output.make requirements.txt src tests tools build-aux bin build_mpich
+ for mpi in mpich openmpi
+ mkdir build_openmpi
+ cp -al CHANGELOG.md CITATION.bib CITATION.cff CMakeLists.txt CONTRIBUTING.md LICENSE LICENSE.GPL README.md aclocal.m4 aminclude_static.am autom4te.cache change_summary.md cmake configure configure.ac examples externalpackages include locale m4 make.config.in makefile makefile.submodules manual output.make requirements.txt src tests tools build-aux bin build_openmpi
+ for mpi in mpich openmpi
+ pushd build_mpich
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2021-01-17 14:29:36.015190724 +0000
+++ ./configure	2021-01-17 14:29:36.243185144 +0000
@@ -1953,7 +1953,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./build-aux/config.sub
++ basename ./build-aux/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./build-aux/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './build-aux/config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./build-aux/config.guess
++ basename ./build-aux/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./build-aux/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './build-aux/config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./build-aux/ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-netcdf --with-hdf5 --enable-shared --with-system-mpark --libdir=/usr/lib64/mpich/lib --bindir=/usr/lib64/mpich/bin --sbindir=/usr/lib64/mpich/sbin --includedir=/usr/include/mpich-x86_64 --datarootdir=/usr/share --with-petsc --with-sundials
configure: WARNING: unrecognized options: --disable-dependency-tracking
checking for x86_64-redhat-linux-gnu-mpic++... no
checking for x86_64-redhat-linux-gnu-mpicxx... no
checking for x86_64-redhat-linux-gnu-mpiCC... no
checking for x86_64-redhat-linux-gnu-sxmpic++... no
checking for x86_64-redhat-linux-gnu-hcp... no
checking for x86_64-redhat-linux-gnu-mpxlC_r... no
checking for x86_64-redhat-linux-gnu-mpxlC... no
checking for x86_64-redhat-linux-gnu-mpixlcxx_r... no
checking for x86_64-redhat-linux-gnu-mpixlcxx... no
checking for x86_64-redhat-linux-gnu-mpg++... no
checking for x86_64-redhat-linux-gnu-mpc++... no
checking for x86_64-redhat-linux-gnu-mpCC... no
checking for x86_64-redhat-linux-gnu-cmpic++... no
checking for x86_64-redhat-linux-gnu-mpiFCC... no
checking for x86_64-redhat-linux-gnu-CCicpc... no
checking for x86_64-redhat-linux-gnu-pgCC... no
checking for x86_64-redhat-linux-gnu-pathCC... no
checking for x86_64-redhat-linux-gnu-sxc++... no
checking for x86_64-redhat-linux-gnu-xlC_r... no
checking for x86_64-redhat-linux-gnu-xlC... no
checking for x86_64-redhat-linux-gnu-bgxlC_r... no
checking for x86_64-redhat-linux-gnu-bgxlC... no
checking for x86_64-redhat-linux-gnu-openCC... no
checking for x86_64-redhat-linux-gnu-sunCC... no
checking for x86_64-redhat-linux-gnu-crayCC... no
checking for x86_64-redhat-linux-gnu-aCC... no
checking for x86_64-redhat-linux-gnu-CC... no
checking for x86_64-redhat-linux-gnu-g++... no
checking for x86_64-redhat-linux-gnu-c++... no
checking for x86_64-redhat-linux-gnu-gpp... no
checking for x86_64-redhat-linux-gnu-cxx... no
checking for x86_64-redhat-linux-gnu-cc++... no
checking for x86_64-redhat-linux-gnu-cl.exe... no
checking for x86_64-redhat-linux-gnu-FCC... no
checking for x86_64-redhat-linux-gnu-KCC... no
checking for x86_64-redhat-linux-gnu-RCC... no
checking for mpic++... mpic++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether mpic++ accepts -g... yes
checking for function MPI_Init... yes
checking for mpi.h... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for gmake... gmake
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking whether mpic++ supports C++11 features by default... yes
checking for sqrt in -lm... yes
checking how to run the C++ preprocessor... mpic++ -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for vprintf... yes
checking for _doprnt... no
checking does C++ compiler support __PRETTY_FUNCTION__... yes
checking for a sed that does not truncate output... /usr/bin/sed
checking whether to build with code coverage support... no
checking whether C++ compiler accepts -Werror=unknown-warning-option... no
checking whether C++ compiler accepts -we10006,10148... no
checking whether C++ compiler accepts -Wall... yes
checking whether C++ compiler accepts -Wextra... yes
checking whether C++ compiler accepts -Wnull-dereference... yes
checking whether C++ compiler accepts -Wno-cast-function-type... yes
configure: Enabling default optimisations
checking whether C++ compiler accepts -O2... yes
configure: Run-time checking enabled
configure:  -> Level 2 (Basic checking + stack tracing)
configure: Segmentation fault handling enabled
configure: Output coloring enabled
configure: Field name tracking disabled
configure: Signaling floating point exceptions disabled
checking for addr2line... yes
checking for popen... yes
checking for backtrace... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for library containing dladdr... -ldl
configure: Native backtrace enabled
./configure: line 6363: git: command not found
checking for fftw-wisdom... /usr/bin/fftw-wisdom
checking for fftw3.h... yes
checking for libfftw3... yes
checking for ncxx4-config... /usr/bin/ncxx4-config
configure:  -> NetCDF-4 support enabled
configure: Parallel-NetCDF support disabled
checking for gawk... gawk
checking for x86_64-redhat-linux-gnu-gcc... mpicc
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking how to run the C preprocessor... mpicc -E
checking for h5cc... /usr/bin/h5cc
checking for HDF5 type... serial
checking for HDF5 libraries... yes (version 1.10.6)
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for main in -lhdf5_hl... yes
configure: Found HDF5
configure: Parallel HDF5 support disabled
configure: Supported file formats: netCDF HDF5
checking for libblas... no
checking for liblapack... no
checking for x86_64-redhat-linux-gnu-pkg-config... /usr/bin/x86_64-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
configure: Using PETSC_DIR=, PETSC_ARCH=
checking for //conf... no
checking for //lib/petsc/conf... no
checking for PETSC... yes
checking PETSc has SUNDIALS support... no
checking for SUNDIALS config header... yes
checking for SUNDIALS minor version... ok
configure: Searching for SUNDIALS IDA library
checking for sundials-config... no
configure: WARNING: No sundials-config available, no path given, will try compiling with IDA anyway
checking if we can compile with SUNDIALS IDA... yes
configure: Using SUNDIALS IDA solver
configure: => IDA solver enabled
configure: Searching for SUNDIALS CVODE library
checking for sundials-config... (cached) no
checking if we can compile with SUNDIALS CVODE... configure: WARNING: No sundials-config available, no path given, will try compiling with CVODE anyway
yes
configure: Using SUNDIALS CVODE solver
configure: => CVODE solver enabled
configure: Searching for SUNDIALS ARKODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with ARKODE anyway
checking if we can compile with SUNDIALS ARKODE... yes
configure: Using SUNDIALS ARKODE solver
configure: => ARKODE solver enabled
configure: Scorep support disabled
checking for mpark.variant... yes
configure: PVODE being built without OpenMP support
configure: Building PVODE
configure: Successfully built PVODE
configure: Installing PVODE into BOUT++ sourcetree
checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/msgfmt
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... /bin/sh: build-aux/config.rpath: No such file or directory
done
checking 32-bit host C ABI... no
checking for ELF binary format... yes
checking for the common suffixes of directories in the library search path... lib,lib,lib64
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyPreferredLanguages... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
configure: Enabling language support with gettext
gmake: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/locale'
Building language:  de
Building language:  es
Building language:  fr
Building language:  zh_CN
Building language:  zh_TW
gmake: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/locale'
configure: creating ./config.status
config.status: creating make.config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: creating ./config.status
config.status: creating make.config
config.status: creating bin/bout-config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: -------------------------
configure:   Configuration summary  
configure: -------------------------
configure:   PETSc support           : yes (has SUNDIALS: no)
configure:   SLEPc support           : no
configure:   IDA support             : yes
configure:   CVODE support           : yes
configure:   ARKODE support          : yes
configure:   FFTW support            : yes
configure:   NetCDF support          : yes
configure:   Parallel-NetCDF support : no
configure:   HDF5 support            : yes (parallel: no)
configure:   MUMPS support           : no
configure:   Lapack support          : no
configure:   Scorep support          : no
configure:   OpenMP support          : no (schedule: )
configure:   Natural language support: yes (path: ${datarootdir}/locale)
configure: 
configure: -------------------------------
configure:   Data analysis configuration  
configure: -------------------------------
configure: 
configure: === IDL ===
configure: 
configure: Make sure that the tools/idllib directory is in your IDL_PATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:     export IDL_PATH=+/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/idllib:'<IDL_DEFAULT>':$IDL_PATH
configure: 
configure: === Python ===
configure: 
configure: Make sure that the tools/pylib directory is in your PYTHONPATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:    export PYTHONPATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/:$PYTHONPATH
configure: 
configure: *** Now run 'gmake' to compile BOUT++ ***
+ sed -e 's| -L/usr/lib64 | |g' -e 's| -Wl,--as-needed | |g' -i make.config
+ sed -e 's|-lblas|-lflexiblas|g' -e 's|-llapack|-lflexiblas|g' -i make.config
+ cat make.config
# configuration file for BOUT++
# September 2008: Converted to use autoconf. Can be manually edited
# for the (very) rare occasions when autoconf fails
# extra compilation flags:
# -DCHECK=lvl  Enables a host of additional checks on each operation
#              such as uninitialised data if lvl is > 0. -DCHECK=3
#              enables all tests, while -DCHECK=0 disables them.
#              Helps when debugging
# -DTRACK      Keeps track of variable names.
#              Enables more useful error messages
# for SSE2: -msse2 -mfpmath=sse
# 
# This must also specify one or more file formats
# -DPDBF  PDB format (need to include pdb_format.cxx)
# -DNCDF  NetCDF format (nc_format.cxx)
# PETSc config variables need to be first, else they may clobber other
# options (e.g. CXX, CXXFLAGS)
PETSC_DIR ?= 
PETSC_ARCH ?= 
SLEPC_DIR ?= 
SLEPC_ARCH ?= 
# These lines can be replaced in "make install" to point to install directories
# They are used in the CXXFLAGS variable below rather than hard-coding the directories
BOUT_INCLUDE_PATH=$(BOUT_TOP)/include
BOUT_LIB_PATH=$(BOUT_TOP)/lib
BOUT_CONFIG_FILE=$(BOUT_TOP)/make.config
prefix = /usr
exec_prefix = /usr
datarootdir = /usr/share
# This path to the locale (.mo) files is hard-wired into bout++.cxx at compile time
BOUT_LOCALE_PATH=${datarootdir}/locale
# Created this variable so that a user won't overwrite the CXXFLAGS variable
# on the command line, just add to this one
BOUT_FLAGS = $(CXXFLAGS) -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING="\"4.3.2\"" -DBOUT_VERSION_DOUBLE=4.32  -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=$(BOUT_LOCALE_PATH)   
#Use := here to force a "static" evaluation of the current state of BOUT_FLAGS to
#avoid infinite recursion that would arise if BOUT_FLAGS appeared on both sides of =
BOUT_FLAGS := $(BOUT_FLAGS) -DBOUT_FLAGS_STRING="$(BOUT_FLAGS)"
# Specify the MPI C++ compiler in CXX
CXX		= mpic++
CC      = $(CXX)
AR		= ar
ARFLAGS = cruU
RANLIB	= ranlib
MKDIR	= /usr/bin/mkdir -p
####################################################################
# Do not need to alter anything below
####################################################################
LD       = $(CXX)
LDFLAGS  = -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 
LIBS     = -ldl -lm  
CPPFLAGS = 
####################################################################
# Extra (optional) source files, includes and libs
# NOTE: EXTRA_SRC must include a solver (solver.cxx or ida_solver.cxx)
#       and a file format (nc_format.cxx or pdb_format.cxx)
####################################################################
EXTRA_INCS	  = $(CPPFLAGS)  -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc     
EXTRA_LIBS	  = $(LIBS)  -lfftw3 -lnetcdf_c++4 -lnetcdf  -lhdf5_hl -lhdf5  -lhdf5_hl -lsz -lz -ldl -lm -L/usr/lib64/mpich/lib -lpetsc   -lsundials_ida -lsundials_nvecparallel   -lsundials_cvode -lsundials_nvecparallel   -lsundials_arkode -lsundials_nvecparallel  -L$(BOUT_LIB_PATH) -lpvode -lpvpre  
PRECON_SOURCE = 
BOUT_VERSION  = 4.3.2
####################################################################
# These are used for compiling physics modules using BOUT++ library
####################################################################
# Files that are needed by configure and should be dependencies for 'all'
OBJ    = $(SOURCEC:%.cxx=%.o)
ifndef RELEASED
# If this is part of an packaged and installed installation, the user cannot
# write these files, so they shouldn't be changed. Thus only set this, in
# the non installed case.
LIB    = $(BOUT_LIB_PATH)/libbout++.a
LIB_SO = $(BOUT_LIB_PATH)/libbout++.so
endif
MPARK_VARIANT_INCLUDE_PATH=
BOUT_INCLUDE = -I$(BOUT_INCLUDE_PATH) $(CXXINCLUDE) $(EXTRA_INCS) 
BOUT_LIBS    = -lm -L$(BOUT_LIB_PATH) -lbout++ $(EXTRA_LIBS)
CHANGED = $(shell find -f $(BOUT_TOP)/include $(BOUT_TOP)/src -type f \( -name \*.cxx -or -name \*.h \) -newer $(LIB) -print 2> /dev/null)
# This will set a default if no TARGET is provided
TARGET				?= $(SOURCEC:%.cxx=%)
####################################################################
# Definining stuff for recursive make
####################################################################
# Phony targets since they are directory names
.PHONY: $(DIRS) lib install libfast runtest manual sphinx doxygen
ifneq ("$(TARGET)","libfast")
all: $(BOUT_CONFIG_FILE) $(DIRS) $(TARGET)
else
all: $(BOUT_TOP)/config.status $(BOUT_CONFIG_FILE) $(DIRS)
endif
libfast: $(BOUT_CONFIG_FILE) $(DIRS)
####################################################################
# Recursively run make through subdirs
####################################################################
ifeq ("$(TARGET)" , "lib")
$(DIRS):
# make $@ slowly using the old method where parallel builds can cause
# race conditions that 
	@$(MAKE) -s --no-print-directory TARGET=lib -C $@ all
else
ifeq ("$(TARGET)","libfast")
$(DIRS):
# make $@ using the libfast method, where all .o files
# are only created in the end
	@$(MAKE) -s --no-print-directory TARGET=$(TARGET) -C $@ $(TARGET)
else
MODULE_DIR?=$(shell pwd)
$(DIRS):
# MODULE_DIR: pass the module directory, where the libraries should be
# created.
# SUB_NAME is used for creating a library with the expected name.
# first a potential trailing slash is removed, and after that the
# directory name is extracted. This allows to e.g. specify a directory
# as fuu/bar/ and still get an archive named bar.a
	@$(MAKE) -s --no-print-directory MODULE_DIR=$(MODULE_DIR) SUB_NAME=$(shell basename $@) TARGET=sub -C $@
endif
endif
# Create 'lib' and 'include' incase they don't exist
$(BOUT_TOP)/include $(BOUT_TOP)/lib:
	$(MKDIR) $@
####################################################################
# Install header files and libraries
####################################################################
INSTALL = /usr/bin/install -c
INSTALL_PROGRAM = ${INSTALL}
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_INCLUDE_PATH = $(DESTDIR)/usr/include/mpich-x86_64/bout++/
# A list of relative paths e.g. "fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo"
MO_FILES = $(shell cd locale; ls */LC_MESSAGES/libbout.mo)
install: libfast
	$(PRE_INSTALL)     # Pre-install commands follow.
	$(NORMAL_INSTALL)  # Normal commands follow.
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/{,pvode,bout/sys,bout/invert}
	$(MKDIR) $(DESTDIR)/{/usr/lib64/mpich/lib,/usr/lib64/mpich/bin,/usr/share/bout++/idllib}
	$(MKDIR) $(DESTDIR)//usr/share/bout++/pylib/{boutdata,boututils}
	$(INSTALL_DATA) include/*.hxx $(INSTALL_INCLUDE_PATH)
ifeq ("", "yes")
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/mpark
	$(INSTALL_DATA) $(MPARK_VARIANT_INCLUDE_PATH)/mpark/*.hpp $(INSTALL_INCLUDE_PATH)/mpark
endif
	$(INSTALL_DATA) include/pvode/*.h $(INSTALL_INCLUDE_PATH)/pvode/
	$(INSTALL_DATA) include/bout/*.hxx $(INSTALL_INCLUDE_PATH)/bout/
	$(INSTALL_DATA) include/bout/sys/*.hxx $(INSTALL_INCLUDE_PATH)/bout/sys/
	$(INSTALL_DATA) include/bout/invert/*.hxx $(INSTALL_INCLUDE_PATH)/bout/invert/
	$(INSTALL_DATA) lib/libbout++.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_DATA) lib/libpvode.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_DATA) lib/libpvpre.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_PROGRAM)  bin/bout-config $(DESTDIR)/usr/lib64/mpich/bin
	$(INSTALL_PROGRAM)  bin/bout-log-color $(DESTDIR)/usr/lib64/mpich/bin
	$(INSTALL_DATA)  tools/idllib/*.pro $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/idllib/README $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/pylib/boutdata/*.py $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(INSTALL_DATA)  tools/pylib/boututils/*.py $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(INSTALL_DATA)  make.config $(INSTALL_INCLUDE_PATH)
	for mo in $(MO_FILES); do $(MKDIR) $(DESTDIR)${datarootdir}/locale/`dirname $$mo`; $(INSTALL_DATA) locale/$$mo $(DESTDIR)${datarootdir}/locale/$$mo; done
	$(POST_INSTALL)    # Post-install commands follow.
	@# Modify paths in the bout-config script 
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config 
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
endif
	@# Modify paths in the make.config file
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" $(INSTALL_INCLUDE_PATH)/make.config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
endif
#	Set the make.config as released, so the library isn't rebuild. This way the .a file doesn't need to be preserved/installed
	sed -i '26 i RELEASED                 = yes' $(INSTALL_INCLUDE_PATH)/make.config
uninstall:
	$(PRE_UNINSTALL)     # Pre-uninstall commands follow.
	$(NORMAL_UNINSTALL)  # Normal commands follow.
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(RM) -r $(DESTDIR)/usr/share/bout++/idllib/
	$(RM) $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	$(RM) $(DESTDIR)/usr/lib64/mpich/bin/bout-log-color
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libbout++.a
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libpvode.a
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libpvpre.a
	$(RM) -r  $(DESTDIR)/usr/include/mpich-x86_64/bout++/
	$(RM) $(DESTDIR)${datarootdir}/locale/*/LC_MESSAGES/libbout.mo
	$(POST_UNINSTALL)    # Post-uninstall commands follow.
####################################################################
# Builds the library with $(OBJ) which is defined from the SOURCEC variable
####################################################################
# Rules for downloading submodules
include $(BOUT_TOP)/makefile.submodules
ifeq ("$(TARGET)", "libfast")
libfast: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(OBJ) $(DIRS)
endif
ifeq ("$(TARGET)", "lib")
lib: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to libbout++.a"
	@$(AR) $(ARFLAGS) $(LIB) $(OBJ)
	@$(RANLIB) $(LIB)
endif
endif
ifeq ("$(TARGET)", "sub")
LIB=$(MODULE_DIR)/$(SUB_NAME).a
sub:$(LIB)
$(LIB): makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to $(LIB)"
	@LIBT=$(LIB).$$$$.a && \
		$(AR) $(ARFLAGS) $${LIBT} $(OBJ) && \
		$(RANLIB) $${LIBT} && \
		mv $${LIBT} $(LIB)
endif
endif
runtest:
	./runtest
ifneq ("$(TARGET)", "sub")
ifneq ("$(TARGET)", "libfast")
ifneq ("$(TARGET)", "lib")
ifneq ("$(TARGET)", "runtest")
####################################################################
# Make libbout++.a if it doesn't exist with the checklib target
####################################################################
libbout++.a:
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
 
####################################################################
# Make the target (e.g. gas_compress)
####################################################################
# first we remove a trailing slash, if present. Note that currently we
# dont support several trailing slashes, as in fuu/bar/// 
DIRS_=$(DIRS:%/=%)
# then we extract the directory name, in case it is a longer path
# We are not in a recipe, so # needs to be escaped
# $$ is an escaped $
DIRS__=$(shell for d in $(DIRS_) ; do basename $$d;done)
# now we can generate a list of libraries
SUB_LIBS=$(DIRS__:%=%.a)
$(SUB_LIBS):$(DIRS__)
$(SOURCEC): checklib
$(SOURCEC:%.cxx=%.o): $(LIB)
$(TARGET): | $(DIRS)
$(TARGET): makefile $(BOUT_CONFIG_FILE) $(OBJ) $(SUB_LIBS)
	@echo "  Linking" $(TARGET)
	@$(LD) $(LDFLAGS) -o $(TARGET) $(OBJ) $(SUB_LIBS) $(BOUT_LIBS)
checklib:
ifneq ("$(CHANGED)foo", "foo")
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
endif
endif
endif
endif
endif
# Ignore missing requirement files
-include .*.mk
# If it is a libfast target, track changes to rebuild library if needed
#
# Further track dependencies using gcc's -M feature:
# -MF  write the generated dependency rule to a file
# -MG  assume missing headers will be generated and don't stop with an error
# -MM  generate dependency rule for prerequisite, skipping system headers
# -MP  add phony target for each header to prevent errors when header is missing
# -MT  add a target to the generated dependency
# Ignore failure, in case some compiler does not support this
%.o: $(BOUT_CONFIG_FILE) %.cxx
	@echo "  Compiling " $(@:.o=.cxx)
	@$(CXX) $(BOUT_INCLUDE) $(BOUT_FLAGS) -c $(@:.o=.cxx) -o $@
ifeq ("$(TARGET)","libfast")
	test "$@" = "bout++.o" || touch $(BOUT_TOP)/lib/.last.o.file
endif
####################################################################
# Clean target. Pretty self explanatory.
# NOTE: See that double colon (::) below? That's signifies a rule that can be added to later
# See:
# http://owen.sj.ca.us/~rk/howto/slides/make/slides/makecolon.html
####################################################################
clean::
	-@$(RM) -rf $(OBJ) $(DEPS) $(TARGET)
	@for pp in $(DIRS); do echo "  " $$pp cleaned; $(MAKE) --no-print-directory -C $$pp clean; done
	@$(RM) -f $(SUB_LIBS)
	-@$(RM) .*.mk
	@test -f make.config && ( find src | grep '\.o$$' && echo "WARNING: Some object files remain - which might cause issues. Clean with $(MAKE) clean-remove-object-files" ) || exit 0
clean-remove-object-files:
	find src|grep '\.o$$' | xargs rm
distclean:: clean clean-tests
	@echo include cleaned
# Removing the externalpackage installation. When we have more packages, need a better way
	@$(RM) -rf $(BOUT_TOP)/include/pvode
	@echo lib cleaned
	@$(RM) -rf $(BOUT_TOP)/lib/*
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/lib/*.a
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/source/obj/*.o
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/precon/obj/*.o
	-@$(RM) -rf $(BOUT_TOP)/autom4te.cache make.config
	@echo externalpackages cleaned
	@touch $(BOUT_TOP)/configure
	@echo autom4te.cache cleaned
clean-tests: clean-unit-tests clean-integrated-tests clean-mms-tests
clean-unit-tests:
	@echo "   tests/unit cleaned"
	@$(MAKE) --no-print-directory -C tests/unit clean
clean-integrated-tests:
	@echo "   tests/integrated cleaned"
	@$(MAKE) --no-print-directory -C tests/integrated clean
clean-mms-tests:
	@echo "   tests/MMS cleaned"
	@$(MAKE) --no-print-directory -C tests/MMS clean
####################################################################
# Documentation
####################################################################
MANUAL_DIR=$(BOUT_TOP)/manual
doxygen:
	$(MAKE) -C $(MANUAL_DIR) doxygen
breathe-autogen:
	$(MAKE) -C $(MANUAL_DIR) breathe_autogen
sphinx-docs-html:
	$(MAKE) -C $(MANUAL_DIR) sphinx-html
sphinx-docs-latex:
	$(MAKE) -C $(MANUAL_DIR) sphinx-pdf
manual:
	$(MAKE) -C $(MANUAL_DIR)
manual-html:
	$(MAKE) -C $(MANUAL_DIR) html
manual-pdf:
