Warning: Permanently added '100.24.115.29' (ECDSA) to the list of known hosts.
Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1885770 --chroot fedora-rawhide-x86_64 --detached
Version: 0.44
Task:
{'bootstrap': 'off',
 'build_id': 1885770,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-x86_64',
 'enable_net': False,
 'git_hash': 'bbf5d41bedd7f7e619c2fa278b3e2b98e58d06e2',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-0.29_py38/bout++.git',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'bout++',
 'package_version': '4.3.2-4.fc33',
 'project_dirname': 'Cython-0.29_py38',
 'project_name': 'Cython-0.29_py38',
 'project_owner': 'dormouse',
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dormouse/Cython-0.29_py38/fedora-rawhide-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository'},
           {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/',
            'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch',
            'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}],
 'sandbox': 'dormouse/Cython-0.29_py38--https://src.fedoraproject.org/user/davidsch',
 'source_json': {},
 'source_type': None,
 'submitter': 'https://src.fedoraproject.org/user/davidsch',
 'task_id': '1885770-fedora-rawhide-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-0.29_py38/bout++.git /tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++ --depth 500 --no-single-branch

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-0.29_py38/bout++.git', '/tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++', '--depth', '500', '--no-single-branch']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++'...

Running: git checkout bbf5d41bedd7f7e619c2fa278b3e2b98e58d06e2

cmd: ['git', 'checkout', 'bbf5d41bedd7f7e619c2fa278b3e2b98e58d06e2']
cwd: /tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++
rc: 0
stdout: 
stderr: Note: switching to 'bbf5d41bedd7f7e619c2fa278b3e2b98e58d06e2'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at bbf5d41 automatic import of bout++

Running: copr-distgit-client sources

cmd: ['copr-distgit-client', 'sources']
cwd: /tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++
rc: 0
stdout: 
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading BOUT++-v4.3.2.tar.gz
INFO: Calling: curl -H Pragma: -o BOUT++-v4.3.2.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/dormouse/Cython-0.29_py38/bout++/BOUT++-v4.3.2.tar.gz/md5/0e68f99862bf9e26db4adb5040d68745/BOUT++-v4.3.2.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 18.3M  100 18.3M    0     0  40.7M      0 --:--:-- --:--:-- --:--:-- 40.6M
INFO: Reading stdout from command: md5sum BOUT++-v4.3.2.tar.gz

Running (timeout=18000): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++/bout++.spec --sources /tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1610893659.312021 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 2.8 starting (python version = 3.9.0, NVR = mock-2.8-1.fc33)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++/bout++.spec)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1610893659.312021/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 2.8
INFO: Mock Version: 2.8
Start: dnf install
No matches found for the following disable plugin patterns: local, spacewalk
Copr repository                                 4.3 MB/s | 1.5 MB     00:00    
Additional repo http_kojipkgs_fedoraproject_org  50 MB/s |  56 MB     00:01    
fedora                                           27 MB/s |  73 MB     00:02    
Dependencies resolved.
========================================================================================================================================
 Package                         Arch    Version                    Repository                                                      Size
========================================================================================================================================
Installing group/module packages:
 bash                            x86_64  5.1.0-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.7 M
 bzip2                           x86_64  1.0.8-4.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   52 k
 coreutils                       x86_64  8.32-15.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 cpio                            x86_64  2.13-8.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  273 k
 diffutils                       x86_64  3.7-7.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  390 k
 fedora-release-common           noarch  34-0.10                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   20 k
 findutils                       x86_64  1:4.8.0-1.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  545 k
 gawk                            x86_64  5.1.0-2.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 glibc-minimal-langpack          x86_64  2.32.9000-26.fc34          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  110 k
 grep                            x86_64  3.6-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  260 k
 gzip                            x86_64  1.10-3.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  152 k
 info                            x86_64  6.7-8.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  228 k
 make                            x86_64  1:4.3-2.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  539 k
 patch                           x86_64  2.7.6-13.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  129 k
 redhat-rpm-config               noarch  178-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   65 k
 rpm-build                       x86_64  4.16.1.2-1.fc34            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   96 k
 sed                             x86_64  4.8-6.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  298 k
 shadow-utils                    x86_64  2:4.8.1-6.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.2 M
 tar                             x86_64  2:1.32-6.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  880 k
 unzip                           x86_64  6.0-49.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  181 k
 util-linux                      x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.5 M
 which                           x86_64  2.21-20.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   41 k
 xz                              x86_64  5.2.5-4.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  215 k
Installing dependencies:
 alternatives                    x86_64  1.14-3.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   36 k
 audit-libs                      x86_64  3.0-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  113 k
 basesystem                      noarch  11-10.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  6.8 k
 binutils                        x86_64  2.35.1-21.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  5.3 M
 binutils-gold                   x86_64  2.35.1-21.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  747 k
 bzip2-libs                      x86_64  1.0.8-4.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   40 k
 ca-certificates                 noarch  2020.2.41-6.fc34           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  353 k
 coreutils-common                x86_64  8.32-15.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 cracklib                        x86_64  2.9.6-24.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   83 k
 crypto-policies                 noarch  20200918-1.git85dccc5.fc34 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   57 k
 curl                            x86_64  7.74.0-2.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  300 k
 cyrus-sasl-lib                  x86_64  2.1.27-6.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  101 k
 dwz                             x86_64  0.13-4.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  106 k
 ed                              x86_64  1.14.2-9.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   75 k
 efi-srpm-macros                 noarch  4-5.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   21 k
 elfutils                        x86_64  0.182-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  525 k
 elfutils-debuginfod-client      x86_64  0.182-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   32 k
 elfutils-default-yama-scope     noarch  0.182-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   16 k
 elfutils-libelf                 x86_64  0.182-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  193 k
 elfutils-libs                   x86_64  0.182-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  265 k
 expat                           x86_64  2.2.10-1.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  104 k
 fedora-gpg-keys                 noarch  34-0.8                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  107 k
 fedora-release                  noarch  34-0.10                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 fedora-release-identity-basic   noarch  34-0.10                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   12 k
 fedora-repos                    noarch  34-0.8                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 fedora-repos-rawhide            noarch  34-0.8                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   10 k
 file                            x86_64  5.39-4.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   51 k
 file-libs                       x86_64  5.39-4.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  591 k
 filesystem                      x86_64  3.14-4.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 fonts-srpm-macros               noarch  1:2.0.5-4.fc33             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 fpc-srpm-macros                 noarch  1.3-2.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.6 k
 gc                              x86_64  8.0.4-4.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  104 k
 gdb-minimal                     x86_64  10.1-2.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.6 M
 ghc-srpm-macros                 noarch  1.5.0-3.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.7 k
 glibc                           x86_64  2.32.9000-26.fc34          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.5 M
 glibc-common                    x86_64  2.32.9000-26.fc34          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.1 M
 gmp                             x86_64  1:6.2.0-5.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  320 k
 gnat-srpm-macros                noarch  4-12.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.2 k
 go-srpm-macros                  noarch  3.0.9-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   25 k
 guile22                         x86_64  2.2.7-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  6.5 M
 kernel-srpm-macros              noarch  1.0-3.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.2 k
 keyutils-libs                   x86_64  1.6.1-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 k
 krb5-libs                       x86_64  1.19-0.beta2.1.fc34        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  734 k
 libacl                          x86_64  2.2.53-9.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   23 k
 libarchive                      x86_64  3.5.1-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  391 k
 libattr                         x86_64  2.4.48-10.fc33             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   18 k
 libblkid                        x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  100 k
 libbrotli                       x86_64  1.0.9-3.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  322 k
 libcap                          x86_64  2.44-1.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   60 k
 libcap-ng                       x86_64  0.8.2-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   32 k
 libcom_err                      x86_64  1.45.6-4.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 libcurl                         x86_64  7.74.0-2.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  285 k
 libdb                           x86_64  5.3.28-45.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  760 k
 libeconf                        x86_64  0.3.8-4.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   24 k
 libfdisk                        x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  151 k
 libffi                          x86_64  3.1-27.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   33 k
 libgcc                          x86_64  11.0.0-0.13.fc34           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   88 k
 libgcrypt                       x86_64  1.8.7-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  476 k
 libgomp                         x86_64  11.0.0-0.13.fc34           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  257 k
 libgpg-error                    x86_64  1.41-1.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  212 k
 libidn2                         x86_64  2.3.0-4.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  104 k
 libmetalink                     x86_64  0.1.3-13.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 k
 libmount                        x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  131 k
 libnghttp2                      x86_64  1.42.0-1.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   76 k
 libnsl2                         x86_64  1.3.0-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   58 k
 libpkgconf                      x86_64  1.7.3-5.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   36 k
 libpsl                          x86_64  0.21.1-2.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   61 k
 libpwquality                    x86_64  1.4.4-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  104 k
 libselinux                      x86_64  3.1-6.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   84 k
 libsemanage                     x86_64  3.1-6.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  116 k
 libsepol                        x86_64  3.1-5.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  283 k
 libsigsegv                      x86_64  2.11-11.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   26 k
 libsmartcols                    x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   59 k
 libssh                          x86_64  0.9.5-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  209 k
 libssh-config                   noarch  0.9.5-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 libstdc++                       x86_64  11.0.0-0.13.fc34           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  693 k
 libtasn1                        x86_64  4.16.0-3.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   75 k
 libtirpc                        x86_64  1.3.1-0.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   95 k
 libtool-ltdl                    x86_64  2.4.6-38.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   36 k
 libunistring                    x86_64  0.9.10-9.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  516 k
 libutempter                     x86_64  1.2.1-3.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   26 k
 libuuid                         x86_64  2.36.1-3.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   24 k
 libverto                        x86_64  0.3.0-11.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   21 k
 libxcrypt                       x86_64  4.4.17-1.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  121 k
 libxml2                         x86_64  2.9.10-9.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  744 k
 libzstd                         x86_64  1.4.7-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  340 k
 lua-libs                        x86_64  5.4.2-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  216 k
 lua-srpm-macros                 noarch  1-2.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.9 k
 lz4-libs                        x86_64  1.9.3-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   67 k
 mpfr                            x86_64  4.1.0-2.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.4 M
 ncurses-base                    noarch  6.2-3.20200222.fc33        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   60 k
 ncurses-libs                    x86_64  6.2-3.20200222.fc33        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  329 k
 nim-srpm-macros                 noarch  3-3.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.3 k
 ocaml-srpm-macros               noarch  6-3.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.7 k
 openblas-srpm-macros            noarch  2-8.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.2 k
 openldap                        x86_64  2.4.56-4.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  260 k
 openssl-libs                    x86_64  1:1.1.1i-1.fc34            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.4 M
 p11-kit                         x86_64  0.23.22-1.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  369 k
 p11-kit-trust                   x86_64  0.23.22-1.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  141 k
 pam                             x86_64  1.5.1-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  545 k
 pcre                            x86_64  8.44-3.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  200 k
 pcre2                           x86_64  10.36-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  234 k
 pcre2-syntax                    noarch  10.36-2.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  143 k
 perl-srpm-macros                noarch  1-38.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.3 k
 pkgconf                         x86_64  1.7.3-5.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   41 k
 pkgconf-m4                      noarch  1.7.3-5.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   14 k
 pkgconf-pkg-config              x86_64  1.7.3-5.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   10 k
 popt                            x86_64  1.18-2.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   59 k
 publicsuffix-list-dafsa         noarch  20190417-4.fc33            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   55 k
 python-srpm-macros              noarch  3.9-11.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   20 k
 qt5-srpm-macros                 noarch  5.15.2-1.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.4 k
 readline                        x86_64  8.1-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  216 k
 rpm                             x86_64  4.16.1.2-1.fc34            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  501 k
 rpm-build-libs                  x86_64  4.16.1.2-1.fc34            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   97 k
 rpm-libs                        x86_64  4.16.1.2-1.fc34            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  327 k
 rust-srpm-macros                noarch  17-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  9.8 k
 setup                           noarch  2.13.7-2.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  142 k
 sqlite-libs                     x86_64  3.34.0-1.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  626 k
 systemd-libs                    x86_64  247.2-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  546 k
 tzdata                          noarch  2020f-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  432 k
 xxhash-libs                     x86_64  0.8.0-1.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   41 k
 xz-libs                         x86_64  5.2.5-4.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   91 k
 zip                             x86_64  3.0-27.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  258 k
 zlib                            x86_64  1.2.11-23.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   92 k
 zstd                            x86_64  1.4.7-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  568 k
Installing Groups:
 Buildsystem building group                                                                                                             

Transaction Summary
========================================================================================================================================
Install  148 Packages

Total download size: 58 M
Installed size: 225 M
Downloading Packages:
(1/148): basesystem-11-10.fc33.noarch.rpm       190 kB/s | 6.8 kB     00:00    
(2/148): audit-libs-3.0-1.fc34.x86_64.rpm       2.8 MB/s | 113 kB     00:00    
(3/148): alternatives-1.14-3.fc33.x86_64.rpm    775 kB/s |  36 kB     00:00    
(4/148): binutils-gold-2.35.1-21.fc34.x86_64.rp  12 MB/s | 747 kB     00:00    
(5/148): bash-5.1.0-1.fc34.x86_64.rpm            20 MB/s | 1.7 MB     00:00    
(6/148): bzip2-1.0.8-4.fc33.x86_64.rpm          3.6 MB/s |  52 kB     00:00    
(7/148): bzip2-libs-1.0.8-4.fc33.x86_64.rpm     5.5 MB/s |  40 kB     00:00    
(8/148): ca-certificates-2020.2.41-6.fc34.noarc  17 MB/s | 353 kB     00:00    
(9/148): coreutils-8.32-15.fc34.x86_64.rpm       20 MB/s | 1.1 MB     00:00    
(10/148): cpio-2.13-8.fc33.x86_64.rpm            15 MB/s | 273 kB     00:00    
(11/148): cracklib-2.9.6-24.fc33.x86_64.rpm     8.9 MB/s |  83 kB     00:00    
(12/148): crypto-policies-20200918-1.git85dccc5 7.6 MB/s |  57 kB     00:00    
(13/148): coreutils-common-8.32-15.fc34.x86_64.  20 MB/s | 2.0 MB     00:00    
(14/148): curl-7.74.0-2.fc34.x86_64.rpm          12 MB/s | 300 kB     00:00    
(15/148): cyrus-sasl-lib-2.1.27-6.fc33.x86_64.r 9.4 MB/s | 101 kB     00:00    
(16/148): dwz-0.13-4.fc33.x86_64.rpm             12 MB/s | 106 kB     00:00    
(17/148): diffutils-3.7-7.fc34.x86_64.rpm        18 MB/s | 390 kB     00:00    
(18/148): ed-1.14.2-9.fc33.x86_64.rpm            12 MB/s |  75 kB     00:00    
(19/148): efi-srpm-macros-4-5.fc33.noarch.rpm   4.7 MB/s |  21 kB     00:00    
(20/148): elfutils-debuginfod-client-0.182-2.fc 5.9 MB/s |  32 kB     00:00    
(21/148): binutils-2.35.1-21.fc34.x86_64.rpm     20 MB/s | 5.3 MB     00:00    
(22/148): elfutils-default-yama-scope-0.182-2.f 703 kB/s |  16 kB     00:00    
(23/148): elfutils-libelf-0.182-2.fc34.x86_64.r  16 MB/s | 193 kB     00:00    
(24/148): elfutils-0.182-2.fc34.x86_64.rpm       11 MB/s | 525 kB     00:00    
(25/148): elfutils-libs-0.182-2.fc34.x86_64.rpm  16 MB/s | 265 kB     00:00    
(26/148): expat-2.2.10-1.fc34.x86_64.rpm         12 MB/s | 104 kB     00:00    
(27/148): fedora-release-34-0.10.noarch.rpm     2.3 MB/s |  11 kB     00:00    
(28/148): fedora-release-common-34-0.10.noarch. 4.2 MB/s |  20 kB     00:00    
(29/148): fedora-gpg-keys-34-0.8.noarch.rpm      11 MB/s | 107 kB     00:00    
(30/148): fedora-release-identity-basic-34-0.10 2.4 MB/s |  12 kB     00:00    
(31/148): fedora-repos-34-0.8.noarch.rpm        2.5 MB/s |  11 kB     00:00    
(32/148): fedora-repos-rawhide-34-0.8.noarch.rp 2.1 MB/s |  10 kB     00:00    
(33/148): file-5.39-4.fc34.x86_64.rpm           7.9 MB/s |  51 kB     00:00    
(34/148): file-libs-5.39-4.fc34.x86_64.rpm       20 MB/s | 591 kB     00:00    
(35/148): findutils-4.8.0-1.fc34.x86_64.rpm      18 MB/s | 545 kB     00:00    
(36/148): fonts-srpm-macros-2.0.5-4.fc33.noarch 4.7 MB/s |  27 kB     00:00    
(37/148): fpc-srpm-macros-1.3-2.fc33.noarch.rpm 1.6 MB/s | 7.6 kB     00:00    
(38/148): gc-8.0.4-4.fc33.x86_64.rpm             12 MB/s | 104 kB     00:00    
(39/148): filesystem-3.14-4.fc34.x86_64.rpm      19 MB/s | 1.1 MB     00:00    
(40/148): ghc-srpm-macros-1.5.0-3.fc33.noarch.r 1.7 MB/s | 7.7 kB     00:00    
(41/148): gawk-5.1.0-2.fc33.x86_64.rpm           18 MB/s | 1.0 MB     00:00    
(42/148): glibc-common-2.32.9000-26.fc34.x86_64  21 MB/s | 2.1 MB     00:00    
(43/148): glibc-minimal-langpack-2.32.9000-26.f  13 MB/s | 110 kB     00:00    
(44/148): gdb-minimal-10.1-2.fc34.x86_64.rpm     20 MB/s | 3.6 MB     00:00    
(45/148): gmp-6.2.0-5.fc34.x86_64.rpm            11 MB/s | 320 kB     00:00    
(46/148): glibc-2.32.9000-26.fc34.x86_64.rpm     20 MB/s | 3.5 MB     00:00    
(47/148): gnat-srpm-macros-4-12.fc33.noarch.rpm 458 kB/s | 8.2 kB     00:00    
(48/148): go-srpm-macros-3.0.9-1.fc34.noarch.rp 1.3 MB/s |  25 kB     00:00    
(49/148): gzip-1.10-3.fc33.x86_64.rpm            13 MB/s | 152 kB     00:00    
(50/148): grep-3.6-1.fc34.x86_64.rpm             14 MB/s | 260 kB     00:00    
(51/148): kernel-srpm-macros-1.0-3.fc33.noarch. 1.8 MB/s | 7.2 kB     00:00    
(52/148): info-6.7-8.fc33.x86_64.rpm             16 MB/s | 228 kB     00:00    
(53/148): keyutils-libs-1.6.1-1.fc34.x86_64.rpm 4.8 MB/s |  31 kB     00:00    
(54/148): libacl-2.2.53-9.fc34.x86_64.rpm       4.9 MB/s |  23 kB     00:00    
(55/148): libarchive-3.5.1-1.fc34.x86_64.rpm     18 MB/s | 391 kB     00:00    
(56/148): libattr-2.4.48-10.fc33.x86_64.rpm     4.0 MB/s |  18 kB     00:00    
(57/148): krb5-libs-1.19-0.beta2.1.fc34.x86_64.  19 MB/s | 734 kB     00:00    
(58/148): libblkid-2.36.1-3.fc34.x86_64.rpm     8.4 MB/s | 100 kB     00:00    
(59/148): libcap-2.44-1.fc34.x86_64.rpm         9.5 MB/s |  60 kB     00:00    
(60/148): libbrotli-1.0.9-3.fc34.x86_64.rpm      17 MB/s | 322 kB     00:00    
(61/148): libcap-ng-0.8.2-1.fc34.x86_64.rpm     6.6 MB/s |  32 kB     00:00    
(62/148): libcom_err-1.45.6-4.fc33.x86_64.rpm   4.8 MB/s |  27 kB     00:00    
(63/148): libcurl-7.74.0-2.fc34.x86_64.rpm       14 MB/s | 285 kB     00:00    
(64/148): libeconf-0.3.8-4.fc33.x86_64.rpm      4.8 MB/s |  24 kB     00:00    
(65/148): libfdisk-2.36.1-3.fc34.x86_64.rpm      15 MB/s | 151 kB     00:00    
(66/148): libdb-5.3.28-45.fc34.x86_64.rpm        19 MB/s | 760 kB     00:00    
(67/148): libffi-3.1-27.fc34.x86_64.rpm         3.6 MB/s |  33 kB     00:00    
(68/148): libgcc-11.0.0-0.13.fc34.x86_64.rpm     11 MB/s |  88 kB     00:00    
(69/148): libgomp-11.0.0-0.13.fc34.x86_64.rpm    17 MB/s | 257 kB     00:00    
(70/148): libgcrypt-1.8.7-1.fc34.x86_64.rpm      17 MB/s | 476 kB     00:00    
(71/148): libgpg-error-1.41-1.fc34.x86_64.rpm    15 MB/s | 212 kB     00:00    
(72/148): libidn2-2.3.0-4.fc34.x86_64.rpm        11 MB/s | 104 kB     00:00    
(73/148): libmetalink-0.1.3-13.fc33.x86_64.rpm  5.3 MB/s |  31 kB     00:00    
(74/148): libmount-2.36.1-3.fc34.x86_64.rpm      13 MB/s | 131 kB     00:00    
(75/148): libnghttp2-1.42.0-1.fc34.x86_64.rpm   9.6 MB/s |  76 kB     00:00    
(76/148): libnsl2-1.3.0-1.fc34.x86_64.rpm        10 MB/s |  58 kB     00:00    
(77/148): libpkgconf-1.7.3-5.fc34.x86_64.rpm    6.7 MB/s |  36 kB     00:00    
(78/148): libpsl-0.21.1-2.fc33.x86_64.rpm       8.5 MB/s |  61 kB     00:00    
(79/148): libpwquality-1.4.4-1.fc34.x86_64.rpm   12 MB/s | 104 kB     00:00    
(80/148): libselinux-3.1-6.fc34.x86_64.rpm       12 MB/s |  84 kB     00:00    
(81/148): libsemanage-3.1-6.fc34.x86_64.rpm      13 MB/s | 116 kB     00:00    
(82/148): libsigsegv-2.11-11.fc33.x86_64.rpm    5.0 MB/s |  26 kB     00:00    
(83/148): libsepol-3.1-5.fc34.x86_64.rpm         16 MB/s | 283 kB     00:00    
(84/148): libsmartcols-2.36.1-3.fc34.x86_64.rpm 8.0 MB/s |  59 kB     00:00    
(85/148): libssh-config-0.9.5-1.fc34.noarch.rpm 2.2 MB/s |  11 kB     00:00    
(86/148): libssh-0.9.5-1.fc34.x86_64.rpm         16 MB/s | 209 kB     00:00    
(87/148): libtasn1-4.16.0-3.fc33.x86_64.rpm     9.1 MB/s |  75 kB     00:00    
(88/148): libtirpc-1.3.1-0.fc34.x86_64.rpm       14 MB/s |  95 kB     00:00    
(89/148): libtool-ltdl-2.4.6-38.fc34.x86_64.rpm 7.6 MB/s |  36 kB     00:00    
(90/148): libstdc++-11.0.0-0.13.fc34.x86_64.rpm  22 MB/s | 693 kB     00:00    
(91/148): libutempter-1.2.1-3.fc34.x86_64.rpm   4.8 MB/s |  26 kB     00:00    
(92/148): libuuid-2.36.1-3.fc34.x86_64.rpm      3.9 MB/s |  24 kB     00:00    
(93/148): guile22-2.2.7-1.fc34.x86_64.rpm        22 MB/s | 6.5 MB     00:00    
(94/148): libverto-0.3.0-11.fc34.x86_64.rpm     783 kB/s |  21 kB     00:00    
(95/148): libunistring-0.9.10-9.fc33.x86_64.rpm  10 MB/s | 516 kB     00:00    
(96/148): libxcrypt-4.4.17-1.fc34.x86_64.rpm    8.7 MB/s | 121 kB     00:00    
(97/148): libzstd-1.4.7-1.fc34.x86_64.rpm        14 MB/s | 340 kB     00:00    
(98/148): lua-srpm-macros-1-2.fc34.noarch.rpm   2.2 MB/s | 7.9 kB     00:00    
(99/148): libxml2-2.9.10-9.fc34.x86_64.rpm       17 MB/s | 744 kB     00:00    
(100/148): lz4-libs-1.9.3-1.fc34.x86_64.rpm     7.4 MB/s |  67 kB     00:00    
(101/148): lua-libs-5.4.2-1.fc34.x86_64.rpm     6.3 MB/s | 216 kB     00:00    
(102/148): ncurses-base-6.2-3.20200222.fc33.noa 7.0 MB/s |  60 kB     00:00    
(103/148): make-4.3-2.fc33.x86_64.rpm            17 MB/s | 539 kB     00:00    
(104/148): ncurses-libs-6.2-3.20200222.fc33.x86  15 MB/s | 329 kB     00:00    
(105/148): nim-srpm-macros-3-3.fc33.noarch.rpm  1.3 MB/s | 8.3 kB     00:00    
(106/148): ocaml-srpm-macros-6-3.fc33.noarch.rp 1.9 MB/s | 7.7 kB     00:00    
(107/148): openblas-srpm-macros-2-8.fc33.noarch 1.8 MB/s | 7.2 kB     00:00    
(108/148): openldap-2.4.56-4.fc34.x86_64.rpm     15 MB/s | 260 kB     00:00    
(109/148): mpfr-4.1.0-2.fc33.x86_64.rpm          19 MB/s | 1.4 MB     00:00    
(110/148): p11-kit-0.23.22-1.fc34.x86_64.rpm     12 MB/s | 369 kB     00:00    
(111/148): p11-kit-trust-0.23.22-1.fc34.x86_64. 5.1 MB/s | 141 kB     00:00    
(112/148): patch-2.7.6-13.fc33.x86_64.rpm        14 MB/s | 129 kB     00:00    
(113/148): pam-1.5.1-2.fc34.x86_64.rpm           19 MB/s | 545 kB     00:00    
(114/148): pcre-8.44-3.fc34.x86_64.rpm           13 MB/s | 200 kB     00:00    
(115/148): pcre2-10.36-2.fc34.x86_64.rpm         18 MB/s | 234 kB     00:00    
(116/148): openssl-libs-1.1.1i-1.fc34.x86_64.rp  15 MB/s | 1.4 MB     00:00    
(117/148): pcre2-syntax-10.36-2.fc34.noarch.rpm 9.6 MB/s | 143 kB     00:00    
(118/148): perl-srpm-macros-1-38.fc33.noarch.rp 778 kB/s | 8.3 kB     00:00    
(119/148): pkgconf-1.7.3-5.fc34.x86_64.rpm      6.8 MB/s |  41 kB     00:00    
(120/148): pkgconf-m4-1.7.3-5.fc34.noarch.rpm   3.4 MB/s |  14 kB     00:00    
(121/148): pkgconf-pkg-config-1.7.3-5.fc34.x86_ 2.2 MB/s |  10 kB     00:00    
(122/148): popt-1.18-2.fc34.x86_64.rpm           11 MB/s |  59 kB     00:00    
(123/148): publicsuffix-list-dafsa-20190417-4.f 9.1 MB/s |  55 kB     00:00    
(124/148): python-srpm-macros-3.9-11.fc34.noarc 4.0 MB/s |  20 kB     00:00    
(125/148): qt5-srpm-macros-5.15.2-1.fc34.noarch 2.1 MB/s | 8.4 kB     00:00    
(126/148): redhat-rpm-config-178-1.fc34.noarch. 8.1 MB/s |  65 kB     00:00    
(127/148): readline-8.1-1.fc34.x86_64.rpm        15 MB/s | 216 kB     00:00    
(128/148): rpm-build-4.16.1.2-1.fc34.x86_64.rpm  11 MB/s |  96 kB     00:00    
(129/148): rpm-build-libs-4.16.1.2-1.fc34.x86_6  13 MB/s |  97 kB     00:00    
(130/148): rpm-4.16.1.2-1.fc34.x86_64.rpm        19 MB/s | 501 kB     00:00    
(131/148): rust-srpm-macros-17-1.fc34.noarch.rp 1.6 MB/s | 9.8 kB     00:00    
(132/148): rpm-libs-4.16.1.2-1.fc34.x86_64.rpm   18 MB/s | 327 kB     00:00    
(133/148): sed-4.8-6.fc34.x86_64.rpm             18 MB/s | 298 kB     00:00    
(134/148): setup-2.13.7-2.fc33.noarch.rpm       8.0 MB/s | 142 kB     00:00    
(135/148): sqlite-libs-3.34.0-1.fc34.x86_64.rpm  21 MB/s | 626 kB     00:00    
(136/148): systemd-libs-247.2-1.fc34.x86_64.rpm  18 MB/s | 546 kB     00:00    
(137/148): shadow-utils-4.8.1-6.fc34.x86_64.rpm  20 MB/s | 1.2 MB     00:00    
(138/148): tzdata-2020f-1.fc34.noarch.rpm        15 MB/s | 432 kB     00:00    
(139/148): unzip-6.0-49.fc33.x86_64.rpm          15 MB/s | 181 kB     00:00    
(140/148): tar-1.32-6.fc33.x86_64.rpm            19 MB/s | 880 kB     00:00    
(141/148): which-2.21-20.fc33.x86_64.rpm        4.0 MB/s |  41 kB     00:00    
(142/148): xxhash-libs-0.8.0-1.fc33.x86_64.rpm  7.1 MB/s |  41 kB     00:00    
(143/148): xz-5.2.5-4.fc34.x86_64.rpm            17 MB/s | 215 kB     00:00    
(144/148): xz-libs-5.2.5-4.fc34.x86_64.rpm      9.3 MB/s |  91 kB     00:00    
(145/148): zlib-1.2.11-23.fc34.x86_64.rpm        10 MB/s |  92 kB     00:00    
(146/148): zip-3.0-27.fc33.x86_64.rpm            17 MB/s | 258 kB     00:00    
(147/148): zstd-1.4.7-1.fc34.x86_64.rpm          29 MB/s | 568 kB     00:00    
(148/148): util-linux-2.36.1-3.fc34.x86_64.rpm   32 MB/s | 2.5 MB     00:00    
--------------------------------------------------------------------------------
Total                                            45 MB/s |  58 MB     00:01     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.14-4.fc34.x86_64                          1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-11.0.0-0.13.fc34.x86_64                       1/148 
  Running scriptlet: libgcc-11.0.0-0.13.fc34.x86_64                       1/148 
  Installing       : crypto-policies-20200918-1.git85dccc5.fc34.noarc     2/148 
  Running scriptlet: crypto-policies-20200918-1.git85dccc5.fc34.noarc     2/148 
  Installing       : fedora-release-identity-basic-34-0.10.noarch         3/148 
  Installing       : tzdata-2020f-1.fc34.noarch                           4/148 
  Installing       : rust-srpm-macros-17-1.fc34.noarch                    5/148 
  Installing       : qt5-srpm-macros-5.15.2-1.fc34.noarch                 6/148 
  Installing       : publicsuffix-list-dafsa-20190417-4.fc33.noarch       7/148 
  Installing       : pkgconf-m4-1.7.3-5.fc34.noarch                       8/148 
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  Verifying        : patch-2.7.6-13.fc33.x86_64                         114/148 
  Verifying        : pcre-8.44-3.fc34.x86_64                            115/148 
  Verifying        : pcre2-10.36-2.fc34.x86_64                          116/148 
  Verifying        : pcre2-syntax-10.36-2.fc34.noarch                   117/148 
  Verifying        : perl-srpm-macros-1-38.fc33.noarch                  118/148 
  Verifying        : pkgconf-1.7.3-5.fc34.x86_64                        119/148 
  Verifying        : pkgconf-m4-1.7.3-5.fc34.noarch                     120/148 
  Verifying        : pkgconf-pkg-config-1.7.3-5.fc34.x86_64             121/148 
  Verifying        : popt-1.18-2.fc34.x86_64                            122/148 
  Verifying        : publicsuffix-list-dafsa-20190417-4.fc33.noarch     123/148 
  Verifying        : python-srpm-macros-3.9-11.fc34.noarch              124/148 
  Verifying        : qt5-srpm-macros-5.15.2-1.fc34.noarch               125/148 
  Verifying        : readline-8.1-1.fc34.x86_64                         126/148 
  Verifying        : redhat-rpm-config-178-1.fc34.noarch                127/148 
  Verifying        : rpm-4.16.1.2-1.fc34.x86_64                         128/148 
  Verifying        : rpm-build-4.16.1.2-1.fc34.x86_64                   129/148 
  Verifying        : rpm-build-libs-4.16.1.2-1.fc34.x86_64              130/148 
  Verifying        : rpm-libs-4.16.1.2-1.fc34.x86_64                    131/148 
  Verifying        : rust-srpm-macros-17-1.fc34.noarch                  132/148 
  Verifying        : sed-4.8-6.fc34.x86_64                              133/148 
  Verifying        : setup-2.13.7-2.fc33.noarch                         134/148 
  Verifying        : shadow-utils-2:4.8.1-6.fc34.x86_64                 135/148 
  Verifying        : sqlite-libs-3.34.0-1.fc34.x86_64                   136/148 
  Verifying        : systemd-libs-247.2-1.fc34.x86_64                   137/148 
  Verifying        : tar-2:1.32-6.fc33.x86_64                           138/148 
  Verifying        : tzdata-2020f-1.fc34.noarch                         139/148 
  Verifying        : unzip-6.0-49.fc33.x86_64                           140/148 
  Verifying        : util-linux-2.36.1-3.fc34.x86_64                    141/148 
  Verifying        : which-2.21-20.fc33.x86_64                          142/148 
  Verifying        : xxhash-libs-0.8.0-1.fc33.x86_64                    143/148 
  Verifying        : xz-5.2.5-4.fc34.x86_64                             144/148 
  Verifying        : xz-libs-5.2.5-4.fc34.x86_64                        145/148 
  Verifying        : zip-3.0-27.fc33.x86_64                             146/148 
  Verifying        : zlib-1.2.11-23.fc34.x86_64                         147/148 
  Verifying        : zstd-1.4.7-1.fc34.x86_64                           148/148 