	$(MAKE) -C $(MANUAL_DIR) pdf
python: libfast
	$(MAKE) -C tools/pylib python3
python2: libfast
	$(MAKE) -C tools/pylib python2
python-all:python python2
######################################################################
# Code coverage
######################################################################
GCOV = 
LCOV = 
GENHTML = 
abs_builddir = /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich
# Code coverage
#
# Optional:
#  - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting.
#    Multiple directories may be specified, separated by whitespace.
#    (Default: $(top_builddir))
#  - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated
#    by lcov for code coverage. (Default:
#    bout-coverage.info)
#  - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage
#    reports to be created. (Default:
#    bout-coverage)
#  - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage,
#    set to 0 to disable it and leave empty to stay with the default.
#    (Default: empty)
#  - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov
#    instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov
#    instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
#  - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov
#  - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the
#    collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
#  - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering
#    lcov instance. (Default: empty)
#  - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
#  - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the
#    genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml
#    instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore
#
# The generated report will be titled using the $(PACKAGE_NAME) and
# $(PACKAGE_VERSION). In order to add the current git hash to the title,
# use the git-version-gen script, available online.
# Optional variables
CODE_COVERAGE_DIRECTORY ?= $(abs_builddir)
CODE_COVERAGE_OUTPUT_FILE ?= bout-coverage.info
CODE_COVERAGE_OUTPUT_DIRECTORY ?= bout-coverage
CODE_COVERAGE_BRANCH_COVERAGE ?=
CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)"
CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?=
CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\
$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
CODE_COVERAGE_IGNORE_PATTERN ?= "*test*/*"
# Use recursive makes in order to ignore errors during check
check-code-coverage:
	@echo "Need to reconfigure with --enable-code-coverage"
# Capture code coverage data
code-coverage-capture: code-coverage-capture-hook
	@echo "Need to reconfigure with --enable-code-coverage"
# Hook rule executed before code-coverage-capture, overridable by the user
code-coverage-capture-hook:
GITIGNOREFILES ?=
GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)
.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean
+ make -j2 shared python
  Compiling  field.cxx
  Compiling  nc_format.cxx
  Compiling  ncxx4.cxx
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field2d.cxx
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from ncxx4.hxx:51,
                 from ncxx4.cxx:23:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pnetcdf.cxx
  Compiling  h5_format.cxx
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field3d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field3d.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field3d.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  datafile.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldperp.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fieldperp.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fieldperp.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_data.cxx
  Compiling  dataformat.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  formatfactory.cxx
  Compiling  fieldgroup.cxx
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from impls/netcdf4/ncxx4.hxx:51,
                 from formatfactory.cxx:8:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  cyclic.cxx
  Compiling  field_factory.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_parderiv.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parderiv_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldgenerators.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_tri.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  initialprofiles.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_band.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vecops.cxx
  Compiling  pdd.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  spt.cxx
  Compiling  vector2d.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/msg_stack.hxx:35,
                 from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/msg_stack.hxx:35,
                 from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vector3d.cxx
  Compiling  petsc_laplace.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  where.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mumps_laplace.cxx
  Compiling  globalfield.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cyclic_laplace.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  generated_fieldops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shoot_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_laplace.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_laplace.cxx
invert_laplace.cxx: In constructor 'Laplacian::Laplacian(Options*, CELL_LOC, Mesh*)':
invert_laplace.cxx:100:16: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                ^~~~~~~~
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx:100:30: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                              ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const FieldPerp&, FieldPerp&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:770:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  770 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const Field3D&, Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:800:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  800 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:831:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  831 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacefactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_alg.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_solver.cxx
  Compiling  naulin_laplace.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutmesh.cxx
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/msg_stack.hxx:35,
                 from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/msg_stack.hxx:35,
                 from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexy.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscis.h:7,
                 from /usr/include/mpich-x86_64/petsc/petscvec.h:9,
                 from /usr/include/mpich-x86_64/petsc/petscmat.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscpc.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscis.h:7,
                 from /usr/include/mpich-x86_64/petsc/petscvec.h:9,
                 from /usr/include/mpich-x86_64/petsc/petscmat.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscpc.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-cyclic.cxx
  Compiling  shiftedmetric.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fci.cxx
  Compiling  laplacexz-petsc.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  identity.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromoptions.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fft_fftw.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromfile.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lapack_routines.cxx
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  physicsmodel.cxx
  Compiling  bilinear.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/bout.hxx:40,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/bout.hxx:40,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  smoothing.cxx
  Compiling  hermite_spline.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sourcex.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  monotonic_hermite_spline.cxx
  Compiling  gyro_average.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, BoutReal, int)':
gyro_average.cxx:170:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  170 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field2D&, int)':
gyro_average.cxx:187:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  187 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field3D&, int)':
gyro_average.cxx:194:37: warning: 'Field3D gyroPade0(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  194 |   return gyroPade0(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:175:9: note: declared here
  175 | Field3D gyroPade0(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, BoutReal, int)':
gyro_average.cxx:209:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  209 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field2D&, int)':
gyro_average.cxx:226:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  226 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field3D&, int)':
gyro_average.cxx:232:37: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  232 |   return gyroPade1(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field2D gyroPade1(const Field2D&, const Field2D&, int)':
gyro_average.cxx:238:34: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  238 |   tmp = gyroPade1(tmp, rho, flags);
      |                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, BoutReal, int)':
gyro_average.cxx:243:53: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:243:66: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field2D&, int)':
gyro_average.cxx:251:53: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:251:66: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field3D&, int)':
gyro_average.cxx:260:37: warning: 'Field3D gyroPade2(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  260 |   return gyroPade2(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:250:9: note: declared here
  250 | Field3D gyroPade2(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
  Compiling  snb.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lagrange_4pt.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  arkode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  difops.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh.cxx
  Compiling  ida.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  petsc.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
petsc.cxx: In function 'PetscErrorCode PetscMonitor(TS, PetscInt, PetscReal, Vec, void*)':
petsc.cxx:859:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |     ^~
In file included from /usr/include/mpich-x86_64/petsc/petscsys.h:1362,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/mpich-x86_64/petsc/petscerror.h:464:32: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  464 | #define CHKERRQ(ierr)          do {PetscErrorCode ierr__ = (ierr); if (PetscUnlikely(ierr__)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,ierr__,PETSC_ERROR_REPEAT," ");} while (0)
      |                                ^~
petsc.cxx:859:79: note: in expansion of macro 'CHKERRQ'
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |                                                                               ^~~~~~~
  Compiling  boundary_standard.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  snes.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from snes.hxx:38,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from snes.hxx:38,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  imex-bdf2.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  power.cxx
  Compiling  boundary_region.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from power.hxx:33,
                 from power.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from power.hxx:33,
                 from power.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  meshfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  slepc.cxx
  Compiling  karniadakis.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  surfaceiter.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4.cxx
  Compiling  coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  euler.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from euler.hxx:36,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from euler.hxx:36,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk3-ssp.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  index_derivs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf45.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cashkarp.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4simple.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf34.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkgeneric.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkscheme.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkschemefactory.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  split-rk.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solverfactory.cxx
In file included from impls/pvode/pvode.hxx:37,
                 from solverfactory.cxx:11:
../../include/pvode/nvector.h:93: warning: "PVEC_REAL_MPI_TYPE" redefined
   93 | #define PVEC_REAL_MPI_TYPE MPI_DOUBLE
      | 
In file included from /usr/include/mpich-x86_64/nvector/nvector_parallel.h:44,
                 from impls/arkode/arkode.hxx:47,
                 from solverfactory.cxx:3:
/usr/include/mpich-x86_64/sundials/sundials_mpi_types.h:38: note: this is the location of the previous definition
   38 | #define PVEC_REAL_MPI_TYPE    MPI_SUNREALTYPE
      | 
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parallel_boundary_region.cxx
  Compiling  parallel_boundary_op.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_ini.cxx
  Compiling  fv_ops.cxx
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/bout/../msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_netcdf.cxx
  Compiling  bout_types.cxx
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from options_netcdf.cxx:7:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  boutexception.cxx
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from boutexception.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from boutexception.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  derivs.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  msg_stack.cxx
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  output.cxx
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  utils.cxx
  Compiling  optionsreader.cxx
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutcomm.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  timer.cxx
  Compiling  range.cxx
  Compiling  petsclib.cxx
  Compiling  expressionparser.cxx
  Compiling  slepclib.cxx
  Compiling  type_name.cxx
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout++.cxx
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
Recreating libbout++.a
make -C tools/pylib python3
Creating libbout++.so
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib'
PY=python3 make -C _boutcore_build pseudoinstall
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build'
  Generating boutcore.pyx
  Generating setup.py
  Generating helper.cxx
  Generating helper.h
  Generating resolve_enum.pxd
yes - <int>deflt
yes - <int>centre
yes - <int>xlow
yes - <int>ylow
yes - <int>zlow
yes - <int>vshift
yes - <int>deflt
yes - <int>u1
yes - <int>u2
yes - <int>c2
yes - <int>w2
yes - <int>w3
yes - <int>c4
yes - <int>u3
yes - <int>fft
yes - <int>split
yes - <int>s2
yes - <int>all
yes - <int>nobndry
yes - <int>nox
yes - <int>noy
yes - <int>noz
yes - <int>X
yes - <int>Y
yes - <int>Z
yes - <int>YAligned
yes - <int>YOrthogonal
yes - <int>Standard
yes - <int>Aligned
yes - <int>Standard
yes - <int>Average
yes - <int>C2L
yes - <int>L2C
yes - <int>Standard
yes - <int>StandardSecond
yes - <int>StandardFourth
yes - <int>Upwind
yes - <int>Flux
yes - <int>standard
yes - <int>simple
yes - <int>arakawa
yes - <int>ctu
yes - <int>arakawa_old
  Generating boutcpp.pxd
/usr/lib64/python3.9/distutils/extension.py:131: UserWarning: Unknown Extension options: 'language_level'
  warnings.warn(msg)
/usr/lib64/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build/boutcore.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
warning: resolve_enum.pxd:49:25: 'deflt' redeclared 
warning: resolve_enum.pxd:189:28: 'Standard' redeclared 
warning: resolve_enum.pxd:223:19: 'Standard' redeclared 
Compiling boutcore.pyx because it changed.
[1/1] Cythonizing boutcore.pyx
running build_ext
building 'boutcore' extension
creating build
creating build/temp.linux-x86_64-3.9
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c boutcore.cpp -o build/temp.linux-x86_64-3.9/boutcore.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from boutcore.cpp:902:
/usr/lib64/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_6DDX(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37690:96: warning: ‘Field3D DDX(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37690 |     __pyx_t_6 = DDX((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:95:34: note: declared here
   95 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDX, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_8D2DX2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37980:98: warning: ‘Field3D D2DX2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37980 |     __pyx_t_6 = D2DX2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:225:34: note: declared here
  225 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DX2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_10VDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38282:126: warning: ‘Field3D VDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38282 |     __pyx_t_6 = VDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:420:35: note: declared here
  420 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_12FDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38584:126: warning: ‘Field3D FDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38584 |     __pyx_t_6 = FDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:539:35: note: declared here
  539 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_14DDY(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38874:96: warning: ‘Field3D DDY(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38874 |     __pyx_t_6 = DDY((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:127:34: note: declared here
  127 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDY, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_16D2DY2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39164:98: warning: ‘Field3D D2DY2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39164 |     __pyx_t_6 = D2DY2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:257:34: note: declared here
  257 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DY2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_18VDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39466:126: warning: ‘Field3D VDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39466 |     __pyx_t_6 = VDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:454:35: note: declared here
  454 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_20FDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39768:126: warning: ‘Field3D FDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39768 |     __pyx_t_6 = FDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:573:35: note: declared here
  573 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_22DDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40058:96: warning: ‘Field3D DDZ(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40058 |     __pyx_t_6 = DDZ((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:159:34: note: declared here
  159 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDZ, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_24D2DZ2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40348:98: warning: ‘Field3D D2DZ2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40348 |     __pyx_t_6 = D2DZ2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:289:34: note: declared here
  289 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DZ2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_26VDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40650:126: warning: ‘Field3D VDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40650 |     __pyx_t_6 = VDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:488:35: note: declared here
  488 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_28FDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40952:126: warning: ‘Field3D FDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40952 |     __pyx_t_6 = FDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:607:35: note: declared here
  607 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: At global scope:
boutcore.cpp:25004:45: warning: ‘__pyx_obj_8boutcore_Vector2D* __pyx_f_8boutcore_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
25004 | static struct __pyx_obj_8boutcore_Vector2D *__pyx_f_8boutcore_v2dFromObj(Vector2D __pyx_v_i) {
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
boutcore.cpp:49221:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
49221 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_region(_object*)’:
boutcore.cpp:50045:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
50045 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_pw_8boutcore_45bracket(_object*, _object*, _object*)’:
boutcore.cpp:42619:141: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
42619 |   __pyx_t_1 = ((PyObject *)__pyx_f_8boutcore_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2569, __pyx_L1_error)
      |                                                                                                                                             ^
boutcore.cpp:50732:18: note: ‘__pyx_r’ was declared here
50732 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c boutexception_helper.cxx -o build/temp.linux-x86_64-3.9/boutexception_helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c helper.cxx -o build/temp.linux-x86_64-3.9/helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
mpic++ -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.9/boutcore.o build/temp.linux-x86_64-3.9/boutexception_helper.o build/temp.linux-x86_64-3.9/helper.o -L/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib -L/usr/lib64 -L/usr/lib64 -L/usr/lib64/mpich/lib -L/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib -L/usr/lib64 -lm -lbout++ -ldl -lm -lfftw3 -lnetcdf_c++4 -lnetcdf -lhdf5_hl -lhdf5 -lhdf5_hl -lsz -lz -ldl -lm -lpetsc -lsundials_ida -lsundials_nvecparallel -lsundials_cvode -lsundials_nvecparallel -lsundials_arkode -lsundials_nvecparallel -lpvode -lpvpre -o /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build/boutcore.cpython-39-x86_64-linux-gnu.so -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
cp boutcore*.so ..
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build'
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib'
++ pwd
+ export LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ make -j2 -C manual html
make: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual'
cd doxygen && doxygen Doxyfile
warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1056 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 2149 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2171 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Doxygen version used: 1.9.1
Notice: Output directory 'bout' does not exist. I have created it for you.
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Reading /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/field/gen_fieldops.py...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/mumps_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/mumps_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/naulin_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/naulin_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/pdd.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/pdd.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/serial_tri.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/spt/spt.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/laplacefactory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/laplacefactory.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexy/laplacexy.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/laplacexz.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/cyclic.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/cyclic.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/parderiv_factory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/parderiv_factory.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_region.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_standard.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/gridfromfile.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/gridfromoptions.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/fv_ops.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/bilinear.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/hermite_spline.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/interpolation_factory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/lagrange_4pt.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/monotonic_hermite_spline.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/mesh.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/fci.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/fci.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/identity.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/shiftedmetric.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel_boundary_op.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel_boundary_region.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/surfaceiter.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/physicsmodel.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/smoothing.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/snb.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/sourcex.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/arkode/arkode.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/imex-bdf2.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/karniadakis/karniadakis.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/rk3-ssp.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkscheme.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkscheme.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solver.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solver.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solverfactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solverfactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/bout_types.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/bout_types.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutcomm.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutcomm.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutexception.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutexception.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/derivs.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/derivs.cxx...
Preprocessing /bui/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:1: warning: the name 'Base' supplied as the argument in the \file statement is not an input file
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:347: warning: no uniquely matching class member found for 
  const vector< int > NcFormat::getSize(const string &var)
Possible candidates:
  'const std::vector< int > NcFormat::getSize(const char *var) override' at line 77 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'const std::vector< int > NcFormat::getSize(const std::string &var) override' at line 78 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:558: warning: no uniquely matching class member found for 
  bool NcFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:599: warning: no uniquely matching class member found for 
  bool NcFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:677: warning: no uniquely matching class member found for 
  bool NcFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:739: warning: no uniquely matching class member found for 
  bool NcFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:841: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:882: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:964: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:1039: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:295: warning: no uniquely matching class member found for 
  bool PncFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:354: warning: no uniquely matching class member found for 
  bool PncFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:402: warning: no uniquely matching class member found for 
  bool PncFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:488: warning: no uniquely matching class member found for 
  bool PncFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:524: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:556: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:605: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:681: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:80: warning: no uniquely matching class member found for 
  BoundaryOpBase * BoundaryFactory::create(const string &name, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::create(const std::string &name, BoundaryRegionBase *region)' at line 70 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'BoundaryOpBase * BoundaryFactory::create(const char *name, BoundaryRegionBase *region)' at line 71 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:210: warning: no matching class member found for 
  BoundaryOpBase * BoundaryFactory::createFromOptions(const string &varname, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const std::string &varname, BoundaryRegionBase *region)'
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const char *varname, BoundaryRegionBase *region)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:313: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOp *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:326: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOpPar *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:339: warning: no matching class member found for 
  void BoundaryFactory::addMod(BoundaryModifier *bmod, const string &name)
Possible candidates:
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const std::string &name)'
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const char *name)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1229: warning: no matching class member found for 
  Field2D Coordinates::DDZ(const MAYBE_UNUSED(Field2D &f), CELL_LOC loc, const std::string &method, const std::string &region)
Possible candidates:
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, const std::string &method, REGION region)'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method, REGION region=RGN_NOBNDRY)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1244: warning: no matching class member found for 
  Field2D Coordinates::Grad_par(const Field2D &var, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Grad_par(const Field2D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Grad_par(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Grad_par(const Field3D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Grad_par(const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1265: warning: no matching class member found for 
  Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx:59: warning: no matching class member found for 
  STAGGER Mesh::getStagger(CELL_LOC vloc, MAYBE_UNUSED(CELL_LOC inloc), const CELL_LOC outloc, const CELL_LOC allowedStaggerLoc) const
Possible candidates:
  'STAGGER Mesh::getStagger(const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
  'STAGGER Mesh::getStagger(const CELL_LOC vloc, const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
lddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/expressionparser.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/expressionparser.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/msg_stack.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/msg_stack.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/optionparser.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/optionparser.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_netcdf.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_netcdf.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/optionsreader.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/optionsreader.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/output.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/output.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/petsclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/petsclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/range.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/range.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/slepclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/slepclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/timer.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/timer.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/type_name.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/type_name.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/utils.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/utils.cxx...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data strucsh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
tures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating file documentation...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_op.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_standard.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/array.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/assert.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/constants.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/coordinates.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/deprecated.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/deriv_store.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/expr.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/field_visitor.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/fieldgroup.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/format.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/fv_ops.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/globalfield.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/laplacexy.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/laplacexz.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invertable_operator.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/macro_for_each.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/monitor.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/openmpwrap.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/petsclib.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/physicsmodel.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/rkscheme.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/rvec.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/scorepwrapper.hxx...
Generat/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
ing docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/slepclib.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/snb.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/solver.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/solverfactory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/expressionparser.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/gettext.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/range.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/timer.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/type_name.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/uncopyable.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/template_combinations.hxx...
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Generating docs for file /builddir/build/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_standard.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/fv_ops.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/bilinear.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/hermite_spline.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/interpolation_factory.cxx./builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
..
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/lagrange_4pt.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/imex-bdf2.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
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OUT++-v4.3.2/build_mpich/src/sys/range.cxx...
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Generating docs for compound Da/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
taFormat...
Generating docs for compound DeferredFunction...
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Generating/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
 docs for compound LegacyModel...
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Generating docs for nested compound Options::AttributeType...
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Generating docs for compound OptionsReader...
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Generating docs for compound ParallelTransform...
Generating docs for compound ParallelTransformIdentity...
Generating docs for compound ParDerivFactory...
Generating docs for compound ParseException...
Generating docs for compound PetscLib...
Generating docs for compound PetscSolver...
Generating docs for compound PhysicsModel...
Generating docs for nested compound PhysicsModel::PhysicsModelMonitor...
Generating docs for compound PncFormat...
Generating docs for compound Power...
Generating docs for compound PowerSolver...
Generating docs for compound produceCombinations...
Generating docs for compound PromoteType...
Generating docs for compound PvodeSolver...
Generating docs for compound RangeIterator...
Generating docs for compound Region...
Generating docs for compound RegionStats...
Generating docs for compound RegisterInFactory...
Generating docs for compound RegisterInFactory< Solver, DerivedType >...
Generating docs for compound registerMethod...
Generating docs for compound RK3SSP...
Generating docs for compound RK4SIMPLEScheme...
Generating docs for compound RK4Solver...
Generating docs for compound RKF34Scheme...
Generating docs for compound RKF45Scheme...
Generating docs for compound RKGenericSolver...
Generating docs for compound RKScheme...
Generating docs for compound RKSchemeFactory...
Generating docs for compound RunMetrics...
Generating docs for compound SaveDerivsOp...
Generating docs for compound SaveVarOp...
Generating docs for compound Set...
Generating docs for compound ShiftedMetric...
Generating docs for nested compound ShiftedMetric::ParallelSlicePhase...
Generating docs for compound SlepcLib...
Generating docs for compound SlepcSolver...
Generating docs for compound snes_info...
Generating docs for compound SNESSolver...
Generating docs for compound Solver...
Generating docs for nested compound Solver::VarStr...
Generating docs for compound SolverFactory...
Generating docs for compound SpecificInd...
Generating docs for compound SplitFluxDerivativeType...
Generating docs for compound SplitRK...
Generating docs for compound stencil...
Generating docs for compound Subtract...
Generating docs for compound SurfaceIter...
Generating docs for compound Tensor...
Generating docs for compound Timer...
Generating docs for nested compound Timer::timer_info...
Generating docs for compound TypeContainer...
Generating docs for compound Uncopyable...
Generating docs for compound Vector2D...
Generating docs for compound Vector3D...
Generating namespace index...
Generating docs for namespace bout
Generating docs for compound bout::HeatFluxSNB...
Generating docs for namespace bout::derivatives
Generating docs for namespace bout::derivatives::index
Generating docs for namespace bout::experimental
Generating docs for compound bout::experimental::CommandLineArgs...
Generating docs for compound bout::exp/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/array.hxx:385: warning: Unsupported xml/html tag <size> found
erimental::OptionsNetCDF...
Generating docs for namespace bout::fft
Generating docs for namespace bout::globals
Generating docs for namespace bout::inversion
Generating docs for compound bout::inversion::InvertableOperator...
Generating docs for namespace bout::utils
Generating docs for compound bout::utils::_Unique_if...
Generating docs for compound bout::utils::_Unique_if< T[]>...
Generating docs for compound bout::utils::_Unique_if< T[N]>...
Generating docs for compound bout::utils::function_traits...
Generating docs for compound bout::utils::function_traits< R(*)(Args...)>...
Generating docs for nested compound bout::utils::function_traits< R(*)(Args...)>::arg...
Generating docs for namespace bout::utils::details
Generating docs for compound bout::utils::details::CompareTypes...
Generating docs for compound bout::utils::details::CompareTypes< T, T >...
Generating docs for compound bout::utils::details::IsEqual...
Generating docs for compound bout::utils::details::StaticCastOrThrow...
Generating docs for compound bout::utils::details::ToString...
Generating docs for namespace FV
Generating docs for compound FV::Stencil1D...
Generating docs for compound FV::Upwind...
Generating docs for compound FV::Fromm...
Generating docs for compound FV::MinMod...
Generating docs for compound FV::MC...
Generating docs for namespace gen_fieldops
Generating docs for compound gen_fieldops::Field...
Generating docs for namespace pvode
Generating docs for compound pvode::bandmat_type...
Generating docs for compound pvode::CVodeMemRec...
Generating docs for compound pvode::machenv_type...
Generating docs for compound pvode::nvec_type...
Generating docs for compound pvode::pvbbddata_type...
Generating docs for compound pvode::SpgmrMemRec...
Generating docs for namespace SI
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating XML output...