Installed:
  alternatives-1.14-3.fc33.x86_64                                               
  audit-libs-3.0-1.fc34.x86_64                                                  
  basesystem-11-10.fc33.noarch                                                  
  bash-5.1.0-1.fc34.x86_64                                                      
  binutils-2.35.1-21.fc34.x86_64                                                
  binutils-gold-2.35.1-21.fc34.x86_64                                           
  bzip2-1.0.8-4.fc33.x86_64                                                     
  bzip2-libs-1.0.8-4.fc33.x86_64                                                
  ca-certificates-2020.2.41-6.fc34.noarch                                       
  coreutils-8.32-15.fc34.x86_64                                                 
  coreutils-common-8.32-15.fc34.x86_64                                          
  cpio-2.13-8.fc33.x86_64                                                       
  cracklib-2.9.6-24.fc33.x86_64                                                 
  crypto-policies-20200918-1.git85dccc5.fc34.noarch                             
  curl-7.74.0-2.fc34.x86_64                                                     
  cyrus-sasl-lib-2.1.27-6.fc33.x86_64                                           
  diffutils-3.7-7.fc34.x86_64                                                   
  dwz-0.13-4.fc33.x86_64                                                        
  ed-1.14.2-9.fc33.x86_64                                                       
  efi-srpm-macros-4-5.fc33.noarch                                               
  elfutils-0.182-2.fc34.x86_64                                                  
  elfutils-debuginfod-client-0.182-2.fc34.x86_64                                
  elfutils-default-yama-scope-0.182-2.fc34.noarch                               
  elfutils-libelf-0.182-2.fc34.x86_64                                           
  elfutils-libs-0.182-2.fc34.x86_64                                             
  expat-2.2.10-1.fc34.x86_64                                                    
  fedora-gpg-keys-34-0.8.noarch                                                 
  fedora-release-34-0.10.noarch                                                 
  fedora-release-common-34-0.10.noarch                                          
  fedora-release-identity-basic-34-0.10.noarch                                  
  fedora-repos-34-0.8.noarch                                                    
  fedora-repos-rawhide-34-0.8.noarch                                            
  file-5.39-4.fc34.x86_64                                                       
  file-libs-5.39-4.fc34.x86_64                                                  
  filesystem-3.14-4.fc34.x86_64                                                 
  findutils-1:4.8.0-1.fc34.x86_64                                               
  fonts-srpm-macros-1:2.0.5-4.fc33.noarch                                       
  fpc-srpm-macros-1.3-2.fc33.noarch                                             
  gawk-5.1.0-2.fc33.x86_64                                                      
  gc-8.0.4-4.fc33.x86_64                                                        
  gdb-minimal-10.1-2.fc34.x86_64                                                
  ghc-srpm-macros-1.5.0-3.fc33.noarch                                           
  glibc-2.32.9000-26.fc34.x86_64                                                
  glibc-common-2.32.9000-26.fc34.x86_64                                         
  glibc-minimal-langpack-2.32.9000-26.fc34.x86_64                               
  gmp-1:6.2.0-5.fc34.x86_64                                                     
  gnat-srpm-macros-4-12.fc33.noarch                                             
  go-srpm-macros-3.0.9-1.fc34.noarch                                            
  grep-3.6-1.fc34.x86_64                                                        
  guile22-2.2.7-1.fc34.x86_64                                                   
  gzip-1.10-3.fc33.x86_64                                                       
  info-6.7-8.fc33.x86_64                                                        
  kernel-srpm-macros-1.0-3.fc33.noarch                                          
  keyutils-libs-1.6.1-1.fc34.x86_64                                             
  krb5-libs-1.19-0.beta2.1.fc34.x86_64                                          
  libacl-2.2.53-9.fc34.x86_64                                                   
  libarchive-3.5.1-1.fc34.x86_64                                                
  libattr-2.4.48-10.fc33.x86_64                                                 
  libblkid-2.36.1-3.fc34.x86_64                                                 
  libbrotli-1.0.9-3.fc34.x86_64                                                 
  libcap-2.44-1.fc34.x86_64                                                     
  libcap-ng-0.8.2-1.fc34.x86_64                                                 
  libcom_err-1.45.6-4.fc33.x86_64                                               
  libcurl-7.74.0-2.fc34.x86_64                                                  
  libdb-5.3.28-45.fc34.x86_64                                                   
  libeconf-0.3.8-4.fc33.x86_64                                                  
  libfdisk-2.36.1-3.fc34.x86_64                                                 
  libffi-3.1-27.fc34.x86_64                                                     
  libgcc-11.0.0-0.13.fc34.x86_64                                                
  libgcrypt-1.8.7-1.fc34.x86_64                                                 
  libgomp-11.0.0-0.13.fc34.x86_64                                               
  libgpg-error-1.41-1.fc34.x86_64                                               
  libidn2-2.3.0-4.fc34.x86_64                                                   
  libmetalink-0.1.3-13.fc33.x86_64                                              
  libmount-2.36.1-3.fc34.x86_64                                                 
  libnghttp2-1.42.0-1.fc34.x86_64                                               
  libnsl2-1.3.0-1.fc34.x86_64                                                   
  libpkgconf-1.7.3-5.fc34.x86_64                                                
  libpsl-0.21.1-2.fc33.x86_64                                                   
  libpwquality-1.4.4-1.fc34.x86_64                                              
  libselinux-3.1-6.fc34.x86_64                                                  
  libsemanage-3.1-6.fc34.x86_64                                                 
  libsepol-3.1-5.fc34.x86_64                                                    
  libsigsegv-2.11-11.fc33.x86_64                                                
  libsmartcols-2.36.1-3.fc34.x86_64                                             
  libssh-0.9.5-1.fc34.x86_64                                                    
  libssh-config-0.9.5-1.fc34.noarch                                             
  libstdc++-11.0.0-0.13.fc34.x86_64                                             
  libtasn1-4.16.0-3.fc33.x86_64                                                 
  libtirpc-1.3.1-0.fc34.x86_64                                                  
  libtool-ltdl-2.4.6-38.fc34.x86_64                                             
  libunistring-0.9.10-9.fc33.x86_64                                             
  libutempter-1.2.1-3.fc34.x86_64                                               
  libuuid-2.36.1-3.fc34.x86_64                                                  
  libverto-0.3.0-11.fc34.x86_64                                                 
  libxcrypt-4.4.17-1.fc34.x86_64                                                
  libxml2-2.9.10-9.fc34.x86_64                                                  
  libzstd-1.4.7-1.fc34.x86_64                                                   
  lua-libs-5.4.2-1.fc34.x86_64                                                  
  lua-srpm-macros-1-2.fc34.noarch                                               
  lz4-libs-1.9.3-1.fc34.x86_64                                                  
  make-1:4.3-2.fc33.x86_64                                                      
  mpfr-4.1.0-2.fc33.x86_64                                                      
  ncurses-base-6.2-3.20200222.fc33.noarch                                       
  ncurses-libs-6.2-3.20200222.fc33.x86_64                                       
  nim-srpm-macros-3-3.fc33.noarch                                               
  ocaml-srpm-macros-6-3.fc33.noarch                                             
  openblas-srpm-macros-2-8.fc33.noarch                                          
  openldap-2.4.56-4.fc34.x86_64                                                 
  openssl-libs-1:1.1.1i-1.fc34.x86_64                                           
  p11-kit-0.23.22-1.fc34.x86_64                                                 
  p11-kit-trust-0.23.22-1.fc34.x86_64                                           
  pam-1.5.1-2.fc34.x86_64                                                       
  patch-2.7.6-13.fc33.x86_64                                                    
  pcre-8.44-3.fc34.x86_64                                                       
  pcre2-10.36-2.fc34.x86_64                                                     
  pcre2-syntax-10.36-2.fc34.noarch                                              
  perl-srpm-macros-1-38.fc33.noarch                                             
  pkgconf-1.7.3-5.fc34.x86_64                                                   
  pkgconf-m4-1.7.3-5.fc34.noarch                                                
  pkgconf-pkg-config-1.7.3-5.fc34.x86_64                                        
  popt-1.18-2.fc34.x86_64                                                       
  publicsuffix-list-dafsa-20190417-4.fc33.noarch                                
  python-srpm-macros-3.9-11.fc34.noarch                                         
  qt5-srpm-macros-5.15.2-1.fc34.noarch                                          
  readline-8.1-1.fc34.x86_64                                                    
  redhat-rpm-config-178-1.fc34.noarch                                           
  rpm-4.16.1.2-1.fc34.x86_64                                                    
  rpm-build-4.16.1.2-1.fc34.x86_64                                              
  rpm-build-libs-4.16.1.2-1.fc34.x86_64                                         
  rpm-libs-4.16.1.2-1.fc34.x86_64                                               
  rust-srpm-macros-17-1.fc34.noarch                                             
  sed-4.8-6.fc34.x86_64                                                         
  setup-2.13.7-2.fc33.noarch                                                    
  shadow-utils-2:4.8.1-6.fc34.x86_64                                            
  sqlite-libs-3.34.0-1.fc34.x86_64                                              
  systemd-libs-247.2-1.fc34.x86_64                                              
  tar-2:1.32-6.fc33.x86_64                                                      
  tzdata-2020f-1.fc34.noarch                                                    
  unzip-6.0-49.fc33.x86_64                                                      
  util-linux-2.36.1-3.fc34.x86_64                                               
  which-2.21-20.fc33.x86_64                                                     
  xxhash-libs-0.8.0-1.fc33.x86_64                                               
  xz-5.2.5-4.fc34.x86_64                                                        
  xz-libs-5.2.5-4.fc34.x86_64                                                   
  zip-3.0-27.fc33.x86_64                                                        
  zlib-1.2.11-23.fc34.x86_64                                                    
  zstd-1.4.7-1.fc34.x86_64                                                      