Generating XML output for class bout::utils::_Unique_if
Generating XML output for class bout::utils::_Unique_if< T[]>
Generating XML output for class bout::utils::_Unique_if< T[N]>
Generating XML output for class Add
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>::arg
Generating XML output for class ArkodeSolver
Generating XML output for class Array
Generating XML output for class ArrayData
Generating XML output for class asExpr
Generating XML output for class asExpr< double >
Generating XML output for class asExpr< Field3D >
Generating XML output for class asExpr< float >
Generating XML output for class asExpr< int >
Generating XML output for class Options::AttributeType
Generating XML output for class pvode::bandmat_type
Generating XML output for class Bilinear
Generating XML output for class BinaryExpr
Generating XML output for class BinaryResult
Generating XML output for class BoundaryConstGradient
Generating XML output for class BoundaryConstLaplace
Generating XML output for class BoundaryDirichlet
Generating XML output for class BoundaryDirichlet_2ndOrder
Generating XML output for class BoundaryDirichlet_4thOrder
Generating XML output for class BoundaryDirichlet_O3
Generating XML output for class BoundaryDirichlet_O4
Generating XML output for class BoundaryDivCurl
Generating XML output for class BoundaryFactory
Generating XML output for class BoundaryFree
Generating XML output for class BoundaryFree_O2
Generating XML output for class BoundaryFree_O3
Generating XML output for class BoundaryFromFieldAligned
Generating XML output for class BoundaryModifier
Generating XML output for class BoundaryNeumann
Generating XML output for class BoundaryNeumann2
Generating XML output for class BoundaryNeumann_2ndOrder
Generating XML output for /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
class BoundaryNeumann_4thOrder
Generating XML output for class BoundaryNeumann_NonOrthogonal
Generating XML output for class BoundaryNeumann_O4
Generating XML output for class BoundaryNeumannPar
Generating XML output for class BoundaryOp
Generating XML output for class BoundaryOpBase
Generating XML output for class BoundaryOpPar
Generating XML output for class BoundaryOpPar_dirichlet
Generating XML output for class BoundaryOpPar_dirichlet_interp
Generating XML output for class BoundaryOpPar_dirichlet_O3
Generating XML output for class BoundaryOpPar_neumann
Generating XML output for class BoundaryRegion
Generating XML output for class BoundaryRegionBase
Generating XML output for class BoundaryRegionPar
Generating XML output for class BoundaryRegionXIn
Generating XML output for class BoundaryRegionXOut
Generating XML output for class BoundaryRegionYDown
Generating XML output for class BoundaryRegionYUp
Generating XML output for class BoundaryRelax
Generating XML output for class BoundaryRobin
Generating XML output for class BoundaryToFieldAligned
Generating XML output for class BoundaryWidth
Generating XML output for class BoundaryZeroLaplace
Generating XML output for class BoundaryZeroLaplace2
Generating XML output for class BoutComm
Generating XML output for class BoutException
Generating XML output for class BoutIterationFail
Generating XML output for class BoutMask
Generating XML output for class BoutMesh
Generating XML output for class BoutMonitor
Generating XML output for class BoutRhsFail
Generating XML output for class CASHKARPScheme
Generating XML output for class bout::experimental::CommandLineArgs
Generating XML output for class BoutMesh::CommHandle
Generating XML output for class bout::utils::details::CompareTypes
Generating XML output for class bout::utils::details::CompareTypes< T, T >
Generating XML output for class ConditionalOutput
Generating XML output for class Coordinates
Generating XML output for class pvode::CVodeMemRec
Generating XML output for class CvodeSolver
Generating XML output for class CyclicReduce
Generating XML output for class Datafile
Generating XML output for class DataFormat
Generating XML output for class DeferredFunction
Generating XML output for class DerivativeStore
Generating XML output for class DerivativeType
Generating XML output for class DirectionTypes
Generating XML output for class Divide
Generating XML output for class DummyOutput
Generating XML output for class EmptyFormat
Generating XML output for class enumWrapper
Generating XML output for class EulerSolver
Generating XML output for class ExpressionParser
Generating XML output for class exprTraits
Generating XML output for class exprTraits< double >
Generating XML output for class exprTraits< float >
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Generating XML output for class Factory
Generating XML output for class FCIMap
Generating XML output for class FCITransform
Generating XML output for class fcmplx
Generating XML output for class Field
Generating XML output for class gen_fieldops::Field
Generating XML output for class Field2D
Generating XML output for class Field2DExpr
Generating XML output for class Field3D
Generating XML output for class Field3DExpr
Generating XML output for class FieldAbs
Generating XML output for class FieldATan
Generating XML output for class FieldBallooning
Generating XML output for class FieldBinary
Generating XML output for class FieldCos
Generating XML output for class FieldCosh
Generating XML output for class FieldData
Generating XML output for class FieldErf
Generating XML output for class FieldFactory
Generating XML output for class FieldFunction
Generating XML output for class FieldGaussian
Generating XML output for class FieldGenerator
Generating XML output for class FieldGenOneArg
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Generating XML output for class FieldGroup
Generating XML output for class FieldHeaviside
Generating XML output for class FieldMax
Generating XML output for class FieldMin
Generating XML output for class FieldMixmode
Generating XML output for class FieldNu/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
ll
Generating XML output for class FieldPerp
Generating XML output for class FieldRound
Generating XML output for class FieldSin
Generating XML output for class FieldSinh
Generating XML output for class FieldSqrt
Generating XML output for class FieldTanh
Generating XML output for class FieldTanhHat
Generating XML output for class FieldValue
Generating XML output for class FieldValuePtr
Generating XML output for class FieldVisitor
Generating XML output for class FormatFactory
Generating XML output for class FV::Fromm
Generating XML output for class bout::utils::function_traits
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>
Generating XML output for class GlobalField
Generating XML output for class GlobalField2D
Generating XML output for class GlobalField3D
Generating XML output for class GridDataSource
Generating XML output for class GridFile
Generating XML output for class GridFromOptions
Generating XML output for class H5Format
Generating XML output for class bout::HeatFluxSNB
Generating XML output for class HermiteSpline
Generating XML output for class IdaSolver
Generating XML output for class IMEXBDF2
Generating XML output for class BoundaryRegionPar::IndexPoint
Generating XML output for class BoundaryRegionPar::Indices
Generating XML output for class Interpolation
Generating XML output for class InterpolationFactory
Generating XML output for class bout::inversion::InvertableOperator
Generating XML output for class InvertPar
Generating XML output for class InvertParCR
Generating XML output for class bout::utils::details::IsEqual
Generating XML output for class KarniadakisSolver
Generating XML output for class Lagrange4pt
Generating XML output for class LaplaceCyclic
Generating XML output for class LaplaceFactory
Generating XML output for class LaplaceMultigrid
Generating XML output for class LaplaceMumps
Generating XML output for class LaplaceNaulin
Generating XML output for class LaplacePDD
Generating XML output for class LaplacePetsc
Generating XML output for class LaplaceSerialBand
Generating XML output for class LaplaceSerialTri
Generating XML output for class LaplaceShoot
Generating XML output for class LaplaceSPT
Generating XML output for class LaplaceXY
Generating XML output for class LaplaceXZ
Generating XML output for class LaplaceXZcyclic
Generating XML output for class LaplaceXZpetsc
Generating XML output for class Laplacian
Generating XML output for class LegacyModel
Generating XML output for class ExpressionParser::LexInfo
Generating XML output for class Literal
Generating XML output for class LoadVarOp
Generating XML output for class pvode::machenv_type
Generating XML output for class Matrix
Generating XML output for class FV::MC
Generating XML output for class Mesh
Generating XML output for class MeshFactory
Generating XML output for class metaData
Generating XML output for class FV::MinMod
Generating XML output for class Monitor
Generating XML output for class MonotonicHermiteSpline
Generating XML output for class MsgStack
Generating XML output for class MsgStackItem
Generating XML output for class Multigrid1DP
Generating XML output for class Multigrid2DPf1D
Generating XML output for class MultigridAlg
Generating XML output for class MultigridSerial
Generating XML output for class multiostream
Generating XML output for class multioutbuf
Generating XML output for class multioutbuf_init
Generating XML output for class Multiply
Generating XML output for class NcFormat
Generating XML output for class Ncxx4
Generating XML output for class pvode::nvec_type
Generating XML output for class OptionINI
Generating XML output for class OptionParser
Generating XML output for class Options
Generating XML output for class bout::experimental::OptionsNetCDF
Generating XML output for class OptionsReader
Generating XML output for class Options::OptionValue
Generating XML output for class Output
Generating XML output for class ShiftedMetric::ParallelSlicePhase
Generating XML output for class ParallelTransform
Generating XML output for class ParallelTransformIdentity
Generating XML output for c/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
lass ParDerivFactory
Generating XML output for class ParseException
Generating XML output for class LaplacePDD::PDD_data
Generating XML output for class PetscLib
Generating XML output for class PetscSolver
Generating XML output for class PhysicsModel
Generating XML output for class PhysicsModel::PhysicsModelMonitor
Generating XML output for class PncFormat
Generating XML output for class Power
Generating XML output for class PowerSolver
Generating XML output for class produceCombinations
Generating XML output for class PromoteType
Generating XML output for class pvode::pvbbddata_type
Generating XML output for class PvodeSolver
Generating XML output for class RangeIterator
Generating XML output for class BoundaryRegionPar::RealPoint
Generating XML output for class Region
Generating XML output for class RegionStats
Generating XML output for class RegisterInFactory
Generating XML output for class RegisterInFactory< Solver, DerivedType >
Generating XML output for class registerMethod
Generating XML output for class RK3SSP
Generating XML output for class RK4SIMPLEScheme
Generating XML output for class RK4Solver
Generating XML output for class RKF34Scheme
Generating XML output for class RKF45Scheme
Generating XML output for class RKGenericSolver
Generating XML output for class RKScheme
Generating XML output for class RKSchemeFactory
Generating XML output for class RunMetrics
Generating XML output for class SaveDerivsOp
Generating XML output for class SaveVarOp
Generating XML output for class Set
Generating XML output for class ShiftedMetric
Generating XML output for class SlepcLib
Generating XML output for class SlepcSolver
Generating XML output for class snes_info
Generating XML output for class SNESSolver
Generating XML output for class Solver
Generating XML output for class SolverFactory
Generating XML output for class SpecificInd
Generating XML output for class pvode::SpgmrMemRec
Generating XML output for class SplitFluxDerivativeType
Generating XML output for class SplitRK
Generating XML output for class LaplaceSPT::SPT_data
Generating XML output for class bout::utils::details::StaticCastOrThrow
Generating XML output for class stencil
Generating XML output for class FV::Stencil1D
Generating XML output for class Subtract
Generating XML output for class SurfaceIter
Generating XML output for class Tensor
Generating XML output for class Timer
Generating XML output for class Timer::timer_info
Generating XML output for class bout::utils::details::ToString
Generating XML output for class TypeContainer
Generating XML output for class Uncopyable
Generating XML output for class FV::Upwind
Generating XML output for class Datafile::VarStr
Generating XML output for class Solver::VarStr
Generating XML output for class Vector2D
Generating XML output for class Vector3D
Generating XML output for class LaplaceXZpetsc::YSlice
Generating XML output for namespace @106
Generating XML output for namespace @107
Generating XML output for namespace @175
Generating XML output for namespace @176
Generating XML output for namespace @177
Generating XML output for namespace @189
Generating XML output for namespace @205
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Generating XML output for namespace @209
Generating XML output for namespace @211
Generating XML output for namespace @213
Generating XML output for namespace @215
Generating XML output for namespace @217
Generating XML output for namespace @219
Generating XML output for namespace @221
Generating XML output for namespace @223
Generating XML output for namespace @225
Generating XML output for namespace @235
Generating XML output for namespace @240
Generating XML output for namespace @242
Generating XML output for namespace @244
Generating XML output for namespace @247
Generating XML output for namespace @251
Generating XML output for namespace @256
Generating XML output for namespace @4
Generating XML output for namespace bout
Generating XML output for namespace bout::derivatives
Generating XML output for namespace bout::derivatives::index
Generating XML output for namespace bout::experimental
Gene/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
rating XML output for namespace bout::fft
Generating XML output for namespace bout::globals
Generating XML output for namespace bout::inversion
Generating XML output for namespace bout::utils
Generating XML output for namespace bout::utils::details
Generating XML output for namespace FV
Generating XML output for namespace gen_fieldops
Generating XML output for namespace netCDF
Generating XML output for namespace pvode
Generating XML output for namespace SI
Generating XML output for namespace std
Generating XML output for file boundary_factory.hxx
Generating XML output for file boundary_op.hxx
Generating XML output for file boundary_region.hxx
Generating XML output for file boundary_standard.hxx
Generating XML output for file bout.hxx
Generating XML output for file array.hxx
Generating XML output for file assert.hxx
Generating XML output for file constants.hxx
Generating XML output for file coordinates.hxx
Generating XML output for file deprecated.hxx
Generating XML output for file deriv_store.hxx
Generating XML output for file expr.hxx
Generating XML output for file field_visitor.hxx
Generating XML output for file fieldgroup.hxx
Generating XML output for file format.hxx
Generating XML output for file fv_ops.hxx
Generating XML output for file generic_factory.hxx
Generating XML output for file globalfield.hxx
Generating XML output for file griddata.hxx
Generating XML output for file index_derivs.hxx
Generating XML output for file index_derivs_interface.hxx
Generating XML output for file laplacexy.hxx
Generating XML output for file laplacexz.hxx
Generating XML output for file invertable_operator.hxx
Generating XML output for file macro_for_each.hxx
Generating XML output for file mesh.hxx
Generating XML output for file monitor.hxx
Generating XML output for file openmpwrap.hxx
Generating XML output for file paralleltransform.hxx
Generating XML output for file petsclib.hxx
Generating XML output for file physicsmodel.hxx
Generating XML output for file region.hxx
Generating XML output for file rkscheme.hxx
Generating XML output for file rvec.hxx
Generating XML output for file scorepwrapper.hxx
Generating XML output for file slepclib.hxx
Generating XML output for file snb.hxx
Generating XML output for file solver.hxx
Generating XML output for file solverfactory.hxx
Generating XML output for file surfaceiter.hxx
Generating XML output for file expressionparser.hxx
Generating XML output for file gettext.hxx
Generating XML output for file range.hxx
Generating XML output for file timer.hxx
Generating XML output for file type_name.hxx
Generating XML output for file uncopyable.hxx
Generating XML output for file variant.hxx
Generating XML output for file template_combinations.hxx
Generating XML output for file traits.hxx
Generating XML output for file bout_types.hxx
Generating XML output for file boutcomm.hxx
Generating XML output for file boutexception.hxx
Generating XML output for file boutmain.hxx
Generating XML output for file cyclic_reduction.hxx
Generating XML output for file datafile.hxx
Generating XML output for file dataformat.hxx
Generating XML output for file dcomplex.hxx
Generating XML output for file derivs.hxx
Generating XML output for file difops.hxx
Generating XML output for file fft.hxx
Generating XML output for file field.hxx
Generating XML output for file field2d.hxx
Generating XML output for file field3d.hxx
Generating XML output for file field_data.hxx
Generating XML output for file field_factory.hxx
Generating XML output for file fieldperp.hxx
Generating XML output for file globals.hxx
Generating XML output for file gyro_average.hxx
Generating XML output for file initialprofiles.hxx
Generating XML output for file interpolation.hxx
Generating XML output for file interpolation_factory.hxx
Generating XML output for file invert_laplace.hxx
Generating XML output for file invert_parderiv.hxx
Generating XML output for file lapack_routines.hxx
Generating XML output for file mask.hxx
Generating XML output for file msg_stack.hxx
Generating XML output for file multiostream.hxx
Generating XML output for file options.hxx
Generating XML output for file options_netcdf.hxx
Generating XML output for file optionsreader.hxx
Generating XML output for file output.hxx
Generating XML output for file parallel_boundary_op.hxx
Generating XML output for file parallel_boundary_region.hxx
Generating XML output for file band.h
Generating XML output for file cvdiag.h
Generating XML output for file cvode.h
Generating XML output for file cvspgmr.h
Generating XML output for file iterativ.h
Generating XML output for file llnlmath.h
Generating XML output for file llnltyps.h
Generating XML output for file nvector.h
Generating XML output for file pvbbdpre.h
Generating XML output for file smalldense.h
Generating XML output for file spgmr.h
Generating XML output for file vector.h
Generating XML output for file smoothing.hxx
Generating XML output for file sourcex.hxx
Generating XML output for file stencils.hxx
Generating XML output for file unused.hxx
Generating XML output for file utils.hxx
Generating XML output for file vecops.hxx
Generating XML output for file vector2d.hxx
Generating XML output for file vector3d.hxx
Generating XML output for file where.hxx
Generating XML output for file bout++.cxx
Generating XML output for file field.cxx
Generating XML output for file field2d.cxx
Generating XML output for file field3d.cxx
Generating XML output for file field_data.cxx
Generating XML output for file field_factory.cxx
Generating XML output for file fieldgenerators.cxx
Generating XML output for file fieldgenerators.hxx
Generating XML output for file fieldgroup.cxx
Generating XML output for file fieldperp.cxx
Generating XML output for file gen_fieldops.py
Generating XML output for file generated_fieldops.cxx
Generating XML output for file globalfield.cxx
Generating XML output for file initialprofiles.cxx
Generating XML output for file vecops.cxx
Generating XML output for file vector2d.cxx
Generating XML output for file vector3d.cxx
Generating XML output for file where.cxx
Generating XML output for file datafile.cxx
Generating XML output for file dataformat.cxx
Generating XML output for file formatfactory.cxx
Generating XML output for file formatfactory.hxx
Generating XML output for file emptyformat.hxx
Generating XML output for file h5_format.cxx
Generating XML output for file h5_format.hxx
Generating XML output for file nc_format.cxx
Generating XML output for file nc_format.hxx
Generating XML output for file ncxx4.cxx
Generating XML output for file ncxx4.hxx
Generating XML output for file pnetcdf.cxx
Generating XML output for file pnetcdf.hxx
Generating XML output for file fft_fftw.cxx
Generating XML output for file lapack_routines.cxx
Generating XML output for file cyclic_laplace.cxx
Generating XML output for file cyclic_laplace.hxx
Generating XML output for file multigrid_alg.cxx
Generating XML output for file multigrid_laplace.cxx
Generating XML output for file multigrid_laplace.hxx
Generating XML output for file multigrid_solver.cxx
Generating XML output for file mumps_laplace.cxx
Generating XML output for file mumps_laplace.hxx
Generating XML output for file naulin_laplace.cxx
Generating XML output for file naulin_laplace.hxx
Generating XML output for file pdd.cxx
Generating XML output for file pdd.hxx
Generating XML output for file petsc_laplace.cxx
Generating XML output for file petsc_laplace.hxx
Generating XML output for file serial_band.cxx
Generating XML output for file serial_band.hxx
Generating XML output for file serial_tri.cxx
Generating XML output for file serial_tri.hxx
Generating XML output for file shoot_laplace.cxx
Generating XML output for file shoot_laplace.hxx
Generating XML output for file spt.cxx
Generating XML output for file spt.hxx
Generating XML output for file invert_laplace.cxx
Generating XML output for file laplacefactory.cxx
Generating XML output for file laplacefactory.hxx
Generating XML output for file laplacexy.cxx
Generating XML output for file laplacexz-cyclic.cxx
Generating XML output for file laplacexz-cyclic.hxx
Generating XML output for file laplacexz-petsc.cxx
Generating XML output for file laplacexz-petsc.hxx
Generating XML output/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
 for file laplacexz.cxx
Generating XML output for file cyclic.cxx
Generating XML output for file cyclic.hxx
Generating XML output for file invert_parderiv.cxx
Generating XML output for file parderiv_factory.cxx
Generating XML output for file parderiv_factory.hxx
Generating XML output for file boundary_factory.cxx
Generating XML output for file boundary_region.cxx
Generating XML output for file boundary_standard.cxx
Generating XML output for file coordinates.cxx
Generating XML output for file gridfromfile.cxx
Generating XML output for file gridfromoptions.cxx
Generating XML output for file difops.cxx
Generating XML output for file fv_ops.cxx
Generating XML output for file boutmesh.cxx
Generating XML output for file boutmesh.hxx
Generating XML output for file index_derivs.cxx
Generating XML output for file interpolation.cxx
Generating XML output for file bilinear.cxx
Generating XML output for file hermite_spline.cxx
Generating XML output for file interpolation_factory.cxx
Generating XML output for file lagrange_4pt.cxx
Generating XML output for file monotonic_hermite_spline.cxx
Generating XML output for file mesh.cxx
Generating XML output for file meshfactory.cxx
Generating XML output for file meshfactory.hxx
Generating XML output for file fci.cxx
Generating XML output for file fci.hxx
Generating XML output for file identity.cxx
Generating XML output for file shiftedmetric.cxx
Generating XML output for file parallel_boundary_op.cxx
Generating XML output for file parallel_boundary_region.cxx
Generating XML output for file surfaceiter.cxx
Generating XML output for file gyro_average.cxx
Generating XML output for file physicsmodel.cxx
Generating XML output for file smoothing.cxx
Generating XML output for file snb.cxx
Generating XML output for file sourcex.cxx
Generating XML output for file arkode.cxx
Generating XML output for file arkode.hxx
Generating XML output for file cvode.cxx
Generating XML output for file cvode.hxx
Generating XML output for file euler.cxx
Generating XML output for file euler.hxx
Generating XML output for file ida.cxx
Generating XML output for file ida.hxx
Generating XML output for file imex-bdf2.cxx
Generating XML output for file imex-bdf2.hxx
Generating XML output for file karniadakis.cxx
Generating XML output for file karniadakis.hxx
Generating XML output for file petsc.cxx
Generating XML output for file petsc.hxx
Generating XML output for file power.cxx
Generating XML output for file power.hxx
Generating XML output for file pvode.cxx
Generating XML output for file pvode.hxx
Generating XML output for file rk3-ssp.cxx
Generating XML output for file rk3-ssp.hxx
Generating XML output for file rk4.cxx
Generating XML output for file rk4.hxx
Generating XML output for file cashkarp.cxx
Generating XML output for file cashkarp.hxx
Generating XML output for file rk4simple.cxx
Generating XML output for file rk4simple.hxx
Generating XML output for file rkf34.cxx
Generating XML output for file rkf34.hxx
Generating XML output for file rkf45.cxx
Generating XML output for file rkf45.hxx
Generating XML output for file rkgeneric.cxx
Generating XML output for file rkgeneric.hxx
Generating XML output for file rkscheme.cxx
Generating XML output for file rkschemefactory.cxx
Generating XML output for file rkschemefactory.hxx
Generating XML output for file slepc.cxx
Generating XML output for file slepc.hxx
Generating XML output for file snes.cxx
Generating XML output for file snes.hxx
Generating XML output for file split-rk.cxx
Generating XML output for file split-rk.hxx
Generating XML output for file solver.cxx
Generating XML output for file solverfactory.cxx
Generating XML output for file bout_types.cxx
Generating XML output for file boutcomm.cxx
Generating XML output for file boutexception.cxx
Generating XML output for file derivs.cxx
Generating XML output for file expressionparser.cxx
Generating XML output for file msg_stack.cxx
Generating XML output for file options.cxx
Generating XML output for file optionparser.hxx
Generating XML output for file options_ini.cxx
Generating XML output for file options_ini.hxx
Generating XML output for file options_netcdf.cxx
Generating XML output for file optionsreader.cxx
Generating XML output for file output.cxx
Generating XML output for file petsclib.cxx
Generating XML output for file range.cxx
Generating XML output for file slepclib.cxx
Generating XML output for file timer.cxx
Generating XML output for file type_name.cxx
Generating XML output for file utils.cxx
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/arkode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/cvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/euler/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/field/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/ida/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/karniadakis/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexy/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/multigrid/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/power/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/spt/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/
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Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/
Generating XML output for the main page
Running plantuml with JAVA...
lookup cache used 17446/65536 hits=224989 misses=18182
finished...
PYTHONPATH=../tools/pylib:$PYTHONPATH sphinx-build-3 -b html sphinx/ html/
Running Sphinx v3.3.1
breathe module not installed
recommonmark module not installed
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 40 source files that are out of date
updating environment: [new config] 40 added, 0 changed, 0 removed
reading sources... [  2%] _apidoc/boutdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if sectionname is "root":
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if nested_sectionname is not "":
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if nested_sectionname is not "":
reading sources... [  5%] _apidoc/boututils
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if len(line) > 0 and line[0] is not '#':
No mlab available
reading sources... [  7%] _apidoc/zoidberg
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/poloidal_grid.py:32: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/rzline.py:18: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/plot.py:12: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
reading sources... [ 10%] api_reference
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reading sources... [100%] user_docs/variable_init
WARNING: missing attribute mentioned in :members: or __all__: module boutdata, attribute gen_surface
WARNING: missing attribute mentioned in :members: or __all__: module boutdata, attribute pol_slice
WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised:
No module named 'bunch'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'griddata' from module 'boutdata'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
WARNING: autodoc: failed to import module 'mms' from module 'boutdata'; the following exception was raised:
No module named 'sympy'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/restart.py:docstring of boutdata.restart.normal:55: WARNING: Footnote [1] is not referenced.
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute calculus
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute closest_line
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
looking for now-outdated files... WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute linear_regression
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute run_wrapper
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'contour' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_integrate' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'plotdata' from module 'boututils'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'plotpolslice' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised:
No module named 'bunch'
WARNING: autodoc: failed to import module 'showdata' from module 'boututils'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg:1: WARNING: duplicate object description of zoidberg, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg.make_maps:1: WARNING: duplicate object description of zoidberg.make_maps, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg.write_maps:1: WARNING: duplicate object description of zoidberg.write_maps, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:75: WARNING: Definition list ends without a blank line; unexpected unindent.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/nonlocal.rst:119: WARNING: malformed hyperlink target.