Complete!
Finish: dnf install
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: pkgconf-pkg-config-1.7.3-5.fc34.x86_64
kernel-srpm-macros-1.0-3.fc33.noarch
fedora-repos-34-0.8.noarch
efi-srpm-macros-4-5.fc33.noarch
pcre-8.44-3.fc34.x86_64
elfutils-default-yama-scope-0.182-2.fc34.noarch
p11-kit-0.23.22-1.fc34.x86_64
util-linux-2.36.1-3.fc34.x86_64
libssh-config-0.9.5-1.fc34.noarch
python-srpm-macros-3.9-11.fc34.noarch
filesystem-3.14-4.fc34.x86_64
libdb-5.3.28-45.fc34.x86_64
curl-7.74.0-2.fc34.x86_64
libunistring-0.9.10-9.fc33.x86_64
glibc-common-2.32.9000-26.fc34.x86_64
libbrotli-1.0.9-3.fc34.x86_64
libcurl-7.74.0-2.fc34.x86_64
libtool-ltdl-2.4.6-38.fc34.x86_64
fonts-srpm-macros-2.0.5-4.fc33.noarch
rpm-build-4.16.1.2-1.fc34.x86_64
pkgconf-m4-1.7.3-5.fc34.noarch
libuuid-2.36.1-3.fc34.x86_64
libpwquality-1.4.4-1.fc34.x86_64
xz-libs-5.2.5-4.fc34.x86_64
zlib-1.2.11-23.fc34.x86_64
p11-kit-trust-0.23.22-1.fc34.x86_64
elfutils-0.182-2.fc34.x86_64
rpm-build-libs-4.16.1.2-1.fc34.x86_64
keyutils-libs-1.6.1-1.fc34.x86_64
info-6.7-8.fc33.x86_64
libzstd-1.4.7-1.fc34.x86_64
libffi-3.1-27.fc34.x86_64
redhat-rpm-config-178-1.fc34.noarch
popt-1.18-2.fc34.x86_64
elfutils-libs-0.182-2.fc34.x86_64
fpc-srpm-macros-1.3-2.fc33.noarch
elfutils-libelf-0.182-2.fc34.x86_64
xz-5.2.5-4.fc34.x86_64
cracklib-2.9.6-24.fc33.x86_64
libsepol-3.1-5.fc34.x86_64
findutils-4.8.0-1.fc34.x86_64
bzip2-1.0.8-4.fc33.x86_64
libpkgconf-1.7.3-5.fc34.x86_64
perl-srpm-macros-1-38.fc33.noarch
rpm-4.16.1.2-1.fc34.x86_64
ca-certificates-2020.2.41-6.fc34.noarch
mpfr-4.1.0-2.fc33.x86_64
libidn2-2.3.0-4.fc34.x86_64
libssh-0.9.5-1.fc34.x86_64
pam-1.5.1-2.fc34.x86_64
sqlite-libs-3.34.0-1.fc34.x86_64
expat-2.2.10-1.fc34.x86_64
libverto-0.3.0-11.fc34.x86_64
fedora-gpg-keys-34-0.8.noarch
libsmartcols-2.36.1-3.fc34.x86_64
libutempter-1.2.1-3.fc34.x86_64
file-5.39-4.fc34.x86_64
coreutils-common-8.32-15.fc34.x86_64
lua-libs-5.4.2-1.fc34.x86_64
tzdata-2020f-1.fc34.noarch
gawk-5.1.0-2.fc33.x86_64
lua-srpm-macros-1-2.fc34.noarch
libsemanage-3.1-6.fc34.x86_64
libtasn1-4.16.0-3.fc33.x86_64
crypto-policies-20200918-1.git85dccc5.fc34.noarch
alternatives-1.14-3.fc33.x86_64
libfdisk-2.36.1-3.fc34.x86_64
bzip2-libs-1.0.8-4.fc33.x86_64
pkgconf-1.7.3-5.fc34.x86_64
libxcrypt-4.4.17-1.fc34.x86_64
krb5-libs-1.19-0.beta2.1.fc34.x86_64
readline-8.1-1.fc34.x86_64
diffutils-3.7-7.fc34.x86_64
make-4.3-2.fc33.x86_64
cpio-2.13-8.fc33.x86_64
gzip-1.10-3.fc33.x86_64
openldap-2.4.56-4.fc34.x86_64
audit-libs-3.0-1.fc34.x86_64
fedora-release-identity-basic-34-0.10.noarch
lz4-libs-1.9.3-1.fc34.x86_64
libcap-2.44-1.fc34.x86_64
shadow-utils-4.8.1-6.fc34.x86_64
grep-3.6-1.fc34.x86_64
libcom_err-1.45.6-4.fc33.x86_64
openssl-libs-1.1.1i-1.fc34.x86_64
qt5-srpm-macros-5.15.2-1.fc34.noarch
file-libs-5.39-4.fc34.x86_64
libacl-2.2.53-9.fc34.x86_64
publicsuffix-list-dafsa-20190417-4.fc33.noarch
nim-srpm-macros-3-3.fc33.noarch
gc-8.0.4-4.fc33.x86_64
rpm-libs-4.16.1.2-1.fc34.x86_64
elfutils-debuginfod-client-0.182-2.fc34.x86_64
ncurses-libs-6.2-3.20200222.fc33.x86_64
rust-srpm-macros-17-1.fc34.noarch
libgpg-error-1.41-1.fc34.x86_64
fedora-release-34-0.10.noarch
bash-5.1.0-1.fc34.x86_64
libattr-2.4.48-10.fc33.x86_64
libnsl2-1.3.0-1.fc34.x86_64
binutils-2.35.1-21.fc34.x86_64
gmp-6.2.0-5.fc34.x86_64
dwz-0.13-4.fc33.x86_64
libsigsegv-2.11-11.fc33.x86_64
libgomp-11.0.0-0.13.fc34.x86_64
which-2.21-20.fc33.x86_64
binutils-gold-2.35.1-21.fc34.x86_64
gdb-minimal-10.1-2.fc34.x86_64
systemd-libs-247.2-1.fc34.x86_64
go-srpm-macros-3.0.9-1.fc34.noarch
sed-4.8-6.fc34.x86_64
ocaml-srpm-macros-6-3.fc33.noarch
ncurses-base-6.2-3.20200222.fc33.noarch
libeconf-0.3.8-4.fc33.x86_64
libtirpc-1.3.1-0.fc34.x86_64
openblas-srpm-macros-2-8.fc33.noarch
libpsl-0.21.1-2.fc33.x86_64
libstdc++-11.0.0-0.13.fc34.x86_64
coreutils-8.32-15.fc34.x86_64
ed-1.14.2-9.fc33.x86_64
libnghttp2-1.42.0-1.fc34.x86_64
zstd-1.4.7-1.fc34.x86_64
glibc-minimal-langpack-2.32.9000-26.fc34.x86_64
xxhash-libs-0.8.0-1.fc33.x86_64
ghc-srpm-macros-1.5.0-3.fc33.noarch
glibc-2.32.9000-26.fc34.x86_64
libxml2-2.9.10-9.fc34.x86_64
guile22-2.2.7-1.fc34.x86_64
fedora-repos-rawhide-34-0.8.noarch
basesystem-11-10.fc33.noarch
setup-2.13.7-2.fc33.noarch
libgcrypt-1.8.7-1.fc34.x86_64
libmetalink-0.1.3-13.fc33.x86_64
libgcc-11.0.0-0.13.fc34.x86_64
patch-2.7.6-13.fc33.x86_64
libblkid-2.36.1-3.fc34.x86_64
libmount-2.36.1-3.fc34.x86_64
cyrus-sasl-lib-2.1.27-6.fc33.x86_64
libarchive-3.5.1-1.fc34.x86_64
pcre2-syntax-10.36-2.fc34.noarch
unzip-6.0-49.fc33.x86_64
libselinux-3.1-6.fc34.x86_64
fedora-release-common-34-0.10.noarch
zip-3.0-27.fc33.x86_64
tar-1.32-6.fc33.x86_64
libcap-ng-0.8.2-1.fc34.x86_64
gnat-srpm-macros-4-12.fc33.noarch
pcre2-10.36-2.fc34.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1610841600
Wrote: /builddir/build/SRPMS/bout++-4.3.2-4.fc34.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1610893659.312021/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1610893659.312021/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1610893659.312021/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/tmp/copr-rpmbuild-3758e8q1/obtain-sources/bout++/bout++.spec) Config(child) 1 minutes 8 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/bout++-4.3.2-4.fc34.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1610893728.649060 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 2.8 starting (python version = 3.9.0, NVR = mock-2.8-1.fc33)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/results/bout++-4.3.2-4.fc34.src.rpm)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 2.8
INFO: Mock Version: 2.8
Start: dnf update
No matches found for the following disable plugin patterns: local, spacewalk
Copr repository                                  97 kB/s | 3.7 kB     00:00    
Additional repo http_kojipkgs_fedoraproject_org 177 kB/s | 3.8 kB     00:00    
fedora                                           93 kB/s |  12 kB     00:00    
Dependencies resolved.
Nothing to do.
Complete!
Finish: dnf update
Finish: chroot init
Start: build phase for bout++-4.3.2-4.fc34.src.rpm
Start: build setup for bout++-4.3.2-4.fc34.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1610841600
Wrote: /builddir/build/SRPMS/bout++-4.3.2-4.fc34.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk
Copr repository                                 206 kB/s | 3.7 kB     00:00    
Additional repo http_kojipkgs_fedoraproject_org 163 kB/s | 3.8 kB     00:00    
fedora                                           96 kB/s |  12 kB     00:00    
Package make-1:4.3-2.fc33.x86_64 is already installed.
Dependencies resolved.
===================================================================================================================================================
 Package                                 Arch    Version                       Repository                                                      Size
===================================================================================================================================================
Installing:
 autoconf                                noarch  2.69-35.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  666 k
 autoconf-archive                        noarch  2019.01.06-6.fc33             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  589 k
 automake                                noarch  1.16.2-3.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  664 k
 doxygen                                 x86_64  1:1.9.1-1.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  4.8 M
 environment-modules                     x86_64  4.6.1-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  407 k
 fftw-devel                              x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  130 k
 flexiblas-devel                         x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  100 k
 gcc-c++                                 x86_64  11.0.0-0.13.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   12 M
 gettext-devel                           x86_64  0.21-3.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  201 k
 hdf5-devel                              x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 hdf5-mpich-devel                        x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 hdf5-openmpi-devel                      x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 m4                                      x86_64  1.4.18-16.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  211 k
 mpark-variant-devel                     x86_64  1.4.0-4.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 mpich-devel                             x86_64  3.3.2-8.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  901 k
 netcdf-cxx4-devel                       x86_64  4.3.1-3.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   57 k
 netcdf-devel                            x86_64  4.7.3-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  112 k
 openmpi-devel                           x86_64  4.0.5-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.2 M
 petsc-mpich-devel                       x86_64  3.14.2-3.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.2 M
 petsc-openmpi-devel                     x86_64  3.14.2-3.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  6.3 M
 python3                                 x86_64  3.9.1-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   28 k
 python3-Cython                          x86_64  0.29.21-4.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.1 M
 python3-devel                           x86_64  3.9.1-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  206 k
 python3-jinja2                          noarch  2.11.2-7.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  492 k
 python3-netcdf4                         x86_64  1.5.4-1.fc34                  copr_base                                                      512 k
 python3-numpy                           x86_64  1:1.20.0-1.rc2.fc34           copr_base                                                      4.8 M
 python3-scipy                           x86_64  1.6.0-1.fc34                  copr_base                                                       16 M
 python3-sphinx                          noarch  1:3.3.1-2.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 sundials-devel                          x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 sundials-mpich-devel                    x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 sundials-openmpi-devel                  x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 zlib-devel                              x86_64  1.2.11-23.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   44 k
Installing dependencies:
 MUMPS-common                            noarch  5.3.5-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  801 k
 MUMPS-mpich                             x86_64  5.3.5-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.7 M
 MUMPS-openmpi                           x86_64  5.3.5-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.8 M
 acl                                     x86_64  2.2.53-9.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   72 k
 adobe-mappings-cmap                     noarch  20171205-9.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.9 M
 adobe-mappings-cmap-deprecated          noarch  20171205-9.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  109 k
 adobe-mappings-pdf                      noarch  20180407-7.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  668 k
 annobin                                 x86_64  9.57-1.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  135 k
 atk                                     x86_64  2.36.0-2.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  273 k
 avahi-libs                              x86_64  0.8-6.fc34                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   67 k
 cairo                                   x86_64  1.17.4-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  670 k
 cairo-gobject                           x86_64  1.17.4-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   18 k
 cgnslib                                 x86_64  4.1.2-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  816 k
 clang-libs                              x86_64  11.0.1-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   22 M
 clang-resource-filesystem               x86_64  11.0.1-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   12 k
 cmake-filesystem                        x86_64  3.19.3-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   16 k
 cpp                                     x86_64  11.0.0-0.13.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   10 M
 cryptsetup-libs                         x86_64  2.3.4-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  476 k
 cups-libs                               x86_64  1:2.3.3op1-1.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  274 k
 dbus                                    x86_64  1:1.12.20-2.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  9.9 k
 dbus-broker                             x86_64  24-2.fc34                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  171 k
 dbus-common                             noarch  1:1.12.20-2.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   17 k
 dbus-libs                               x86_64  1:1.12.20-2.fc33              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  154 k
 dejavu-sans-fonts                       noarch  2.37-15.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.3 M
 device-mapper                           x86_64  1.02.173-1.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  142 k
 device-mapper-libs                      x86_64  1.02.173-1.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  178 k
 emacs-filesystem                        noarch  1:27.1-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.2 k
 fftw                                    x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   45 k
 fftw-libs                               x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  7.3 k
 fftw-libs-double                        x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  940 k
 fftw-libs-long                          x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  509 k
 fftw-libs-quad                          x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  881 k
 fftw-libs-single                        x86_64  3.3.8-9.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  974 k
 flexiblas                               x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 k
 flexiblas-netlib                        x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.0 M
 flexiblas-netlib64                      x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.9 M
 flexiblas-openblas-openmp               x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   17 k
 flexiblas-openblas-openmp64             x86_64  3.0.4-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   17 k
 fontconfig                              x86_64  2.13.93-4.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  275 k
 fonts-filesystem                        noarch  1:2.0.5-4.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  8.7 k
 freetype                                x86_64  2.10.4-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  391 k
 fribidi                                 x86_64  1.0.10-3.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   86 k
 gcc                                     x86_64  11.0.0-0.13.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 M
 gcc-gfortran                            x86_64  11.0.0-0.13.fc34              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 M
 gd                                      x86_64  2.3.0-3.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  137 k
 gdbm-libs                               x86_64  1:1.19-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   54 k
 gdk-pixbuf2                             x86_64  2.40.0-3.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  463 k
 gdk-pixbuf2-modules                     x86_64  2.40.0-3.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   98 k
 gettext                                 x86_64  0.21-3.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 gettext-common-devel                    noarch  0.21-3.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  407 k
 gettext-libs                            x86_64  0.21-3.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  308 k
 glib2                                   x86_64  2.67.1-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.7 M
 glibc-devel                             x86_64  2.32.9000-26.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 glibc-headers-x86                       noarch  2.32.9000-26.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  514 k
 gnutls                                  x86_64  3.6.15-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  925 k
 google-droid-sans-fonts                 noarch  20200215-8.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.7 M
 graphite2                               x86_64  1.3.14-6.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   95 k
 graphviz                                x86_64  2.44.0-16.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.4 M
 groff-base                              x86_64  1.22.4-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 gtk-update-icon-cache                   x86_64  3.24.24-1.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   33 k
 gtk2                                    x86_64  2.24.33-2.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  3.5 M
 gts                                     x86_64  0.7.6-38.20121130.fc33        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  237 k
 harfbuzz                                x86_64  2.7.4-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  635 k
 hdf-libs                                x86_64  4.2.15-3.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  298 k
 hdf5                                    x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 hdf5-mpich                              x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 hdf5-openmpi                            x86_64  1.10.6-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 hicolor-icon-theme                      noarch  0.17-9.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   44 k
 hwdata                                  noarch  0.343-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.5 M
 hwloc-libs                              x86_64  2.2.0-1.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  2.0 M
 hypre-mpich                             x86_64  2.18.2-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.5 M
 hypre-openmpi                           x86_64  2.18.2-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.5 M
 infinipath-psm                          x86_64  3.3-26_g604758e_open.6.fc34.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  200 k
 iptables-libs                           x86_64  1.8.7-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  368 k
 isl                                     x86_64  0.16.1-12.fc33                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  876 k
 jasper-libs                             x86_64  2.0.22-1.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  152 k
 jbig2dec-libs                           x86_64  0.19-3.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   74 k
 jbigkit-libs                            x86_64  2.1-20.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   52 k
 json-c                                  x86_64  0.14-7.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   41 k
 kbd                                     x86_64  2.4.0-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  388 k
 kbd-misc                                noarch  2.4.0-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.5 M
 kernel-headers                          x86_64  5.11.0-0.rc2.git0.1.fc34      http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.2 M
 kmod                                    x86_64  28-1.fc34                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  123 k
 kmod-libs                               x86_64  28-1.fc34                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   64 k
 langpacks-core-font-en                  noarch  3.0-6.fc34                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  9.7 k
 lasi                                    x86_64  1.1.3-4.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   56 k
 lcms2                                   x86_64  2.11-2.fc33                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  169 k
 less                                    x86_64  551-4.fc33                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  154 k
 libICE                                  x86_64  1.0.10-5.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   71 k
 libSM                                   x86_64  1.2.3-7.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   42 k
 libX11                                  x86_64  1.7.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  660 k
 libX11-common                           noarch  1.7.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  153 k
 libX11-xcb                              x86_64  1.7.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 libXau                                  x86_64  1.0.9-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 k
 libXaw                                  x86_64  1.0.13-16.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  202 k
 libXcomposite                           x86_64  0.4.5-4.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   23 k
 libXcursor                              x86_64  1.2.0-4.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   29 k
 libXdamage                              x86_64  1.1.5-4.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   22 k
 libXext                                 x86_64  1.3.4-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   39 k
 libXfixes                               x86_64  5.0.3-13.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   19 k
 libXft                                  x86_64  2.3.3-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   63 k
 libXi                                   x86_64  1.7.10-5.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   38 k
 libXinerama                             x86_64  1.1.4-7.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   14 k
 libXmu                                  x86_64  1.1.3-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   76 k
 libXpm                                  x86_64  3.5.13-4.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   59 k
 libXrandr                               x86_64  1.5.2-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 libXrender                              x86_64  0.9.10-13.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 libXt                                   x86_64  1.2.0-3.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  183 k
 libXxf86vm                              x86_64  1.1.4-15.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   18 k
 libaec                                  x86_64  1.0.4-6.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   38 k
 libaec-devel                            x86_64  1.0.4-6.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 libargon2                               x86_64  20171227-5.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   29 k
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 python3-sphinxcontrib-devhelp           noarch  1.0.2-2.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   29 k
 python3-sphinxcontrib-htmlhelp          noarch  1.0.3-2.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   37 k
 python3-sphinxcontrib-jsmath            noarch  1.0.1-9.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   16 k
 python3-sphinxcontrib-qthelp            noarch  1.0.3-2.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   33 k
 python3-sphinxcontrib-serializinghtml   noarch  1.1.4-2.fc33                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   32 k
 python3-urllib3                         noarch  1.25.10-3.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  175 k
 rdma-core                               x86_64  32.0-1.fc34                   copr_base                                                       57 k
 rpm-mpi-hooks                           noarch  6-6.fc33                      http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   11 k
 scalapack-common                        x86_64  2.1.0-7.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   18 k
 scalapack-mpich                         x86_64  2.1.0-7.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.7 M
 scalapack-openmpi                       x86_64  2.1.0-7.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.7 M
 scotch                                  x86_64  6.1.0-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  379 k
 shared-mime-info                        x86_64  2.1-1.fc34                    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  375 k
 suitesparse                             x86_64  5.4.0-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 suitesparse64                           x86_64  5.4.0-5.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 sundials                                x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 sundials-mpich                          x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 sundials-openmpi                        x86_64  5.5.0-2.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 superlu_dist-mpich                      x86_64  1:6.1.1-6.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  371 k
 superlu_dist-openmpi                    x86_64  1:6.1.1-6.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  386 k
 systemd                                 x86_64  247.2-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  4.2 M
 systemd-pam                             x86_64  247.2-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  313 k
 systemd-rpm-macros                      noarch  247.2-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   27 k
 systemd-udev                            x86_64  247.2-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.5 M
 tbb                                     x86_64  2020.3-2.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  174 k
 tcl                                     x86_64  1:8.6.10-5.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.1 M
 tcsh                                    x86_64  6.22.03-1.fc34                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  464 k
 tk                                      x86_64  1:8.6.10-5.fc33               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.6 M
 ucx                                     x86_64  1.9.0-1.fc34                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  494 k
 urw-base35-bookman-fonts                noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  856 k
 urw-base35-c059-fonts                   noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  884 k
 urw-base35-d050000l-fonts               noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   77 k
 urw-base35-fonts                        noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  9.6 k
 urw-base35-fonts-common                 noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   20 k
 urw-base35-gothic-fonts                 noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  652 k
 urw-base35-nimbus-mono-ps-fonts         noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  802 k
 urw-base35-nimbus-roman-fonts           noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  865 k
 urw-base35-nimbus-sans-fonts            noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.3 M
 urw-base35-p052-fonts                   noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  983 k
 urw-base35-standard-symbols-ps-fonts    noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   42 k
 urw-base35-z003-fonts                   noarch  20200910-1.fc34               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  279 k
 vim-filesystem                          noarch  2:8.2.2311-1.fc34             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   23 k
 xapian-core-libs                        x86_64  1.4.17-2.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  746 k
 xml-common                              noarch  0.6.3-55.fc33                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   31 k
 xorg-x11-font-utils                     x86_64  1:7.5-47.fc34                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  101 k
 xorg-x11-fonts-ISO8859-1-100dpi         noarch  7.5-26.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  1.0 M
 xorg-x11-server-utils                   x86_64  7.7-37.fc34                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  190 k

Transaction Summary
===================================================================================================================================================
Install  347 Packages

Total download size: 325 M
Installed size: 1.2 G
Downloading Packages:
(1/347): libibumad-32.0-1.fc34.x86_64.rpm       177 kB/s |  27 kB     00:00    
(2/347): libibverbs-32.0-1.fc34.x86_64.rpm      1.8 MB/s | 284 kB     00:00    
(3/347): libibverbs-core-32.0-1.fc34.x86_64.rpm 412 kB/s |  73 kB     00:00    
(4/347): librdmacm-32.0-1.fc34.x86_64.rpm       1.9 MB/s |  73 kB     00:00    
(5/347): python3-cftime-1.3.0-1.fc34.x86_64.rpm 4.7 MB/s | 255 kB     00:00    
(6/347): python3-numpy-f2py-1.20.0-1.rc2.fc34.x 3.5 MB/s | 217 kB     00:00    
(7/347): python3-netcdf4-1.5.4-1.fc34.x86_64.rp 3.8 MB/s | 512 kB     00:00    
(8/347): python3-numpy-1.20.0-1.rc2.fc34.x86_64  22 MB/s | 4.8 MB     00:00    
(9/347): MUMPS-common-5.3.5-1.fc34.noarch.rpm    18 MB/s | 801 kB     00:00    
(10/347): rdma-core-32.0-1.fc34.x86_64.rpm      273 kB/s |  57 kB     00:00    
(11/347): MUMPS-mpich-5.3.5-1.fc34.x86_64.rpm    10 MB/s | 1.7 MB     00:00    
(12/347): acl-2.2.53-9.fc34.x86_64.rpm          8.8 MB/s |  72 kB     00:00    
(13/347): MUMPS-openmpi-5.3.5-1.fc34.x86_64.rpm  10 MB/s | 1.8 MB     00:00    
(14/347): adobe-mappings-cmap-20171205-9.fc33.n  26 MB/s | 1.9 MB     00:00    
(15/347): adobe-mappings-cmap-deprecated-201712 3.4 MB/s | 109 kB     00:00    
(16/347): annobin-9.57-1.fc34.x86_64.rpm         13 MB/s | 135 kB     00:00    
(17/347): adobe-mappings-pdf-20180407-7.fc33.no  23 MB/s | 668 kB     00:00    
(18/347): atk-2.36.0-2.fc33.x86_64.rpm           16 MB/s | 273 kB     00:00    
(19/347): autoconf-2.69-35.fc34.noarch.rpm       22 MB/s | 666 kB     00:00    
(20/347): autoconf-archive-2019.01.06-6.fc33.no  21 MB/s | 589 kB     00:00    
(21/347): avahi-libs-0.8-6.fc34.x86_64.rpm      7.1 MB/s |  67 kB     00:00    
(22/347): automake-1.16.2-3.fc34.noarch.rpm      22 MB/s | 664 kB     00:00    
(23/347): cairo-gobject-1.17.4-1.fc34.x86_64.rp 2.6 MB/s |  18 kB     00:00    
(24/347): cairo-1.17.4-1.fc34.x86_64.rpm         23 MB/s | 670 kB     00:00    
(25/347): cgnslib-4.1.2-1.fc34.x86_64.rpm        18 MB/s | 816 kB     00:00    
(26/347): clang-resource-filesystem-11.0.1-4.fc 2.0 MB/s |  12 kB     00:00    
(27/347): cmake-filesystem-3.19.3-1.fc34.x86_64 2.4 MB/s |  16 kB     00:00    
(28/347): python3-scipy-1.6.0-1.fc34.x86_64.rpm  18 MB/s |  16 MB     00:00    
(29/347): cryptsetup-libs-2.3.4-1.fc34.x86_64.r  11 MB/s | 476 kB     00:00    
(30/347): cups-libs-2.3.3op1-1.fc34.x86_64.rpm   16 MB/s | 274 kB     00:00    
(31/347): dbus-1.12.20-2.fc33.x86_64.rpm        1.2 MB/s | 9.9 kB     00:00    
(32/347): dbus-broker-24-2.fc34.x86_64.rpm      8.9 MB/s | 171 kB     00:00    
(33/347): dbus-common-1.12.20-2.fc33.noarch.rpm 2.3 MB/s |  17 kB     00:00    
(34/347): dbus-libs-1.12.20-2.fc33.x86_64.rpm   9.4 MB/s | 154 kB     00:00    
(35/347): cpp-11.0.0-0.13.fc34.x86_64.rpm        21 MB/s |  10 MB     00:00    
(36/347): dejavu-sans-fonts-2.37-15.fc34.noarch  13 MB/s | 1.3 MB     00:00    
(37/347): device-mapper-1.02.173-1.fc33.x86_64. 8.0 MB/s | 142 kB     00:00    
(38/347): device-mapper-libs-1.02.173-1.fc33.x8 9.3 MB/s | 178 kB     00:00    
(39/347): emacs-filesystem-27.1-2.fc34.noarch.r 1.1 MB/s | 8.2 kB     00:00    
(40/347): environment-modules-4.6.1-1.fc34.x86_  14 MB/s | 407 kB     00:00    
(41/347): fftw-3.3.8-9.fc34.x86_64.rpm          4.4 MB/s |  45 kB     00:00    
(42/347): fftw-devel-3.3.8-9.fc34.x86_64.rpm    8.0 MB/s | 130 kB     00:00    
(43/347): fftw-libs-3.3.8-9.fc34.x86_64.rpm     1.4 MB/s | 7.3 kB     00:00    
(44/347): fftw-libs-double-3.3.8-9.fc34.x86_64.  21 MB/s | 940 kB     00:00    
(45/347): fftw-libs-long-3.3.8-9.fc34.x86_64.rp  16 MB/s | 509 kB     00:00    
(46/347): doxygen-1.9.1-1.fc34.x86_64.rpm        22 MB/s | 4.8 MB     00:00    
(47/347): fftw-libs-quad-3.3.8-9.fc34.x86_64.rp  15 MB/s | 881 kB     00:00    
(48/347): flexiblas-3.0.4-2.fc34.x86_64.rpm     3.4 MB/s |  31 kB     00:00    
(49/347): flexiblas-devel-3.0.4-2.fc34.x86_64.r 8.6 MB/s | 100 kB     00:00    
(50/347): fftw-libs-single-3.3.8-9.fc34.x86_64.  15 MB/s | 974 kB     00:00    
(51/347): flexiblas-netlib-3.0.4-2.fc34.x86_64.  25 MB/s | 3.0 MB     00:00    
(52/347): flexiblas-openblas-openmp-3.0.4-2.fc3 3.1 MB/s |  17 kB     00:00    
(53/347): clang-libs-11.0.1-4.fc34.x86_64.rpm    22 MB/s |  22 MB     00:01    
(54/347): flexiblas-openblas-openmp64-3.0.4-2.f 204 kB/s |  17 kB     00:00    
(55/347): flexiblas-netlib64-3.0.4-2.fc34.x86_6  15 MB/s | 2.9 MB     00:00    
(56/347): fonts-filesystem-2.0.5-4.fc33.noarch. 558 kB/s | 8.7 kB     00:00    
(57/347): fontconfig-2.13.93-4.fc34.x86_64.rpm   10 MB/s | 275 kB     00:00    
(58/347): fribidi-1.0.10-3.fc33.x86_64.rpm      8.7 MB/s |  86 kB     00:00    
(59/347): freetype-2.10.4-1.fc34.x86_64.rpm      13 MB/s | 391 kB     00:00    
(60/347): gcc-gfortran-11.0.0-0.13.fc34.x86_64.  22 MB/s |  11 MB     00:00    
(61/347): gcc-c++-11.0.0-0.13.fc34.x86_64.rpm    20 MB/s |  12 MB     00:00    
(62/347): gd-2.3.0-3.fc33.x86_64.rpm            2.0 MB/s | 137 kB     00:00    
(63/347): gdbm-libs-1.19-1.fc34.x86_64.rpm      7.5 MB/s |  54 kB     00:00    
(64/347): gdk-pixbuf2-modules-2.40.0-3.fc33.x86 8.5 MB/s |  98 kB     00:00    
(65/347): gdk-pixbuf2-2.40.0-3.fc33.x86_64.rpm   18 MB/s | 463 kB     00:00    
(66/347): gettext-common-devel-0.21-3.fc34.noar  15 MB/s | 407 kB     00:00    
(67/347): gettext-devel-0.21-3.fc34.x86_64.rpm   12 MB/s | 201 kB     00:00    
(68/347): gettext-0.21-3.fc34.x86_64.rpm         17 MB/s | 1.1 MB     00:00    
(69/347): gettext-libs-0.21-3.fc34.x86_64.rpm    14 MB/s | 308 kB     00:00    
(70/347): glibc-devel-2.32.9000-26.fc34.x86_64.  18 MB/s | 1.1 MB     00:00    
(71/347): glibc-headers-x86-2.32.9000-26.fc34.n  17 MB/s | 514 kB     00:00    
(72/347): glib2-2.67.1-2.fc34.x86_64.rpm         20 MB/s | 2.7 MB     00:00    
(73/347): gnutls-3.6.15-2.fc34.x86_64.rpm        16 MB/s | 925 kB     00:00    
(74/347): graphite2-1.3.14-6.fc34.x86_64.rpm    7.9 MB/s |  95 kB     00:00    
(75/347): google-droid-sans-fonts-20200215-8.fc  19 MB/s | 2.7 MB     00:00    
(76/347): groff-base-1.22.4-4.fc34.x86_64.rpm    20 MB/s | 1.1 MB     00:00    
(77/347): graphviz-2.44.0-16.fc34.x86_64.rpm     19 MB/s | 3.4 MB     00:00    
(78/347): gtk-update-icon-cache-3.24.24-1.fc34. 1.8 MB/s |  33 kB     00:00    
(79/347): gts-0.7.6-38.20121130.fc33.x86_64.rpm 9.1 MB/s | 237 kB     00:00    
(80/347): harfbuzz-2.7.4-1.fc34.x86_64.rpm       15 MB/s | 635 kB     00:00    
(81/347): hdf-libs-4.2.15-3.fc33.x86_64.rpm      13 MB/s | 298 kB     00:00    
(82/347): gtk2-2.24.33-2.fc34.x86_64.rpm         20 MB/s | 3.5 MB     00:00    
(83/347): hdf5-1.10.6-4.fc34.x86_64.rpm          17 MB/s | 2.0 MB     00:00    
(84/347): hdf5-devel-1.10.6-4.fc34.x86_64.rpm    17 MB/s | 1.1 MB     00:00    
(85/347): gcc-11.0.0-0.13.fc34.x86_64.rpm        21 MB/s |  31 MB     00:01    
(86/347): hdf5-mpich-1.10.6-4.fc34.x86_64.rpm   7.8 MB/s | 2.0 MB     00:00    
(87/347): hdf5-mpich-devel-1.10.6-4.fc34.x86_64 4.7 MB/s | 1.1 MB     00:00    
(88/347): hicolor-icon-theme-0.17-9.fc33.noarch 5.5 MB/s |  44 kB     00:00    
(89/347): hwdata-0.343-1.fc34.noarch.rpm         32 MB/s | 1.5 MB     00:00    
(90/347): hdf5-openmpi-devel-1.10.6-4.fc34.x86_ 9.2 MB/s | 1.1 MB     00:00    
(91/347): hwloc-libs-2.2.0-1.fc33.x86_64.rpm     26 MB/s | 2.0 MB     00:00    
(92/347): hdf5-openmpi-1.10.6-4.fc34.x86_64.rpm 9.0 MB/s | 2.0 MB     00:00    
(93/347): hypre-mpich-2.18.2-2.fc34.x86_64.rpm   15 MB/s | 1.5 MB     00:00    
(94/347): iptables-libs-1.8.7-1.fc34.x86_64.rpm  25 MB/s | 368 kB     00:00    
(95/347): isl-0.16.1-12.fc33.x86_64.rpm          29 MB/s | 876 kB     00:00    
(96/347): infinipath-psm-3.3-26_g604758e_open.6 3.2 MB/s | 200 kB     00:00    
(97/347): jasper-libs-2.0.22-1.fc34.x86_64.rpm   16 MB/s | 152 kB     00:00    
(98/347): jbig2dec-libs-0.19-3.fc34.x86_64.rpm  8.8 MB/s |  74 kB     00:00    
(99/347): jbigkit-libs-2.1-20.fc34.x86_64.rpm   5.4 MB/s |  52 kB     00:00    
(100/347): json-c-0.14-7.fc33.x86_64.rpm        5.0 MB/s |  41 kB     00:00    
(101/347): kbd-2.4.0-1.fc34.x86_64.rpm           16 MB/s | 388 kB     00:00    
(102/347): hypre-openmpi-2.18.2-2.fc34.x86_64.r 8.4 MB/s | 1.5 MB     00:00    
(103/347): kmod-28-1.fc34.x86_64.rpm            8.2 MB/s | 123 kB     00:00    
(104/347): kbd-misc-2.4.0-1.fc34.noarch.rpm      22 MB/s | 1.5 MB     00:00    
(105/347): kmod-libs-28-1.fc34.x86_64.rpm       4.8 MB/s |  64 kB     00:00    
(106/347): langpacks-core-font-en-3.0-6.fc34.no 1.5 MB/s | 9.7 kB     00:00    
(107/347): kernel-headers-5.11.0-0.rc2.git0.1.f  21 MB/s | 1.2 MB     00:00    
(108/347): lasi-1.1.3-4.fc33.x86_64.rpm         4.5 MB/s |  56 kB     00:00    
(109/347): libICE-1.0.10-5.fc34.x86_64.rpm      7.9 MB/s |  71 kB     00:00    
(110/347): lcms2-2.11-2.fc33.x86_64.rpm         8.5 MB/s | 169 kB     00:00    
(111/347): less-551-4.fc33.x86_64.rpm            11 MB/s | 154 kB     00:00    
(112/347): libSM-1.2.3-7.fc34.x86_64.rpm        5.5 MB/s |  42 kB     00:00    
(113/347): libX11-xcb-1.7.0-2.fc34.x86_64.rpm   2.0 MB/s |  11 kB     00:00    
(114/347): libX11-common-1.7.0-2.fc34.noarch.rp  11 MB/s | 153 kB     00:00    
(115/347): libXau-1.0.9-5.fc34.x86_64.rpm       4.4 MB/s |  31 kB     00:00    
(116/347): libX11-1.7.0-2.fc34.x86_64.rpm        22 MB/s | 660 kB     00:00    
(117/347): libXcomposite-0.4.5-4.fc34.x86_64.rp 2.4 MB/s |  23 kB     00:00    
(118/347): libXaw-1.0.13-16.fc34.x86_64.rpm      12 MB/s | 202 kB     00:00    
(119/347): libXcursor-1.2.0-4.fc34.x86_64.rpm   3.3 MB/s |  29 kB     00:00    
(120/347): libXdamage-1.1.5-4.fc34.x86_64.rpm   2.2 MB/s |  22 kB     00:00    
(121/347): libXext-1.3.4-5.fc34.x86_64.rpm      4.3 MB/s |  39 kB     00:00    
(122/347): libXfixes-5.0.3-13.fc34.x86_64.rpm   2.4 MB/s |  19 kB     00:00    
(123/347): libXi-1.7.10-5.fc34.x86_64.rpm       5.0 MB/s |  38 kB     00:00    
(124/347): libXft-2.3.3-5.fc34.x86_64.rpm       6.0 MB/s |  63 kB     00:00    
(125/347): libXinerama-1.1.4-7.fc34.x86_64.rpm  2.0 MB/s |  14 kB     00:00    
(126/347): libXmu-1.1.3-5.fc34.x86_64.rpm       8.2 MB/s |  76 kB     00:00    
(127/347): libXpm-3.5.13-4.fc34.x86_64.rpm      5.7 MB/s |  59 kB     00:00    
(128/347): libXrandr-1.5.2-5.fc34.x86_64.rpm    3.1 MB/s |  27 kB     00:00    
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  Verifying        : xapian-core-libs-1.4.17-2.fc34.x86_64              342/347 
  Verifying        : xml-common-0.6.3-55.fc33.noarch                    343/347 
  Verifying        : xorg-x11-font-utils-1:7.5-47.fc34.x86_64           344/347 
  Verifying        : xorg-x11-fonts-ISO8859-1-100dpi-7.5-26.fc34.noar   345/347 
  Verifying        : xorg-x11-server-utils-7.7-37.fc34.x86_64           346/347 
  Verifying        : zlib-devel-1.2.11-23.fc34.x86_64                   347/347 