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
none found
pickling environment... done
checking consistency... done
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst: WARNING: document isn't included in any toctree
preparing documents... done
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: random-quick-start (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: ../_breathe_autogen/file/field2d_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: ../_breathe_autogen/file/field3d_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: ../_breathe_autogen/file/field__data_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: ../_breathe_autogen/file/initialprofiles_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: ../_breathe_autogen/file/vecops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:145: WARNING: unknown document: ../_breathe_autogen/file/formatfactory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:147: WARNING: unknown document: ../_breathe_autogen/file/formatfactory_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:158: WARNING: unknown document: ../_breathe_autogen/file/h5__format_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: ../_breathe_autogen/file/nc__format_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:165: WARNING: unknown document: ../_breathe_autogen/file/nc__format_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:169: WARNING: unknown document: ../_breathe_autogen/file/ncxx4_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: ../_breathe_autogen/file/ncxx4_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:180: WARNING: unknown document: ../_breathe_autogen/file/pnetcdf_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:184: WARNING: unknown document: ../_breathe_autogen/file/fft__fftw_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:184: WARNING: unknown document: ../_breathe_autogen/file/fft_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:193: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: ../_breathe_autogen/file/laplacefactory_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:205: WARNING: unknown document: ../_breathe_autogen/file/serial__tri_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: ../_breathe_autogen/file/serial__band_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:211: WARNING: unknown document: ../_breathe_autogen/file/serial__band_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:215: WARNING: unknown document: ../_breathe_autogen/file/spt_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:217: WARNING: unknown document: ../_breathe_autogen/file/spt_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:221: WARNING: unknown document: ../_breathe_autogen/file/pdd_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:223: WARNING: unknown document: ../_breathe_autogen/file/pdd_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: ../_breathe_autogen/file/invert__parderiv_8cxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: ../_breathe_autogen/file/parderiv__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: ../_breathe_autogen/file/serial_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:242: WARNING: unknown document: ../_breathe_autogen/file/serial_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:246: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:248: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:252: WARNING: unknown document: ../_breathe_autogen/file/lapack__routines_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:256: WARNING: unknown document: ../_breathe_autogen/file/boundary__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:260: WARNING: unknown document: ../_breathe_autogen/file/boundary__region_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:265: WARNING: unknown document: ../_breathe_autogen/file/boundary__standard_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: ../_breathe_autogen/file/interpolation_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:277: WARNING: unknown document: ../_breathe_autogen/file/mesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:285: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:294: WARNING: unknown document: ../_breathe_autogen/file/gyro__average_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: ../_breathe_autogen/file/smoothing_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:299: WARNING: unknown document: ../_breathe_autogen/file/sourcex_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:305: WARNING: unknown document: ../_breathe_autogen/file/solver_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:311: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:317: WARNING: unknown document: ../_breathe_autogen/file/cvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:321: WARNING: unknown document: ../_breathe_autogen/file/cvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:325: WARNING: unknown document: ../_breathe_autogen/file/ida_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:329: WARNING: unknown document: ../_breathe_autogen/file/ida_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:333: WARNING: unknown document: ../_breathe_autogen/file/petsc_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:336: WARNING: unknown document: ../_breathe_autogen/file/petsc_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:340: WARNING: unknown document: ../_breathe_autogen/file/pvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:344: WARNING: unknown document: ../_breathe_autogen/file/pvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:348: WARNING: unknown document: ../_breathe_autogen/file/boutcomm_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:350: WARNING: unknown document: ../_breathe_autogen/file/boutexception_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: undefined label: sec-derivatives (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:359: WARNING: unknown document: ../_breathe_autogen/file/msg__stack_8cxx
generating indices... /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:366: WARNING: unknown document: ../_breathe_autogen/file/options_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:370: WARNING: unknown document: ../_breathe_autogen/file/optionsreader_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:372: WARNING: unknown document: ../_breathe_autogen/file/output_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:374: WARNING: unknown document: ../_breathe_autogen/file/range_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:378: WARNING: unknown document: ../_breathe_autogen/file/stencils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:382: WARNING: unknown document: ../_breathe_autogen/file/timer_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:386: WARNING: unknown document: ../_breathe_autogen/file/utils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:392: WARNING: unknown document: ../_breathe_autogen/file/optionparser_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:394: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:396: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'mesh:maxregionblocksize'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    mesh:maxregionblocksize
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      mesh:maxregionblocksize
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'BOUT.inp'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    BOUT.inp
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      BOUT.inp
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/griddata_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:13: WARNING: unknown document: ../_breathe_autogen/file/dataformat_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:268: WARNING: Unparseable C++ cross-reference: 'restart.redistribute'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 7]
    restart.redistribute
    -------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 7]
      restart.redistribute
      -------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field2d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field3d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:182: WARNING: Unparseable C++ cross-reference: 'return\n0.5*(f.p - f.m);'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
    return
  0.5*(f.p - f.m);
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:192: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:196: WARNING: Unparseable C++ cross-reference: '1'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    1
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:221: WARNING: Unparseable C++ cross-reference: 'REGISTER_DERIVATIVE(DDX_C2)()'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 19]
    REGISTER_DERIVATIVE(DDX_C2)()
    -------------------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Invalid C++ declaration: Expected end of definition or ;. [error at 27]
      REGISTER_DERIVATIVE(DDX_C2)()
      ---------------------------^
  If the function has a return type:
    Error in declarator
    If declarator-id with parameters-and-qualifiers:
      Invalid C++ declaration: Expected identifier in nested name. [error at 19]
        REGISTER_DERIVATIVE(DDX_C2)()
        -------------------^
    If parenthesis in noptr-declarator:
      Error in declarator or parameters-and-qualifiers
      If pointer to member declarator:
        Invalid C++ declaration: Expected '::' in pointer to member (function). [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
      If declarator-id:
        Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:238: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:278: WARNING: Could not lex literal_block as "cpp". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/installing.rst:190: WARNING: Unparseable C++ cross-reference: 'export LC_CTYPE=C.utf8'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
    export LC_CTYPE=C.utf8
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/installing.rst:358: WARNING: undefined label: sec-install-bout (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:30: WARNING: Unparseable C++ cross-reference: 'examples/invertable_operator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 8]
    examples/invertable_operator
    --------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 8]
      examples/invertable_operator
      --------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable_ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable_ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/laplacian.rst:186: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/nonlocal.rst:117: WARNING: undefined label: tab-snb-options
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/output_and_post.rst:587: WARNING: Could not lex literal_block as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/time_integration.rst:916: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
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dumping object inventory... done
build succeeded, 180 warnings.
The HTML pages are in html.
Documentation available in file:///builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/html/index.html
make: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual'
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib;' export 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
++ export LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ popd
+ for mpi in mpich openmpi
+ pushd build_openmpi
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1:/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1:/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2021-01-17 14:29:36.015190724 +0000
+++ ./configure	2021-01-17 14:41:13.571107363 +0000
@@ -1953,7 +1953,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./build-aux/config.sub
++ basename ./build-aux/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./build-aux/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './build-aux/config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./build-aux/config.guess
++ basename ./build-aux/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./build-aux/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './build-aux/config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./build-aux/ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-netcdf --with-hdf5 --enable-shared --with-system-mpark --libdir=/usr/lib64/openmpi/lib --bindir=/usr/lib64/openmpi/bin --sbindir=/usr/lib64/openmpi/sbin --includedir=/usr/include/openmpi-x86_64 --datarootdir=/usr/share --with-petsc --with-sundials
configure: WARNING: unrecognized options: --disable-dependency-tracking
checking for x86_64-redhat-linux-gnu-mpic++... no
checking for x86_64-redhat-linux-gnu-mpicxx... no
checking for x86_64-redhat-linux-gnu-mpiCC... no
checking for x86_64-redhat-linux-gnu-sxmpic++... no
checking for x86_64-redhat-linux-gnu-hcp... no
checking for x86_64-redhat-linux-gnu-mpxlC_r... no
checking for x86_64-redhat-linux-gnu-mpxlC... no
checking for x86_64-redhat-linux-gnu-mpixlcxx_r... no
checking for x86_64-redhat-linux-gnu-mpixlcxx... no
checking for x86_64-redhat-linux-gnu-mpg++... no
checking for x86_64-redhat-linux-gnu-mpc++... no
checking for x86_64-redhat-linux-gnu-mpCC... no
checking for x86_64-redhat-linux-gnu-cmpic++... no
checking for x86_64-redhat-linux-gnu-mpiFCC... no
checking for x86_64-redhat-linux-gnu-CCicpc... no
checking for x86_64-redhat-linux-gnu-pgCC... no
checking for x86_64-redhat-linux-gnu-pathCC... no
checking for x86_64-redhat-linux-gnu-sxc++... no
checking for x86_64-redhat-linux-gnu-xlC_r... no
checking for x86_64-redhat-linux-gnu-xlC... no
checking for x86_64-redhat-linux-gnu-bgxlC_r... no
checking for x86_64-redhat-linux-gnu-bgxlC... no
checking for x86_64-redhat-linux-gnu-openCC... no
checking for x86_64-redhat-linux-gnu-sunCC... no
checking for x86_64-redhat-linux-gnu-crayCC... no
checking for x86_64-redhat-linux-gnu-aCC... no
checking for x86_64-redhat-linux-gnu-CC... no
checking for x86_64-redhat-linux-gnu-g++... no
checking for x86_64-redhat-linux-gnu-c++... no
checking for x86_64-redhat-linux-gnu-gpp... no
checking for x86_64-redhat-linux-gnu-cxx... no
checking for x86_64-redhat-linux-gnu-cc++... no
checking for x86_64-redhat-linux-gnu-cl.exe... no
checking for x86_64-redhat-linux-gnu-FCC... no
checking for x86_64-redhat-linux-gnu-KCC... no
checking for x86_64-redhat-linux-gnu-RCC... no
checking for mpic++... mpic++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether mpic++ accepts -g... yes
checking for function MPI_Init... yes
checking for mpi.h... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for gmake... gmake
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking whether mpic++ supports C++11 features by default... yes
checking for sqrt in -lm... yes
checking how to run the C++ preprocessor... mpic++ -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for vprintf... yes
checking for _doprnt... no
checking does C++ compiler support __PRETTY_FUNCTION__... yes
checking for a sed that does not truncate output... /usr/bin/sed
checking whether to build with code coverage support... no
checking whether C++ compiler accepts -Werror=unknown-warning-option... no
checking whether C++ compiler accepts -we10006,10148... no
checking whether C++ compiler accepts -Wall... yes
checking whether C++ compiler accepts -Wextra... yes
checking whether C++ compiler accepts -Wnull-dereference... yes
checking whether C++ compiler accepts -Wno-cast-function-type... yes
configure: Enabling default optimisations
checking whether C++ compiler accepts -O2... yes
configure: Run-time checking enabled
configure:  -> Level 2 (Basic checking + stack tracing)
configure: Segmentation fault handling enabled
configure: Output coloring enabled
configure: Field name tracking disabled
configure: Signaling floating point exceptions disabled
checking for addr2line... yes
checking for popen... yes
checking for backtrace... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for library containing dladdr... -ldl
configure: Native backtrace enabled
./configure: line 6363: git: command not found
checking for fftw-wisdom... /usr/bin/fftw-wisdom
checking for fftw3.h... yes
checking for libfftw3... yes
checking for ncxx4-config... /usr/bin/ncxx4-config
configure:  -> NetCDF-4 support enabled
configure: Parallel-NetCDF support disabled
checking for gawk... gawk
checking for x86_64-redhat-linux-gnu-gcc... mpicc
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking how to run the C preprocessor... mpicc -E
checking for h5cc... /usr/bin/h5cc
checking for HDF5 type... serial
checking for HDF5 libraries... yes (version 1.10.6)
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for main in -lhdf5_hl... yes
configure: Found HDF5
configure: Parallel HDF5 support disabled
configure: Supported file formats: netCDF HDF5
checking for libblas... no
checking for liblapack... no
checking for x86_64-redhat-linux-gnu-pkg-config... /usr/bin/x86_64-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
configure: Using PETSC_DIR=, PETSC_ARCH=
checking for //conf... no
checking for //lib/petsc/conf... no
checking for PETSC... yes
checking PETSc has SUNDIALS support... no
checking for SUNDIALS config header... yes
checking for SUNDIALS minor version... ok
configure: Searching for SUNDIALS IDA library
checking for sundials-config... no
checking if we can compile with SUNDIALS IDA... configure: WARNING: No sundials-config available, no path given, will try compiling with IDA anyway
yes
configure: Using SUNDIALS IDA solver
configure: => IDA solver enabled
configure: Searching for SUNDIALS CVODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with CVODE anyway
checking if we can compile with SUNDIALS CVODE... yes
configure: Using SUNDIALS CVODE solver
configure: => CVODE solver enabled
configure: Searching for SUNDIALS ARKODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with ARKODE anyway
checking if we can compile with SUNDIALS ARKODE... yes
configure: Using SUNDIALS ARKODE solver
configure: => ARKODE solver enabled
configure: Scorep support disabled
checking for mpark.variant... yes
configure: PVODE being built without OpenMP support
configure: Building PVODE
configure: Successfully built PVODE
configure: Installing PVODE into BOUT++ sourcetree
checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/msgfmt
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... /bin/sh: build-aux/config.rpath: No such file or directory
done
checking 32-bit host C ABI... no
checking for ELF binary format... yes
checking for the common suffixes of directories in the library search path... lib,lib,lib64
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyPreferredLanguages... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
configure: Enabling language support with gettext
gmake: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/locale'
Building language:  de
Building language:  es
Building language:  fr
Building language:  zh_CN
Building language:  zh_TW
gmake: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/locale'
configure: creating ./config.status
config.status: creating make.config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: creating ./config.status
config.status: creating make.config
config.status: creating bin/bout-config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: -------------------------
configure:   Configuration summary  
configure: -------------------------
configure:   PETSc support           : yes (has SUNDIALS: no)
configure:   SLEPc support           : no
configure:   IDA support             : yes
configure:   CVODE support           : yes
configure:   ARKODE support          : yes
configure:   FFTW support            : yes
configure:   NetCDF support          : yes
configure:   Parallel-NetCDF support : no
configure:   HDF5 support            : yes (parallel: no)
configure:   MUMPS support           : no
configure:   Lapack support          : no
configure:   Scorep support          : no
configure:   OpenMP support          : no (schedule: )
configure:   Natural language support: yes (path: ${datarootdir}/locale)
configure: 
configure: -------------------------------
configure:   Data analysis configuration  
configure: -------------------------------
configure: 
configure: === IDL ===
configure: 
configure: Make sure that the tools/idllib directory is in your IDL_PATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:     export IDL_PATH=+/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/idllib:'<IDL_DEFAULT>':$IDL_PATH
configure: 
configure: === Python ===
configure: 
configure: Make sure that the tools/pylib directory is in your PYTHONPATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:    export PYTHONPATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/:$PYTHONPATH
configure: 
configure: *** Now run 'gmake' to compile BOUT++ ***
+ sed -e 's| -L/usr/lib64 | |g' -e 's| -Wl,--as-needed | |g' -i make.config
+ sed -e 's|-lblas|-lflexiblas|g' -e 's|-llapack|-lflexiblas|g' -i make.config
+ cat make.config
# configuration file for BOUT++
# September 2008: Converted to use autoconf. Can be manually edited
# for the (very) rare occasions when autoconf fails
# extra compilation flags:
# -DCHECK=lvl  Enables a host of additional checks on each operation
#              such as uninitialised data if lvl is > 0. -DCHECK=3
#              enables all tests, while -DCHECK=0 disables them.
#              Helps when debugging
# -DTRACK      Keeps track of variable names.
#              Enables more useful error messages
# for SSE2: -msse2 -mfpmath=sse
# 
# This must also specify one or more file formats
# -DPDBF  PDB format (need to include pdb_format.cxx)
# -DNCDF  NetCDF format (nc_format.cxx)
# PETSc config variables need to be first, else they may clobber other
# options (e.g. CXX, CXXFLAGS)
PETSC_DIR ?= 
PETSC_ARCH ?= 
SLEPC_DIR ?= 
SLEPC_ARCH ?= 
# These lines can be replaced in "make install" to point to install directories
# They are used in the CXXFLAGS variable below rather than hard-coding the directories
BOUT_INCLUDE_PATH=$(BOUT_TOP)/include
BOUT_LIB_PATH=$(BOUT_TOP)/lib
BOUT_CONFIG_FILE=$(BOUT_TOP)/make.config
prefix = /usr
exec_prefix = /usr
datarootdir = /usr/share
# This path to the locale (.mo) files is hard-wired into bout++.cxx at compile time
BOUT_LOCALE_PATH=${datarootdir}/locale
# Created this variable so that a user won't overwrite the CXXFLAGS variable
# on the command line, just add to this one
BOUT_FLAGS = $(CXXFLAGS) -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING="\"4.3.2\"" -DBOUT_VERSION_DOUBLE=4.32  -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=$(BOUT_LOCALE_PATH)   
#Use := here to force a "static" evaluation of the current state of BOUT_FLAGS to
#avoid infinite recursion that would arise if BOUT_FLAGS appeared on both sides of =
BOUT_FLAGS := $(BOUT_FLAGS) -DBOUT_FLAGS_STRING="$(BOUT_FLAGS)"
# Specify the MPI C++ compiler in CXX
CXX		= mpic++
CC      = $(CXX)
AR		= ar
ARFLAGS = cruU
RANLIB	= ranlib
MKDIR	= /usr/bin/mkdir -p
####################################################################
# Do not need to alter anything below
####################################################################
LD       = $(CXX)
LDFLAGS  = -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 
LIBS     = -ldl -lm  
CPPFLAGS = 
####################################################################
# Extra (optional) source files, includes and libs
# NOTE: EXTRA_SRC must include a solver (solver.cxx or ida_solver.cxx)
#       and a file format (nc_format.cxx or pdb_format.cxx)
####################################################################
EXTRA_INCS	  = $(CPPFLAGS)  -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc     
EXTRA_LIBS	  = $(LIBS)  -lfftw3 -lnetcdf_c++4 -lnetcdf  -lhdf5_hl -lhdf5  -lhdf5_hl -lsz -lz -ldl -lm -L/usr/lib64/openmpi/lib -lpetsc   -lsundials_ida -lsundials_nvecparallel   -lsundials_cvode -lsundials_nvecparallel   -lsundials_arkode -lsundials_nvecparallel  -L$(BOUT_LIB_PATH) -lpvode -lpvpre  
PRECON_SOURCE = 
BOUT_VERSION  = 4.3.2
####################################################################
# These are used for compiling physics modules using BOUT++ library
####################################################################
# Files that are needed by configure and should be dependencies for 'all'
OBJ    = $(SOURCEC:%.cxx=%.o)
ifndef RELEASED
# If this is part of an packaged and installed installation, the user cannot
# write these files, so they shouldn't be changed. Thus only set this, in
# the non installed case.
LIB    = $(BOUT_LIB_PATH)/libbout++.a
LIB_SO = $(BOUT_LIB_PATH)/libbout++.so
endif
MPARK_VARIANT_INCLUDE_PATH=
BOUT_INCLUDE = -I$(BOUT_INCLUDE_PATH) $(CXXINCLUDE) $(EXTRA_INCS) 
BOUT_LIBS    = -lm -L$(BOUT_LIB_PATH) -lbout++ $(EXTRA_LIBS)
CHANGED = $(shell find -f $(BOUT_TOP)/include $(BOUT_TOP)/src -type f \( -name \*.cxx -or -name \*.h \) -newer $(LIB) -print 2> /dev/null)
# This will set a default if no TARGET is provided
TARGET				?= $(SOURCEC:%.cxx=%)
####################################################################
# Definining stuff for recursive make
####################################################################
# Phony targets since they are directory names
.PHONY: $(DIRS) lib install libfast runtest manual sphinx doxygen
ifneq ("$(TARGET)","libfast")
all: $(BOUT_CONFIG_FILE) $(DIRS) $(TARGET)
else
all: $(BOUT_TOP)/config.status $(BOUT_CONFIG_FILE) $(DIRS)
endif
libfast: $(BOUT_CONFIG_FILE) $(DIRS)
####################################################################
# Recursively run make through subdirs
####################################################################
ifeq ("$(TARGET)" , "lib")
$(DIRS):
# make $@ slowly using the old method where parallel builds can cause
# race conditions that 
	@$(MAKE) -s --no-print-directory TARGET=lib -C $@ all
else
ifeq ("$(TARGET)","libfast")
$(DIRS):
# make $@ using the libfast method, where all .o files
# are only created in the end
	@$(MAKE) -s --no-print-directory TARGET=$(TARGET) -C $@ $(TARGET)
else
MODULE_DIR?=$(shell pwd)
$(DIRS):
# MODULE_DIR: pass the module directory, where the libraries should be
# created.
# SUB_NAME is used for creating a library with the expected name.
# first a potential trailing slash is removed, and after that the
# directory name is extracted. This allows to e.g. specify a directory
# as fuu/bar/ and still get an archive named bar.a
	@$(MAKE) -s --no-print-directory MODULE_DIR=$(MODULE_DIR) SUB_NAME=$(shell basename $@) TARGET=sub -C $@
endif
endif
# Create 'lib' and 'include' incase they don't exist
$(BOUT_TOP)/include $(BOUT_TOP)/lib:
	$(MKDIR) $@
####################################################################
# Install header files and libraries
####################################################################
INSTALL = /usr/bin/install -c
INSTALL_PROGRAM = ${INSTALL}
INSTALL_DATA = ${INSTALL} -m 644
INSTALL_INCLUDE_PATH = $(DESTDIR)/usr/include/openmpi-x86_64/bout++/
# A list of relative paths e.g. "fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo"
MO_FILES = $(shell cd locale; ls */LC_MESSAGES/libbout.mo)
install: libfast
	$(PRE_INSTALL)     # Pre-install commands follow.
	$(NORMAL_INSTALL)  # Normal commands follow.
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/{,pvode,bout/sys,bout/invert}
	$(MKDIR) $(DESTDIR)/{/usr/lib64/openmpi/lib,/usr/lib64/openmpi/bin,/usr/share/bout++/idllib}
	$(MKDIR) $(DESTDIR)//usr/share/bout++/pylib/{boutdata,boututils}
	$(INSTALL_DATA) include/*.hxx $(INSTALL_INCLUDE_PATH)
ifeq ("", "yes")
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/mpark
	$(INSTALL_DATA) $(MPARK_VARIANT_INCLUDE_PATH)/mpark/*.hpp $(INSTALL_INCLUDE_PATH)/mpark
endif
	$(INSTALL_DATA) include/pvode/*.h $(INSTALL_INCLUDE_PATH)/pvode/
	$(INSTALL_DATA) include/bout/*.hxx $(INSTALL_INCLUDE_PATH)/bout/
	$(INSTALL_DATA) include/bout/sys/*.hxx $(INSTALL_INCLUDE_PATH)/bout/sys/
	$(INSTALL_DATA) include/bout/invert/*.hxx $(INSTALL_INCLUDE_PATH)/bout/invert/
	$(INSTALL_DATA) lib/libbout++.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_DATA) lib/libpvode.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_DATA) lib/libpvpre.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_PROGRAM)  bin/bout-config $(DESTDIR)/usr/lib64/openmpi/bin
	$(INSTALL_PROGRAM)  bin/bout-log-color $(DESTDIR)/usr/lib64/openmpi/bin
	$(INSTALL_DATA)  tools/idllib/*.pro $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/idllib/README $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/pylib/boutdata/*.py $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(INSTALL_DATA)  tools/pylib/boututils/*.py $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(INSTALL_DATA)  make.config $(INSTALL_INCLUDE_PATH)
	for mo in $(MO_FILES); do $(MKDIR) $(DESTDIR)${datarootdir}/locale/`dirname $$mo`; $(INSTALL_DATA) locale/$$mo $(DESTDIR)${datarootdir}/locale/$$mo; done
	$(POST_INSTALL)    # Post-install commands follow.
	@# Modify paths in the bout-config script 
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config 
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
endif
	@# Modify paths in the make.config file
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" $(INSTALL_INCLUDE_PATH)/make.config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
endif
#	Set the make.config as released, so the library isn't rebuild. This way the .a file doesn't need to be preserved/installed
	sed -i '26 i RELEASED                 = yes' $(INSTALL_INCLUDE_PATH)/make.config
uninstall:
	$(PRE_UNINSTALL)     # Pre-uninstall commands follow.
	$(NORMAL_UNINSTALL)  # Normal commands follow.
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(RM) -r $(DESTDIR)/usr/share/bout++/idllib/
	$(RM) $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	$(RM) $(DESTDIR)/usr/lib64/openmpi/bin/bout-log-color
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libbout++.a
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libpvode.a
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libpvpre.a
	$(RM) -r  $(DESTDIR)/usr/include/openmpi-x86_64/bout++/
	$(RM) $(DESTDIR)${datarootdir}/locale/*/LC_MESSAGES/libbout.mo
	$(POST_UNINSTALL)    # Post-uninstall commands follow.
####################################################################
# Builds the library with $(OBJ) which is defined from the SOURCEC variable
####################################################################
# Rules for downloading submodules
include $(BOUT_TOP)/makefile.submodules
ifeq ("$(TARGET)", "libfast")
libfast: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(OBJ) $(DIRS)
endif
ifeq ("$(TARGET)", "lib")
lib: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to libbout++.a"
	@$(AR) $(ARFLAGS) $(LIB) $(OBJ)
	@$(RANLIB) $(LIB)
endif
endif
ifeq ("$(TARGET)", "sub")
LIB=$(MODULE_DIR)/$(SUB_NAME).a
sub:$(LIB)
$(LIB): makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to $(LIB)"
	@LIBT=$(LIB).$$$$.a && \
		$(AR) $(ARFLAGS) $${LIBT} $(OBJ) && \
		$(RANLIB) $${LIBT} && \
		mv $${LIBT} $(LIB)
endif
endif
runtest:
	./runtest
ifneq ("$(TARGET)", "sub")
ifneq ("$(TARGET)", "libfast")
ifneq ("$(TARGET)", "lib")
ifneq ("$(TARGET)", "runtest")
####################################################################
# Make libbout++.a if it doesn't exist with the checklib target
####################################################################
libbout++.a:
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
 
####################################################################
# Make the target (e.g. gas_compress)
####################################################################
# first we remove a trailing slash, if present. Note that currently we
# dont support several trailing slashes, as in fuu/bar/// 
DIRS_=$(DIRS:%/=%)
# then we extract the directory name, in case it is a longer path
# We are not in a recipe, so # needs to be escaped
# $$ is an escaped $
DIRS__=$(shell for d in $(DIRS_) ; do basename $$d;done)
# now we can generate a list of libraries
SUB_LIBS=$(DIRS__:%=%.a)
$(SUB_LIBS):$(DIRS__)
$(SOURCEC): checklib
$(SOURCEC:%.cxx=%.o): $(LIB)
$(TARGET): | $(DIRS)
$(TARGET): makefile $(BOUT_CONFIG_FILE) $(OBJ) $(SUB_LIBS)
	@echo "  Linking" $(TARGET)
	@$(LD) $(LDFLAGS) -o $(TARGET) $(OBJ) $(SUB_LIBS) $(BOUT_LIBS)
checklib:
ifneq ("$(CHANGED)foo", "foo")
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
endif
endif
endif
endif
endif
# Ignore missing requirement files
-include .*.mk
# If it is a libfast target, track changes to rebuild library if needed
#
# Further track dependencies using gcc's -M feature:
# -MF  write the generated dependency rule to a file
# -MG  assume missing headers will be generated and don't stop with an error
# -MM  generate dependency rule for prerequisite, skipping system headers
# -MP  add phony target for each header to prevent errors when header is missing
# -MT  add a target to the generated dependency
# Ignore failure, in case some compiler does not support this
%.o: $(BOUT_CONFIG_FILE) %.cxx
	@echo "  Compiling " $(@:.o=.cxx)
	@$(CXX) $(BOUT_INCLUDE) $(BOUT_FLAGS) -c $(@:.o=.cxx) -o $@
ifeq ("$(TARGET)","libfast")
	test "$@" = "bout++.o" || touch $(BOUT_TOP)/lib/.last.o.file
endif
####################################################################
# Clean target. Pretty self explanatory.
# NOTE: See that double colon (::) below? That's signifies a rule that can be added to later
# See:
# http://owen.sj.ca.us/~rk/howto/slides/make/slides/makecolon.html
####################################################################
clean::
	-@$(RM) -rf $(OBJ) $(DEPS) $(TARGET)
	@for pp in $(DIRS); do echo "  " $$pp cleaned; $(MAKE) --no-print-directory -C $$pp clean; done
	@$(RM) -f $(SUB_LIBS)
	-@$(RM) .*.mk
	@test -f make.config && ( find src | grep '\.o$$' && echo "WARNING: Some object files remain - which might cause issues. Clean with $(MAKE) clean-remove-object-files" ) || exit 0
clean-remove-object-files:
	find src|grep '\.o$$' | xargs rm
distclean:: clean clean-tests
	@echo include cleaned
# Removing the externalpackage installation. When we have more packages, need a better way
	@$(RM) -rf $(BOUT_TOP)/include/pvode
	@echo lib cleaned
	@$(RM) -rf $(BOUT_TOP)/lib/*
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/lib/*.a
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/source/obj/*.o
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/precon/obj/*.o
	-@$(RM) -rf $(BOUT_TOP)/autom4te.cache make.config
	@echo externalpackages cleaned
	@touch $(BOUT_TOP)/configure
	@echo autom4te.cache cleaned
clean-tests: clean-unit-tests clean-integrated-tests clean-mms-tests
clean-unit-tests:
	@echo "   tests/unit cleaned"
	@$(MAKE) --no-print-directory -C tests/unit clean
clean-integrated-tests:
	@echo "   tests/integrated cleaned"
	@$(MAKE) --no-print-directory -C tests/integrated clean
clean-mms-tests:
	@echo "   tests/MMS cleaned"
	@$(MAKE) --no-print-directory -C tests/MMS clean
####################################################################
# Documentation
####################################################################
MANUAL_DIR=$(BOUT_TOP)/manual
doxygen:
	$(MAKE) -C $(MANUAL_DIR) doxygen
breathe-autogen:
	$(MAKE) -C $(MANUAL_DIR) breathe_autogen
sphinx-docs-html:
	$(MAKE) -C $(MANUAL_DIR) sphinx-html
sphinx-docs-latex:
	$(MAKE) -C $(MANUAL_DIR) sphinx-pdf
manual:
	$(MAKE) -C $(MANUAL_DIR)
manual-html:
	$(MAKE) -C $(MANUAL_DIR) html
manual-pdf:
	$(MAKE) -C $(MANUAL_DIR) pdf
python: libfast
	$(MAKE) -C tools/pylib python3
python2: libfast
	$(MAKE) -C tools/pylib python2
python-all:python python2
######################################################################
# Code coverage
######################################################################
GCOV = 
LCOV = 
GENHTML = 
abs_builddir = /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi
# Code coverage
#
# Optional:
#  - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting.
#    Multiple directories may be specified, separated by whitespace.
#    (Default: $(top_builddir))
#  - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated
#    by lcov for code coverage. (Default:
#    bout-coverage.info)
#  - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage
#    reports to be created. (Default:
#    bout-coverage)
#  - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage,
#    set to 0 to disable it and leave empty to stay with the default.
#    (Default: empty)
#  - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov
#    instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov
#    instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
#  - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov
#  - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the
#    collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
#  - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering
#    lcov instance. (Default: empty)
#  - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
#  - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the
#    genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml
#    instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore
#
# The generated report will be titled using the $(PACKAGE_NAME) and
# $(PACKAGE_VERSION). In order to add the current git hash to the title,
# use the git-version-gen script, available online.
# Optional variables
CODE_COVERAGE_DIRECTORY ?= $(abs_builddir)
CODE_COVERAGE_OUTPUT_FILE ?= bout-coverage.info
CODE_COVERAGE_OUTPUT_DIRECTORY ?= bout-coverage
CODE_COVERAGE_BRANCH_COVERAGE ?=
CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)"
CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?=
CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\
$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
CODE_COVERAGE_IGNORE_PATTERN ?= "*test*/*"
# Use recursive makes in order to ignore errors during check
check-code-coverage:
	@echo "Need to reconfigure with --enable-code-coverage"
# Capture code coverage data
code-coverage-capture: code-coverage-capture-hook
	@echo "Need to reconfigure with --enable-code-coverage"
# Hook rule executed before code-coverage-capture, overridable by the user
code-coverage-capture-hook:
GITIGNOREFILES ?=
GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)
.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean
+ make -j2 shared python
  Compiling  field.cxx
  Compiling  nc_format.cxx
  Compiling  ncxx4.cxx
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from ncxx4.hxx:51,
                 from ncxx4.cxx:23:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  field2d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field2d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field2d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pnetcdf.cxx
  Compiling  h5_format.cxx
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field3d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field3d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field3d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  datafile.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldperp.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from fieldperp.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from fieldperp.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_data.cxx
  Compiling  dataformat.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  formatfactory.cxx
  Compiling  fieldgroup.cxx
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from impls/netcdf4/ncxx4.hxx:51,
                 from formatfactory.cxx:8:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  cyclic.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_parderiv.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parderiv_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from parderiv_factory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from parderiv_factory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldgenerators.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_tri.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  initialprofiles.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_band.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vecops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pdd.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  spt.cxx
  Compiling  vector2d.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../../include/bout/mesh.hxx:46,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../../include/bout/mesh.hxx:46,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vector3d.cxx
  Compiling  petsc_laplace.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  where.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mumps_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  globalfield.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cyclic_laplace.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  generated_fieldops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shoot_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_laplace.cxx
  Compiling  multigrid_laplace.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
invert_laplace.cxx: In constructor 'Laplacian::Laplacian(Options*, CELL_LOC, Mesh*)':
invert_laplace.cxx:100:16: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                ^~~~~~~~
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx:100:30: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                              ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const FieldPerp&, FieldPerp&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:770:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  770 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const Field3D&, Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:800:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  800 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:831:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  831 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Compiling  multigrid_alg.cxx
  Compiling  laplacefactory.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_solver.cxx
  Compiling  naulin_laplace.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutmesh.cxx
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutmesh.hxx:5,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutmesh.hxx:5,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexy.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscis.h:7,
                 from /usr/include/openmpi-x86_64/petsc/petscvec.h:9,
                 from /usr/include/openmpi-x86_64/petsc/petscmat.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscpc.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscis.h:7,
                 from /usr/include/openmpi-x86_64/petsc/petscvec.h:9,
                 from /usr/include/openmpi-x86_64/petsc/petscmat.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscpc.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-cyclic.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shiftedmetric.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-petsc.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fci.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz.cxx
  Compiling  identity.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromoptions.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fft_fftw.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromfile.cxx
  Compiling  lapack_routines.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  physicsmodel.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from ../../include/bout.hxx:39,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from ../../include/bout.hxx:39,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bilinear.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  smoothing.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  hermite_spline.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sourcex.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gyro_average.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  monotonic_hermite_spline.cxx
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, BoutReal, int)':
gyro_average.cxx:170:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  170 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field2D&, int)':
gyro_average.cxx:187:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  187 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field3D&, int)':
gyro_average.cxx:194:37: warning: 'Field3D gyroPade0(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  194 |   return gyroPade0(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:175:9: note: declared here
  175 | Field3D gyroPade0(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, BoutReal, int)':
gyro_average.cxx:209:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  209 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field2D&, int)':
gyro_average.cxx:226:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  226 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field3D&, int)':
gyro_average.cxx:232:37: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  232 |   return gyroPade1(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field2D gyroPade1(const Field2D&, const Field2D&, int)':
gyro_average.cxx:238:34: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  238 |   tmp = gyroPade1(tmp, rho, flags);
      |                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, BoutReal, int)':
gyro_average.cxx:243:53: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:243:66: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field2D&, int)':
gyro_average.cxx:251:53: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:251:66: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field3D&, int)':
gyro_average.cxx:260:37: warning: 'Field3D gyroPade2(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  260 |   return gyroPade2(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:250:9: note: declared here
  250 | Field3D gyroPade2(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  snb.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lagrange_4pt.cxx
  Compiling  arkode.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  difops.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  ida.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  petsc.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
petsc.cxx: In function 'PetscErrorCode PetscMonitor(TS, PetscInt, PetscReal, Vec, void*)':
petsc.cxx:859:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |     ^~
In file included from /usr/include/openmpi-x86_64/petsc/petscsys.h:1362,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/openmpi-x86_64/petsc/petscerror.h:464:32: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  464 | #define CHKERRQ(ierr)          do {PetscErrorCode ierr__ = (ierr); if (PetscUnlikely(ierr__)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,ierr__,PETSC_ERROR_REPEAT," ");} while (0)
      |                                ^~
petsc.cxx:859:79: note: in expansion of macro 'CHKERRQ'
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |                                                                               ^~~~~~~
  Compiling  snes.cxx
  Compiling  boundary_standard.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from snes.hxx:35,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from snes.hxx:35,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  imex-bdf2.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from imex-bdf2.hxx:42,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from imex-bdf2.hxx:42,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  power.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from power.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from power.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  slepc.cxx
  Compiling  karniadakis.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from karniadakis.hxx:38,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from karniadakis.hxx:38,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  meshfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4.cxx
  Compiling  surfaceiter.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk4.hxx:33,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk4.hxx:33,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  euler.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from euler.hxx:33,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from euler.hxx:33,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk3-ssp.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk3-ssp.hxx:39,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk3-ssp.hxx:39,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf45.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  index_derivs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cashkarp.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4simple.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf34.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkgeneric.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rkgeneric.hxx:31,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rkgeneric.hxx:31,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkscheme.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkschemefactory.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  split-rk.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solverfactory.cxx
In file included from impls/pvode/pvode.hxx:37,
                 from solverfactory.cxx:11:
../../include/pvode/nvector.h:93: warning: "PVEC_REAL_MPI_TYPE" redefined
   93 | #define PVEC_REAL_MPI_TYPE MPI_DOUBLE
      | 
In file included from /usr/include/openmpi-x86_64/nvector/nvector_parallel.h:44,
                 from impls/arkode/arkode.hxx:47,
                 from solverfactory.cxx:3:
/usr/include/openmpi-x86_64/sundials/sundials_mpi_types.h:38: note: this is the location of the previous definition
   38 | #define PVEC_REAL_MPI_TYPE    MPI_SUNREALTYPE
      | 
  Compiling  parallel_boundary_region.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parallel_boundary_op.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fv_ops.cxx
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/bout/../msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_ini.cxx
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_netcdf.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout_types.cxx
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from options_netcdf.cxx:7:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutexception.cxx
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  derivs.cxx
  Compiling  msg_stack.cxx
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  output.cxx
  Compiling  utils.cxx
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  optionsreader.cxx
  Compiling  boutcomm.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  timer.cxx
  Compiling  range.cxx
  Compiling  petsclib.cxx
  Compiling  expressionparser.cxx
  Compiling  slepclib.cxx
  Compiling  type_name.cxx
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout++.cxx
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
Recreating libbout++.a
make -C tools/pylib python3
Creating libbout++.so
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib'
PY=python3 make -C _boutcore_build pseudoinstall
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build'
  Generating boutcore.pyx
  Generating setup.py
  Generating helper.cxx
  Generating helper.h
  Generating resolve_enum.pxd
yes - <int>deflt
yes - <int>centre
yes - <int>xlow
yes - <int>ylow
yes - <int>zlow
yes - <int>vshift
yes - <int>deflt
yes - <int>u1
yes - <int>u2
yes - <int>c2
yes - <int>w2
yes - <int>w3
yes - <int>c4
yes - <int>u3
yes - <int>fft
yes - <int>split
yes - <int>s2
yes - <int>all
yes - <int>nobndry
yes - <int>nox
yes - <int>noy
yes - <int>noz
yes - <int>X
yes - <int>Y
yes - <int>Z
yes - <int>YAligned
yes - <int>YOrthogonal
yes - <int>Standard
yes - <int>Aligned
yes - <int>Standard
yes - <int>Average
yes - <int>C2L
yes - <int>L2C
yes - <int>Standard
yes - <int>StandardSecond
yes - <int>StandardFourth
yes - <int>Upwind
yes - <int>Flux
yes - <int>standard
yes - <int>simple
yes - <int>arakawa
yes - <int>ctu
yes - <int>arakawa_old
  Generating boutcpp.pxd
/usr/lib64/python3.9/distutils/extension.py:131: UserWarning: Unknown Extension options: 'language_level'
  warnings.warn(msg)
/usr/lib64/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build/boutcore.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
warning: resolve_enum.pxd:49:25: 'deflt' redeclared 
warning: resolve_enum.pxd:189:28: 'Standard' redeclared 
warning: resolve_enum.pxd:223:19: 'Standard' redeclared 
Compiling boutcore.pyx because it changed.
[1/1] Cythonizing boutcore.pyx
running build_ext
building 'boutcore' extension
creating build
creating build/temp.linux-x86_64-3.9
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c boutcore.cpp -o build/temp.linux-x86_64-3.9/boutcore.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from boutcore.cpp:902:
/usr/lib64/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_6DDX(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37690:96: warning: ‘Field3D DDX(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37690 |     __pyx_t_6 = DDX((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:95:34: note: declared here
   95 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDX, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_8D2DX2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37980:98: warning: ‘Field3D D2DX2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37980 |     __pyx_t_6 = D2DX2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:225:34: note: declared here
  225 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DX2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_10VDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38282:126: warning: ‘Field3D VDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38282 |     __pyx_t_6 = VDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:420:35: note: declared here
  420 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_12FDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38584:126: warning: ‘Field3D FDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38584 |     __pyx_t_6 = FDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:539:35: note: declared here
  539 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_14DDY(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38874:96: warning: ‘Field3D DDY(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38874 |     __pyx_t_6 = DDY((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:127:34: note: declared here
  127 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDY, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_16D2DY2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39164:98: warning: ‘Field3D D2DY2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39164 |     __pyx_t_6 = D2DY2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:257:34: note: declared here
  257 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DY2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_18VDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39466:126: warning: ‘Field3D VDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39466 |     __pyx_t_6 = VDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:454:35: note: declared here
  454 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_20FDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39768:126: warning: ‘Field3D FDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39768 |     __pyx_t_6 = FDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:573:35: note: declared here
  573 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_22DDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40058:96: warning: ‘Field3D DDZ(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40058 |     __pyx_t_6 = DDZ((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:159:34: note: declared here
  159 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDZ, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_24D2DZ2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40348:98: warning: ‘Field3D D2DZ2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40348 |     __pyx_t_6 = D2DZ2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:289:34: note: declared here
  289 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DZ2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_26VDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40650:126: warning: ‘Field3D VDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40650 |     __pyx_t_6 = VDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:488:35: note: declared here
  488 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_28FDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40952:126: warning: ‘Field3D FDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40952 |     __pyx_t_6 = FDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:607:35: note: declared here
  607 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: At global scope:
boutcore.cpp:25004:45: warning: ‘__pyx_obj_8boutcore_Vector2D* __pyx_f_8boutcore_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
25004 | static struct __pyx_obj_8boutcore_Vector2D *__pyx_f_8boutcore_v2dFromObj(Vector2D __pyx_v_i) {
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
boutcore.cpp:49221:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
49221 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_region(_object*)’:
boutcore.cpp:50045:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
50045 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_pw_8boutcore_45bracket(_object*, _object*, _object*)’:
boutcore.cpp:42619:141: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
42619 |   __pyx_t_1 = ((PyObject *)__pyx_f_8boutcore_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2569, __pyx_L1_error)
      |                                                                                                                                             ^
boutcore.cpp:50732:18: note: ‘__pyx_r’ was declared here
50732 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c boutexception_helper.cxx -o build/temp.linux-x86_64-3.9/boutexception_helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c helper.cxx -o build/temp.linux-x86_64-3.9/helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
mpic++ -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.9/boutcore.o build/temp.linux-x86_64-3.9/boutexception_helper.o build/temp.linux-x86_64-3.9/helper.o -L/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib -L/usr/lib64 -L/usr/lib64 -L/usr/lib64/openmpi/lib -L/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib -L/usr/lib64 -lm -lbout++ -ldl -lm -lfftw3 -lnetcdf_c++4 -lnetcdf -lhdf5_hl -lhdf5 -lhdf5_hl -lsz -lz -ldl -lm -lpetsc -lsundials_ida -lsundials_nvecparallel -lsundials_cvode -lsundials_nvecparallel -lsundials_arkode -lsundials_nvecparallel -lpvode -lpvpre -o /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build/boutcore.cpython-39-x86_64-linux-gnu.so -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
cp boutcore*.so ..
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build'
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib'
++ pwd
+ export LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ make -j2 -C manual html
make: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual'
cd doxygen && doxygen Doxyfile
warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1056 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 2149 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2171 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Doxygen version used: 1.9.1
Notice: Output directory 'bout' does not exist. I have created it for you.
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Reading /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/field/gen_fieldops.py...
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Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk4/rk4.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkscheme.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkscheme.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solver.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solver.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solverfactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solverfactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/bout_types.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/bout_types.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutcomm.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutcomm.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutexception.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutexception.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/derivs.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/derivs.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/expressionparser.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/expressionparser.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/msg_stack.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/msg_stack.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/optionparser.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/optionparser.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_netcdf.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_netcdf.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/optionsreader.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/optionsreader.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/output.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/output.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/petsclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/petsclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/range.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2//builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:1: warning: the name 'Base' supplied as the argument in the \file statement is not an input file
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:347: warning: no uniquely matching class member found for 
  const vector< int > NcFormat::getSize(const string &var)
Possible candidates:
  'const std::vector< int > NcFormat::getSize(const char *var) override' at line 77 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'const std::vector< int > NcFormat::getSize(const std::string &var) override' at line 78 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:558: warning: no uniquely matching class member found for 
  bool NcFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:599: warning: no uniquely matching class member found for 
  bool NcFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:677: warning: no uniquely matching class member found for 
  bool NcFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:739: warning: no uniquely matching class member found for 
  bool NcFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:841: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:882: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:964: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:1039: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:295: warning: no uniquely matching class member found for 
  bool PncFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:354: warning: no uniquely matching class member found for 
  bool PncFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:402: warning: no uniquely matching class member found for 
  bool PncFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:488: warning: no uniquely matching class member found for 
  bool PncFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:524: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:556: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:605: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:681: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:80: warning: no uniquely matching class member found for 
  BoundaryOpBase * BoundaryFactory::create(const string &name, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::create(const std::string &name, BoundaryRegionBase *region)' at line 70 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'BoundaryOpBase * BoundaryFactory::create(const char *name, BoundaryRegionBase *region)' at line 71 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:210: warning: no matching class member found for 
  BoundaryOpBase * BoundaryFactory::createFromOptions(const string &varname, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const std::string &varname, BoundaryRegionBase *region)'
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const char *varname, BoundaryRegionBase *region)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:313: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOp *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:326: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOpPar *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:339: warning: no matching class member found for 
  void BoundaryFactory::addMod(BoundaryModifier *bmod, const string &name)
Possible candidates:
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const std::string &name)'
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const char *name)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1229: warning: no matching class member found for 
  Field2D Coordinates::DDZ(const MAYBE_UNUSED(Field2D &f), CELL_LOC loc, const std::string &method, const std::string &region)
Possible candidates:
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, const std::string &method, REGION region)'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method, REGION region=RGN_NOBNDRY)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1244: warning: no matching class member found for 
  Field2D Coordinates::Grad_par(const Field2D &var, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Grad_par(const Field2D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Grad_par(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Grad_par(const Field3D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Grad_par(const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1265: warning: no matching class member found for 
  Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/index_derivs.cxx:59: warning: no matching class member found for 
  STAGGER Mesh::getStagger(CELL_LOC vloc, MAYBE_UNUSED(CELL_LOC inloc), const CELL_LOC outloc, const CELL_LOC allowedStaggerLoc) const
Possible candidates:
  'STAGGER Mesh::getStagger(const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
  'STAGGER Mesh::getStagger(const CELL_LOC vloc, const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
sh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
build_openmpi/src/sys/range.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/slepclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/slepclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/timer.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/timer.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/type_name.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/type_name.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/utils.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/utils.cxx...
Building macro definition list...
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Building directory list...
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Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
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Searching for members imported via using declarations...
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Building interface member list...
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Computing class inheritance relations...
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Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
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Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
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Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
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Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
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Generating style sheet...
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Generating images for formulas in HTML...
Generating example documentation...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_op.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_standard.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/array.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/assert.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/constants.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/coordinates.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/deprecated.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/deriv_store.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/expr.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/field_visitor.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/fieldgroup.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/format.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/monitor.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/rkscheme.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/solverfactory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/surfaceiter.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/timer.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/type_name.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/uncopyable.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/template_combinations.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/traits.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout_types.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
.2/build_openmpi/include/boutmain.hxx...
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  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/build_openmpi/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx...
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Generating/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
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  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
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Generating docs for compound ParDerivFactory../builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
.
Generating docs for compound ParseException...
Generating docs for compound PetscLib...
Generating docs for compound PetscSolver...
Generating docs for compound PhysicsModel...
Generating docs for nested compound PhysicsModel::PhysicsModelMonitor...
Generating docs for compound PncFormat...
Generating docs for compound Power...
Generating docs for compound PowerSolver...
Generating docs for compound produceCombinations...
Generating docs for compound PromoteType...
Generating docs for compound PvodeSolver...
Generating docs for compound RangeIterator...
Generating docs for compound Region...
Generating docs for compound RegionStats...
Generating docs for compound RegisterInFactory...
Generating docs for compound RegisterInFactory< Solver, DerivedType >...
Generating docs for compound registerMethod...
Generating docs for compound RK3SSP...
Generating docs for compound RK4SIMPLEScheme...
Generating docs for compound RK4Solver...
Generating docs for compound RKF34Scheme...
Generating docs for compound RKF45Scheme...
Generating docs for compound RKGenericSolver...
Generating docs for compound RKScheme...
Generating docs for compound RKSchemeFactory...
Generating docs for compound RunMetrics...
Generating docs for compound SaveDerivsOp...
Generating docs for compound SaveVarOp...
Generating docs for compound Set...
Generating docs for compound ShiftedMetric...
Generating docs for nested compound ShiftedMetric::ParallelSlicePhase...
Generating docs for compound SlepcLib...
Generating docs for compound SlepcSolver...
Generating docs for compound snes_info...
Generating docs for compound SNESSolver...
Generating docs for compound Solver...
Generating docs for nested compound Solver::VarStr...
Generating docs for compound SolverFactory...
Generating docs for compound SpecificInd...
Generating docs for compound SplitFluxDerivativeType...
Generating docs for compound SplitRK...
Generating docs for compound stencil...
Generating docs for compound Subtract...
Generating docs for compound SurfaceIter...
Generating docs for compound Tensor...
Generating docs for compound Timer...
Generating docs for nested compound Timer::timer_info...
Generating docs for compound TypeContainer...
Generating docs for compound Uncopyable...
Generating docs for compound Vector2D...
Generating docs for compound Vector3D...
Generating namespace index...
Generating docs for namespace bout
Generating docs for compound bout::HeatFluxSNB...
Generating docs for namespace bout::derivatives
Generating docs for namespace bout::derivatives::index
Generating docs for namespace bout::experimental
Generating docs for compound bout::experimental::CommandLineArgs...
Generating docs for compound bout::experimental::OptionsNetCDF...
Generating docs for namespace bout::fft
Generating docs for namespace bout::globals
Generating docs for namespace bout::inversion
Generating docs for compound bout::inversion::InvertableOperator...
Generating docs for namespace bout::utils
Generating docs for compound bout::utils::_Unique_if...
Generating docs for compound bout::utils::_Unique_if< T[]>...
Generating docs for compound bout::utils::_Unique_if< T[N]>...
Generating docs for compound bout::utils::function_traits...
Generating docs for compound bout::utils::function_traits< R(*)(Args...)>...
Generating docs for nested compound bout::utils::function_traits< R(*)(Args...)>::arg...
Generating docs for namespace bout::utils::details
Generating docs for compound bout::utils::details::CompareTypes...
Generating docs for compound bout::utils::details::CompareTypes< T, T >...
Generating docs for compound bout::utils::details::IsEqual...
Generating docs for compound bout::utils::details::StaticCastOrThrow...
Generating docs for compound bout::utils::details::ToString...
Generating docs for namespace FV
Generating docs for compound FV::Stencil1D...
Generating docs for compound FV::Upwind...
Generating docs for compound FV::Fromm...
Generating docs for compound FV::MinMod...
Generating docs for compound FV::MC...
Generating docs for namespace gen_fieldops
Generating docs for compound gen_fi/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/array.hxx:385: warning: Unsupported xml/html tag <size> found
eldops::Field...
Generating docs for namespace pvode
Generating docs for compound pvode::bandmat_type...
Generating docs for compound pvode::CVodeMemRec...
Generating docs for compound pvode::machenv_type...
Generating docs for compound pvode::nvec_type...
Generating docs for compound pvode::pvbbddata_type...
Generating docs for compound pvode::SpgmrMemRec...
Generating docs for namespace SI
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating XML output...