Installed:
  MUMPS-common-5.3.5-1.fc34.noarch                                              
  MUMPS-mpich-5.3.5-1.fc34.x86_64                                               
  MUMPS-openmpi-5.3.5-1.fc34.x86_64                                             
  acl-2.2.53-9.fc34.x86_64                                                      
  adobe-mappings-cmap-20171205-9.fc33.noarch                                    
  adobe-mappings-cmap-deprecated-20171205-9.fc33.noarch                         
  adobe-mappings-pdf-20180407-7.fc33.noarch                                     
  annobin-9.57-1.fc34.x86_64                                                    
  atk-2.36.0-2.fc33.x86_64                                                      
  autoconf-2.69-35.fc34.noarch                                                  
  autoconf-archive-2019.01.06-6.fc33.noarch                                     
  automake-1.16.2-3.fc34.noarch                                                 
  avahi-libs-0.8-6.fc34.x86_64                                                  
  cairo-1.17.4-1.fc34.x86_64                                                    
  cairo-gobject-1.17.4-1.fc34.x86_64                                            
  cgnslib-4.1.2-1.fc34.x86_64                                                   
  clang-libs-11.0.1-4.fc34.x86_64                                               
  clang-resource-filesystem-11.0.1-4.fc34.x86_64                                
  cmake-filesystem-3.19.3-1.fc34.x86_64                                         
  cpp-11.0.0-0.13.fc34.x86_64                                                   
  cryptsetup-libs-2.3.4-1.fc34.x86_64                                           
  cups-libs-1:2.3.3op1-1.fc34.x86_64                                            
  dbus-1:1.12.20-2.fc33.x86_64                                                  
  dbus-broker-24-2.fc34.x86_64                                                  
  dbus-common-1:1.12.20-2.fc33.noarch                                           
  dbus-libs-1:1.12.20-2.fc33.x86_64                                             
  dejavu-sans-fonts-2.37-15.fc34.noarch                                         
  device-mapper-1.02.173-1.fc33.x86_64                                          
  device-mapper-libs-1.02.173-1.fc33.x86_64                                     
  doxygen-1:1.9.1-1.fc34.x86_64                                                 
  emacs-filesystem-1:27.1-2.fc34.noarch                                         
  environment-modules-4.6.1-1.fc34.x86_64                                       
  fftw-3.3.8-9.fc34.x86_64                                                      
  fftw-devel-3.3.8-9.fc34.x86_64                                                
  fftw-libs-3.3.8-9.fc34.x86_64                                                 
  fftw-libs-double-3.3.8-9.fc34.x86_64                                          
  fftw-libs-long-3.3.8-9.fc34.x86_64                                            
  fftw-libs-quad-3.3.8-9.fc34.x86_64                                            
  fftw-libs-single-3.3.8-9.fc34.x86_64                                          
  flexiblas-3.0.4-2.fc34.x86_64                                                 
  flexiblas-devel-3.0.4-2.fc34.x86_64                                           
  flexiblas-netlib-3.0.4-2.fc34.x86_64                                          
  flexiblas-netlib64-3.0.4-2.fc34.x86_64                                        
  flexiblas-openblas-openmp-3.0.4-2.fc34.x86_64                                 
  flexiblas-openblas-openmp64-3.0.4-2.fc34.x86_64                               
  fontconfig-2.13.93-4.fc34.x86_64                                              
  fonts-filesystem-1:2.0.5-4.fc33.noarch                                        
  freetype-2.10.4-1.fc34.x86_64                                                 
  fribidi-1.0.10-3.fc33.x86_64                                                  
  gcc-11.0.0-0.13.fc34.x86_64                                                   
  gcc-c++-11.0.0-0.13.fc34.x86_64                                               
  gcc-gfortran-11.0.0-0.13.fc34.x86_64                                          
  gd-2.3.0-3.fc33.x86_64                                                        
  gdbm-libs-1:1.19-1.fc34.x86_64                                                
  gdk-pixbuf2-2.40.0-3.fc33.x86_64                                              
  gdk-pixbuf2-modules-2.40.0-3.fc33.x86_64                                      
  gettext-0.21-3.fc34.x86_64                                                    
  gettext-common-devel-0.21-3.fc34.noarch                                       
  gettext-devel-0.21-3.fc34.x86_64                                              
  gettext-libs-0.21-3.fc34.x86_64                                               
  glib2-2.67.1-2.fc34.x86_64                                                    
  glibc-devel-2.32.9000-26.fc34.x86_64                                          
  glibc-headers-x86-2.32.9000-26.fc34.noarch                                    
  gnutls-3.6.15-2.fc34.x86_64                                                   
  google-droid-sans-fonts-20200215-8.fc34.noarch                                
  graphite2-1.3.14-6.fc34.x86_64                                                
  graphviz-2.44.0-16.fc34.x86_64                                                
  groff-base-1.22.4-4.fc34.x86_64                                               
  gtk-update-icon-cache-3.24.24-1.fc34.x86_64                                   
  gtk2-2.24.33-2.fc34.x86_64                                                    
  gts-0.7.6-38.20121130.fc33.x86_64                                             
  harfbuzz-2.7.4-1.fc34.x86_64                                                  
  hdf-libs-4.2.15-3.fc33.x86_64                                                 
  hdf5-1.10.6-4.fc34.x86_64                                                     
  hdf5-devel-1.10.6-4.fc34.x86_64                                               
  hdf5-mpich-1.10.6-4.fc34.x86_64                                               
  hdf5-mpich-devel-1.10.6-4.fc34.x86_64                                         
  hdf5-openmpi-1.10.6-4.fc34.x86_64                                             
  hdf5-openmpi-devel-1.10.6-4.fc34.x86_64                                       
  hicolor-icon-theme-0.17-9.fc33.noarch                                         
  hwdata-0.343-1.fc34.noarch                                                    
  hwloc-libs-2.2.0-1.fc33.x86_64                                                
  hypre-mpich-2.18.2-2.fc34.x86_64                                              
  hypre-openmpi-2.18.2-2.fc34.x86_64                                            
  infinipath-psm-3.3-26_g604758e_open.6.fc34.2.x86_64                           
  iptables-libs-1.8.7-1.fc34.x86_64                                             
  isl-0.16.1-12.fc33.x86_64                                                     
  jasper-libs-2.0.22-1.fc34.x86_64                                              
  jbig2dec-libs-0.19-3.fc34.x86_64                                              
  jbigkit-libs-2.1-20.fc34.x86_64                                               
  json-c-0.14-7.fc33.x86_64                                                     
  kbd-2.4.0-1.fc34.x86_64                                                       
  kbd-misc-2.4.0-1.fc34.noarch                                                  
  kernel-headers-5.11.0-0.rc2.git0.1.fc34.x86_64                                
  kmod-28-1.fc34.x86_64                                                         
  kmod-libs-28-1.fc34.x86_64                                                    
  langpacks-core-font-en-3.0-6.fc34.noarch                                      
  lasi-1.1.3-4.fc33.x86_64                                                      
  lcms2-2.11-2.fc33.x86_64                                                      
  less-551-4.fc33.x86_64                                                        
  libICE-1.0.10-5.fc34.x86_64                                                   
  libSM-1.2.3-7.fc34.x86_64                                                     
  libX11-1.7.0-2.fc34.x86_64                                                    
  libX11-common-1.7.0-2.fc34.noarch                                             
  libX11-xcb-1.7.0-2.fc34.x86_64                                                
  libXau-1.0.9-5.fc34.x86_64                                                    
  libXaw-1.0.13-16.fc34.x86_64                                                  
  libXcomposite-0.4.5-4.fc34.x86_64                                             
  libXcursor-1.2.0-4.fc34.x86_64                                                
  libXdamage-1.1.5-4.fc34.x86_64                                                
  libXext-1.3.4-5.fc34.x86_64                                                   
  libXfixes-5.0.3-13.fc34.x86_64                                                
  libXft-2.3.3-5.fc34.x86_64                                                    
  libXi-1.7.10-5.fc34.x86_64                                                    
  libXinerama-1.1.4-7.fc34.x86_64                                               
  libXmu-1.1.3-5.fc34.x86_64                                                    
  libXpm-3.5.13-4.fc34.x86_64                                                   
  libXrandr-1.5.2-5.fc34.x86_64                                                 
  libXrender-0.9.10-13.fc34.x86_64                                              
  libXt-1.2.0-3.fc34.x86_64                                                     
  libXxf86vm-1.1.4-15.fc34.x86_64                                               
  libaec-1.0.4-6.fc34.x86_64                                                    
  libaec-devel-1.0.4-6.fc34.x86_64                                              
  libargon2-20171227-5.fc33.x86_64                                              
  libcbor-0.7.0-2.fc34.x86_64                                                   
  libcurl-devel-7.74.0-2.fc34.x86_64                                            
  libdatrie-0.2.9-13.fc34.x86_64                                                
  libdrm-2.4.103-1.fc34.x86_64                                                  
  libedit-3.1-33.20191231cvs.fc33.x86_64                                        
  libevent-2.1.12-2.fc34.x86_64                                                 
  libfabric-1.11.2-1.fc34.x86_64                                                
  libfido2-1.6.0-1.fc34.x86_64                                                  
  libfontenc-1.1.3-14.fc34.x86_64                                               
  libgfortran-11.0.0-0.13.fc34.x86_64                                           
  libglvnd-1:1.3.2-2.fc33.x86_64                                                
  libglvnd-glx-1:1.3.2-2.fc33.x86_64                                            
  libgs-9.53.3-4.fc34.x86_64                                                    
  libibumad-32.0-1.fc34.x86_64                                                  
  libibverbs-32.0-1.fc34.x86_64                                                 
  libibverbs-core-32.0-1.fc34.x86_64                                            
  libijs-0.35-12.fc33.x86_64                                                    
  libimagequant-2.13.1-1.fc34.x86_64                                            
  libjpeg-turbo-2.0.5-5.fc33.x86_64                                             
  libmcpp-2.7.2-26.fc33.x86_64                                                  
  libmnl-1.0.4-12.fc33.x86_64                                                   
  libmpc-1.2.1-1.fc34.x86_64                                                    
  libnetfilter_conntrack-1.0.7-5.fc33.x86_64                                    
  libnfnetlink-1.0.1-18.fc33.x86_64                                             
  libnl3-3.5.0-5.fc33.x86_64                                                    
  libpaper-1.1.28-1.fc34.x86_64                                                 
  libpcap-14:1.9.1-6.fc34.x86_64                                                
  libpciaccess-0.16-3.fc33.x86_64                                               
  libpipeline-1.5.3-1.fc34.x86_64                                               
  libpng-2:1.6.37-6.fc34.x86_64                                                 
  libpsm2-11.2.86-7.fc34.x86_64                                                 
  libquadmath-11.0.0-0.13.fc34.x86_64                                           
  libquadmath-devel-11.0.0-0.13.fc34.x86_64                                     
  libraqm-0.7.0-6.fc33.x86_64                                                   
  librdmacm-32.0-1.fc34.x86_64                                                  
  librsvg2-2.50.2-1.fc34.x86_64                                                 
  libseccomp-2.5.0-3.fc33.x86_64                                                
  libstdc++-devel-11.0.0-0.13.fc34.x86_64                                       
  libtextstyle-0.21-3.fc34.x86_64                                               
  libthai-0.1.28-5.fc33.x86_64                                                  
  libtiff-4.1.0-6.fc34.x86_64                                                   
  libwebp-1.1.0-5.fc33.x86_64                                                   
  libxcb-1.13.1-6.fc34.x86_64                                                   
  libxcrypt-devel-4.4.17-1.fc34.x86_64                                          
  libxshmfence-1.3-7.fc33.x86_64                                                
  llvm-libs-11.0.1-4.fc34.x86_64                                                
  m4-1.4.18-16.fc34.x86_64                                                      
  man-db-2.9.3-2.fc34.x86_64                                                    
  mcpp-2.7.2-26.fc33.x86_64                                                     
  mesa-libGL-20.3.3-3.fc34.x86_64                                               
  mesa-libGLU-9.0.1-3.fc33.x86_64                                               
  mesa-libglapi-20.3.3-3.fc34.x86_64                                            
  metis-5.1.0-27.fc34.x86_64                                                    
  mpark-variant-devel-1.4.0-4.fc33.x86_64                                       
  mpich-3.3.2-8.fc34.x86_64                                                     
  mpich-devel-3.3.2-8.fc34.x86_64                                               
  munge-libs-0.5.13-10.fc34.x86_64                                              
  ncurses-6.2-3.20200222.fc33.x86_64                                            
  netcdf-4.7.3-5.fc34.x86_64                                                    
  netcdf-cxx4-4.3.1-3.fc33.x86_64                                               
  netcdf-cxx4-devel-4.3.1-3.fc33.x86_64                                         
  netcdf-devel-4.7.3-5.fc34.x86_64                                              
  netpbm-10.92.00-1.fc34.x86_64                                                 
  nettle-3.7-1.fc34.x86_64                                                      
  numactl-libs-2.0.14-2.fc34.x86_64                                             
  openblas-0.3.12-1.fc34.x86_64                                                 
  openblas-openmp-0.3.12-1.fc34.x86_64                                          
  openblas-openmp64-0.3.12-1.fc34.x86_64                                        
  openjpeg2-2.4.0-1.fc34.x86_64                                                 
  openmpi-4.0.5-2.fc34.x86_64                                                   
  openmpi-devel-4.0.5-2.fc34.x86_64                                             
  opensm-libs-3.3.23-5.fc34.x86_64                                              
  openssh-8.4p1-4.fc34.x86_64                                                   
  openssh-clients-8.4p1-4.fc34.x86_64                                           
  orangefs-2.9.8-1.fc34.x86_64                                                  
  pango-1.48.0-1.fc34.x86_64                                                    
  pciutils-3.7.0-1.fc34.x86_64                                                  
  pciutils-libs-3.7.0-1.fc34.x86_64                                             
  perl-B-1.80-468.fc34.x86_64                                                   
  perl-Carp-1.50-457.fc33.noarch                                                
  perl-Class-Struct-0.66-468.fc34.noarch                                        
  perl-Data-Dumper-2.174-459.fc34.x86_64                                        
  perl-DynaLoader-1.47-468.fc34.x86_64                                          
  perl-Encode-4:3.08-458.fc34.x86_64                                            
  perl-Errno-1.30-468.fc34.x86_64                                               
  perl-Exporter-5.74-458.fc33.noarch                                            
  perl-Fcntl-1.13-468.fc34.x86_64                                               
  perl-File-Basename-2.85-468.fc34.noarch                                       
  perl-File-Compare-1.100.600-468.fc34.noarch                                   
  perl-File-Copy-2.34-468.fc34.noarch                                           
  perl-File-Find-1.37-468.fc34.noarch                                           
  perl-File-Path-2.18-1.fc34.noarch                                             
  perl-File-Temp-1:0.231.100-1.fc34.noarch                                      
  perl-File-stat-1.09-468.fc34.noarch                                           
  perl-Getopt-Long-1:2.52-1.fc34.noarch                                         
  perl-Getopt-Std-1.12-468.fc34.noarch                                          
  perl-HTTP-Tiny-0.076-457.fc33.noarch                                          
  perl-IO-1.43-468.fc34.x86_64                                                  
  perl-IPC-Open3-1.21-468.fc34.noarch                                           
  perl-MIME-Base64-3.16-1.fc34.x86_64                                           
  perl-POSIX-1.94-468.fc34.x86_64                                               
  perl-PathTools-3.78-458.fc34.x86_64                                           
  perl-Pod-Escapes-1:1.07-457.fc33.noarch                                       
  perl-Pod-Perldoc-3.28.01-458.fc33.noarch                                      
  perl-Pod-Simple-1:3.42-1.fc34.noarch                                          
  perl-Pod-Usage-4:2.01-1.fc34.noarch                                           
  perl-Scalar-List-Utils-4:1.55-457.fc33.x86_64                                 
  perl-SelectSaver-1.02-468.fc34.noarch                                         
  perl-Socket-4:2.031-1.fc34.x86_64                                             
  perl-Storable-1:3.21-457.fc33.x86_64                                          
  perl-Symbol-1.08-468.fc34.noarch                                              
  perl-Term-ANSIColor-5.01-458.fc33.noarch                                      
  perl-Term-Cap-1.17-457.fc33.noarch                                            
  perl-Text-ParseWords-3.30-457.fc33.noarch                                     
  perl-Text-Tabs+Wrap-2013.0523-457.fc33.noarch                                 
  perl-Thread-Queue-3.14-457.fc33.noarch                                        
  perl-Time-Local-2:1.300-4.fc33.noarch                                         
  perl-constant-1.33-458.fc33.noarch                                            
  perl-if-0.60.800-468.fc34.noarch                                              
  perl-interpreter-4:5.32.0-468.fc34.x86_64                                     
  perl-libs-4:5.32.0-468.fc34.x86_64                                            
  perl-mro-1.23-468.fc34.x86_64                                                 
  perl-overload-1.31-468.fc34.noarch                                            
  perl-overloading-0.02-468.fc34.noarch                                         
  perl-parent-1:0.238-457.fc33.noarch                                           
  perl-podlators-1:4.14-457.fc33.noarch                                         
  perl-subs-1.03-468.fc34.noarch                                                
  perl-threads-1:2.25-457.fc33.x86_64                                           
  perl-threads-shared-1.61-457.fc33.x86_64                                      
  perl-vars-1.05-468.fc34.noarch                                                
  petsc-mpich-3.14.2-3.fc34.x86_64                                              
  petsc-mpich-devel-3.14.2-3.fc34.x86_64                                        
  petsc-openmpi-3.14.2-3.fc34.x86_64                                            
  petsc-openmpi-devel-3.14.2-3.fc34.x86_64                                      
  pixman-0.40.0-2.fc33.x86_64                                                   
  pmix-3.2.2-1.fc34.x86_64                                                      
  procps-ng-3.3.16-2.fc34.x86_64                                                
  ptscotch-mpich-6.1.0-1.fc34.x86_64                                            
  ptscotch-openmpi-6.1.0-1.fc34.x86_64                                          
  python-pip-wheel-20.3.3-3.fc34.noarch                                         
  python-rpm-macros-3.9-11.fc34.noarch                                          
  python-setuptools-wheel-51.1.2-1.fc34.noarch                                  
  python3-3.9.1-1.fc34.x86_64                                                   
  python3-Cython-0.29.21-4.fc34.x86_64                                          
  python3-babel-2.9.0-3.fc34.noarch                                             
  python3-cftime-1.3.0-1.fc34.x86_64                                            
  python3-chardet-3.0.4-18.fc33.noarch                                          
  python3-devel-3.9.1-1.fc34.x86_64                                             
  python3-docutils-0.16-3.fc33.noarch                                           
  python3-idna-2.10-2.fc33.noarch                                               
  python3-imagesize-1.2.0-2.fc33.noarch                                         
  python3-jinja2-2.11.2-7.fc34.noarch                                           
  python3-libs-3.9.1-1.fc34.x86_64                                              
  python3-markupsafe-1.1.1-9.fc34.x86_64                                        
  python3-netcdf4-1.5.4-1.fc34.x86_64                                           
  python3-numpy-1:1.20.0-1.rc2.fc34.x86_64                                      
  python3-numpy-f2py-1:1.20.0-1.rc2.fc34.x86_64                                 
  python3-packaging-20.8-1.fc34.noarch                                          
  python3-pygments-2.7.2-1.fc34.noarch                                          
  python3-pyparsing-2.4.7-4.fc33.noarch                                         
  python3-pysocks-1.7.1-7.fc33.noarch                                           
  python3-pytz-2020.5-1.fc34.noarch                                             
  python3-requests-2.25.0-1.fc34.noarch                                         
  python3-rpm-generators-11-12.fc34.noarch                                      
  python3-rpm-macros-3.9-11.fc34.noarch                                         
  python3-scipy-1.6.0-1.fc34.x86_64                                             
  python3-setuptools-51.1.2-1.fc34.noarch                                       
  python3-six-1.15.0-3.fc34.noarch                                              
  python3-snowballstemmer-1.9.0-7.fc33.noarch                                   
  python3-sphinx-1:3.3.1-2.fc34.noarch                                          
  python3-sphinx-theme-alabaster-0.7.12-10.fc33.noarch                          
  python3-sphinxcontrib-applehelp-1.0.2-2.fc33.noarch                           
  python3-sphinxcontrib-devhelp-1.0.2-2.fc33.noarch                             
  python3-sphinxcontrib-htmlhelp-1.0.3-2.fc33.noarch                            
  python3-sphinxcontrib-jsmath-1.0.1-9.fc33.noarch                              
  python3-sphinxcontrib-qthelp-1.0.3-2.fc33.noarch                              
  python3-sphinxcontrib-serializinghtml-1.1.4-2.fc33.noarch                     
  python3-urllib3-1.25.10-3.fc34.noarch                                         
  rdma-core-32.0-1.fc34.x86_64                                                  
  rpm-mpi-hooks-6-6.fc33.noarch                                                 
  scalapack-common-2.1.0-7.fc34.x86_64                                          
  scalapack-mpich-2.1.0-7.fc34.x86_64                                           
  scalapack-openmpi-2.1.0-7.fc34.x86_64                                         
  scotch-6.1.0-1.fc34.x86_64                                                    
  shared-mime-info-2.1-1.fc34.x86_64                                            
  suitesparse-5.4.0-5.fc34.x86_64                                               
  suitesparse64-5.4.0-5.fc34.x86_64                                             
  sundials-5.5.0-2.fc34.x86_64                                                  
  sundials-devel-5.5.0-2.fc34.x86_64                                            
  sundials-mpich-5.5.0-2.fc34.x86_64                                            
  sundials-mpich-devel-5.5.0-2.fc34.x86_64                                      
  sundials-openmpi-5.5.0-2.fc34.x86_64                                          
  sundials-openmpi-devel-5.5.0-2.fc34.x86_64                                    
  superlu_dist-mpich-1:6.1.1-6.fc34.x86_64                                      
  superlu_dist-openmpi-1:6.1.1-6.fc34.x86_64                                    
  systemd-247.2-1.fc34.x86_64                                                   
  systemd-pam-247.2-1.fc34.x86_64                                               
  systemd-rpm-macros-247.2-1.fc34.noarch                                        
  systemd-udev-247.2-1.fc34.x86_64                                              
  tbb-2020.3-2.fc33.x86_64                                                      
  tcl-1:8.6.10-5.fc34.x86_64                                                    
  tcsh-6.22.03-1.fc34.x86_64                                                    
  tk-1:8.6.10-5.fc33.x86_64                                                     
  ucx-1.9.0-1.fc34.x86_64                                                       
  urw-base35-bookman-fonts-20200910-1.fc34.noarch                               
  urw-base35-c059-fonts-20200910-1.fc34.noarch                                  
  urw-base35-d050000l-fonts-20200910-1.fc34.noarch                              
  urw-base35-fonts-20200910-1.fc34.noarch                                       
  urw-base35-fonts-common-20200910-1.fc34.noarch                                
  urw-base35-gothic-fonts-20200910-1.fc34.noarch                                
  urw-base35-nimbus-mono-ps-fonts-20200910-1.fc34.noarch                        
  urw-base35-nimbus-roman-fonts-20200910-1.fc34.noarch                          
  urw-base35-nimbus-sans-fonts-20200910-1.fc34.noarch                           
  urw-base35-p052-fonts-20200910-1.fc34.noarch                                  
  urw-base35-standard-symbols-ps-fonts-20200910-1.fc34.noarch                   
  urw-base35-z003-fonts-20200910-1.fc34.noarch                                  
  vim-filesystem-2:8.2.2311-1.fc34.noarch                                       
  xapian-core-libs-1.4.17-2.fc34.x86_64                                         
  xml-common-0.6.3-55.fc33.noarch                                               
  xorg-x11-font-utils-1:7.5-47.fc34.x86_64                                      
  xorg-x11-fonts-ISO8859-1-100dpi-7.5-26.fc34.noarch                            
  xorg-x11-server-utils-7.7-37.fc34.x86_64                                      
  zlib-devel-1.2.11-23.fc34.x86_64                                              