Generating XML output for class bout::utils::_Unique_if
Generating XML output for class bout::utils::_Unique_if< T[]>
Generating XML output for class bout::utils::_Unique_if< T[N]>
Generating XML output for class Add
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>::arg
Generating XML output for class ArkodeSolver
Generating XML output for class Array
Generating XML output for class ArrayData
Generating XML output for class asExpr
Generating XML output for class asExpr< double >
Generating XML output for class asExpr< Field3D >
Generating XML output for class asExpr< float >
Generating XML output for class asExpr< int >
Generating XML output for class Options::AttributeType
Generating XML output for class pvode::bandmat_type
Generating XML output for class Bilinear
Generating XML output for class BinaryExpr
Generating XML output for class BinaryResult
Generating XML output for class BoundaryConstGradient
Generating XML output for class BoundaryConstLaplace
Generating XML output for class BoundaryDirichlet
Generating XML output for class BoundaryDirichlet_2ndOrder
Generating XML output for class BoundaryDirichlet_4thOrder
Generating XML output for class BoundaryDirichlet_O3
Generating XML output for class BoundaryDirichlet_O4
Generating XML output for class BoundaryDivCurl
Generating XML output for class BoundaryFactory
Generating XML output for class BoundaryFree
Generating XML output for class BoundaryFree_O2
Generating XML output for class BoundaryFree_O3
Generating XML output for class BoundaryFromFieldAligned
Generating XML output for class BoundaryModifier
Generating XML output for class BoundaryNeumann
Generating XML output for class BoundaryNeumann2
Generating XML output for class BoundaryNeumann_2ndOrder
Generating XML output for class BoundaryNeumann_4thOrder
Generating XML output for class BoundaryNeumann_NonOrthogonal
Generating XML output for class BoundaryNeumann_O4
Generating XML output for class BoundaryNeumannPar
Generating XML output for class BoundaryOp
Generating XML output for class BoundaryOpBase
Generating XML output for class BoundaryOpPar
Generating XML output for class BoundaryOpPar_dirichlet
Generating XML output for class BoundaryOpPar_dirichlet_interp
Generating XML output for class BoundaryOpPar_dirichlet_O3
Generating XML output for class BoundaryOpPar_neumann
Generating XML output for class BoundaryRegion
Generating XML output for class BoundaryRegionBase
Generating XML output for class BoundaryRegionPar
Generating XML output for class BoundaryRegionXIn
Generating XML output for class BoundaryRegionXOut
Generating XML output for class BoundaryRegionYDown
Generating XML output for class BoundaryRegionYUp
Generating XML output for class BoundaryRelax
Generating XML output for class BoundaryRobin
Generating XML output for class BoundaryToFieldAligned
Generating XML output for class BoundaryWidth
Generating XML output for class BoundaryZeroLaplace
Generating XML output for class BoundaryZeroLaplace2
Generating XML output for class BoutComm
Generating XML output for class BoutException
Generating XML output for class BoutIterationFail
Generating XML output for class BoutMask
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
Generating XML output for class BoutMesh
Generating XML output for class BoutMonitor
Generating XML output for class BoutRhsFail
Generating XML output for class CASHKARPScheme
Generating XML output for class bout::experimental::CommandLineArgs
Generating XML output for class BoutMesh::CommHandle
Generating XML output for class bout::utils::details::CompareTypes
Generating XML output for class bout::utils::details::CompareTypes< T, T >
Generating XML output for class ConditionalOutput
Generating XML output for class Coordinates
Generating XML output for class pvode::CVodeMemRec
Generating XML output for class CvodeSolver
Generating XML output for class CyclicReduce
Generating XML output for class Datafile
Generating XML output for class DataFormat
Generating XML output for class DeferredFunction
Generating XML output for class DerivativeStore
Generating XML output for class DerivativeType
Generating XML output for class DirectionTypes
Generating XML output for class Divide
Generating XML output for class DummyOutput
Generating XML output for class EmptyFormat
Generating XML output for class enumWrapper
Generating XML output for class EulerSolver
Generating XML output for class ExpressionParser
Generating XML output for class exprTraits
Generating XML output for class exprTraits< double >
Generating XML output for class exprTraits< float >
Generating XML output for class exprTraits< int >
Generating XML output for class Factory
Generating XML output for class FCIMap
Generating XML output for class FCITransform
Generating XML output for class fcmplx
Generating XML output for class Field
Generating XML output for class gen_fieldops::Field
Generating XML output for class Field2D
Generating XML output for class Field2DExpr
Generating XML output for class Field3D
Generating XML output for class Field3DExpr
Generating XML output for class FieldAbs
Generating XML output for class FieldATan
Generating XML output for class FieldBallooning
Generating XML output for class FieldBinary
Generating XML output for class FieldCos
Generating XML output for class FieldCosh
Generating XML output for class FieldData
Generating XML output for class FieldErf
Generating XML output for class FieldFactory
Generating XML output for class FieldFunction
Generating XML output for class FieldGaussian
Generating XML output for class FieldGenerator
Generating XML output for class FieldGenOneArg
Generating XML output for class FieldGenTwoArg
Generating XML output for class FieldGroup
Generating XML output for class FieldHeaviside
Generating XML output for class FieldMax
Generating XML output for class FieldMin
Generating XML output for class FieldMixmode
Generating XML output for class FieldNull
Generating XML output for class FieldPerp
Generating XML output for class FieldRound
Generating XML output for class FieldSin
Generating XML output for class FieldSinh
Generating XML output for class FieldSqrt
Generating XML output for class FieldTanh
Generating XML output for class FieldTanhHat
Generating XML output for class FieldValue
Generating XML output for class FieldValuePtr
Generating XML output for class FieldVisitor
Generating XML output for class FormatFactory
Generating XML output for class FV::Fromm
Generating XML output for class bout::utils::function_traits
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>
Generating XML output for class GlobalField
Generating XML output for class GlobalField2D
Generating XML output for class GlobalField3D
Generating XML output for class GridDataSource
Generating XML output for class GridFile
Generating XML output for class GridFromOptions
Generating XML output for class H5Format
Generating XML output for class bout::HeatFluxSNB
Generating XML output for class HermiteSpline
Generating XML output for class IdaSolver
Generating XML output for class IMEXBDF2
Generating XML output for class BoundaryRegionPar::IndexPoint
Generating XML output for class BoundaryRegionPar::Indices
Generating XML output for class Interpolation
Generating XML output for class InterpolationFactory
Generating XML out/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
put for class bout::inversion::InvertableOperator
Generating XML output for class InvertPar
Generating XML output for class InvertParCR
Generating XML output for class bout::utils::details::IsEqual
Generating XML output for class KarniadakisSolver
Generating XML output for class Lagrange4pt
Generating XML output for class LaplaceCyclic
Generating XML output for class LaplaceFactory
Generating XML output for class LaplaceMultigrid
Generating XML output for class LaplaceMumps
Generating XML output for class LaplaceNaulin
Generating XML output for class LaplacePDD
Generating XML output for class LaplacePetsc
Generating XML output for class LaplaceSerialBand
Generating XML output for class LaplaceSerialTri
Generating XML output for class LaplaceShoot
Generating XML output for class LaplaceSPT
Generating XML output for class LaplaceXY
Generating XML output for class LaplaceXZ
Generating XML output for class LaplaceXZcyclic
Generating XML output for class LaplaceXZpetsc
Generating XML output for class Laplacian
Generating XML output for class LegacyModel
Generating XML output for class ExpressionParser::LexInfo
Generating XML output for class Literal
Generating XML output for class LoadVarOp
Generating XML output for class pvode::machenv_type
Generating XML output for class Matrix
Generating XML output for class FV::MC
Generating XML output for class Mesh
Generating XML output for class MeshFactory
Generating XML output for class metaData
Generating XML output for class FV::MinMod
Generating XML output for class Monitor
Generating XML output for class MonotonicHermiteSpline
Generating XML output for class MsgStack
Generating XML output for class MsgStackItem
Generating XML output for class Multigrid1DP
Generating XML output for class Multigrid2DPf1D
Generating XML output for class MultigridAlg
Generating XML output for class MultigridSerial
Generating XML output for class multiostream
Generating XML output for class multioutbuf
Generating XML output for class multioutbuf_init
Generating XML output for class Multiply
Generating XML output for class NcFormat
Generating XML output for class Ncxx4
Generating XML output for class pvode::nvec_type
Generating XML output for class OptionINI
Generating XML output for class OptionParser
Generating XML output for class Options
Generating XML output for class bout::experimental::OptionsNetCDF
Generating XML output for class OptionsReader
Generating XML output for class Options::OptionValue
Generating XML output for class Output
Generating XML output for class ShiftedMetric::ParallelSlicePhase
Generating XML output for class ParallelTransform
Generating XML output for class ParallelTransformIdentity
Generating XML output for class ParDerivFactory
Generating XML output for class ParseException
Generating XML output for class LaplacePDD::PDD_data
Generating XML output for class PetscLib
Generating XML output for class PetscSolver
Generating XML output for class PhysicsModel
Generating XML output for class PhysicsModel::PhysicsModelMonitor
Generating XML output for class PncFormat
Generating XML output for class Power
Generating XML output for class PowerSolver
Generating XML output for class produceCombinations
Generating XML output for class PromoteType
Generating XML output for class pvode::pvbbddata_type
Generating XML output for class PvodeSolver
Generating XML output for class RangeIterator
Generating XML output for class BoundaryRegionPar::RealPoint
Generating XML output for class Region
Generating XML output for class RegionStats
Generating XML output for class RegisterInFactory
Generating XML output for class RegisterInFactory< Solver, DerivedType >
Generating XML output for class registerMethod
Generating XML output for class RK3SSP
Generating XML output for class RK4SIMPLEScheme
Generating XML output for class RK4Solver
Generating XML output for class RKF34Scheme
Generating XML output for class RKF45Scheme
Generating XML output for class RKGenericSolver
Generating XML output for class RKScheme
Generating XML output for class RKSchemeFactory
Generating XML output for class RunMetric/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
s
Generating XML output for class SaveDerivsOp
Generating XML output for class SaveVarOp
Generating XML output for class Set
Generating XML output for class ShiftedMetric
Generating XML output for class SlepcLib
Generating XML output for class SlepcSolver
Generating XML output for class snes_info
Generating XML output for class SNESSolver
Generating XML output for class Solver
Generating XML output for class SolverFactory
Generating XML output for class SpecificInd
Generating XML output for class pvode::SpgmrMemRec
Generating XML output for class SplitFluxDerivativeType
Generating XML output for class SplitRK
Generating XML output for class LaplaceSPT::SPT_data
Generating XML output for class bout::utils::details::StaticCastOrThrow
Generating XML output for class stencil
Generating XML output for class FV::Stencil1D
Generating XML output for class Subtract
Generating XML output for class SurfaceIter
Generating XML output for class Tensor
Generating XML output for class Timer
Generating XML output for class Timer::timer_info
Generating XML output for class bout::utils::details::ToString
Generating XML output for class TypeContainer
Generating XML output for class Uncopyable
Generating XML output for class FV::Upwind
Generating XML output for class Datafile::VarStr
Generating XML output for class Solver::VarStr
Generating XML output for class Vector2D
Generating XML output for class Vector3D
Generating XML output for class LaplaceXZpetsc::YSlice
Generating XML output for namespace @106
Generating XML output for namespace @107
Generating XML output for namespace @175
Generating XML output for namespace @176
Generating XML output for namespace @177
Generating XML output for namespace @189
Generating XML output for namespace @205
Generating XML output for namespace @207
Generating XML output for namespace @209
Generating XML output for namespace @211
Generating XML output for namespace @213
Generating XML output for namespace @215
Generating XML output for namespace @217
Generating XML output for namespace @219
Generating XML output for namespace @221
Generating XML output for namespace @223
Generating XML output for namespace @225
Generating XML output for namespace @235
Generating XML output for namespace @240
Generating XML output for namespace @242
Generating XML output for namespace @244
Generating XML output for namespace @247
Generating XML output for namespace @251
Generating XML output for namespace @256
Generating XML output for namespace @4
Generating XML output for namespace bout
Generating XML output for namespace bout::derivatives
Generating XML output for namespace bout::derivatives::index
Generating XML output for namespace bout::experimental
Generating XML output for namespace bout::fft
Generating XML output for namespace bout::globals
Generating XML output for namespace bout::inversion
Generating XML output for namespace bout::utils
Generating XML output for namespace bout::utils::details
Generating XML output for namespace FV
Generating XML output for namespace gen_fieldops
Generating XML output for namespace netCDF
Generating XML output for namespace pvode
Generating XML output for namespace SI
Generating XML output for namespace std
Generating XML output for file boundary_factory.hxx
Generating XML output for file boundary_op.hxx
Generating XML output for file boundary_region.hxx
Generating XML output for file boundary_standard.hxx
Generating XML output for file bout.hxx
Generating XML output for file array.hxx
Generating XML output for file assert.hxx
Generating XML output for file constants.hxx
Generating XML output for file coordinates.hxx
Generating XML output for file deprecated.hxx
Generating XML output for file deriv_store.hxx
Generating XML output for file expr.hxx
Generating XML output for file field_visitor.hxx
Generating XML output for file fieldgroup.hxx
Generating XML output for file format.hxx
Generating XML output for file fv_ops.hxx
Generating XML output for file generic_factory.hxx
Generating XML output for file globalfield.hxx
Generating XML output for file griddata.hxx
Generating XML ou/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
tput for file index_derivs.hxx
Generating XML output for file index_derivs_interface.hxx
Generating XML output for file laplacexy.hxx
Generating XML output for file laplacexz.hxx
Generating XML output for file invertable_operator.hxx
Generating XML output for file macro_for_each.hxx
Generating XML output for file mesh.hxx
Generating XML output for file monitor.hxx
Generating XML output for file openmpwrap.hxx
Generating XML output for file paralleltransform.hxx
Generating XML output for file petsclib.hxx
Generating XML output for file physicsmodel.hxx
Generating XML output for file region.hxx
Generating XML output for file rkscheme.hxx
Generating XML output for file rvec.hxx
Generating XML output for file scorepwrapper.hxx
Generating XML output for file slepclib.hxx
Generating XML output for file snb.hxx
Generating XML output for file solver.hxx
Generating XML output for file solverfactory.hxx
Generating XML output for file surfaceiter.hxx
Generating XML output for file expressionparser.hxx
Generating XML output for file gettext.hxx
Generating XML output for file range.hxx
Generating XML output for file timer.hxx
Generating XML output for file type_name.hxx
Generating XML output for file uncopyable.hxx
Generating XML output for file variant.hxx
Generating XML output for file template_combinations.hxx
Generating XML output for file traits.hxx
Generating XML output for file bout_types.hxx
Generating XML output for file boutcomm.hxx
Generating XML output for file boutexception.hxx
Generating XML output for file boutmain.hxx
Generating XML output for file cyclic_reduction.hxx
Generating XML output for file datafile.hxx
Generating XML output for file dataformat.hxx
Generating XML output for file dcomplex.hxx
Generating XML output for file derivs.hxx
Generating XML output for file difops.hxx
Generating XML output for file fft.hxx
Generating XML output for file field.hxx
Generating XML output for file field2d.hxx
Generating XML output for file field3d.hxx
Generating XML output for file field_data.hxx
Generating XML output for file field_factory.hxx
Generating XML output for file fieldperp.hxx
Generating XML output for file globals.hxx
Generating XML output for file gyro_average.hxx
Generating XML output for file initialprofiles.hxx
Generating XML output for file interpolation.hxx
Generating XML output for file interpolation_factory.hxx
Generating XML output for file invert_laplace.hxx
Generating XML output for file invert_parderiv.hxx
Generating XML output for file lapack_routines.hxx
Generating XML output for file mask.hxx
Generating XML output for file msg_stack.hxx
Generating XML output for file multiostream.hxx
Generating XML output for file options.hxx
Generating XML output for file options_netcdf.hxx
Generating XML output for file optionsreader.hxx
Generating XML output for file output.hxx
Generating XML output for file parallel_boundary_op.hxx
Generating XML output for file parallel_boundary_region.hxx
Generating XML output for file band.h
Generating XML output for file cvdiag.h
Generating XML output for file cvode.h
Generating XML output for file cvspgmr.h
Generating XML output for file iterativ.h
Generating XML output for file llnlmath.h
Generating XML output for file llnltyps.h
Generating XML output for file nvector.h
Generating XML output for file pvbbdpre.h
Generating XML output for file smalldense.h
Generating XML output for file spgmr.h
Generating XML output for file vector.h
Generating XML output for file smoothing.hxx
Generating XML output for file sourcex.hxx
Generating XML output for file stencils.hxx
Generating XML output for file unused.hxx
Generating XML output for file utils.hxx
Generating XML output for file vecops.hxx
Generating XML output for file vector2d.hxx
Generating XML output for file vector3d.hxx
Generating XML output for file where.hxx
Generating XML output for file bout++.cxx
Generating XML output for file field.cxx
Generating XML output for file field2d.cxx
Generating XML output for file field3d.cxx
Generating XML output for file field_data.cxx
Generating XML output for file field_factory.cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
Generating XML output for file fieldgenerators.cxx
Generating XML output for file fieldgenerators.hxx
Generating XML output for file fieldgroup.cxx
Generating XML output for file fieldperp.cxx
Generating XML output for file gen_fieldops.py
Generating XML output for file generated_fieldops.cxx
Generating XML output for file globalfield.cxx
Generating XML output for file initialprofiles.cxx
Generating XML output for file vecops.cxx
Generating XML output for file vector2d.cxx
Generating XML output for file vector3d.cxx
Generating XML output for file where.cxx
Generating XML output for file datafile.cxx
Generating XML output for file dataformat.cxx
Generating XML output for file formatfactory.cxx
Generating XML output for file formatfactory.hxx
Generating XML output for file emptyformat.hxx
Generating XML output for file h5_format.cxx
Generating XML output for file h5_format.hxx
Generating XML output for file nc_format.cxx
Generating XML output for file nc_format.hxx
Generating XML output for file ncxx4.cxx
Generating XML output for file ncxx4.hxx
Generating XML output for file pnetcdf.cxx
Generating XML output for file pnetcdf.hxx
Generating XML output for file fft_fftw.cxx
Generating XML output for file lapack_routines.cxx
Generating XML output for file cyclic_laplace.cxx
Generating XML output for file cyclic_laplace.hxx
Generating XML output for file multigrid_alg.cxx
Generating XML output for file multigrid_laplace.cxx
Generating XML output for file multigrid_laplace.hxx
Generating XML output for file multigrid_solver.cxx
Generating XML output for file mumps_laplace.cxx
Generating XML output for file mumps_laplace.hxx
Generating XML output for file naulin_laplace.cxx
Generating XML output for file naulin_laplace.hxx
Generating XML output for file pdd.cxx
Generating XML output for file pdd.hxx
Generating XML output for file petsc_laplace.cxx
Generating XML output for file petsc_laplace.hxx
Generating XML output for file serial_band.cxx
Generating XML output for file serial_band.hxx
Generating XML output for file serial_tri.cxx
Generating XML output for file serial_tri.hxx
Generating XML output for file shoot_laplace.cxx
Generating XML output for file shoot_laplace.hxx
Generating XML output for file spt.cxx
Generating XML output for file spt.hxx
Generating XML output for file invert_laplace.cxx
Generating XML output for file laplacefactory.cxx
Generating XML output for file laplacefactory.hxx
Generating XML output for file laplacexy.cxx
Generating XML output for file laplacexz-cyclic.cxx
Generating XML output for file laplacexz-cyclic.hxx
Generating XML output for file laplacexz-petsc.cxx
Generating XML output for file laplacexz-petsc.hxx
Generating XML output for file laplacexz.cxx
Generating XML output for file cyclic.cxx
Generating XML output for file cyclic.hxx
Generating XML output for file invert_parderiv.cxx
Generating XML output for file parderiv_factory.cxx
Generating XML output for file parderiv_factory.hxx
Generating XML output for file boundary_factory.cxx
Generating XML output for file boundary_region.cxx
Generating XML output for file boundary_standard.cxx
Generating XML output for file coordinates.cxx
Generating XML output for file gridfromfile.cxx
Generating XML output for file gridfromoptions.cxx
Generating XML output for file difops.cxx
Generating XML output for file fv_ops.cxx
Generating XML output for file boutmesh.cxx
Generating XML output for file boutmesh.hxx
Generating XML output for file index_derivs.cxx
Generating XML output for file interpolation.cxx
Generating XML output for file bilinear.cxx
Generating XML output for file hermite_spline.cxx
Generating XML output for file interpolation_factory.cxx
Generating XML output for file lagrange_4pt.cxx
Generating XML output for file monotonic_hermite_spline.cxx
Generating XML output for file mesh.cxx
Generating XML output for file meshfactory.cxx
Generating XML output for file meshfactory.hxx
Generating XML output for file fci.cxx
Generating XML output for file fci.hxx
Generating XML output for file identity.cxx
Generating XML output for file shiftedmet/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
ric.cxx
Generating XML output for file parallel_boundary_op.cxx
Generating XML output for file parallel_boundary_region.cxx
Generating XML output for file surfaceiter.cxx
Generating XML output for file gyro_average.cxx
Generating XML output for file physicsmodel.cxx
Generating XML output for file smoothing.cxx
Generating XML output for file snb.cxx
Generating XML output for file sourcex.cxx
Generating XML output for file arkode.cxx
Generating XML output for file arkode.hxx
Generating XML output for file cvode.cxx
Generating XML output for file cvode.hxx
Generating XML output for file euler.cxx
Generating XML output for file euler.hxx
Generating XML output for file ida.cxx
Generating XML output for file ida.hxx
Generating XML output for file imex-bdf2.cxx
Generating XML output for file imex-bdf2.hxx
Generating XML output for file karniadakis.cxx
Generating XML output for file karniadakis.hxx
Generating XML output for file petsc.cxx
Generating XML output for file petsc.hxx
Generating XML output for file power.cxx
Generating XML output for file power.hxx
Generating XML output for file pvode.cxx
Generating XML output for file pvode.hxx
Generating XML output for file rk3-ssp.cxx
Generating XML output for file rk3-ssp.hxx
Generating XML output for file rk4.cxx
Generating XML output for file rk4.hxx
Generating XML output for file cashkarp.cxx
Generating XML output for file cashkarp.hxx
Generating XML output for file rk4simple.cxx
Generating XML output for file rk4simple.hxx
Generating XML output for file rkf34.cxx
Generating XML output for file rkf34.hxx
Generating XML output for file rkf45.cxx
Generating XML output for file rkf45.hxx
Generating XML output for file rkgeneric.cxx
Generating XML output for file rkgeneric.hxx
Generating XML output for file rkscheme.cxx
Generating XML output for file rkschemefactory.cxx
Generating XML output for file rkschemefactory.hxx
Generating XML output for file slepc.cxx
Generating XML output for file slepc.hxx
Generating XML output for file snes.cxx
Generating XML output for file snes.hxx
Generating XML output for file split-rk.cxx
Generating XML output for file split-rk.hxx
Generating XML output for file solver.cxx
Generating XML output for file solverfactory.cxx
Generating XML output for file bout_types.cxx
Generating XML output for file boutcomm.cxx
Generating XML output for file boutexception.cxx
Generating XML output for file derivs.cxx
Generating XML output for file expressionparser.cxx
Generating XML output for file msg_stack.cxx
Generating XML output for file options.cxx
Generating XML output for file optionparser.hxx
Generating XML output for file options_ini.cxx
Generating XML output for file options_ini.hxx
Generating XML output for file options_netcdf.cxx
Generating XML output for file optionsreader.cxx
Generating XML output for file output.cxx
Generating XML output for file petsclib.cxx
Generating XML output for file range.cxx
Generating XML output for file slepclib.cxx
Generating XML output for file timer.cxx
Generating XML output for file type_name.cxx
Generating XML output for file utils.cxx
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/arkode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/impls/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/cvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/data/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/euler/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/field/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/ida/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/imex-bdf2/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/interpolation/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/karniadakis/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexy/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/multigrid/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/mumps/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/naulin/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/parallel/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/pdd/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/power/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk3-ssp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/
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PYTHONPATH=../tools/pylib:$PYTHONPATH sphinx-build-3 -b html sphinx/ html/
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/usr/lib64/openmpi/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
none found
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:217: WARNING: unknown document: ../_breathe_autogen/file/spt_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:221: WARNING: unknown document: ../_breathe_autogen/file/pdd_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:223: WARNING: unknown document: ../_breathe_autogen/file/pdd_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: ../_breathe_autogen/file/invert__parderiv_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:232: WARNING: unknown document: ../_breathe_autogen/file/parderiv__factory_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: ../_breathe_autogen/file/serial_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:242: WARNING: unknown document: ../_breathe_autogen/file/serial_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:246: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:248: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:252: WARNING: unknown document: ../_breathe_autogen/file/lapack__routines_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:256: WARNING: unknown document: ../_breathe_autogen/file/boundary__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:260: WARNING: unknown document: ../_breathe_autogen/file/boundary__region_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:265: WARNING: unknown document: ../_breathe_autogen/file/boundary__standard_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: ../_breathe_autogen/file/interpolation_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:277: WARNING: unknown document: ../_breathe_autogen/file/mesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:285: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:294: WARNING: unknown document: ../_breathe_autogen/file/gyro__average_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: ../_breathe_autogen/file/smoothing_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:299: WARNING: unknown document: ../_breathe_autogen/file/sourcex_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:305: WARNING: unknown document: ../_breathe_autogen/file/solver_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:311: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:317: WARNING: unknown document: ../_breathe_autogen/file/cvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:321: WARNING: unknown document: ../_breathe_autogen/file/cvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:325: WARNING: unknown document: ../_breathe_autogen/file/ida_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:329: WARNING: unknown document: ../_breathe_autogen/file/ida_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:333: WARNING: unknown document: ../_breathe_autogen/file/petsc_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:336: WARNING: unknown document: ../_breathe_autogen/file/petsc_8hxx
generating indices... /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:340: WARNING: unknown document: ../_breathe_autogen/file/pvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:344: WARNING: unknown document: ../_breathe_autogen/file/pvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:348: WARNING: unknown document: ../_breathe_autogen/file/boutcomm_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:350: WARNING: unknown document: ../_breathe_autogen/file/boutexception_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: undefined label: sec-derivatives (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:359: WARNING: unknown document: ../_breathe_autogen/file/msg__stack_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:366: WARNING: unknown document: ../_breathe_autogen/file/options_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:370: WARNING: unknown document: ../_breathe_autogen/file/optionsreader_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:372: WARNING: unknown document: ../_breathe_autogen/file/output_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:374: WARNING: unknown document: ../_breathe_autogen/file/range_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:378: WARNING: unknown document: ../_breathe_autogen/file/stencils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:382: WARNING: unknown document: ../_breathe_autogen/file/timer_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:386: WARNING: unknown document: ../_breathe_autogen/file/utils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:392: WARNING: unknown document: ../_breathe_autogen/file/optionparser_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:394: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:396: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'mesh:maxregionblocksize'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    mesh:maxregionblocksize
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      mesh:maxregionblocksize
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'BOUT.inp'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    BOUT.inp
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      BOUT.inp
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/griddata_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:13: WARNING: unknown document: ../_breathe_autogen/file/dataformat_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:268: WARNING: Unparseable C++ cross-reference: 'restart.redistribute'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 7]
    restart.redistribute
    -------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 7]
      restart.redistribute
      -------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field2d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field3d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:182: WARNING: Unparseable C++ cross-reference: 'return\n0.5*(f.p - f.m);'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
    return
  0.5*(f.p - f.m);
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:192: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:196: WARNING: Unparseable C++ cross-reference: '1'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    1
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:221: WARNING: Unparseable C++ cross-reference: 'REGISTER_DERIVATIVE(DDX_C2)()'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 19]
    REGISTER_DERIVATIVE(DDX_C2)()
    -------------------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Invalid C++ declaration: Expected end of definition or ;. [error at 27]
      REGISTER_DERIVATIVE(DDX_C2)()
      ---------------------------^
  If the function has a return type:
    Error in declarator
    If declarator-id with parameters-and-qualifiers:
      Invalid C++ declaration: Expected identifier in nested name. [error at 19]
        REGISTER_DERIVATIVE(DDX_C2)()
        -------------------^
    If parenthesis in noptr-declarator:
      Error in declarator or parameters-and-qualifiers
      If pointer to member declarator:
        Invalid C++ declaration: Expected '::' in pointer to member (function). [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
      If declarator-id:
        Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:238: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:278: WARNING: Could not lex literal_block as "cpp". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/installing.rst:190: WARNING: Unparseable C++ cross-reference: 'export LC_CTYPE=C.utf8'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
    export LC_CTYPE=C.utf8
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/installing.rst:358: WARNING: undefined label: sec-install-bout (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:30: WARNING: Unparseable C++ cross-reference: 'examples/invertable_operator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 8]
    examples/invertable_operator
    --------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 8]
      examples/invertable_operator
      --------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable_ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable_ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/laplacian.rst:186: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/nonlocal.rst:117: WARNING: undefined label: tab-snb-options
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/output_and_post.rst:587: WARNING: Could not lex literal_block as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/time_integration.rst:916: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 180 warnings.
The HTML pages are in html.
Documentation available in file:///builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/html/index.html
make: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual'
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib;' export 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
~/build/BUILD/BOUT++-v4.3.2
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset MPI_COMPILER
++ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
++ export LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ popd
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.yEZHSK
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
++ dirname /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ cd BOUT++-v4.3.2
+ for mpi in mpich openmpi
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ pushd build_mpich
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ make install DESTDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
# Pre-install commands follow.
# Normal commands follow.
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//{,pvode,bout/sys,bout/invert}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/{/usr/lib64/mpich/lib,/usr/lib64/mpich/bin,/usr/share/bout++/idllib}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/bout++/pylib/{boutdata,boututils}
/usr/bin/install -c -m 644 include/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++/
/usr/bin/install -c -m 644 include/pvode/*.h /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//pvode/
/usr/bin/install -c -m 644 include/bout/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/
/usr/bin/install -c -m 644 include/bout/sys/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/sys/
/usr/bin/install -c -m 644 include/bout/invert/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/invert/
/usr/bin/install -c -m 644 lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c -m 644 lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c -m 644 lib/libpvpre.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c  bin/bout-config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin
/usr/bin/install -c  bin/bout-log-color /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin
/usr/bin/install -c -m 644  tools/idllib/*.pro /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/idllib/README /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/pylib/boutdata/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boutdata/
/usr/bin/install -c -m 644  tools/pylib/boututils/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boututils/
/usr/bin/install -c -m 644  make.config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++/
for mo in de/LC_MESSAGES/libbout.mo es/LC_MESSAGES/libbout.mo fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo zh_TW/LC_MESSAGES/libbout.mo; do /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/`dirname $mo`; /usr/bin/install -c -m 644 locale/$mo /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/$mo; done
# Post-install commands follow.
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config 
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i '26 i RELEASED                 = yes' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
+ sed -i '27 i RELEASED                 = 4.3.2-4.fc34' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/include/mpich-x86_64/bout++/make.config
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++
+ rm -f /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libpvpre.a
+ install lib/libbout++.so.4.3.1 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/
+ pushd /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/
~/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib ~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ for f in *.so.*
+ ln -s libbout++.so.4.3.1 libbout++.so
+ for f in *.so.*
+ ln -s libpvode.so.1.0.0 libpvode.so
+ for f in *.so.*
+ ln -s libpvpre.so.1.0.0 libpvpre.so
+ popd
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2
+ popd
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/modulefiles/bout++
+ cat
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval unset 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ for mpi in mpich openmpi
+ pushd build_openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ make install DESTDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
# Pre-install commands follow.
# Normal commands follow.
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//{,pvode,bout/sys,bout/invert}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/{/usr/lib64/openmpi/lib,/usr/lib64/openmpi/bin,/usr/share/bout++/idllib}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/bout++/pylib/{boutdata,boututils}
/usr/bin/install -c -m 644 include/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++/
/usr/bin/install -c -m 644 include/pvode/*.h /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//pvode/
/usr/bin/install -c -m 644 include/bout/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/
/usr/bin/install -c -m 644 include/bout/sys/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/sys/
/usr/bin/install -c -m 644 include/bout/invert/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/invert/
/usr/bin/install -c -m 644 lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c -m 644 lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c -m 644 lib/libpvpre.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c  bin/bout-config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin
/usr/bin/install -c  bin/bout-log-color /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin
/usr/bin/install -c -m 644  tools/idllib/*.pro /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/idllib/README /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/pylib/boutdata/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boutdata/
/usr/bin/install -c -m 644  tools/pylib/boututils/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boututils/
/usr/bin/install -c -m 644  make.config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++/
for mo in de/LC_MESSAGES/libbout.mo es/LC_MESSAGES/libbout.mo fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo zh_TW/LC_MESSAGES/libbout.mo; do /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/`dirname $mo`; /usr/bin/install -c -m 644 locale/$mo /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/$mo; done
# Post-install commands follow.
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config 
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i '26 i RELEASED                 = yes' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
+ sed -i '27 i RELEASED                 = 4.3.2-4.fc34' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/include/openmpi-x86_64/bout++/make.config
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++
+ rm -f /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libpvpre.a
+ install lib/libbout++.so.4.3.1 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/
+ pushd /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/
~/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib ~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
+ for f in *.so.*
+ ln -s libbout++.so.4.3.1 libbout++.so
+ for f in *.so.*
+ ln -s libpvode.so.1.0.0 libpvode.so
+ for f in *.so.*
+ ln -s libpvpre.so.1.0.0 libpvpre.so
+ popd
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2
+ popd
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/modulefiles/bout++
+ cat
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
unset' 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
~/build/BUILD/BOUT++-v4.3.2/tools/pylib ~/build/BUILD/BOUT++-v4.3.2
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ pushd tools/pylib
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boutdata
+ cp boutdata/__init__.py boutdata/cbdtoeqdsk.py boutdata/collect.py boutdata/data.py boutdata/gen_surface.py boutdata/griddata.py boutdata/input.py boutdata/mayavi2.py boutdata/mms.py boutdata/pol_slice.py boutdata/processor_rearrange.py boutdata/restart.py boutdata/settings.py boutdata/shiftz.py boutdata/squashoutput.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boutdata/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/bout_runners
+ cp bout_runners/__init__.py bout_runners/bout_runners.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/bout_runners/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boututils
+ cp boututils/View3D.py boututils/__init__.py boututils/analyse_equil_2.py boututils/anim.py boututils/ask.py boututils/boutarray.py boututils/boutgrid.py boututils/boutwarnings.py boututils/calculus.py boututils/check_scaling.py boututils/closest_line.py boututils/contour.py boututils/crosslines.py boututils/datafile.py boututils/efit_analyzer.py boututils/fft_deriv.py boututils/fft_integrate.py boututils/file_import.py boututils/geqdsk.py boututils/idl_tabulate.py boututils/int_func.py boututils/linear_regression.py boututils/local_min_max.py boututils/mode_structure.py boututils/moment_xyzt.py boututils/options.py boututils/plotdata.py boututils/plotpolslice.py boututils/radial_grid.py boututils/read_geqdsk.py boututils/run_wrapper.py boututils/showdata.py boututils/spectrogram.py boututils/surface_average.py boututils/volume_integral.py boututils/watch.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boututils/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/zoidberg
+ cp zoidberg/__init__.py zoidberg/boundary.py zoidberg/field.py zoidberg/fieldtracer.py zoidberg/grid.py zoidberg/plot.py zoidberg/poloidal_grid.py zoidberg/progress.py zoidberg/rzline.py zoidberg/test_field.py zoidberg/test_fieldtracer.py zoidberg/test_grid.py zoidberg/test_poloidal_grid.py zoidberg/test_rzline.py zoidberg/test_zoidberg.py zoidberg/zoidberg.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/zoidberg/
+ popd
~/build/BUILD/BOUT++-v4.3.2
++ ls build_mpich/manual build_openmpi/manual -d
++ head -n1
+ mandir=build_mpich/manual
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/doc/bout++/
+ rm -rf build_mpich/manual/html/.buildinfo
+ rm -rf build_mpich/manual/html/.doctrees
+ rm -rf build_mpich/manual/html/_sources
+ cp -r build_mpich/manual/html /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/doc/bout++/
+ for mpi in mpich openmpi
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/mpich/
+ install build_mpich/tools/pylib/boutcore.cpython-39-x86_64-linux-gnu.so /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/mpich/
+ for mpi in mpich openmpi
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/openmpi/
+ install build_openmpi/tools/pylib/boutcore.cpython-39-x86_64-linux-gnu.so /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/openmpi/
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64 libbout
+ /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 4.3.2-4.fc34 --unique-debug-suffix -4.3.2-4.fc34.x86_64 --unique-debug-src-base bout++-4.3.2-4.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BOUT++-v4.3.2
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libbout++.so.4.3.1
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libbout++.so.4.3.1
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libbout++.so.4.3.1
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libbout++.so.4.3.1
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/mpich/boutcore.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/mpich/boutcore.cpython-39-x86_64-linux-gnu.so
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/openmpi/boutcore.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/openmpi/boutcore.cpython-39-x86_64-linux-gnu.so
original debug info size: 320780kB, size after compression: 231800kB
/usr/lib/rpm/sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
16849 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib/debug/usr/lib64/python3.9 using /usr/bin/python3.9
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib/python3.9 using /usr/bin/python3.9
/usr/lib/python3.9/site-packages/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
/usr/lib/python3.9/site-packages/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
/usr/lib/python3.9/site-packages/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9 using /usr/bin/python3.9
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/geqdsk.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/boutgrid.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/anim.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/bout_runners/bout_runners.py is executable but has no shebang, removing executable bit
mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.38AnEv
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ pushd build_mpich
+ make -j2 build-check
make --no-print-directory -C tests/integrated
make --no-print-directory -C tests/MMS
  Compiling  wave.cxx
  Compiling  test_yupdown.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_yupdown
  Compiling  testVec.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
  Linking wave
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  wave.cxx
  Linking testVec
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking wave
  Compiling  fci_mms.cxx
  Linking test-twistshift
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking fci_mms
  Compiling  diffusion.cxx
  Linking test-twistshift
  Compiling  fuu.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Adding fuu.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/integrated/test-subdir/fuu.a
  Compiling  bar.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking cyto
  Adding bar.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/integrated/test-subdir/bar.a
  Compiling  subdirs.cxx
  Compiling  test_extras.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking subdirs
  Compiling  test_stopCheck.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_variant.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_stopCheck.cxx
  Compiling  sys/test_utils.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_solver.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_solver
  Compiling  sys/test_type_name.cxx
  Compiling  test_snb.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_timer.cxx
  Compiling  sys/test_range.cxx
  Linking test_snb
  Compiling  test_smooth.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_output.cxx
  Linking test_smooth
  Compiling  test_restarting.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_restarting
  Compiling  test-restart-io.cxx
  Compiling  sys/test_optionsreader.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-restart-io
  Compiling  test_region_iterator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_region_iterator
  Compiling  sys/test_options_netcdf.cxx
  Compiling  test_naulin_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_naulin_laplace
  Compiling  test_multigrid_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options_fields.cxx
  Linking test_multigrid_laplace
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
test_laplace.cxx: In function 'int main(int, char**)':
test_laplace.cxx:23:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   23 |   Field3D flag0 = invert_laplace(input, 0);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:24:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   24 |   Field3D flag3 = invert_laplace(input, 3);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:27:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   27 |   Field3D flag0a = invert_laplace(input, 0, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:28:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   28 |   Field3D flag3a = invert_laplace(input, 3, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:31:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   31 |   Field3D flag0ac = invert_laplace(input, 0, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:32:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   32 |   Field3D flag3ac = invert_laplace(input, 3, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:35:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   35 |   Field3D flag0ad = invert_laplace(input, 0, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:36:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   36 |   Field3D flag3ad = invert_laplace(input, 3, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:45:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   45 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:47:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   47 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:52:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   52 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:54:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   54 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:59:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   59 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:61:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   61 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:67:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   67 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:69:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   69 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Linking test_laplace
  Compiling  test_io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_io
  Compiling  test_invpar.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_invpar
  Compiling  invertable_operator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking invertable_operator
  Compiling  sys/test_msg_stack.cxx
  Compiling  test_interpolate.cxx
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:390,
                 from sys/test_msg_stack.cxx:4:
sys/test_msg_stack.cxx: In member function 'virtual void MsgStackTest_SetPointTest_Test::TestBody()':
sys/test_msg_stack.cxx:77:34: warning: 'int MsgStack::setPoint()' is deprecated: Please use `MsgStack::push` with an empty message instead [-Wdeprecated-declarations]
   77 |     EXPECT_EQ(msg_stack.setPoint(), i);
      |                                  ^
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:76:7: note: declared here
   76 |   int setPoint(); ///< get a message point
      |       ^~~~~~~~
  Compiling  sys/test_expressionparser.cxx
  Linking test_interpolate
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  sys/test_boutexception.cxx
  Compiling  test_gyro.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_gyro
  Compiling  src/test_bout++.cxx
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_fieldfactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solverfactory.cxx
  Linking test_fieldfactory
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solver.cxx
  Linking 2fluid
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_delp2.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_delp2
  Compiling  test_cyclic.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_cyclic
  Compiling  solver/test_fakesolver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-coordinates-initialization.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-coordinates-initialization
  Compiling  command-args.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_paralleltransform.cxx
  Linking command-args
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_interpolation.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_boutmesh.cxx
  Compiling  mesh/test_boundary_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/parallel/test_shiftedmetric.cxx
  Compiling  mesh/data/test_gridfromoptions.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert/test_fft.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_mask.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_interpolation_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_derivs.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_cyclic_reduction.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_traits.cxx
  Compiling  include/bout/test_template_combinations.cxx
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_monitor.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_macro_for_each.cxx
  Compiling  include/bout/test_generic_factory.cxx
  Compiling  include/bout/test_deriv_store.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_assert.cxx
  Compiling  include/bout/test_array.cxx
  Compiling  field/test_where.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector3d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector2d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_initialprofiles.cxx
  Compiling  field/test_fieldperp.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:445:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:445:19: note: use reference type to prevent copying
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:487:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:487:19: note: use reference type to prevent copying
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:529:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:529:19: note: use reference type to prevent copying
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_fieldperp.cxx:575:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:575:19: note: use reference type to prevent copying
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_fieldgroup.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field3d.cxx
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOX_Test::TestBody()':
field/test_field3d.cxx:549:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:549:19: note: use reference type to prevent copying
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOY_Test::TestBody()':
field/test_field3d.cxx:598:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:598:19: note: use reference type to prevent copying
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOZ_Test::TestBody()':
field/test_field3d.cxx:652:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:652:19: note: use reference type to prevent copying
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field3d.cxx:701:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:701:19: note: use reference type to prevent copying
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field3d.cxx:749:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:749:19: note: use reference type to prevent copying
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field3d.cxx:795:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:795:19: note: use reference type to prevent copying
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field3d.cxx:847:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:847:19: note: use reference type to prevent copying
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field2d.cxx
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field2d.cxx:538:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:538:19: note: use reference type to prevent copying
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field2d.cxx:581:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:581:19: note: use reference type to prevent copying
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field2d.cxx:623:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:623:19: note: use reference type to prevent copying
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field2d.cxx:668:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:668:19: note: use reference type to prevent copying
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling gtest-all.o
  Compiling bout_test_main.o
  Linking bout_test_main.a
  Linking tests
/usr/bin/ld: /tmp/ccDOKQEg.ltrans3.ltrans.o: in function `OutputTest::OutputTest()':
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ SEGFAULT_SIGNALS=segv
+ LD_PRELOAD=/usr/lib64/libSegFault.so
+ make check
  Linking tests
/usr/bin/ld: /tmp/cchprgmc.ltrans3.ltrans.o: in function `OutputTest::OutputTest()':
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
Running unit test
Running main() from bout_test_main.cxx
[==========] Running 1510 tests from 104 test suites.
[----------] Global test environment set-up.
[----------] 2 tests from ParseCommandLineArgsDeathTest
[----------] 2 tests from ParseCommandLineArgsDeathTest (7 ms total)
[----------] 1 test from SignalHandlerTestDeathTest (128 ms total)
[----------] 10 tests from FieldTest (3 ms total)
[----------] 78 tests from Field2DTest (39 ms total)
[----------] 126 tests from Field3DTest (34 ms total)
[----------] 47 tests from FieldFactoryCreationTest/0 (12 ms total)
[----------] 47 tests from FieldFactoryCreationTest/1 (12 ms total)
[----------] 28 tests from FieldFactoryTest (8 ms total)
[----------] 6 tests from FieldFactoryCreateAndTransformTest (1 ms total)
[----------] 26 tests from FieldGroupTest (1 ms total)
[----------] 96 tests from FieldPerpTest (21 ms total)
[----------] 10 tests from InitialProfileTest (3 ms total)
[ RUN      ] Vector2DTest.ApplyBoundaryString
	Option input:transform_from_field_aligned = 1 (default)
[----------] 46 tests from Vector2DTest (7 ms total)
[----------] 49 tests from Vector3DTest (8 ms total)
[----------] 10 tests from WhereTest (3 ms total)
[----------] 12 tests from ArrayTest (0 ms total)
[----------] 4 tests from AssertTest (0 ms total)
[----------] 25 tests from DerivativeStoreTest (10 ms total)
[----------] 6 tests from GenericFactory (0 ms total)
[----------] 3 tests from MacroForEachTest (0 ms total)
[----------] 3 tests from MacroForEachFnTest (0 ms total)
[----------] 2 tests from MonitorTest (0 ms total)
[----------] 33 tests from RegionTest (7 ms total)
[----------] 6 tests from RegionIndexConversionTest (0 ms total)
[----------] 2 tests from RegionIndex2DTest (0 ms total)
[----------] 2 tests from RegionIndex3DTest (0 ms total)
[----------] 21 tests from RegionIndexTest/0 (1 ms total)
[----------] 21 tests from RegionIndexTest/1 (0 ms total)
[----------] 21 tests from RegionIndexTest/2 (1 ms total)
[----------] 23 tests from FieldIndexTest/0 (0 ms total)
[----------] 23 tests from FieldIndexTest/1 (0 ms total)
[----------] 48 tests from IndexOffsetTest (3 ms total)
[----------] 5 tests from TemplateCombinationsTest (0 ms total)
[----------] 6 tests from BoutTraitsTest (0 ms total)
[----------] 3 tests from CyclicReduction (0 ms total)
[----------] 9 tests from InterpolationFactoryTest (2 ms total)
[----------] 11 tests from MaskTest (4 ms total)
[----------] 34 tests from GridFromOptionsTest (129 ms total)
[----------] 9 tests from ShiftedMetricTest (2 ms total)
[----------] 5 tests from BoundaryFactoryTest (0 ms total)
[----------] 2 tests from BoutMeshTest (5 ms total)
[----------] 4 tests from CoordinatesTest (1 ms total)
[----------] 16 tests from Field3DInterpToTest (1 ms total)
[----------] 8 tests from Field2DInterpToTest (1 ms total)
[----------] 24 tests from MeshTest (2 ms total)
[----------] 6 tests from ParallelTransformTest (1 ms total)
[----------] 46 tests from SolverTest (17 ms total)
[----------] 12 tests from SolverFactoryTest (1 ms total)
[----------] 20 tests from ParseCommandLineArgs (1 ms total)
[----------] 3 tests from PrintStartupTest (0 ms total)
[----------] 4 tests from BoutInitialiseFunctions (1 ms total)
[----------] 3 tests from BoutExceptionTest (2283 ms total)
[----------] 1 test from BoutRhsFailTest (1 ms total)
[----------] 2 tests from BoutParallelRhsFailTest (0 ms total)
[----------] 1 test from BoutIterationFailTest (0 ms total)
[----------] 29 tests from ExpressionParserTest (2 ms total)
[----------] 1 test from ParseExceptionTest (0 ms total)
[----------] 11 tests from MsgStackTest (0 ms total)
[----------] 95 tests from OptionsTest (20 ms total)
[----------] 12 tests from OptionsFieldTest (3 ms total)
[----------] 12 tests from OptionsNetCDFTest (22 ms total)
[----------] 20 tests from OptionsReaderTest (3 ms total)
[----------] 20 tests from OutputTest (1 ms total)
[----------] 25 tests from RangeTest (0 ms total)
[----------] 10 tests from TimerTest (17 ms total)
[----------] 6 tests from TypeNameTest (0 ms total)
[----------] 14 tests from MatrixTest (1 ms total)
[----------] 14 tests from TensorTest (1 ms total)
[----------] 4 tests from Invert3x3Test (0 ms total)
[----------] 13 tests from NumberUtilitiesTest (1 ms total)
[----------] 18 tests from StringUtilitiesTest (1 ms total)
[----------] 4 tests from FunctionTraitsTest (0 ms total)
[----------] 3 tests from VariantTest (0 ms total)
[----------] 5 tests from FirstX/DerivativesTest (2 ms total)
[----------] 5 tests from FirstY/DerivativesTest (3 ms total)
[----------] 6 tests from FirstZ/DerivativesTest (4 ms total)
[----------] 2 tests from SecondX/DerivativesTest (1 ms total)
[----------] 2 tests from SecondY/DerivativesTest (1 ms total)
[----------] 3 tests from SecondZ/DerivativesTest (1 ms total)
[----------] 1 test from FourthX/DerivativesTest (0 ms total)
[----------] 1 test from FourthY/DerivativesTest (0 ms total)
[----------] 1 test from FourthZ/DerivativesTest (1 ms total)
[----------] 6 tests from UpwindX/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindY/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxX/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxY/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from X/FirstDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from FirstY/FirstDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from FirstZ/FirstDerivativesInterfaceTest (2 ms total)
[----------] 2 tests from X/SecondDerivativesInterfaceTest (1 ms total)
[----------] 2 tests from Y/SecondDerivativesInterfaceTest (0 ms total)
[----------] 3 tests from Z/SecondDerivativesInterfaceTest (1 ms total)
[----------] 1 test from X/FourthDerivativesInterfaceTest (1 ms total)
[----------] 1 test from Y/FourthDerivativesInterfaceTest (0 ms total)
[----------] 1 test from Z/FourthDerivativesInterfaceTest (1 ms total)
[----------] 6 tests from X/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Y/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Z/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from X/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Y/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Z/FluxDerivativesInterfaceTest (2 ms total)
[----------] 10 tests from FFTEvenAndOddSamples/FFTTest (0 ms total)
[==========] 1510 tests from 104 test suites ran. (2882 ms total)
[  PASSED  ] 1510 tests.