Complete!
Finish: build setup for bout++-4.3.2-4.fc34.src.rpm
Start: rpmbuild bout++-4.3.2-4.fc34.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1610841600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kZIKss
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf BOUT++-v4.3.2
+ /usr/bin/gzip -dc /builddir/build/SOURCES/BOUT++-v4.3.2.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd BOUT++-v4.3.2
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -rf externalpackages/mpark.variant/
+ mkdir -p externalpackages/mpark.variant/include/
++ find -L tools/pylib/ -type f
++ grep -v _boutcore_build
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/zoidberg.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_zoidberg.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_rzline.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_poloidal_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_fieldtracer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/test_field.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/rzline.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/progress.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/poloidal_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/plot.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/fieldtracer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/field.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/boundary.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/zoidberg/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/rms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_inp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_cxx.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_present.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_nonlinear.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_draw.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_corral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/grate2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/basic_info.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/post_bout/ListDict.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/crosslines.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/geqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/local_min_max.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/watch.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/volume_integral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/surface_average.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/spectrogram.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/showdata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/run_wrapper.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/read_geqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/radial_grid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/plotpolslice.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/plotdata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/options.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/moment_xyzt.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/mode_structure.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/linear_regression.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/int_func.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/idl_tabulate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/file_import.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/fft_integrate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/fft_deriv.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/efit_analyzer.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/datafile.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/contour.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/closest_line.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/check_scaling.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/calculus.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutwarnings.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutgrid.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/boutarray.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/ask.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/anim.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/analyse_equil_2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boututils/View3D.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/squashoutput.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/shiftz.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/settings.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/restart.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/processor_rearrange.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/pol_slice.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/mms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/mayavi2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/input.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/griddata.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/gen_surface.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/data.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/collect.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/cbdtoeqdsk.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/boutdata/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/bout_runners.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/bout_runners/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build )
+ sed -i '/^#!\//d' tools/pylib/.gitignore
+ autoreconf
autoreconf: configure.ac: AM_GNU_GETTEXT is used, but not AM_GNU_GETTEXT_VERSION
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.meTzmW
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ for mpi in mpich openmpi
+ mkdir build_mpich
+ cp -al CHANGELOG.md CITATION.bib CITATION.cff CMakeLists.txt CONTRIBUTING.md LICENSE LICENSE.GPL README.md aclocal.m4 aminclude_static.am autom4te.cache change_summary.md cmake configure configure.ac examples externalpackages include locale m4 make.config.in makefile makefile.submodules manual output.make requirements.txt src tests tools build-aux bin build_mpich
+ for mpi in mpich openmpi
+ mkdir build_openmpi
+ cp -al CHANGELOG.md CITATION.bib CITATION.cff CMakeLists.txt CONTRIBUTING.md LICENSE LICENSE.GPL README.md aclocal.m4 aminclude_static.am autom4te.cache change_summary.md cmake configure configure.ac examples externalpackages include locale m4 make.config.in makefile makefile.submodules manual output.make requirements.txt src tests tools build-aux bin build_openmpi
+ for mpi in mpich openmpi
+ pushd build_mpich
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2021-01-17 14:29:36.015190724 +0000
+++ ./configure	2021-01-17 14:29:36.243185144 +0000
@@ -1953,7 +1953,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./build-aux/config.sub
++ basename ./build-aux/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./build-aux/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './build-aux/config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./build-aux/config.guess
++ basename ./build-aux/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./build-aux/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './build-aux/config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./build-aux/ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-netcdf --with-hdf5 --enable-shared --with-system-mpark --libdir=/usr/lib64/mpich/lib --bindir=/usr/lib64/mpich/bin --sbindir=/usr/lib64/mpich/sbin --includedir=/usr/include/mpich-x86_64 --datarootdir=/usr/share --with-petsc --with-sundials
configure: WARNING: unrecognized options: --disable-dependency-tracking
checking for x86_64-redhat-linux-gnu-mpic++... no
checking for x86_64-redhat-linux-gnu-mpicxx... no
checking for x86_64-redhat-linux-gnu-mpiCC... no
checking for x86_64-redhat-linux-gnu-sxmpic++... no
checking for x86_64-redhat-linux-gnu-hcp... no
checking for x86_64-redhat-linux-gnu-mpxlC_r... no
checking for x86_64-redhat-linux-gnu-mpxlC... no
checking for x86_64-redhat-linux-gnu-mpixlcxx_r... no
checking for x86_64-redhat-linux-gnu-mpixlcxx... no
checking for x86_64-redhat-linux-gnu-mpg++... no
checking for x86_64-redhat-linux-gnu-mpc++... no
checking for x86_64-redhat-linux-gnu-mpCC... no
checking for x86_64-redhat-linux-gnu-cmpic++... no
checking for x86_64-redhat-linux-gnu-mpiFCC... no
checking for x86_64-redhat-linux-gnu-CCicpc... no
checking for x86_64-redhat-linux-gnu-pgCC... no
checking for x86_64-redhat-linux-gnu-pathCC... no
checking for x86_64-redhat-linux-gnu-sxc++... no
checking for x86_64-redhat-linux-gnu-xlC_r... no
checking for x86_64-redhat-linux-gnu-xlC... no
checking for x86_64-redhat-linux-gnu-bgxlC_r... no
checking for x86_64-redhat-linux-gnu-bgxlC... no
checking for x86_64-redhat-linux-gnu-openCC... no
checking for x86_64-redhat-linux-gnu-sunCC... no
checking for x86_64-redhat-linux-gnu-crayCC... no
checking for x86_64-redhat-linux-gnu-aCC... no
checking for x86_64-redhat-linux-gnu-CC... no
checking for x86_64-redhat-linux-gnu-g++... no
checking for x86_64-redhat-linux-gnu-c++... no
checking for x86_64-redhat-linux-gnu-gpp... no
checking for x86_64-redhat-linux-gnu-cxx... no
checking for x86_64-redhat-linux-gnu-cc++... no
checking for x86_64-redhat-linux-gnu-cl.exe... no
checking for x86_64-redhat-linux-gnu-FCC... no
checking for x86_64-redhat-linux-gnu-KCC... no
checking for x86_64-redhat-linux-gnu-RCC... no
checking for mpic++... mpic++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether mpic++ accepts -g... yes
checking for function MPI_Init... yes
checking for mpi.h... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for gmake... gmake
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking whether mpic++ supports C++11 features by default... yes
checking for sqrt in -lm... yes
checking how to run the C++ preprocessor... mpic++ -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for vprintf... yes
checking for _doprnt... no
checking does C++ compiler support __PRETTY_FUNCTION__... yes
checking for a sed that does not truncate output... /usr/bin/sed
checking whether to build with code coverage support... no
checking whether C++ compiler accepts -Werror=unknown-warning-option... no
checking whether C++ compiler accepts -we10006,10148... no
checking whether C++ compiler accepts -Wall... yes
checking whether C++ compiler accepts -Wextra... yes
checking whether C++ compiler accepts -Wnull-dereference... yes
checking whether C++ compiler accepts -Wno-cast-function-type... yes
configure: Enabling default optimisations
checking whether C++ compiler accepts -O2... yes
configure: Run-time checking enabled
configure:  -> Level 2 (Basic checking + stack tracing)
configure: Segmentation fault handling enabled
configure: Output coloring enabled
configure: Field name tracking disabled
configure: Signaling floating point exceptions disabled
checking for addr2line... yes
checking for popen... yes
checking for backtrace... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for library containing dladdr... -ldl
configure: Native backtrace enabled
./configure: line 6363: git: command not found
checking for fftw-wisdom... /usr/bin/fftw-wisdom
checking for fftw3.h... yes
checking for libfftw3... yes
checking for ncxx4-config... /usr/bin/ncxx4-config
configure:  -> NetCDF-4 support enabled
configure: Parallel-NetCDF support disabled
checking for gawk... gawk
checking for x86_64-redhat-linux-gnu-gcc... mpicc
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking how to run the C preprocessor... mpicc -E
checking for h5cc... /usr/bin/h5cc
checking for HDF5 type... serial
checking for HDF5 libraries... yes (version 1.10.6)
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for main in -lhdf5_hl... yes
configure: Found HDF5
configure: Parallel HDF5 support disabled
configure: Supported file formats: netCDF HDF5
checking for libblas... no
checking for liblapack... no
checking for x86_64-redhat-linux-gnu-pkg-config... /usr/bin/x86_64-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
configure: Using PETSC_DIR=, PETSC_ARCH=
checking for //conf... no
checking for //lib/petsc/conf... no
checking for PETSC... yes
checking PETSc has SUNDIALS support... no
checking for SUNDIALS config header... yes
checking for SUNDIALS minor version... ok
configure: Searching for SUNDIALS IDA library
checking for sundials-config... no
configure: WARNING: No sundials-config available, no path given, will try compiling with IDA anyway
checking if we can compile with SUNDIALS IDA... yes
configure: Using SUNDIALS IDA solver
configure: => IDA solver enabled
configure: Searching for SUNDIALS CVODE library
checking for sundials-config... (cached) no
checking if we can compile with SUNDIALS CVODE... configure: WARNING: No sundials-config available, no path given, will try compiling with CVODE anyway
yes
configure: Using SUNDIALS CVODE solver
configure: => CVODE solver enabled
configure: Searching for SUNDIALS ARKODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with ARKODE anyway
checking if we can compile with SUNDIALS ARKODE... yes
configure: Using SUNDIALS ARKODE solver
configure: => ARKODE solver enabled
configure: Scorep support disabled
checking for mpark.variant... yes
configure: PVODE being built without OpenMP support
configure: Building PVODE
configure: Successfully built PVODE
configure: Installing PVODE into BOUT++ sourcetree
checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/msgfmt
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... /bin/sh: build-aux/config.rpath: No such file or directory
done
checking 32-bit host C ABI... no
checking for ELF binary format... yes
checking for the common suffixes of directories in the library search path... lib,lib,lib64
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyPreferredLanguages... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
configure: Enabling language support with gettext
gmake: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/locale'
Building language:  de
Building language:  es
Building language:  fr
Building language:  zh_CN
Building language:  zh_TW
gmake: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/locale'
configure: creating ./config.status
config.status: creating make.config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: creating ./config.status
config.status: creating make.config
config.status: creating bin/bout-config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: -------------------------
configure:   Configuration summary  
configure: -------------------------
configure:   PETSc support           : yes (has SUNDIALS: no)
configure:   SLEPc support           : no
configure:   IDA support             : yes
configure:   CVODE support           : yes
configure:   ARKODE support          : yes
configure:   FFTW support            : yes
configure:   NetCDF support          : yes
configure:   Parallel-NetCDF support : no
configure:   HDF5 support            : yes (parallel: no)
configure:   MUMPS support           : no
configure:   Lapack support          : no
configure:   Scorep support          : no
configure:   OpenMP support          : no (schedule: )
configure:   Natural language support: yes (path: ${datarootdir}/locale)
configure: 
configure: -------------------------------
configure:   Data analysis configuration  
configure: -------------------------------
configure: 
configure: === IDL ===
configure: 
configure: Make sure that the tools/idllib directory is in your IDL_PATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:     export IDL_PATH=+/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/idllib:'<IDL_DEFAULT>':$IDL_PATH
configure: 
configure: === Python ===
configure: 
configure: Make sure that the tools/pylib directory is in your PYTHONPATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:    export PYTHONPATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/:$PYTHONPATH
configure: 
configure: *** Now run 'gmake' to compile BOUT++ ***
+ sed -e 's| -L/usr/lib64 | |g' -e 's| -Wl,--as-needed | |g' -i make.config
+ sed -e 's|-lblas|-lflexiblas|g' -e 's|-llapack|-lflexiblas|g' -i make.config
+ cat make.config
# configuration file for BOUT++
# September 2008: Converted to use autoconf. Can be manually edited
# for the (very) rare occasions when autoconf fails

# extra compilation flags:
# -DCHECK=lvl  Enables a host of additional checks on each operation
#              such as uninitialised data if lvl is > 0. -DCHECK=3
#              enables all tests, while -DCHECK=0 disables them.
#              Helps when debugging
# -DTRACK      Keeps track of variable names.
#              Enables more useful error messages
# for SSE2: -msse2 -mfpmath=sse
# 
# This must also specify one or more file formats
# -DPDBF  PDB format (need to include pdb_format.cxx)
# -DNCDF  NetCDF format (nc_format.cxx)

# PETSc config variables need to be first, else they may clobber other
# options (e.g. CXX, CXXFLAGS)
PETSC_DIR ?= 
PETSC_ARCH ?= 

SLEPC_DIR ?= 
SLEPC_ARCH ?= 


# These lines can be replaced in "make install" to point to install directories
# They are used in the CXXFLAGS variable below rather than hard-coding the directories
BOUT_INCLUDE_PATH=$(BOUT_TOP)/include
BOUT_LIB_PATH=$(BOUT_TOP)/lib
BOUT_CONFIG_FILE=$(BOUT_TOP)/make.config

prefix = /usr
exec_prefix = /usr
datarootdir = /usr/share

# This path to the locale (.mo) files is hard-wired into bout++.cxx at compile time
BOUT_LOCALE_PATH=${datarootdir}/locale

# Created this variable so that a user won't overwrite the CXXFLAGS variable
# on the command line, just add to this one
BOUT_FLAGS = $(CXXFLAGS) -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING="\"4.3.2\"" -DBOUT_VERSION_DOUBLE=4.32  -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=$(BOUT_LOCALE_PATH)   
#Use := here to force a "static" evaluation of the current state of BOUT_FLAGS to
#avoid infinite recursion that would arise if BOUT_FLAGS appeared on both sides of =
BOUT_FLAGS := $(BOUT_FLAGS) -DBOUT_FLAGS_STRING="$(BOUT_FLAGS)"

# Specify the MPI C++ compiler in CXX

CXX		= mpic++
CC      = $(CXX)

AR		= ar
ARFLAGS = cruU
RANLIB	= ranlib
MKDIR	= /usr/bin/mkdir -p

####################################################################
# Do not need to alter anything below
####################################################################

LD       = $(CXX)
LDFLAGS  = -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 
LIBS     = -ldl -lm  
CPPFLAGS = 

####################################################################
# Extra (optional) source files, includes and libs
# NOTE: EXTRA_SRC must include a solver (solver.cxx or ida_solver.cxx)
#       and a file format (nc_format.cxx or pdb_format.cxx)
####################################################################

EXTRA_INCS	  = $(CPPFLAGS)  -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc     
EXTRA_LIBS	  = $(LIBS)  -lfftw3 -lnetcdf_c++4 -lnetcdf  -lhdf5_hl -lhdf5  -lhdf5_hl -lsz -lz -ldl -lm -L/usr/lib64/mpich/lib -lpetsc   -lsundials_ida -lsundials_nvecparallel   -lsundials_cvode -lsundials_nvecparallel   -lsundials_arkode -lsundials_nvecparallel  -L$(BOUT_LIB_PATH) -lpvode -lpvpre  

PRECON_SOURCE = 

BOUT_VERSION  = 4.3.2

####################################################################
# These are used for compiling physics modules using BOUT++ library
####################################################################

# Files that are needed by configure and should be dependencies for 'all'

OBJ    = $(SOURCEC:%.cxx=%.o)
ifndef RELEASED
# If this is part of an packaged and installed installation, the user cannot
# write these files, so they shouldn't be changed. Thus only set this, in
# the non installed case.
LIB    = $(BOUT_LIB_PATH)/libbout++.a
LIB_SO = $(BOUT_LIB_PATH)/libbout++.so
endif

MPARK_VARIANT_INCLUDE_PATH=
BOUT_INCLUDE = -I$(BOUT_INCLUDE_PATH) $(CXXINCLUDE) $(EXTRA_INCS) 
BOUT_LIBS    = -lm -L$(BOUT_LIB_PATH) -lbout++ $(EXTRA_LIBS)

CHANGED = $(shell find -f $(BOUT_TOP)/include $(BOUT_TOP)/src -type f \( -name \*.cxx -or -name \*.h \) -newer $(LIB) -print 2> /dev/null)

# This will set a default if no TARGET is provided
TARGET				?= $(SOURCEC:%.cxx=%)

####################################################################
# Definining stuff for recursive make
####################################################################

# Phony targets since they are directory names
.PHONY: $(DIRS) lib install libfast runtest manual sphinx doxygen

ifneq ("$(TARGET)","libfast")
all: $(BOUT_CONFIG_FILE) $(DIRS) $(TARGET)
else
all: $(BOUT_TOP)/config.status $(BOUT_CONFIG_FILE) $(DIRS)
endif
libfast: $(BOUT_CONFIG_FILE) $(DIRS)

####################################################################
# Recursively run make through subdirs
####################################################################

ifeq ("$(TARGET)" , "lib")
$(DIRS):
# make $@ slowly using the old method where parallel builds can cause
# race conditions that 
	@$(MAKE) -s --no-print-directory TARGET=lib -C $@ all
else
ifeq ("$(TARGET)","libfast")
$(DIRS):
# make $@ using the libfast method, where all .o files
# are only created in the end
	@$(MAKE) -s --no-print-directory TARGET=$(TARGET) -C $@ $(TARGET)
else
MODULE_DIR?=$(shell pwd)
$(DIRS):
# MODULE_DIR: pass the module directory, where the libraries should be
# created.
# SUB_NAME is used for creating a library with the expected name.
# first a potential trailing slash is removed, and after that the
# directory name is extracted. This allows to e.g. specify a directory
# as fuu/bar/ and still get an archive named bar.a
	@$(MAKE) -s --no-print-directory MODULE_DIR=$(MODULE_DIR) SUB_NAME=$(shell basename $@) TARGET=sub -C $@
endif
endif

# Create 'lib' and 'include' incase they don't exist
$(BOUT_TOP)/include $(BOUT_TOP)/lib:
	$(MKDIR) $@

####################################################################
# Install header files and libraries
####################################################################

INSTALL = /usr/bin/install -c
INSTALL_PROGRAM = ${INSTALL}
INSTALL_DATA = ${INSTALL} -m 644

INSTALL_INCLUDE_PATH = $(DESTDIR)/usr/include/mpich-x86_64/bout++/

# A list of relative paths e.g. "fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo"
MO_FILES = $(shell cd locale; ls */LC_MESSAGES/libbout.mo)

install: libfast
	$(PRE_INSTALL)     # Pre-install commands follow.