======= Making 53 integrated tests ========
test-yupdown                     ✓   0.013 s
test-vec                         ✓   0.013 s
test-twistshift                  ✓   0.013 s
test-twistshift-staggered        ✓   0.013 s
test-subdir                      ✓   0.033 s
test-stopCheck                   ✓   0.013 s
test-stopCheck-file              ✓   0.013 s
test-squash                      S -  all_tests => False
test-solver                      ✓   0.013 s
test-snb                         ✓   0.013 s
test-smooth                      ✓   0.013 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   0.013 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   0.013 s
test-region-iterator             ✓   0.013 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   0.013 s
test-multigrid_laplace           ✓   0.013 s
test-laplace                     ✓   0.013 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓   0.013 s
test-invpar                      ✓   0.013 s
test-invertable-operator         ✓   0.013 s
test-interpolate                 ✓   0.013 s
test-interchange-instability     ✓   0.013 s
test-initial                     S -  not make => False
test-include                     S -  all_tests => False
test-gyro                        ✓   0.013 s
test-griddata                    ✓   0.013 s
test-griddata-yboundary-guards   ✓   0.013 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  S -  not make => False
test-fieldfactory                ✓   0.013 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓   0.013 s
test-delp2                       ✓   0.013 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   0.013 s
test-coordinates-initialization  ✓   0.013 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   0.013 s
test-collect                     S -  all_tests => False
test-code-style                  S -  not make => False
test-boutcore/simple-model       S -  not make => False
test-boutcore/mms-ddz            S -  not make => False
test-boutcore/legacy-model       S -  not make => False
test-boutcore/collect            S -  not make => False
test-boutcore/collect-staggered  S -  not make => False
test-attribs                     S -  all_tests => False
======= All tests passed in 0.43 seconds =======
======= Running 53 integrated tests ========
test-yupdown                     ✓   0.574 s
test-vec                         ✓   2.342 s
test-twistshift                  ✓   0.553 s
test-twistshift-staggered        ✓   0.540 s
test-subdir                      ✓   0.447 s
test-stopCheck                   ✓   0.030 s
test-stopCheck-file              ✓   2.573 s
test-squash                      S -  all_tests => False
test-solver                      ✓  18.958 s
test-snb                         ✓   0.271 s
test-smooth                      ✓   3.615 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   3.175 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   4.978 s
test-region-iterator             ✓   1.299 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   4.508 s
test-multigrid_laplace           ✓ 591.720 s
test-laplace                     ✓   6.312 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓  49.401 s
test-invpar                      ✓  20.374 s
test-invertable-operator         ✓   1.506 s
test-interpolate                 ✓   6.009 s
test-interchange-instability     ✓  15.727 s
test-initial                     ✓  22.042 s
test-include                     S -  all_tests => False
test-gyro                        ✓   2.621 s
test-griddata                    ✓   0.528 s
test-griddata-yboundary-guards   ✓  13.086 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  ✓   1.438 s
test-fieldfactory                ✓   2.914 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓  20.080 s
test-delp2                       ✓  98.804 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   8.599 s
test-coordinates-initialization  ✓   0.897 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   2.579 s
test-collect                     S -  all_tests => False
test-code-style                  ✓   0.067 s
test-boutcore/simple-model       ✓   0.752 s
test-boutcore/mms-ddz            ✓   0.359 s
test-boutcore/legacy-model       ✓   0.666 s
test-boutcore/collect            ✓   0.459 s
test-boutcore/collect-staggered  ✓   0.443 s
test-attribs                     S -  all_tests => False
======= All tests passed in 911.27 seconds =======
======= Making 21 MMS tests ========
wave-1d           ✓   0.013 s
wave-1d-y         ✓   0.013 s
upwinding3        S -  not make => False
time              S -  all_tests => False
time-petsc        S -  not make => False
spatial/fci       ✓   0.013 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   0.013 s
derivatives3      S -  not make => False
bracket           S -  not make => False
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False
======= All tests passed in 0.06 seconds =======
======= Running 21 MMS tests ========
wave-1d           ✓   3.280 s
wave-1d-y         ✓   3.271 s
upwinding3        ✓   1.637 s
time              S -  all_tests => False
time-petsc        S -  all_tests => False
spatial/fci       ✓   7.161 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   8.938 s
derivatives3      ✓   1.190 s
bracket           ✓   0.400 s
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False
======= All tests passed in 25.88 seconds =======
+ popd
~/build/BUILD/BOUT++-v4.3.2
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval unset 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ pushd build_openmpi
+ make -j2 build-check
make --no-print-directory -C tests/integrated
make --no-print-directory -C tests/MMS
  Compiling  wave.cxx
  Compiling  test_yupdown.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_yupdown
  Compiling  testVec.cxx
  Linking wave
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  wave.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking testVec
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking wave
  Compiling  fci_mms.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-twistshift
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking fci_mms
  Compiling  diffusion.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-twistshift
  Compiling  fuu.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Adding fuu.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/integrated/test-subdir/fuu.a
  Compiling  bar.cxx
  Linking cyto
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_extras.cxx
  Adding bar.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/integrated/test-subdir/bar.a
  Compiling  subdirs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking subdirs
  Compiling  sys/test_variant.cxx
  Compiling  test_stopCheck.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_utils.cxx
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_stopCheck.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_solver.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_type_name.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_timer.cxx
  Linking test_solver
  Compiling  sys/test_range.cxx
  Compiling  test_snb.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_output.cxx
  Linking test_snb
  Compiling  test_smooth.cxx
  Compiling  sys/test_optionsreader.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_smooth
  Compiling  test_restarting.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_restarting
  Compiling  sys/test_options_netcdf.cxx
  Compiling  test-restart-io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-restart-io
  Compiling  test_region_iterator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options_fields.cxx
  Linking test_region_iterator
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_naulin_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_naulin_laplace
  Compiling  test_multigrid_laplace.cxx
  Compiling  sys/test_options.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_multigrid_laplace
  Compiling  test_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
test_laplace.cxx: In function 'int main(int, char**)':
test_laplace.cxx:23:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   23 |   Field3D flag0 = invert_laplace(input, 0);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:24:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   24 |   Field3D flag3 = invert_laplace(input, 3);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:27:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   27 |   Field3D flag0a = invert_laplace(input, 0, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:28:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   28 |   Field3D flag3a = invert_laplace(input, 3, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:31:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   31 |   Field3D flag0ac = invert_laplace(input, 0, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:32:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   32 |   Field3D flag3ac = invert_laplace(input, 3, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:35:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   35 |   Field3D flag0ad = invert_laplace(input, 0, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:36:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   36 |   Field3D flag3ad = invert_laplace(input, 3, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:45:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   45 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:47:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   47 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:52:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   52 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:54:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   54 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:59:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   59 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:61:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   61 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:67:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   67 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:69:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   69 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Linking test_laplace
  Compiling  test_io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_io
  Compiling  sys/test_msg_stack.cxx
  Compiling  test_invpar.cxx
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:390,
                 from sys/test_msg_stack.cxx:4:
sys/test_msg_stack.cxx: In member function 'virtual void MsgStackTest_SetPointTest_Test::TestBody()':
sys/test_msg_stack.cxx:77:34: warning: 'int MsgStack::setPoint()' is deprecated: Please use `MsgStack::push` with an empty message instead [-Wdeprecated-declarations]
   77 |     EXPECT_EQ(msg_stack.setPoint(), i);
      |                                  ^
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:76:7: note: declared here
   76 |   int setPoint(); ///< get a message point
      |       ^~~~~~~~
  Compiling  sys/test_expressionparser.cxx
  Linking test_invpar
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invertable_operator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_boutexception.cxx
  Linking invertable_operator
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_interpolate.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  src/test_bout++.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_interpolate
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solverfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  test_gyro.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solver.cxx
  Linking test_gyro
  Compiling  test_griddata.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_fieldfactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_fieldfactory
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_fakesolver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  mesh/test_paralleltransform.cxx
  Compiling  test_delp2.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_delp2
  Compiling  mesh/test_mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_cyclic.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_cyclic
  Compiling  mesh/test_interpolation.cxx
  Compiling  test-coordinates-initialization.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-coordinates-initialization
  Compiling  command-args.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking command-args
  Compiling  mesh/test_coordinates.cxx
  Compiling  mesh/test_boutmesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_boundary_factory.cxx
  Compiling  mesh/parallel/test_shiftedmetric.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/data/test_gridfromoptions.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert/test_fft.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_mask.cxx
  Compiling  include/test_interpolation_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_derivs.cxx
  Compiling  include/test_cyclic_reduction.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_traits.cxx
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_template_combinations.cxx
  Compiling  include/bout/test_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_monitor.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_macro_for_each.cxx
  Compiling  include/bout/test_generic_factory.cxx
  Compiling  include/bout/test_deriv_store.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_assert.cxx
  Compiling  include/bout/test_array.cxx
  Compiling  field/test_where.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector3d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector2d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_initialprofiles.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_fieldperp.cxx
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:445:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:445:19: note: use reference type to prevent copying
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:487:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:487:19: note: use reference type to prevent copying
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:529:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:529:19: note: use reference type to prevent copying
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_fieldperp.cxx:575:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:575:19: note: use reference type to prevent copying
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_fieldgroup.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field3d.cxx
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOX_Test::TestBody()':
field/test_field3d.cxx:549:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:549:19: note: use reference type to prevent copying
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOY_Test::TestBody()':
field/test_field3d.cxx:598:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:598:19: note: use reference type to prevent copying
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOZ_Test::TestBody()':
field/test_field3d.cxx:652:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:652:19: note: use reference type to prevent copying
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field3d.cxx:701:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:701:19: note: use reference type to prevent copying
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field3d.cxx:749:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:749:19: note: use reference type to prevent copying
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field3d.cxx:795:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:795:19: note: use reference type to prevent copying
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field3d.cxx:847:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:847:19: note: use reference type to prevent copying
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field2d.cxx
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field2d.cxx:538:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:538:19: note: use reference type to prevent copying
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field2d.cxx:581:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:581:19: note: use reference type to prevent copying
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field2d.cxx:623:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:623:19: note: use reference type to prevent copying
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field2d.cxx:668:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:668:19: note: use reference type to prevent copying
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling gtest-all.o
  Compiling bout_test_main.o
  Linking bout_test_main.a
  Linking tests
/usr/bin/ld: /tmp/cceL968t.ltrans3.ltrans.o: in function `OutputTest::OutputTest() [clone .lto_priv.0]':
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ SEGFAULT_SIGNALS=segv
+ LD_PRELOAD=/usr/lib64/libSegFault.so
+ make check
  Linking tests
/usr/bin/ld: /tmp/ccrZcEbP.ltrans3.ltrans.o: in function `OutputTest::OutputTest() [clone .lto_priv.0]':
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
Running unit test
Running main() from bout_test_main.cxx
[==========] Running 1510 tests from 104 test suites.
[----------] Global test environment set-up.
[----------] 2 tests from ParseCommandLineArgsDeathTest
[----------] 2 tests from ParseCommandLineArgsDeathTest (8 ms total)
[----------] 1 test from SignalHandlerTestDeathTest (615 ms total)
[----------] 10 tests from FieldTest (2 ms total)
[----------] 78 tests from Field2DTest (514 ms total)
[----------] 126 tests from Field3DTest (35 ms total)
[----------] 47 tests from FieldFactoryCreationTest/0 (12 ms total)
[----------] 47 tests from FieldFactoryCreationTest/1 (12 ms total)
[----------] 28 tests from FieldFactoryTest (8 ms total)
[----------] 6 tests from FieldFactoryCreateAndTransformTest (1 ms total)
[----------] 26 tests from FieldGroupTest (1 ms total)
[----------] 96 tests from FieldPerpTest (21 ms total)
[----------] 10 tests from InitialProfileTest (3 ms total)
[ RUN      ] Vector2DTest.ApplyBoundaryString
	Option input:transform_from_field_aligned = 1 (default)
[----------] 46 tests from Vector2DTest (7 ms total)
[----------] 49 tests from Vector3DTest (9 ms total)
[----------] 10 tests from WhereTest (2 ms total)
[----------] 12 tests from ArrayTest (0 ms total)
[----------] 4 tests from AssertTest (1 ms total)
[----------] 25 tests from DerivativeStoreTest (9 ms total)
[----------] 6 tests from GenericFactory (0 ms total)
[----------] 3 tests from MacroForEachTest (0 ms total)
[----------] 3 tests from MacroForEachFnTest (0 ms total)
[----------] 2 tests from MonitorTest (1 ms total)
[----------] 33 tests from RegionTest (6 ms total)
[----------] 6 tests from RegionIndexConversionTest (0 ms total)
[----------] 2 tests from RegionIndex2DTest (1 ms total)
[----------] 2 tests from RegionIndex3DTest (0 ms total)
[----------] 21 tests from RegionIndexTest/0 (0 ms total)
[----------] 21 tests from RegionIndexTest/1 (0 ms total)
[----------] 21 tests from RegionIndexTest/2 (0 ms total)
[----------] 23 tests from FieldIndexTest/0 (1 ms total)
[----------] 23 tests from FieldIndexTest/1 (0 ms total)
[----------] 48 tests from IndexOffsetTest (3 ms total)
[----------] 5 tests from TemplateCombinationsTest (0 ms total)
[----------] 6 tests from BoutTraitsTest (0 ms total)
[----------] 3 tests from CyclicReduction (1 ms total)
[----------] 9 tests from InterpolationFactoryTest (2 ms total)
[----------] 11 tests from MaskTest (3 ms total)
[----------] 34 tests from GridFromOptionsTest (131 ms total)
[----------] 9 tests from ShiftedMetricTest (1 ms total)
[----------] 5 tests from BoundaryFactoryTest (0 ms total)
[----------] 2 tests from BoutMeshTest (5 ms total)
[----------] 4 tests from CoordinatesTest (1 ms total)
[----------] 16 tests from Field3DInterpToTest (0 ms total)
[----------] 8 tests from Field2DInterpToTest (0 ms total)
[----------] 24 tests from MeshTest (2 ms total)
[----------] 6 tests from ParallelTransformTest (1 ms total)
[----------] 46 tests from SolverTest (17 ms total)
[----------] 12 tests from SolverFactoryTest (1 ms total)
[----------] 20 tests from ParseCommandLineArgs (0 ms total)
[----------] 3 tests from PrintStartupTest (0 ms total)
[----------] 4 tests from BoutInitialiseFunctions (1 ms total)
[----------] 3 tests from BoutExceptionTest (2598 ms total)
[----------] 1 test from BoutRhsFailTest (0 ms total)
[----------] 2 tests from BoutParallelRhsFailTest (1 ms total)
[----------] 1 test from BoutIterationFailTest (0 ms total)
[----------] 29 tests from ExpressionParserTest (1 ms total)
[----------] 1 test from ParseExceptionTest (0 ms total)
[----------] 11 tests from MsgStackTest (1 ms total)
[----------] 95 tests from OptionsTest (20 ms total)
[----------] 12 tests from OptionsFieldTest (2 ms total)
[----------] 12 tests from OptionsNetCDFTest (22 ms total)
[----------] 20 tests from OptionsReaderTest (3 ms total)
[----------] 20 tests from OutputTest (1 ms total)
[----------] 25 tests from RangeTest (0 ms total)
[----------] 10 tests from TimerTest (17 ms total)
[----------] 6 tests from TypeNameTest (0 ms total)
[----------] 14 tests from MatrixTest (1 ms total)
[----------] 14 tests from TensorTest (1 ms total)
[----------] 4 tests from Invert3x3Test (0 ms total)
[----------] 13 tests from NumberUtilitiesTest (1 ms total)
[----------] 18 tests from StringUtilitiesTest (0 ms total)
[----------] 4 tests from FunctionTraitsTest (0 ms total)
[----------] 3 tests from VariantTest (0 ms total)
[----------] 5 tests from FirstX/DerivativesTest (3 ms total)
[----------] 5 tests from FirstY/DerivativesTest (3 ms total)
[----------] 6 tests from FirstZ/DerivativesTest (5 ms total)
[----------] 2 tests from SecondX/DerivativesTest (1 ms total)
[----------] 2 tests from SecondY/DerivativesTest (0 ms total)
[----------] 3 tests from SecondZ/DerivativesTest (2 ms total)
[----------] 1 test from FourthX/DerivativesTest (0 ms total)
[----------] 1 test from FourthY/DerivativesTest (0 ms total)
[----------] 1 test from FourthZ/DerivativesTest (1 ms total)
[----------] 6 tests from UpwindX/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindY/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxX/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxY/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from X/FirstDerivativesInterfaceTest (1 ms total)
[----------] 5 tests from FirstY/FirstDerivativesInterfaceTest (1 ms total)
[----------] 6 tests from FirstZ/FirstDerivativesInterfaceTest (2 ms total)
[----------] 2 tests from X/SecondDerivativesInterfaceTest (0 ms total)
[----------] 2 tests from Y/SecondDerivativesInterfaceTest (1 ms total)
[----------] 3 tests from Z/SecondDerivativesInterfaceTest (1 ms total)
[----------] 1 test from X/FourthDerivativesInterfaceTest (0 ms total)
[----------] 1 test from Y/FourthDerivativesInterfaceTest (1 ms total)
[----------] 1 test from Z/FourthDerivativesInterfaceTest (0 ms total)
[----------] 6 tests from X/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Y/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Z/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from X/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Y/FluxDerivativesInterfaceTest (1 ms total)
[----------] 5 tests from Z/FluxDerivativesInterfaceTest (2 ms total)
[----------] 10 tests from FFTEvenAndOddSamples/FFTTest (1 ms total)
[==========] 1510 tests from 104 test suites ran. (4159 ms total)
[  PASSED  ] 1510 tests.
======= Making 53 integrated tests ========
test-yupdown                     ✓   0.013 s
test-vec                         ✓   0.013 s
test-twistshift                  ✓   0.013 s
test-twistshift-staggered        ✓   0.013 s
test-subdir                      ✓   0.033 s
test-stopCheck                   ✓   0.013 s
test-stopCheck-file              ✓   0.013 s
test-squash                      S -  all_tests => False
test-solver                      ✓   0.013 s
test-snb                         ✓   0.013 s
test-smooth                      ✓   0.013 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   0.013 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   0.013 s
test-region-iterator             ✓   0.013 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   0.013 s
test-multigrid_laplace           ✓   0.013 s
test-laplace                     ✓   0.013 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓   0.013 s
test-invpar                      ✓   0.013 s
test-invertable-operator         ✓   0.013 s
test-interpolate                 ✓   0.013 s
test-interchange-instability     ✓   0.013 s
test-initial                     S -  not make => False
test-include                     S -  all_tests => False
test-gyro                        ✓   0.013 s
test-griddata                    ✓   0.013 s
test-griddata-yboundary-guards   ✓   0.013 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  S -  not make => False
test-fieldfactory                ✓   0.013 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓   0.013 s
test-delp2                       ✓   0.013 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   0.013 s
test-coordinates-initialization  ✓   0.013 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   0.013 s
test-collect                     S -  all_tests => False
test-code-style                  S -  not make => False
test-boutcore/simple-model       S -  not make => False
test-boutcore/mms-ddz            S -  not make => False
test-boutcore/legacy-model       S -  not make => False
test-boutcore/collect            S -  not make => False
test-boutcore/collect-staggered  S -  not make => False
test-attribs                     S -  all_tests => False
======= All tests passed in 0.43 seconds =======
======= Running 53 integrated tests ========
test-yupdown                     ✓   1.109 s
test-vec                         ✓   2.163 s
test-twistshift                  ✓   1.084 s
test-twistshift-staggered        ✓   1.073 s
test-subdir                      ✓   0.983 s
test-stopCheck                   ✓   0.032 s
test-stopCheck-file              ✓   6.766 s
test-squash                      S -  all_tests => False
test-solver                      ✓  19.521 s
test-snb                         ✓   0.815 s
test-smooth                      ✓   5.285 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   5.881 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   6.391 s
test-region-iterator             ✓   2.377 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   4.339 s
test-multigrid_laplace           ✓   7.653 s
test-laplace                     ✓   8.607 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓  57.611 s
test-invpar                      ✓  30.928 s
test-invertable-operator         ✓   2.521 s
test-interpolate                 ✓  12.411 s
test-interchange-instability     ✓  17.221 s
test-initial                     ✓  25.287 s
test-include                     S -  all_tests => False
test-gyro                        ✓   3.909 s
test-griddata                    ✓   1.068 s
test-griddata-yboundary-guards   ✓  13.262 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  ✓   1.368 s
test-fieldfactory                ✓   4.097 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓  21.821 s
test-delp2                       ✓  25.091 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓  13.877 s
test-coordinates-initialization  ✓   0.862 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   8.054 s
test-collect                     S -  all_tests => False
test-code-style                  ✓   0.067 s
test-boutcore/simple-model       ✓   1.300 s
test-boutcore/mms-ddz            ✓   0.895 s
test-boutcore/legacy-model       ✓   1.206 s
test-boutcore/collect            ✓   0.995 s
test-boutcore/collect-staggered  ✓   0.987 s
test-attribs                     S -  all_tests => False
======= All tests passed in 318.94 seconds =======
======= Making 21 MMS tests ========
wave-1d           ✓   0.013 s
wave-1d-y         ✓   0.013 s
upwinding3        S -  not make => False
time              S -  all_tests => False
time-petsc        S -  not make => False
spatial/fci       ✓   0.013 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   0.013 s
derivatives3      S -  not make => False
bracket           S -  not make => False
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False
======= All tests passed in 0.06 seconds =======
======= Running 21 MMS tests ========
wave-1d           ✓   6.498 s
wave-1d-y         ✓   6.520 s
upwinding3        ✓   2.194 s
time              S -  all_tests => False
time-petsc        S -  all_tests => False
spatial/fci       ✓  12.916 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓  21.437 s
derivatives3      ✓   1.646 s
bracket           ✓   0.945 s
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False
======= All tests passed in 52.16 seconds =======
+ popd
~/build/BUILD/BOUT++-v4.3.2
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
unset' 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
Processing files: bout++-mpich-4.3.2-4.fc34.x86_64
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.k4cvPm
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Z8rafz
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-mpich = 4.3.2-4.fc34 bout++-mpich(x86-64) = 4.3.2-4.fc34 bundled(libpvode) libbout++.so.4.3.1()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Recommends: environment-modules
Processing files: bout++-mpich-devel-4.3.2-4.fc34.x86_64
Provides: bout++-mpich-devel = 4.3.2-4.fc34 bout++-mpich-devel(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.4.3.1()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel
Processing files: python3-bout++-mpich-4.3.2-4.fc34.x86_64
Provides: python-bout++-mpich = 4.3.2-4.fc34 python3-bout++-mpich = 4.3.2-4.fc34 python3-bout++-mpich(x86-64) = 4.3.2-4.fc34 python3.9-bout++-mpich = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.103()(64bit)(mpich-x86_64) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.15()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.14()(64bit)(mpich-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.4()(64bit)(mpich-x86_64) libsundials_cvode.so.5()(64bit)(mpich-x86_64) libsundials_ida.so.5()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.5()(64bit)(mpich-x86_64) python(abi) = 3.9 rtld(GNU_HASH)
Obsoletes: python-bout++-mpich < 4.3.2-4.fc34
Processing files: bout++-openmpi-4.3.2-4.fc34.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.8p3CyA
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2X03GB
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-openmpi = 4.3.2-4.fc34 bout++-openmpi(x86-64) = 4.3.2-4.fc34 bundled(libpvode) libbout++.so.4.3.1()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Recommends: environment-modules
Processing files: bout++-openmpi-devel-4.3.2-4.fc34.x86_64
Provides: bout++-openmpi-devel = 4.3.2-4.fc34 bout++-openmpi-devel(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.4.3.1()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel
Processing files: python3-bout++-openmpi-4.3.2-4.fc34.x86_64
Provides: python-bout++-openmpi = 4.3.2-4.fc34 python3-bout++-openmpi = 4.3.2-4.fc34 python3-bout++-openmpi(x86-64) = 4.3.2-4.fc34 python3.9-bout++-openmpi = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.103()(64bit)(openmpi-x86_64) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.15()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.14()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.4()(64bit)(openmpi-x86_64) libsundials_cvode.so.5()(64bit)(openmpi-x86_64) libsundials_ida.so.5()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.5()(64bit)(openmpi-x86_64) python(abi) = 3.9 rtld(GNU_HASH)
Obsoletes: python-bout++-openmpi < 4.3.2-4.fc34
Processing files: bout++-common-4.3.2-4.fc34.x86_64
Provides: bout++-common = 4.3.2-4.fc34 bout++-common(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-bout++-4.3.2-4.fc34.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.VtD754
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.luLrfA
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-bout++ = 4.3.2-4.fc34 python-bout_runners = 4.3.2-4.fc34 python-boutdata = 4.3.2-4.fc34 python-boututils = 4.3.2-4.fc34 python-zoidberg = 4.3.2-4.fc34 python3-bout++ = 4.3.2-4.fc34 python3-bout_runners python3-boutdata python3-boututils python3-zoidberg python3.9-bout++ = 4.3.2-4.fc34 python3.9-bout_runners = 4.3.2-4.fc34 python3.9-boutdata = 4.3.2-4.fc34 python3.9-boututils = 4.3.2-4.fc34 python3.9-zoidberg = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.9
Obsoletes: python-bout++ < 4.3.2-4.fc34 python-bout_runners < 4.3.2-4.fc34 python-boutdata < 4.3.2-4.fc34 python-boututils < 4.3.2-4.fc34 python-zoidberg < 4.3.2-4.fc34
Recommends: python3-matplotlib python3-scipy
Processing files: bout++-doc-4.3.2-4.fc34.noarch
Provides: bout++-doc = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debugsource-4.3.2-4.fc34.x86_64
Provides: bout++-debugsource = 4.3.2-4.fc34 bout++-debugsource(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-debuginfo = 4.3.2-4.fc34 bout++-debuginfo(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-mpich-debuginfo = 4.3.2-4.fc34 bout++-mpich-debuginfo(x86-64) = 4.3.2-4.fc34 debuginfo(build-id) = 1cd1f50477f3d48eee28715c57991e25d0e86b05 debuginfo(build-id) = 44bbe8bbe034c6ced637bba7c3a26ae24a7d0d72 debuginfo(build-id) = be9ed6d113341bcd65c6af492704aa9813a9fa3d
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: python3-bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64
Provides: debuginfo(build-id) = bfc2121bd075349e22de391e7e69233196aa3cec python-bout++-mpich-debuginfo = 4.3.2-4.fc34 python3-bout++-mpich-debuginfo = 4.3.2-4.fc34 python3-bout++-mpich-debuginfo(x86-64) = 4.3.2-4.fc34 python3.9-bout++-mpich-debuginfo = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-openmpi-debuginfo = 4.3.2-4.fc34 bout++-openmpi-debuginfo(x86-64) = 4.3.2-4.fc34 debuginfo(build-id) = 03d96ffc99f57548d6dc8ae7f241ca6e1c98b36e debuginfo(build-id) = 3f948c32c16770856777dccc99c32e7187f1d2ca debuginfo(build-id) = cec127a7d69a86b1ce99abe5a7a6515fb9b0d963
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: python3-bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64
Provides: debuginfo(build-id) = 12b52740fabb9a5fb0f465d35db44bccd5de979a python-bout++-openmpi-debuginfo = 4.3.2-4.fc34 python3-bout++-openmpi-debuginfo = 4.3.2-4.fc34 python3-bout++-openmpi-debuginfo(x86-64) = 4.3.2-4.fc34 python3.9-bout++-openmpi-debuginfo = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debugsource-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-doc-4.3.2-4.fc34.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-4.3.2-4.fc34.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-devel-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-common-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-devel-4.3.2-4.fc34.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.RI45iD
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0