	$(NORMAL_INSTALL)  # Normal commands follow.
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/{,pvode,bout/sys,bout/invert}
	$(MKDIR) $(DESTDIR)/{/usr/lib64/mpich/lib,/usr/lib64/mpich/bin,/usr/share/bout++/idllib}
	$(MKDIR) $(DESTDIR)//usr/share/bout++/pylib/{boutdata,boututils}
	$(INSTALL_DATA) include/*.hxx $(INSTALL_INCLUDE_PATH)
ifeq ("", "yes")
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/mpark
	$(INSTALL_DATA) $(MPARK_VARIANT_INCLUDE_PATH)/mpark/*.hpp $(INSTALL_INCLUDE_PATH)/mpark
endif
	$(INSTALL_DATA) include/pvode/*.h $(INSTALL_INCLUDE_PATH)/pvode/
	$(INSTALL_DATA) include/bout/*.hxx $(INSTALL_INCLUDE_PATH)/bout/
	$(INSTALL_DATA) include/bout/sys/*.hxx $(INSTALL_INCLUDE_PATH)/bout/sys/
	$(INSTALL_DATA) include/bout/invert/*.hxx $(INSTALL_INCLUDE_PATH)/bout/invert/
	$(INSTALL_DATA) lib/libbout++.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_DATA) lib/libpvode.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_DATA) lib/libpvpre.a $(DESTDIR)/usr/lib64/mpich/lib
	$(INSTALL_PROGRAM)  bin/bout-config $(DESTDIR)/usr/lib64/mpich/bin
	$(INSTALL_PROGRAM)  bin/bout-log-color $(DESTDIR)/usr/lib64/mpich/bin
	$(INSTALL_DATA)  tools/idllib/*.pro $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/idllib/README $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/pylib/boutdata/*.py $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(INSTALL_DATA)  tools/pylib/boututils/*.py $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(INSTALL_DATA)  make.config $(INSTALL_INCLUDE_PATH)
	for mo in $(MO_FILES); do $(MKDIR) $(DESTDIR)${datarootdir}/locale/`dirname $$mo`; $(INSTALL_DATA) locale/$$mo $(DESTDIR)${datarootdir}/locale/$$mo; done
	$(POST_INSTALL)    # Post-install commands follow.

	@# Modify paths in the bout-config script 
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config 
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(DESTDIR)/usr/lib64/mpich/bin/bout-config
endif

	@# Modify paths in the make.config file
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" $(INSTALL_INCLUDE_PATH)/make.config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
endif

#	Set the make.config as released, so the library isn't rebuild. This way the .a file doesn't need to be preserved/installed
	sed -i '26 i RELEASED                 = yes' $(INSTALL_INCLUDE_PATH)/make.config

uninstall:
	$(PRE_UNINSTALL)     # Pre-uninstall commands follow.

	$(NORMAL_UNINSTALL)  # Normal commands follow.
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(RM) -r $(DESTDIR)/usr/share/bout++/idllib/
	$(RM) $(DESTDIR)/usr/lib64/mpich/bin/bout-config
	$(RM) $(DESTDIR)/usr/lib64/mpich/bin/bout-log-color
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libbout++.a
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libpvode.a
	$(RM) $(DESTDIR)/usr/lib64/mpich/lib/libpvpre.a
	$(RM) -r  $(DESTDIR)/usr/include/mpich-x86_64/bout++/
	$(RM) $(DESTDIR)${datarootdir}/locale/*/LC_MESSAGES/libbout.mo

	$(POST_UNINSTALL)    # Post-uninstall commands follow.

####################################################################
# Builds the library with $(OBJ) which is defined from the SOURCEC variable
####################################################################

# Rules for downloading submodules
include $(BOUT_TOP)/makefile.submodules

ifeq ("$(TARGET)", "libfast")
libfast: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(OBJ) $(DIRS)
endif

ifeq ("$(TARGET)", "lib")
lib: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to libbout++.a"
	@$(AR) $(ARFLAGS) $(LIB) $(OBJ)
	@$(RANLIB) $(LIB)
endif
endif


ifeq ("$(TARGET)", "sub")
LIB=$(MODULE_DIR)/$(SUB_NAME).a
sub:$(LIB)

$(LIB): makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to $(LIB)"
	@LIBT=$(LIB).$$$$.a && \
		$(AR) $(ARFLAGS) $${LIBT} $(OBJ) && \
		$(RANLIB) $${LIBT} && \
		mv $${LIBT} $(LIB)
endif
endif

runtest:
	./runtest


ifneq ("$(TARGET)", "sub")
ifneq ("$(TARGET)", "libfast")
ifneq ("$(TARGET)", "lib")
ifneq ("$(TARGET)", "runtest")

####################################################################
# Make libbout++.a if it doesn't exist with the checklib target
####################################################################
libbout++.a:
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
 
####################################################################
# Make the target (e.g. gas_compress)
####################################################################
# first we remove a trailing slash, if present. Note that currently we
# dont support several trailing slashes, as in fuu/bar/// 
DIRS_=$(DIRS:%/=%)
# then we extract the directory name, in case it is a longer path
# We are not in a recipe, so # needs to be escaped
# $$ is an escaped $
DIRS__=$(shell for d in $(DIRS_) ; do basename $$d;done)
# now we can generate a list of libraries
SUB_LIBS=$(DIRS__:%=%.a)
$(SUB_LIBS):$(DIRS__)

$(SOURCEC): checklib
$(SOURCEC:%.cxx=%.o): $(LIB)
$(TARGET): | $(DIRS)
$(TARGET): makefile $(BOUT_CONFIG_FILE) $(OBJ) $(SUB_LIBS)
	@echo "  Linking" $(TARGET)
	@$(LD) $(LDFLAGS) -o $(TARGET) $(OBJ) $(SUB_LIBS) $(BOUT_LIBS)

checklib:
ifneq ("$(CHANGED)foo", "foo")
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
endif

endif
endif
endif
endif

# Ignore missing requirement files
-include .*.mk

# If it is a libfast target, track changes to rebuild library if needed
#
# Further track dependencies using gcc's -M feature:
# -MF  write the generated dependency rule to a file
# -MG  assume missing headers will be generated and don't stop with an error
# -MM  generate dependency rule for prerequisite, skipping system headers
# -MP  add phony target for each header to prevent errors when header is missing
# -MT  add a target to the generated dependency
# Ignore failure, in case some compiler does not support this
%.o: $(BOUT_CONFIG_FILE) %.cxx
	@echo "  Compiling " $(@:.o=.cxx)
	@$(CXX) $(BOUT_INCLUDE) $(BOUT_FLAGS) -c $(@:.o=.cxx) -o $@
ifeq ("$(TARGET)","libfast")
	test "$@" = "bout++.o" || touch $(BOUT_TOP)/lib/.last.o.file
endif

####################################################################
# Clean target. Pretty self explanatory.
# NOTE: See that double colon (::) below? That's signifies a rule that can be added to later
# See:
# http://owen.sj.ca.us/~rk/howto/slides/make/slides/makecolon.html
####################################################################

clean::
	-@$(RM) -rf $(OBJ) $(DEPS) $(TARGET)
	@for pp in $(DIRS); do echo "  " $$pp cleaned; $(MAKE) --no-print-directory -C $$pp clean; done
	@$(RM) -f $(SUB_LIBS)
	-@$(RM) .*.mk
	@test -f make.config && ( find src | grep '\.o$$' && echo "WARNING: Some object files remain - which might cause issues. Clean with $(MAKE) clean-remove-object-files" ) || exit 0

clean-remove-object-files:
	find src|grep '\.o$$' | xargs rm


distclean:: clean clean-tests
	@echo include cleaned
# Removing the externalpackage installation. When we have more packages, need a better way
	@$(RM) -rf $(BOUT_TOP)/include/pvode
	@echo lib cleaned
	@$(RM) -rf $(BOUT_TOP)/lib/*
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/lib/*.a
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/source/obj/*.o
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/precon/obj/*.o
	-@$(RM) -rf $(BOUT_TOP)/autom4te.cache make.config
	@echo externalpackages cleaned
	@touch $(BOUT_TOP)/configure
	@echo autom4te.cache cleaned

clean-tests: clean-unit-tests clean-integrated-tests clean-mms-tests

clean-unit-tests:
	@echo "   tests/unit cleaned"
	@$(MAKE) --no-print-directory -C tests/unit clean

clean-integrated-tests:
	@echo "   tests/integrated cleaned"
	@$(MAKE) --no-print-directory -C tests/integrated clean

clean-mms-tests:
	@echo "   tests/MMS cleaned"
	@$(MAKE) --no-print-directory -C tests/MMS clean

####################################################################
# Documentation
####################################################################

MANUAL_DIR=$(BOUT_TOP)/manual

doxygen:
	$(MAKE) -C $(MANUAL_DIR) doxygen

breathe-autogen:
	$(MAKE) -C $(MANUAL_DIR) breathe_autogen

sphinx-docs-html:
	$(MAKE) -C $(MANUAL_DIR) sphinx-html

sphinx-docs-latex:
	$(MAKE) -C $(MANUAL_DIR) sphinx-pdf

manual:
	$(MAKE) -C $(MANUAL_DIR)

manual-html:
	$(MAKE) -C $(MANUAL_DIR) html

manual-pdf:
	$(MAKE) -C $(MANUAL_DIR) pdf

python: libfast
	$(MAKE) -C tools/pylib python3

python2: libfast
	$(MAKE) -C tools/pylib python2

python-all:python python2

######################################################################
# Code coverage
######################################################################

GCOV = 
LCOV = 
GENHTML = 
abs_builddir = /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich


# Code coverage
#
# Optional:
#  - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting.
#    Multiple directories may be specified, separated by whitespace.
#    (Default: $(top_builddir))
#  - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated
#    by lcov for code coverage. (Default:
#    bout-coverage.info)
#  - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage
#    reports to be created. (Default:
#    bout-coverage)
#  - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage,
#    set to 0 to disable it and leave empty to stay with the default.
#    (Default: empty)
#  - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov
#    instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov
#    instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
#  - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov
#  - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the
#    collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
#  - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering
#    lcov instance. (Default: empty)
#  - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
#  - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the
#    genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml
#    instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore
#
# The generated report will be titled using the $(PACKAGE_NAME) and
# $(PACKAGE_VERSION). In order to add the current git hash to the title,
# use the git-version-gen script, available online.

# Optional variables
CODE_COVERAGE_DIRECTORY ?= $(abs_builddir)
CODE_COVERAGE_OUTPUT_FILE ?= bout-coverage.info
CODE_COVERAGE_OUTPUT_DIRECTORY ?= bout-coverage
CODE_COVERAGE_BRANCH_COVERAGE ?=
CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)"
CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?=
CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\
$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
CODE_COVERAGE_IGNORE_PATTERN ?= "*test*/*"

# Use recursive makes in order to ignore errors during check
check-code-coverage:
	@echo "Need to reconfigure with --enable-code-coverage"


# Capture code coverage data
code-coverage-capture: code-coverage-capture-hook
	@echo "Need to reconfigure with --enable-code-coverage"


# Hook rule executed before code-coverage-capture, overridable by the user
code-coverage-capture-hook:



GITIGNOREFILES ?=
GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)

.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean

+ make -j2 shared python
  Compiling  field.cxx
  Compiling  nc_format.cxx
  Compiling  ncxx4.cxx
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field2d.cxx
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from ncxx4.hxx:51,
                 from ncxx4.cxx:23:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pnetcdf.cxx
  Compiling  h5_format.cxx
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field3d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field3d.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field3d.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  datafile.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldperp.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fieldperp.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fieldperp.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_data.cxx
  Compiling  dataformat.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  formatfactory.cxx
  Compiling  fieldgroup.cxx
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from impls/netcdf4/ncxx4.hxx:51,
                 from formatfactory.cxx:8:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  cyclic.cxx
  Compiling  field_factory.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_parderiv.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parderiv_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldgenerators.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_tri.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  initialprofiles.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_band.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vecops.cxx
  Compiling  pdd.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  spt.cxx
  Compiling  vector2d.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/msg_stack.hxx:35,
                 from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/msg_stack.hxx:35,
                 from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vector3d.cxx
  Compiling  petsc_laplace.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  where.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mumps_laplace.cxx
  Compiling  globalfield.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cyclic_laplace.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  generated_fieldops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shoot_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_laplace.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_laplace.cxx
invert_laplace.cxx: In constructor 'Laplacian::Laplacian(Options*, CELL_LOC, Mesh*)':
invert_laplace.cxx:100:16: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                ^~~~~~~~
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx:100:30: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                              ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const FieldPerp&, FieldPerp&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:770:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  770 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const Field3D&, Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:800:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  800 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:831:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  831 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacefactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_alg.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_solver.cxx
  Compiling  naulin_laplace.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from multigrid_laplace.hxx:36,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutmesh.cxx
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/msg_stack.hxx:35,
                 from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/msg_stack.hxx:35,
                 from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexy.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscis.h:7,
                 from /usr/include/mpich-x86_64/petsc/petscvec.h:9,
                 from /usr/include/mpich-x86_64/petsc/petscmat.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscpc.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscis.h:7,
                 from /usr/include/mpich-x86_64/petsc/petscvec.h:9,
                 from /usr/include/mpich-x86_64/petsc/petscmat.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscpc.h:6,
                 from /usr/include/mpich-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-cyclic.cxx
  Compiling  shiftedmetric.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fci.cxx
  Compiling  laplacexz-petsc.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  identity.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromoptions.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fft_fftw.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromfile.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lapack_routines.cxx
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  physicsmodel.cxx
  Compiling  bilinear.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/bout.hxx:40,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/bout.hxx:40,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  smoothing.cxx
  Compiling  hermite_spline.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sourcex.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  monotonic_hermite_spline.cxx
  Compiling  gyro_average.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, BoutReal, int)':
gyro_average.cxx:170:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  170 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field2D&, int)':
gyro_average.cxx:187:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  187 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field3D&, int)':
gyro_average.cxx:194:37: warning: 'Field3D gyroPade0(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  194 |   return gyroPade0(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:175:9: note: declared here
  175 | Field3D gyroPade0(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, BoutReal, int)':
gyro_average.cxx:209:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  209 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field2D&, int)':
gyro_average.cxx:226:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  226 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field3D&, int)':
gyro_average.cxx:232:37: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  232 |   return gyroPade1(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field2D gyroPade1(const Field2D&, const Field2D&, int)':
gyro_average.cxx:238:34: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  238 |   tmp = gyroPade1(tmp, rho, flags);
      |                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, BoutReal, int)':
gyro_average.cxx:243:53: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:243:66: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field2D&, int)':
gyro_average.cxx:251:53: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:251:66: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field3D&, int)':
gyro_average.cxx:260:37: warning: 'Field3D gyroPade2(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  260 |   return gyroPade2(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:250:9: note: declared here
  250 | Field3D gyroPade2(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
  Compiling  snb.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lagrange_4pt.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../include/msg_stack.hxx:35,
                 from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  arkode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  difops.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh.cxx
  Compiling  ida.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  petsc.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/mpich-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/mpich-x86_64/petsc/petscsys.h:40,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
petsc.cxx: In function 'PetscErrorCode PetscMonitor(TS, PetscInt, PetscReal, Vec, void*)':
petsc.cxx:859:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |     ^~
In file included from /usr/include/mpich-x86_64/petsc/petscsys.h:1362,
                 from /usr/include/mpich-x86_64/petsc/petscbag.h:4,
                 from /usr/include/mpich-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/mpich-x86_64/petsc/petscerror.h:464:32: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  464 | #define CHKERRQ(ierr)          do {PetscErrorCode ierr__ = (ierr); if (PetscUnlikely(ierr__)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,ierr__,PETSC_ERROR_REPEAT," ");} while (0)
      |                                ^~
petsc.cxx:859:79: note: in expansion of macro 'CHKERRQ'
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |                                                                               ^~~~~~~
  Compiling  boundary_standard.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  snes.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from snes.hxx:38,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from snes.hxx:38,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  imex-bdf2.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  power.cxx
  Compiling  boundary_region.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from power.hxx:33,
                 from power.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from power.hxx:33,
                 from power.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  meshfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  slepc.cxx
  Compiling  karniadakis.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  surfaceiter.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4.cxx
  Compiling  coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  euler.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from euler.hxx:36,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from euler.hxx:36,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk3-ssp.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  index_derivs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf45.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cashkarp.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4simple.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf34.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkgeneric.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkscheme.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkschemefactory.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  split-rk.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solverfactory.cxx
In file included from impls/pvode/pvode.hxx:37,
                 from solverfactory.cxx:11:
../../include/pvode/nvector.h:93: warning: "PVEC_REAL_MPI_TYPE" redefined
   93 | #define PVEC_REAL_MPI_TYPE MPI_DOUBLE
      | 
In file included from /usr/include/mpich-x86_64/nvector/nvector_parallel.h:44,
                 from impls/arkode/arkode.hxx:47,
                 from solverfactory.cxx:3:
/usr/include/mpich-x86_64/sundials/sundials_mpi_types.h:38: note: this is the location of the previous definition
   38 | #define PVEC_REAL_MPI_TYPE    MPI_SUNREALTYPE
      | 
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parallel_boundary_region.cxx
  Compiling  parallel_boundary_op.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_ini.cxx
  Compiling  fv_ops.cxx
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/bout/../msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_netcdf.cxx
  Compiling  bout_types.cxx
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from options_netcdf.cxx:7:
/usr/include/mpich-x86_64/ncGroup.h: At global scope:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  boutexception.cxx
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from boutexception.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from boutexception.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  derivs.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  msg_stack.cxx
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  output.cxx
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  utils.cxx
  Compiling  optionsreader.cxx
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutcomm.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  timer.cxx
  Compiling  range.cxx
  Compiling  petsclib.cxx
  Compiling  expressionparser.cxx
  Compiling  slepclib.cxx
  Compiling  type_name.cxx
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout++.cxx
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
Recreating libbout++.a
make -C tools/pylib python3
Creating libbout++.so
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib'
PY=python3 make -C _boutcore_build pseudoinstall
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build'
  Generating boutcore.pyx
  Generating setup.py
  Generating helper.cxx
  Generating helper.h
  Generating resolve_enum.pxd
yes - <int>deflt
yes - <int>centre
yes - <int>xlow
yes - <int>ylow
yes - <int>zlow
yes - <int>vshift
yes - <int>deflt
yes - <int>u1
yes - <int>u2
yes - <int>c2
yes - <int>w2
yes - <int>w3
yes - <int>c4
yes - <int>u3
yes - <int>fft
yes - <int>split
yes - <int>s2
yes - <int>all
yes - <int>nobndry
yes - <int>nox
yes - <int>noy
yes - <int>noz
yes - <int>X
yes - <int>Y
yes - <int>Z
yes - <int>YAligned
yes - <int>YOrthogonal
yes - <int>Standard
yes - <int>Aligned
yes - <int>Standard
yes - <int>Average
yes - <int>C2L
yes - <int>L2C
yes - <int>Standard
yes - <int>StandardSecond
yes - <int>StandardFourth
yes - <int>Upwind
yes - <int>Flux
yes - <int>standard
yes - <int>simple
yes - <int>arakawa
yes - <int>ctu
yes - <int>arakawa_old
  Generating boutcpp.pxd
/usr/lib64/python3.9/distutils/extension.py:131: UserWarning: Unknown Extension options: 'language_level'
  warnings.warn(msg)
/usr/lib64/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build/boutcore.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
warning: resolve_enum.pxd:49:25: 'deflt' redeclared 
warning: resolve_enum.pxd:189:28: 'Standard' redeclared 
warning: resolve_enum.pxd:223:19: 'Standard' redeclared 
Compiling boutcore.pyx because it changed.
[1/1] Cythonizing boutcore.pyx
running build_ext
building 'boutcore' extension
creating build
creating build/temp.linux-x86_64-3.9
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c boutcore.cpp -o build/temp.linux-x86_64-3.9/boutcore.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from boutcore.cpp:902:
/usr/lib64/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_6DDX(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37690:96: warning: ‘Field3D DDX(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37690 |     __pyx_t_6 = DDX((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:95:34: note: declared here
   95 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDX, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_8D2DX2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37980:98: warning: ‘Field3D D2DX2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37980 |     __pyx_t_6 = D2DX2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:225:34: note: declared here
  225 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DX2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_10VDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38282:126: warning: ‘Field3D VDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38282 |     __pyx_t_6 = VDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:420:35: note: declared here
  420 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_12FDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38584:126: warning: ‘Field3D FDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38584 |     __pyx_t_6 = FDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:539:35: note: declared here
  539 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_14DDY(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38874:96: warning: ‘Field3D DDY(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38874 |     __pyx_t_6 = DDY((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:127:34: note: declared here
  127 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDY, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_16D2DY2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39164:98: warning: ‘Field3D D2DY2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39164 |     __pyx_t_6 = D2DY2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:257:34: note: declared here
  257 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DY2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_18VDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39466:126: warning: ‘Field3D VDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39466 |     __pyx_t_6 = VDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:454:35: note: declared here
  454 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_20FDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39768:126: warning: ‘Field3D FDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39768 |     __pyx_t_6 = FDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:573:35: note: declared here
  573 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_22DDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40058:96: warning: ‘Field3D DDZ(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40058 |     __pyx_t_6 = DDZ((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:159:34: note: declared here
  159 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDZ, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_24D2DZ2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40348:98: warning: ‘Field3D D2DZ2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40348 |     __pyx_t_6 = D2DZ2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:289:34: note: declared here
  289 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DZ2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_26VDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40650:126: warning: ‘Field3D VDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40650 |     __pyx_t_6 = VDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:488:35: note: declared here
  488 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_28FDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40952:126: warning: ‘Field3D FDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40952 |     __pyx_t_6 = FDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:607:35: note: declared here
  607 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: At global scope:
boutcore.cpp:25004:45: warning: ‘__pyx_obj_8boutcore_Vector2D* __pyx_f_8boutcore_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
25004 | static struct __pyx_obj_8boutcore_Vector2D *__pyx_f_8boutcore_v2dFromObj(Vector2D __pyx_v_i) {
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
boutcore.cpp:49221:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
49221 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_region(_object*)’:
boutcore.cpp:50045:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
50045 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_pw_8boutcore_45bracket(_object*, _object*, _object*)’:
boutcore.cpp:42619:141: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
42619 |   __pyx_t_1 = ((PyObject *)__pyx_f_8boutcore_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2569, __pyx_L1_error)
      |                                                                                                                                             ^
boutcore.cpp:50732:18: note: ‘__pyx_r’ was declared here
50732 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c boutexception_helper.cxx -o build/temp.linux-x86_64-3.9/boutexception_helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include -I/usr/include -I/usr/include -I/usr/include/mpich-x86_64/petsc -I. -I/usr/include/python3.9 -c helper.cxx -o build/temp.linux-x86_64-3.9/helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
mpic++ -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.9/boutcore.o build/temp.linux-x86_64-3.9/boutexception_helper.o build/temp.linux-x86_64-3.9/helper.o -L/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib -L/usr/lib64 -L/usr/lib64 -L/usr/lib64/mpich/lib -L/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib -L/usr/lib64 -lm -lbout++ -ldl -lm -lfftw3 -lnetcdf_c++4 -lnetcdf -lhdf5_hl -lhdf5 -lhdf5_hl -lsz -lz -ldl -lm -lpetsc -lsundials_ida -lsundials_nvecparallel -lsundials_cvode -lsundials_nvecparallel -lsundials_arkode -lsundials_nvecparallel -lpvode -lpvpre -o /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build/boutcore.cpython-39-x86_64-linux-gnu.so -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
cp boutcore*.so ..
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/_boutcore_build'
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib'
++ pwd
+ export LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ make -j2 -C manual html
make: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual'
cd doxygen && doxygen Doxyfile
warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1056 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 2149 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2171 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Doxygen version used: 1.9.1
Notice: Output directory 'bout' does not exist. I have created it for you.
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Reading /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/field/gen_fieldops.py...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/mumps_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/mumps_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/naulin_laplace.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/naulin_laplace.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/naulin_laplace.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/pdd.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/pdd.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/pdd.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/serial_tri.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/serial_tri.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/serial_tri.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/serial_tri.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/shoot_laplace.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/spt/spt.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/spt/spt.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/invert_laplace.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/laplacefactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/laplacefactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/laplacefactory.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexy/laplacexy.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/laplacexz-petsc.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/laplacexz.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/cyclic.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/cyclic.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/cyclic.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/invert_parderiv.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/parderiv_factory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/parderiv_factory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/parderiv_factory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_region.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_standard.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/gridfromfile.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/gridfromoptions.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/fv_ops.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/bilinear.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/hermite_spline.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/interpolation_factory.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/lagrange_4pt.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/monotonic_hermite_spline.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/monotonic_hermite_spline.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/mesh.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/mesh.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/meshfactory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/fci.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/fci.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/identity.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/shiftedmetric.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel_boundary_op.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel_boundary_region.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/surfaceiter.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/physicsmodel.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/smoothing.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/snb.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/sourcex.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/arkode/arkode.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/cvode/cvode.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/cvode/cvode.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/euler/euler.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/ida/ida.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/imex-bdf2.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/imex-bdf2.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/imex-bdf2.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/karniadakis/karniadakis.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/petsc/petsc.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/petsc/petsc.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/power/power.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/pvode/pvode.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/pvode/pvode.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/rk3-ssp.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/rk3-ssp.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/rk3-ssp.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk4/rk4.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
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Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkgeneric.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkscheme.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkscheme.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/slepc.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/snes.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/split-rk.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solver.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solver.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solverfactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/solverfactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/bout_types.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/bout_types.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutcomm.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutcomm.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutexception.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/boutexception.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/derivs.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/derivs.cxx...
Preprocessing /bui/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:1: warning: the name 'Base' supplied as the argument in the \file statement is not an input file
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:347: warning: no uniquely matching class member found for 
  const vector< int > NcFormat::getSize(const string &var)
Possible candidates:
  'const std::vector< int > NcFormat::getSize(const char *var) override' at line 77 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'const std::vector< int > NcFormat::getSize(const std::string &var) override' at line 78 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:558: warning: no uniquely matching class member found for 
  bool NcFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:599: warning: no uniquely matching class member found for 
  bool NcFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:677: warning: no uniquely matching class member found for 
  bool NcFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:739: warning: no uniquely matching class member found for 
  bool NcFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:841: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:882: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:964: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.cxx:1039: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:295: warning: no uniquely matching class member found for 
  bool PncFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:354: warning: no uniquely matching class member found for 
  bool PncFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:402: warning: no uniquely matching class member found for 
  bool PncFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:488: warning: no uniquely matching class member found for 
  bool PncFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:524: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:556: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:605: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.cxx:681: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:80: warning: no uniquely matching class member found for 
  BoundaryOpBase * BoundaryFactory::create(const string &name, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::create(const std::string &name, BoundaryRegionBase *region)' at line 70 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'BoundaryOpBase * BoundaryFactory::create(const char *name, BoundaryRegionBase *region)' at line 71 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:210: warning: no matching class member found for 
  BoundaryOpBase * BoundaryFactory::createFromOptions(const string &varname, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const std::string &varname, BoundaryRegionBase *region)'
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const char *varname, BoundaryRegionBase *region)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:313: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOp *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:326: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOpPar *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_factory.cxx:339: warning: no matching class member found for 
  void BoundaryFactory::addMod(BoundaryModifier *bmod, const string &name)
Possible candidates:
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const std::string &name)'
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const char *name)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1229: warning: no matching class member found for 
  Field2D Coordinates::DDZ(const MAYBE_UNUSED(Field2D &f), CELL_LOC loc, const std::string &method, const std::string &region)
Possible candidates:
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, const std::string &method, REGION region)'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method, REGION region=RGN_NOBNDRY)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1244: warning: no matching class member found for 
  Field2D Coordinates::Grad_par(const Field2D &var, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Grad_par(const Field2D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Grad_par(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Grad_par(const Field3D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Grad_par(const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/coordinates.cxx:1265: warning: no matching class member found for 
  Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx:59: warning: no matching class member found for 
  STAGGER Mesh::getStagger(CELL_LOC vloc, MAYBE_UNUSED(CELL_LOC inloc), const CELL_LOC outloc, const CELL_LOC allowedStaggerLoc) const
Possible candidates:
  'STAGGER Mesh::getStagger(const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
  'STAGGER Mesh::getStagger(const CELL_LOC vloc, const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'

lddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/expressionparser.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/expressionparser.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/msg_stack.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/msg_stack.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/optionparser.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/optionparser.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_ini.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_netcdf.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/options_netcdf.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/optionsreader.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/optionsreader.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/output.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/output.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/petsclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/petsclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/range.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/range.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/slepclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/slepclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/timer.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/timer.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/type_name.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/type_name.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/utils.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/utils.cxx...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data strucsh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
tures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating images for formulas in HTML...
Generating example documentation...
Generating file sources...
Generating file documentation...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_factory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_op.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/boundary_standard.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/array.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/assert.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/constants.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/coordinates.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/deprecated.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/deriv_store.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/expr.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/field_visitor.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/fieldgroup.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/format.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/fv_ops.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/globalfield.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/laplacexy.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/laplacexz.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invertable_operator.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/macro_for_each.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/monitor.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/openmpwrap.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/petsclib.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/physicsmodel.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/region.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/rkscheme.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/rvec.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/scorepwrapper.hxx...
Generat/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
ing docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/slepclib.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/snb.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/solver.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/solverfactory.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/expressionparser.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/gettext.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/range.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/timer.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/type_name.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/uncopyable.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/template_combinations.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout_types.hxx...
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Generating docs for file /builddir/build/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/serial_band.hxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/boundary_standard.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/fv_ops.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/boutmesh.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/index_derivs.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation.cxx...
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/bilinear.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/interpolation_factory.cxx./builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
..
Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/lagrange_4pt.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/karniadakis/karniadakis.cxx...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
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OUT++-v4.3.2/build_mpich/src/sys/range.cxx...
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Generating docs for compound Da/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
taFormat...
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Generating/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
 docs for compound LegacyModel...
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Generating docs for compound ParallelTransform...
Generating docs for compound ParallelTransformIdentity...
Generating docs for compound ParDerivFactory...
Generating docs for compound ParseException...
Generating docs for compound PetscLib...
Generating docs for compound PetscSolver...
Generating docs for compound PhysicsModel...
Generating docs for nested compound PhysicsModel::PhysicsModelMonitor...
Generating docs for compound PncFormat...
Generating docs for compound Power...
Generating docs for compound PowerSolver...
Generating docs for compound produceCombinations...
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Generating docs for compound PvodeSolver...
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Generating docs for compound RegisterInFactory< Solver, DerivedType >...
Generating docs for compound registerMethod...
Generating docs for compound RK3SSP...
Generating docs for compound RK4SIMPLEScheme...
Generating docs for compound RK4Solver...
Generating docs for compound RKF34Scheme...
Generating docs for compound RKF45Scheme...
Generating docs for compound RKGenericSolver...
Generating docs for compound RKScheme...
Generating docs for compound RKSchemeFactory...
Generating docs for compound RunMetrics...
Generating docs for compound SaveDerivsOp...
Generating docs for compound SaveVarOp...
Generating docs for compound Set...
Generating docs for compound ShiftedMetric...
Generating docs for nested compound ShiftedMetric::ParallelSlicePhase...
Generating docs for compound SlepcLib...
Generating docs for compound SlepcSolver...
Generating docs for compound snes_info...
Generating docs for compound SNESSolver...
Generating docs for compound Solver...
Generating docs for nested compound Solver::VarStr...
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Generating docs for compound SpecificInd...
Generating docs for compound SplitFluxDerivativeType...
Generating docs for compound SplitRK...
Generating docs for compound stencil...
Generating docs for compound Subtract...
Generating docs for compound SurfaceIter...
Generating docs for compound Tensor...
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Generating docs for nested compound Timer::timer_info...
Generating docs for compound TypeContainer...
Generating docs for compound Uncopyable...
Generating docs for compound Vector2D...
Generating docs for compound Vector3D...
Generating namespace index...
Generating docs for namespace bout
Generating docs for compound bout::HeatFluxSNB...
Generating docs for namespace bout::derivatives
Generating docs for namespace bout::derivatives::index
Generating docs for namespace bout::experimental
Generating docs for compound bout::experimental::CommandLineArgs...
Generating docs for compound bout::exp/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/array.hxx:385: warning: Unsupported xml/html tag <size> found
erimental::OptionsNetCDF...
Generating docs for namespace bout::fft
Generating docs for namespace bout::globals
Generating docs for namespace bout::inversion
Generating docs for compound bout::inversion::InvertableOperator...
Generating docs for namespace bout::utils
Generating docs for compound bout::utils::_Unique_if...
Generating docs for compound bout::utils::_Unique_if< T[]>...
Generating docs for compound bout::utils::_Unique_if< T[N]>...
Generating docs for compound bout::utils::function_traits...
Generating docs for compound bout::utils::function_traits< R(*)(Args...)>...
Generating docs for nested compound bout::utils::function_traits< R(*)(Args...)>::arg...
Generating docs for namespace bout::utils::details
Generating docs for compound bout::utils::details::CompareTypes...
Generating docs for compound bout::utils::details::CompareTypes< T, T >...
Generating docs for compound bout::utils::details::IsEqual...
Generating docs for compound bout::utils::details::StaticCastOrThrow...
Generating docs for compound bout::utils::details::ToString...
Generating docs for namespace FV
Generating docs for compound FV::Stencil1D...
Generating docs for compound FV::Upwind...
Generating docs for compound FV::Fromm...
Generating docs for compound FV::MinMod...
Generating docs for compound FV::MC...
Generating docs for namespace gen_fieldops
Generating docs for compound gen_fieldops::Field...
Generating docs for namespace pvode
Generating docs for compound pvode::bandmat_type...
Generating docs for compound pvode::CVodeMemRec...
Generating docs for compound pvode::machenv_type...
Generating docs for compound pvode::nvec_type...
Generating docs for compound pvode::pvbbddata_type...
Generating docs for compound pvode::SpgmrMemRec...
Generating docs for namespace SI
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating XML output...
Generating XML output for class bout::utils::_Unique_if
Generating XML output for class bout::utils::_Unique_if< T[]>
Generating XML output for class bout::utils::_Unique_if< T[N]>
Generating XML output for class Add
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>::arg
Generating XML output for class ArkodeSolver
Generating XML output for class Array
Generating XML output for class ArrayData
Generating XML output for class asExpr
Generating XML output for class asExpr< double >
Generating XML output for class asExpr< Field3D >
Generating XML output for class asExpr< float >
Generating XML output for class asExpr< int >
Generating XML output for class Options::AttributeType
Generating XML output for class pvode::bandmat_type
Generating XML output for class Bilinear
Generating XML output for class BinaryExpr
Generating XML output for class BinaryResult
Generating XML output for class BoundaryConstGradient
Generating XML output for class BoundaryConstLaplace
Generating XML output for class BoundaryDirichlet
Generating XML output for class BoundaryDirichlet_2ndOrder
Generating XML output for class BoundaryDirichlet_4thOrder
Generating XML output for class BoundaryDirichlet_O3
Generating XML output for class BoundaryDirichlet_O4
Generating XML output for class BoundaryDivCurl
Generating XML output for class BoundaryFactory
Generating XML output for class BoundaryFree
Generating XML output for class BoundaryFree_O2
Generating XML output for class BoundaryFree_O3
Generating XML output for class BoundaryFromFieldAligned
Generating XML output for class BoundaryModifier
Generating XML output for class BoundaryNeumann
Generating XML output for class BoundaryNeumann2
Generating XML output for class BoundaryNeumann_2ndOrder
Generating XML output for /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
class BoundaryNeumann_4thOrder
Generating XML output for class BoundaryNeumann_NonOrthogonal
Generating XML output for class BoundaryNeumann_O4
Generating XML output for class BoundaryNeumannPar
Generating XML output for class BoundaryOp
Generating XML output for class BoundaryOpBase
Generating XML output for class BoundaryOpPar
Generating XML output for class BoundaryOpPar_dirichlet
Generating XML output for class BoundaryOpPar_dirichlet_interp
Generating XML output for class BoundaryOpPar_dirichlet_O3
Generating XML output for class BoundaryOpPar_neumann
Generating XML output for class BoundaryRegion
Generating XML output for class BoundaryRegionBase
Generating XML output for class BoundaryRegionPar
Generating XML output for class BoundaryRegionXIn
Generating XML output for class BoundaryRegionXOut
Generating XML output for class BoundaryRegionYDown
Generating XML output for class BoundaryRegionYUp
Generating XML output for class BoundaryRelax
Generating XML output for class BoundaryRobin
Generating XML output for class BoundaryToFieldAligned
Generating XML output for class BoundaryWidth
Generating XML output for class BoundaryZeroLaplace
Generating XML output for class BoundaryZeroLaplace2
Generating XML output for class BoutComm
Generating XML output for class BoutException
Generating XML output for class BoutIterationFail
Generating XML output for class BoutMask
Generating XML output for class BoutMesh
Generating XML output for class BoutMonitor
Generating XML output for class BoutRhsFail
Generating XML output for class CASHKARPScheme
Generating XML output for class bout::experimental::CommandLineArgs
Generating XML output for class BoutMesh::CommHandle
Generating XML output for class bout::utils::details::CompareTypes
Generating XML output for class bout::utils::details::CompareTypes< T, T >
Generating XML output for class ConditionalOutput
Generating XML output for class Coordinates
Generating XML output for class pvode::CVodeMemRec
Generating XML output for class CvodeSolver
Generating XML output for class CyclicReduce
Generating XML output for class Datafile
Generating XML output for class DataFormat
Generating XML output for class DeferredFunction
Generating XML output for class DerivativeStore
Generating XML output for class DerivativeType
Generating XML output for class DirectionTypes
Generating XML output for class Divide
Generating XML output for class DummyOutput
Generating XML output for class EmptyFormat
Generating XML output for class enumWrapper
Generating XML output for class EulerSolver
Generating XML output for class ExpressionParser
Generating XML output for class exprTraits
Generating XML output for class exprTraits< double >
Generating XML output for class exprTraits< float >
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Generating XML output for class Factory
Generating XML output for class FCIMap
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Generating XML output for class fcmplx
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Generating XML output for class gen_fieldops::Field
Generating XML output for class Field2D
Generating XML output for class Field2DExpr
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Generating XML output for class Field3DExpr
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Generating XML output for class FieldATan
Generating XML output for class FieldBallooning
Generating XML output for class FieldBinary
Generating XML output for class FieldCos
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Generating XML output for class FieldData
Generating XML output for class FieldErf
Generating XML output for class FieldFactory
Generating XML output for class FieldFunction
Generating XML output for class FieldGaussian
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Generating XML output for class FieldGenOneArg
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Generating XML output for class FieldGroup
Generating XML output for class FieldHeaviside
Generating XML output for class FieldMax
Generating XML output for class FieldMin
Generating XML output for class FieldMixmode
Generating XML output for class FieldNu/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
ll
Generating XML output for class FieldPerp
Generating XML output for class FieldRound
Generating XML output for class FieldSin
Generating XML output for class FieldSinh
Generating XML output for class FieldSqrt
Generating XML output for class FieldTanh
Generating XML output for class FieldTanhHat
Generating XML output for class FieldValue
Generating XML output for class FieldValuePtr
Generating XML output for class FieldVisitor
Generating XML output for class FormatFactory
Generating XML output for class FV::Fromm
Generating XML output for class bout::utils::function_traits
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>
Generating XML output for class GlobalField
Generating XML output for class GlobalField2D
Generating XML output for class GlobalField3D
Generating XML output for class GridDataSource
Generating XML output for class GridFile
Generating XML output for class GridFromOptions
Generating XML output for class H5Format
Generating XML output for class bout::HeatFluxSNB
Generating XML output for class HermiteSpline
Generating XML output for class IdaSolver
Generating XML output for class IMEXBDF2
Generating XML output for class BoundaryRegionPar::IndexPoint
Generating XML output for class BoundaryRegionPar::Indices
Generating XML output for class Interpolation
Generating XML output for class InterpolationFactory
Generating XML output for class bout::inversion::InvertableOperator
Generating XML output for class InvertPar
Generating XML output for class InvertParCR
Generating XML output for class bout::utils::details::IsEqual
Generating XML output for class KarniadakisSolver
Generating XML output for class Lagrange4pt
Generating XML output for class LaplaceCyclic
Generating XML output for class LaplaceFactory
Generating XML output for class LaplaceMultigrid
Generating XML output for class LaplaceMumps
Generating XML output for class LaplaceNaulin
Generating XML output for class LaplacePDD
Generating XML output for class LaplacePetsc
Generating XML output for class LaplaceSerialBand
Generating XML output for class LaplaceSerialTri
Generating XML output for class LaplaceShoot
Generating XML output for class LaplaceSPT
Generating XML output for class LaplaceXY
Generating XML output for class LaplaceXZ
Generating XML output for class LaplaceXZcyclic
Generating XML output for class LaplaceXZpetsc
Generating XML output for class Laplacian
Generating XML output for class LegacyModel
Generating XML output for class ExpressionParser::LexInfo
Generating XML output for class Literal
Generating XML output for class LoadVarOp
Generating XML output for class pvode::machenv_type
Generating XML output for class Matrix
Generating XML output for class FV::MC
Generating XML output for class Mesh
Generating XML output for class MeshFactory
Generating XML output for class metaData
Generating XML output for class FV::MinMod
Generating XML output for class Monitor
Generating XML output for class MonotonicHermiteSpline
Generating XML output for class MsgStack
Generating XML output for class MsgStackItem
Generating XML output for class Multigrid1DP
Generating XML output for class Multigrid2DPf1D
Generating XML output for class MultigridAlg
Generating XML output for class MultigridSerial
Generating XML output for class multiostream
Generating XML output for class multioutbuf
Generating XML output for class multioutbuf_init
Generating XML output for class Multiply
Generating XML output for class NcFormat
Generating XML output for class Ncxx4
Generating XML output for class pvode::nvec_type
Generating XML output for class OptionINI
Generating XML output for class OptionParser
Generating XML output for class Options
Generating XML output for class bout::experimental::OptionsNetCDF
Generating XML output for class OptionsReader
Generating XML output for class Options::OptionValue
Generating XML output for class Output
Generating XML output for class ShiftedMetric::ParallelSlicePhase
Generating XML output for class ParallelTransform
Generating XML output for class ParallelTransformIdentity
Generating XML output for c/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
lass ParDerivFactory
Generating XML output for class ParseException
Generating XML output for class LaplacePDD::PDD_data
Generating XML output for class PetscLib
Generating XML output for class PetscSolver
Generating XML output for class PhysicsModel
Generating XML output for class PhysicsModel::PhysicsModelMonitor
Generating XML output for class PncFormat
Generating XML output for class Power
Generating XML output for class PowerSolver
Generating XML output for class produceCombinations
Generating XML output for class PromoteType
Generating XML output for class pvode::pvbbddata_type
Generating XML output for class PvodeSolver
Generating XML output for class RangeIterator
Generating XML output for class BoundaryRegionPar::RealPoint
Generating XML output for class Region
Generating XML output for class RegionStats
Generating XML output for class RegisterInFactory
Generating XML output for class RegisterInFactory< Solver, DerivedType >
Generating XML output for class registerMethod
Generating XML output for class RK3SSP
Generating XML output for class RK4SIMPLEScheme
Generating XML output for class RK4Solver
Generating XML output for class RKF34Scheme
Generating XML output for class RKF45Scheme
Generating XML output for class RKGenericSolver
Generating XML output for class RKScheme
Generating XML output for class RKSchemeFactory
Generating XML output for class RunMetrics
Generating XML output for class SaveDerivsOp
Generating XML output for class SaveVarOp
Generating XML output for class Set
Generating XML output for class ShiftedMetric
Generating XML output for class SlepcLib
Generating XML output for class SlepcSolver
Generating XML output for class snes_info
Generating XML output for class SNESSolver
Generating XML output for class Solver
Generating XML output for class SolverFactory
Generating XML output for class SpecificInd
Generating XML output for class pvode::SpgmrMemRec
Generating XML output for class SplitFluxDerivativeType
Generating XML output for class SplitRK
Generating XML output for class LaplaceSPT::SPT_data
Generating XML output for class bout::utils::details::StaticCastOrThrow
Generating XML output for class stencil
Generating XML output for class FV::Stencil1D
Generating XML output for class Subtract
Generating XML output for class SurfaceIter
Generating XML output for class Tensor
Generating XML output for class Timer
Generating XML output for class Timer::timer_info
Generating XML output for class bout::utils::details::ToString
Generating XML output for class TypeContainer
Generating XML output for class Uncopyable
Generating XML output for class FV::Upwind
Generating XML output for class Datafile::VarStr
Generating XML output for class Solver::VarStr
Generating XML output for class Vector2D
Generating XML output for class Vector3D
Generating XML output for class LaplaceXZpetsc::YSlice
Generating XML output for namespace @106
Generating XML output for namespace @107
Generating XML output for namespace @175
Generating XML output for namespace @176
Generating XML output for namespace @177
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Generating XML output for namespace @235
Generating XML output for namespace @240
Generating XML output for namespace @242
Generating XML output for namespace @244
Generating XML output for namespace @247
Generating XML output for namespace @251
Generating XML output for namespace @256
Generating XML output for namespace @4
Generating XML output for namespace bout
Generating XML output for namespace bout::derivatives
Generating XML output for namespace bout::derivatives::index
Generating XML output for namespace bout::experimental
Gene/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
rating XML output for namespace bout::fft
Generating XML output for namespace bout::globals
Generating XML output for namespace bout::inversion
Generating XML output for namespace bout::utils
Generating XML output for namespace bout::utils::details
Generating XML output for namespace FV
Generating XML output for namespace gen_fieldops
Generating XML output for namespace netCDF
Generating XML output for namespace pvode
Generating XML output for namespace SI
Generating XML output for namespace std
Generating XML output for file boundary_factory.hxx
Generating XML output for file boundary_op.hxx
Generating XML output for file boundary_region.hxx
Generating XML output for file boundary_standard.hxx
Generating XML output for file bout.hxx
Generating XML output for file array.hxx
Generating XML output for file assert.hxx
Generating XML output for file constants.hxx
Generating XML output for file coordinates.hxx
Generating XML output for file deprecated.hxx
Generating XML output for file deriv_store.hxx
Generating XML output for file expr.hxx
Generating XML output for file field_visitor.hxx
Generating XML output for file fieldgroup.hxx
Generating XML output for file format.hxx
Generating XML output for file fv_ops.hxx
Generating XML output for file generic_factory.hxx
Generating XML output for file globalfield.hxx
Generating XML output for file griddata.hxx
Generating XML output for file index_derivs.hxx
Generating XML output for file index_derivs_interface.hxx
Generating XML output for file laplacexy.hxx
Generating XML output for file laplacexz.hxx
Generating XML output for file invertable_operator.hxx
Generating XML output for file macro_for_each.hxx
Generating XML output for file mesh.hxx
Generating XML output for file monitor.hxx
Generating XML output for file openmpwrap.hxx
Generating XML output for file paralleltransform.hxx
Generating XML output for file petsclib.hxx
Generating XML output for file physicsmodel.hxx
Generating XML output for file region.hxx
Generating XML output for file rkscheme.hxx
Generating XML output for file rvec.hxx
Generating XML output for file scorepwrapper.hxx
Generating XML output for file slepclib.hxx
Generating XML output for file snb.hxx
Generating XML output for file solver.hxx
Generating XML output for file solverfactory.hxx
Generating XML output for file surfaceiter.hxx
Generating XML output for file expressionparser.hxx
Generating XML output for file gettext.hxx
Generating XML output for file range.hxx
Generating XML output for file timer.hxx
Generating XML output for file type_name.hxx
Generating XML output for file uncopyable.hxx
Generating XML output for file variant.hxx
Generating XML output for file template_combinations.hxx
Generating XML output for file traits.hxx
Generating XML output for file bout_types.hxx
Generating XML output for file boutcomm.hxx
Generating XML output for file boutexception.hxx
Generating XML output for file boutmain.hxx
Generating XML output for file cyclic_reduction.hxx
Generating XML output for file datafile.hxx
Generating XML output for file dataformat.hxx
Generating XML output for file dcomplex.hxx
Generating XML output for file derivs.hxx
Generating XML output for file difops.hxx
Generating XML output for file fft.hxx
Generating XML output for file field.hxx
Generating XML output for file field2d.hxx
Generating XML output for file field3d.hxx
Generating XML output for file field_data.hxx
Generating XML output for file field_factory.hxx
Generating XML output for file fieldperp.hxx
Generating XML output for file globals.hxx
Generating XML output for file gyro_average.hxx
Generating XML output for file initialprofiles.hxx
Generating XML output for file interpolation.hxx
Generating XML output for file interpolation_factory.hxx
Generating XML output for file invert_laplace.hxx
Generating XML output for file invert_parderiv.hxx
Generating XML output for file lapack_routines.hxx
Generating XML output for file mask.hxx
Generating XML output for file msg_stack.hxx
Generating XML output for file multiostream.hxx
Generating XML output for file options.hxx
Generating XML output for file options_netcdf.hxx
Generating XML output for file optionsreader.hxx
Generating XML output for file output.hxx
Generating XML output for file parallel_boundary_op.hxx
Generating XML output for file parallel_boundary_region.hxx
Generating XML output for file band.h
Generating XML output for file cvdiag.h
Generating XML output for file cvode.h
Generating XML output for file cvspgmr.h
Generating XML output for file iterativ.h
Generating XML output for file llnlmath.h
Generating XML output for file llnltyps.h
Generating XML output for file nvector.h
Generating XML output for file pvbbdpre.h
Generating XML output for file smalldense.h
Generating XML output for file spgmr.h
Generating XML output for file vector.h
Generating XML output for file smoothing.hxx
Generating XML output for file sourcex.hxx
Generating XML output for file stencils.hxx
Generating XML output for file unused.hxx
Generating XML output for file utils.hxx
Generating XML output for file vecops.hxx
Generating XML output for file vector2d.hxx
Generating XML output for file vector3d.hxx
Generating XML output for file where.hxx
Generating XML output for file bout++.cxx
Generating XML output for file field.cxx
Generating XML output for file field2d.cxx
Generating XML output for file field3d.cxx
Generating XML output for file field_data.cxx
Generating XML output for file field_factory.cxx
Generating XML output for file fieldgenerators.cxx
Generating XML output for file fieldgenerators.hxx
Generating XML output for file fieldgroup.cxx
Generating XML output for file fieldperp.cxx
Generating XML output for file gen_fieldops.py
Generating XML output for file generated_fieldops.cxx
Generating XML output for file globalfield.cxx
Generating XML output for file initialprofiles.cxx
Generating XML output for file vecops.cxx
Generating XML output for file vector2d.cxx
Generating XML output for file vector3d.cxx
Generating XML output for file where.cxx
Generating XML output for file datafile.cxx
Generating XML output for file dataformat.cxx
Generating XML output for file formatfactory.cxx
Generating XML output for file formatfactory.hxx
Generating XML output for file emptyformat.hxx
Generating XML output for file h5_format.cxx
Generating XML output for file h5_format.hxx
Generating XML output for file nc_format.cxx
Generating XML output for file nc_format.hxx
Generating XML output for file ncxx4.cxx
Generating XML output for file ncxx4.hxx
Generating XML output for file pnetcdf.cxx
Generating XML output for file pnetcdf.hxx
Generating XML output for file fft_fftw.cxx
Generating XML output for file lapack_routines.cxx
Generating XML output for file cyclic_laplace.cxx
Generating XML output for file cyclic_laplace.hxx
Generating XML output for file multigrid_alg.cxx
Generating XML output for file multigrid_laplace.cxx
Generating XML output for file multigrid_laplace.hxx
Generating XML output for file multigrid_solver.cxx
Generating XML output for file mumps_laplace.cxx
Generating XML output for file mumps_laplace.hxx
Generating XML output for file naulin_laplace.cxx
Generating XML output for file naulin_laplace.hxx
Generating XML output for file pdd.cxx
Generating XML output for file pdd.hxx
Generating XML output for file petsc_laplace.cxx
Generating XML output for file petsc_laplace.hxx
Generating XML output for file serial_band.cxx
Generating XML output for file serial_band.hxx
Generating XML output for file serial_tri.cxx
Generating XML output for file serial_tri.hxx
Generating XML output for file shoot_laplace.cxx
Generating XML output for file shoot_laplace.hxx
Generating XML output for file spt.cxx
Generating XML output for file spt.hxx
Generating XML output for file invert_laplace.cxx
Generating XML output for file laplacefactory.cxx
Generating XML output for file laplacefactory.hxx
Generating XML output for file laplacexy.cxx
Generating XML output for file laplacexz-cyclic.cxx
Generating XML output for file laplacexz-cyclic.hxx
Generating XML output for file laplacexz-petsc.cxx
Generating XML output for file laplacexz-petsc.hxx
Generating XML output/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
 for file laplacexz.cxx
Generating XML output for file cyclic.cxx
Generating XML output for file cyclic.hxx
Generating XML output for file invert_parderiv.cxx
Generating XML output for file parderiv_factory.cxx
Generating XML output for file parderiv_factory.hxx
Generating XML output for file boundary_factory.cxx
Generating XML output for file boundary_region.cxx
Generating XML output for file boundary_standard.cxx
Generating XML output for file coordinates.cxx
Generating XML output for file gridfromfile.cxx
Generating XML output for file gridfromoptions.cxx
Generating XML output for file difops.cxx
Generating XML output for file fv_ops.cxx
Generating XML output for file boutmesh.cxx
Generating XML output for file boutmesh.hxx
Generating XML output for file index_derivs.cxx
Generating XML output for file interpolation.cxx
Generating XML output for file bilinear.cxx
Generating XML output for file hermite_spline.cxx
Generating XML output for file interpolation_factory.cxx
Generating XML output for file lagrange_4pt.cxx
Generating XML output for file monotonic_hermite_spline.cxx
Generating XML output for file mesh.cxx
Generating XML output for file meshfactory.cxx
Generating XML output for file meshfactory.hxx
Generating XML output for file fci.cxx
Generating XML output for file fci.hxx
Generating XML output for file identity.cxx
Generating XML output for file shiftedmetric.cxx
Generating XML output for file parallel_boundary_op.cxx
Generating XML output for file parallel_boundary_region.cxx
Generating XML output for file surfaceiter.cxx
Generating XML output for file gyro_average.cxx
Generating XML output for file physicsmodel.cxx
Generating XML output for file smoothing.cxx
Generating XML output for file snb.cxx
Generating XML output for file sourcex.cxx
Generating XML output for file arkode.cxx
Generating XML output for file arkode.hxx
Generating XML output for file cvode.cxx
Generating XML output for file cvode.hxx
Generating XML output for file euler.cxx
Generating XML output for file euler.hxx
Generating XML output for file ida.cxx
Generating XML output for file ida.hxx
Generating XML output for file imex-bdf2.cxx
Generating XML output for file imex-bdf2.hxx
Generating XML output for file karniadakis.cxx
Generating XML output for file karniadakis.hxx
Generating XML output for file petsc.cxx
Generating XML output for file petsc.hxx
Generating XML output for file power.cxx
Generating XML output for file power.hxx
Generating XML output for file pvode.cxx
Generating XML output for file pvode.hxx
Generating XML output for file rk3-ssp.cxx
Generating XML output for file rk3-ssp.hxx
Generating XML output for file rk4.cxx
Generating XML output for file rk4.hxx
Generating XML output for file cashkarp.cxx
Generating XML output for file cashkarp.hxx
Generating XML output for file rk4simple.cxx
Generating XML output for file rk4simple.hxx
Generating XML output for file rkf34.cxx
Generating XML output for file rkf34.hxx
Generating XML output for file rkf45.cxx
Generating XML output for file rkf45.hxx
Generating XML output for file rkgeneric.cxx
Generating XML output for file rkgeneric.hxx
Generating XML output for file rkscheme.cxx
Generating XML output for file rkschemefactory.cxx
Generating XML output for file rkschemefactory.hxx
Generating XML output for file slepc.cxx
Generating XML output for file slepc.hxx
Generating XML output for file snes.cxx
Generating XML output for file snes.hxx
Generating XML output for file split-rk.cxx
Generating XML output for file split-rk.hxx
Generating XML output for file solver.cxx
Generating XML output for file solverfactory.cxx
Generating XML output for file bout_types.cxx
Generating XML output for file boutcomm.cxx
Generating XML output for file boutexception.cxx
Generating XML output for file derivs.cxx
Generating XML output for file expressionparser.cxx
Generating XML output for file msg_stack.cxx
Generating XML output for file options.cxx
Generating XML output for file optionparser.hxx
Generating XML output for file options_ini.cxx
Generating XML output for file options_ini.hxx
Generating XML output for file options_netcdf.cxx
Generating XML output for file optionsreader.cxx
Generating XML output for file output.cxx
Generating XML output for file petsclib.cxx
Generating XML output for file range.cxx
Generating XML output for file slepclib.cxx
Generating XML output for file timer.cxx
Generating XML output for file type_name.cxx
Generating XML output for file utils.cxx
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/arkode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/cashkarp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/cvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/data/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/euler/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/field/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/hdf5/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/ida/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/imex-bdf2/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/interpolation/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/bout/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/karniadakis/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexy/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/multigrid/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/mumps/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/naulin/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/netcdf4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/options/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/mesh/parallel/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/parderiv/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/pdd/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplacexz/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/physics/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/fileio/impls/pnetcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/power/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/include/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk3-ssp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rk4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rk4simple/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf34/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/impls/rkf45/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/rkgeneric/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_band/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/serial_tri/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/shoot/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/slepc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/snes/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/solver/impls/split-rk/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/invert/laplace/impls/spt/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/
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Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/src/sys/
Generating XML output for the main page
Running plantuml with JAVA...
lookup cache used 17446/65536 hits=224989 misses=18182
finished...
PYTHONPATH=../tools/pylib:$PYTHONPATH sphinx-build-3 -b html sphinx/ html/
Running Sphinx v3.3.1
breathe module not installed
recommonmark module not installed
making output directory... done
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 40 source files that are out of date
updating environment: [new config] 40 added, 0 changed, 0 removed
reading sources... [  2%] _apidoc/boutdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if sectionname is "root":
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if nested_sectionname is not "":
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if nested_sectionname is not "":
reading sources... [  5%] _apidoc/boututils
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if len(line) > 0 and line[0] is not '#':
No mlab available
reading sources... [  7%] _apidoc/zoidberg
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/poloidal_grid.py:32: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/rzline.py:18: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/plot.py:12: UserWarning: Couldn't import matplotlib, plotting not available.
  warnings.warn("Couldn't import matplotlib, plotting not available.")
reading sources... [ 10%] api_reference
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WARNING: missing attribute mentioned in :members: or __all__: module boutdata, attribute gen_surface
WARNING: missing attribute mentioned in :members: or __all__: module boutdata, attribute pol_slice
WARNING: autodoc: failed to import module 'cbdtoeqdsk' from module 'boutdata'; the following exception was raised:
No module named 'bunch'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'griddata' from module 'boutdata'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
WARNING: autodoc: failed to import module 'mms' from module 'boutdata'; the following exception was raised:
No module named 'sympy'
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/restart.py:docstring of boutdata.restart.normal:55: WARNING: Footnote [1] is not referenced.
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute calculus
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute closest_line
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
looking for now-outdated files... WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute linear_regression
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute run_wrapper
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'contour' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_integrate' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'plotdata' from module 'boututils'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'plotpolslice' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'read_geqdsk' from module 'boututils'; the following exception was raised:
No module named 'bunch'
WARNING: autodoc: failed to import module 'showdata' from module 'boututils'; the following exception was raised:
No module named 'matplotlib'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/field.py:docstring of zoidberg.field.MagneticField.attributes:1: WARNING: duplicate object description of zoidberg.field.MagneticField.attributes, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/field.py:docstring of zoidberg.field.MagneticField.boundary:1: WARNING: duplicate object description of zoidberg.field.MagneticField.boundary, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg:1: WARNING: duplicate object description of zoidberg, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg.make_maps:1: WARNING: duplicate object description of zoidberg.make_maps, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/zoidberg/__init__.py:docstring of zoidberg.write_maps:1: WARNING: duplicate object description of zoidberg.write_maps, other instance in _apidoc/zoidberg, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:75: WARNING: Definition list ends without a blank line; unexpected unindent.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/nonlocal.rst:119: WARNING: malformed hyperlink target.
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_deriv
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute fft_integrate
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute int_func
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute mode_structure
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute shell
WARNING: missing attribute mentioned in :members: or __all__: module boututils, attribute showdata
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/__init__.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
WARNING: autodoc: failed to import module 'boutcore'; the following exception was raised:
/usr/lib64/mpich/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
none found
pickling environment... done
checking consistency... done
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst: WARNING: document isn't included in any toctree
preparing documents... done
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tools/pylib/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: random-quick-start (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: ../_breathe_autogen/file/field2d_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: ../_breathe_autogen/file/field3d_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: ../_breathe_autogen/file/field__data_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: ../_breathe_autogen/file/initialprofiles_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: ../_breathe_autogen/file/vecops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: ../_breathe_autogen/file/vector2d_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: ../_breathe_autogen/file/vector3d_8cxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:145: WARNING: unknown document: ../_breathe_autogen/file/formatfactory_8cxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: ../_breathe_autogen/file/nc__format_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:165: WARNING: unknown document: ../_breathe_autogen/file/nc__format_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:169: WARNING: unknown document: ../_breathe_autogen/file/ncxx4_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: ../_breathe_autogen/file/ncxx4_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:184: WARNING: unknown document: ../_breathe_autogen/file/fft__fftw_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:184: WARNING: unknown document: ../_breathe_autogen/file/fft_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:193: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: ../_breathe_autogen/file/laplacefactory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:197: WARNING: unknown document: ../_breathe_autogen/file/laplacefactory_8cxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:205: WARNING: unknown document: ../_breathe_autogen/file/serial__tri_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: ../_breathe_autogen/file/serial__band_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:211: WARNING: unknown document: ../_breathe_autogen/file/serial__band_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:215: WARNING: unknown document: ../_breathe_autogen/file/spt_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:217: WARNING: unknown document: ../_breathe_autogen/file/spt_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:221: WARNING: unknown document: ../_breathe_autogen/file/pdd_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:223: WARNING: unknown document: ../_breathe_autogen/file/pdd_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: ../_breathe_autogen/file/invert__parderiv_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:232: WARNING: unknown document: ../_breathe_autogen/file/parderiv__factory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: ../_breathe_autogen/file/parderiv__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: ../_breathe_autogen/file/serial_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:242: WARNING: unknown document: ../_breathe_autogen/file/serial_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:246: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:248: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:252: WARNING: unknown document: ../_breathe_autogen/file/lapack__routines_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:256: WARNING: unknown document: ../_breathe_autogen/file/boundary__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:260: WARNING: unknown document: ../_breathe_autogen/file/boundary__region_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:265: WARNING: unknown document: ../_breathe_autogen/file/boundary__standard_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: ../_breathe_autogen/file/interpolation_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:277: WARNING: unknown document: ../_breathe_autogen/file/mesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:285: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:294: WARNING: unknown document: ../_breathe_autogen/file/gyro__average_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: ../_breathe_autogen/file/smoothing_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:299: WARNING: unknown document: ../_breathe_autogen/file/sourcex_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:305: WARNING: unknown document: ../_breathe_autogen/file/solver_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:311: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:317: WARNING: unknown document: ../_breathe_autogen/file/cvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:321: WARNING: unknown document: ../_breathe_autogen/file/cvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:325: WARNING: unknown document: ../_breathe_autogen/file/ida_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:329: WARNING: unknown document: ../_breathe_autogen/file/ida_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:333: WARNING: unknown document: ../_breathe_autogen/file/petsc_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:336: WARNING: unknown document: ../_breathe_autogen/file/petsc_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:340: WARNING: unknown document: ../_breathe_autogen/file/pvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:344: WARNING: unknown document: ../_breathe_autogen/file/pvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:348: WARNING: unknown document: ../_breathe_autogen/file/boutcomm_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:350: WARNING: unknown document: ../_breathe_autogen/file/boutexception_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: undefined label: sec-derivatives (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:359: WARNING: unknown document: ../_breathe_autogen/file/msg__stack_8cxx
generating indices... /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:366: WARNING: unknown document: ../_breathe_autogen/file/options_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:370: WARNING: unknown document: ../_breathe_autogen/file/optionsreader_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:372: WARNING: unknown document: ../_breathe_autogen/file/output_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:374: WARNING: unknown document: ../_breathe_autogen/file/range_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:378: WARNING: unknown document: ../_breathe_autogen/file/stencils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:382: WARNING: unknown document: ../_breathe_autogen/file/timer_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:386: WARNING: unknown document: ../_breathe_autogen/file/utils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:392: WARNING: unknown document: ../_breathe_autogen/file/optionparser_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:394: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/code_layout.rst:396: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'mesh:maxregionblocksize'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    mesh:maxregionblocksize
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      mesh:maxregionblocksize
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'BOUT.inp'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    BOUT.inp
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      BOUT.inp
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/griddata_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:13: WARNING: unknown document: ../_breathe_autogen/file/dataformat_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/file_io.rst:268: WARNING: Unparseable C++ cross-reference: 'restart.redistribute'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 7]
    restart.redistribute
    -------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 7]
      restart.redistribute
      -------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field2d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field3d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:182: WARNING: Unparseable C++ cross-reference: 'return\n0.5*(f.p - f.m);'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
    return
  0.5*(f.p - f.m);
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:192: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:196: WARNING: Unparseable C++ cross-reference: '1'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    1
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:221: WARNING: Unparseable C++ cross-reference: 'REGISTER_DERIVATIVE(DDX_C2)()'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 19]
    REGISTER_DERIVATIVE(DDX_C2)()
    -------------------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Invalid C++ declaration: Expected end of definition or ;. [error at 27]
      REGISTER_DERIVATIVE(DDX_C2)()
      ---------------------------^
  If the function has a return type:
    Error in declarator
    If declarator-id with parameters-and-qualifiers:
      Invalid C++ declaration: Expected identifier in nested name. [error at 19]
        REGISTER_DERIVATIVE(DDX_C2)()
        -------------------^
    If parenthesis in noptr-declarator:
      Error in declarator or parameters-and-qualifiers
      If pointer to member declarator:
        Invalid C++ declaration: Expected '::' in pointer to member (function). [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
      If declarator-id:
        Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:238: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/differential_operators.rst:278: WARNING: Could not lex literal_block as "cpp". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/installing.rst:190: WARNING: Unparseable C++ cross-reference: 'export LC_CTYPE=C.utf8'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
    export LC_CTYPE=C.utf8
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/installing.rst:358: WARNING: undefined label: sec-install-bout (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:30: WARNING: Unparseable C++ cross-reference: 'examples/invertable_operator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 8]
    examples/invertable_operator
    --------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 8]
      examples/invertable_operator
      --------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable_ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable_ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/laplacian.rst:186: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/nonlocal.rst:117: WARNING: undefined label: tab-snb-options
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/output_and_post.rst:587: WARNING: Could not lex literal_block as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/sphinx/user_docs/time_integration.rst:916: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
genindex py-modindex done
writing additional pages... search done
copying images... [  4%] figs/layout1.png
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copying images... [ 13%] figs/memory.png
copying images... [ 17%] user_docs/../figs/fluid_norm_mc.png
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copying images... [ 30%] figs/topology_schematic.png
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copying images... [ 39%] figs/grid_gen.png
copying images... [ 43%] user_docs/../figs/zoidberg/elliptic_grid.png
copying images... [ 47%] user_docs/../figs/zoidberg/poincare.png
copying images... [ 52%] figs/5PointStencilMesh.png
copying images... [ 56%] figs/5PointStencilMeshWithStencil.png
copying images... [ 60%] figs/5PointStencilMatrix.png
copying images... [ 65%] figs/5PointStencilGlobalIndices.png
copying images... [ 69%] figs/par_laplace.png
copying images... [ 73%] figs/snb-sinusoidal.png
copying images... [ 78%] figs/snb-step.png
copying images... [ 82%] figs/interchange_inst_test.png
copying images... [ 86%] figs/sod_result.png
copying images... [ 91%] figs/folder_tree.png
copying images... [ 95%] figs/stagLocations.png
copying images... [100%] figs/init_balloon.png

copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 180 warnings.

The HTML pages are in html.
Documentation available in file:///builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual/html/index.html
make: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/manual'
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib;' export 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
++ export LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ popd
+ for mpi in mpich openmpi
+ pushd build_openmpi
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1:/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/lib:1:/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./tools/pdb2idl/configure
+ diff -u ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ mv ./tools/pdb2idl/configure.backup ./tools/pdb2idl/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2021-01-17 14:29:36.015190724 +0000
+++ ./configure	2021-01-17 14:41:13.571107363 +0000
@@ -1953,7 +1953,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./build-aux/config.sub
++ basename ./build-aux/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./build-aux/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './build-aux/config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./build-aux/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./build-aux/config.guess
++ basename ./build-aux/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./build-aux/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './build-aux/config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./build-aux/ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-netcdf --with-hdf5 --enable-shared --with-system-mpark --libdir=/usr/lib64/openmpi/lib --bindir=/usr/lib64/openmpi/bin --sbindir=/usr/lib64/openmpi/sbin --includedir=/usr/include/openmpi-x86_64 --datarootdir=/usr/share --with-petsc --with-sundials
configure: WARNING: unrecognized options: --disable-dependency-tracking
checking for x86_64-redhat-linux-gnu-mpic++... no
checking for x86_64-redhat-linux-gnu-mpicxx... no
checking for x86_64-redhat-linux-gnu-mpiCC... no
checking for x86_64-redhat-linux-gnu-sxmpic++... no
checking for x86_64-redhat-linux-gnu-hcp... no
checking for x86_64-redhat-linux-gnu-mpxlC_r... no
checking for x86_64-redhat-linux-gnu-mpxlC... no
checking for x86_64-redhat-linux-gnu-mpixlcxx_r... no
checking for x86_64-redhat-linux-gnu-mpixlcxx... no
checking for x86_64-redhat-linux-gnu-mpg++... no
checking for x86_64-redhat-linux-gnu-mpc++... no
checking for x86_64-redhat-linux-gnu-mpCC... no
checking for x86_64-redhat-linux-gnu-cmpic++... no
checking for x86_64-redhat-linux-gnu-mpiFCC... no
checking for x86_64-redhat-linux-gnu-CCicpc... no
checking for x86_64-redhat-linux-gnu-pgCC... no
checking for x86_64-redhat-linux-gnu-pathCC... no
checking for x86_64-redhat-linux-gnu-sxc++... no
checking for x86_64-redhat-linux-gnu-xlC_r... no
checking for x86_64-redhat-linux-gnu-xlC... no
checking for x86_64-redhat-linux-gnu-bgxlC_r... no
checking for x86_64-redhat-linux-gnu-bgxlC... no
checking for x86_64-redhat-linux-gnu-openCC... no
checking for x86_64-redhat-linux-gnu-sunCC... no
checking for x86_64-redhat-linux-gnu-crayCC... no
checking for x86_64-redhat-linux-gnu-aCC... no
checking for x86_64-redhat-linux-gnu-CC... no
checking for x86_64-redhat-linux-gnu-g++... no
checking for x86_64-redhat-linux-gnu-c++... no
checking for x86_64-redhat-linux-gnu-gpp... no
checking for x86_64-redhat-linux-gnu-cxx... no
checking for x86_64-redhat-linux-gnu-cc++... no
checking for x86_64-redhat-linux-gnu-cl.exe... no
checking for x86_64-redhat-linux-gnu-FCC... no
checking for x86_64-redhat-linux-gnu-KCC... no
checking for x86_64-redhat-linux-gnu-RCC... no
checking for mpic++... mpic++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether mpic++ accepts -g... yes
checking for function MPI_Init... yes
checking for mpi.h... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for gmake... gmake
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking whether mpic++ supports C++11 features by default... yes
checking for sqrt in -lm... yes
checking how to run the C++ preprocessor... mpic++ -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for vprintf... yes
checking for _doprnt... no
checking does C++ compiler support __PRETTY_FUNCTION__... yes
checking for a sed that does not truncate output... /usr/bin/sed
checking whether to build with code coverage support... no
checking whether C++ compiler accepts -Werror=unknown-warning-option... no
checking whether C++ compiler accepts -we10006,10148... no
checking whether C++ compiler accepts -Wall... yes
checking whether C++ compiler accepts -Wextra... yes
checking whether C++ compiler accepts -Wnull-dereference... yes
checking whether C++ compiler accepts -Wno-cast-function-type... yes
configure: Enabling default optimisations
checking whether C++ compiler accepts -O2... yes
configure: Run-time checking enabled
configure:  -> Level 2 (Basic checking + stack tracing)
configure: Segmentation fault handling enabled
configure: Output coloring enabled
configure: Field name tracking disabled
configure: Signaling floating point exceptions disabled
checking for addr2line... yes
checking for popen... yes
checking for backtrace... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for library containing dladdr... -ldl
configure: Native backtrace enabled
./configure: line 6363: git: command not found
checking for fftw-wisdom... /usr/bin/fftw-wisdom
checking for fftw3.h... yes
checking for libfftw3... yes
checking for ncxx4-config... /usr/bin/ncxx4-config
configure:  -> NetCDF-4 support enabled
configure: Parallel-NetCDF support disabled
checking for gawk... gawk
checking for x86_64-redhat-linux-gnu-gcc... mpicc
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking how to run the C preprocessor... mpicc -E
checking for h5cc... /usr/bin/h5cc
checking for HDF5 type... serial
checking for HDF5 libraries... yes (version 1.10.6)
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for main in -lhdf5_hl... yes
configure: Found HDF5
configure: Parallel HDF5 support disabled
configure: Supported file formats: netCDF HDF5
checking for libblas... no
checking for liblapack... no
checking for x86_64-redhat-linux-gnu-pkg-config... /usr/bin/x86_64-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
configure: Using PETSC_DIR=, PETSC_ARCH=
checking for //conf... no
checking for //lib/petsc/conf... no
checking for PETSC... yes
checking PETSc has SUNDIALS support... no
checking for SUNDIALS config header... yes
checking for SUNDIALS minor version... ok
configure: Searching for SUNDIALS IDA library
checking for sundials-config... no
checking if we can compile with SUNDIALS IDA... configure: WARNING: No sundials-config available, no path given, will try compiling with IDA anyway
yes
configure: Using SUNDIALS IDA solver
configure: => IDA solver enabled
configure: Searching for SUNDIALS CVODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with CVODE anyway
checking if we can compile with SUNDIALS CVODE... yes
configure: Using SUNDIALS CVODE solver
configure: => CVODE solver enabled
configure: Searching for SUNDIALS ARKODE library
checking for sundials-config... (cached) no
configure: WARNING: No sundials-config available, no path given, will try compiling with ARKODE anyway
checking if we can compile with SUNDIALS ARKODE... yes
configure: Using SUNDIALS ARKODE solver
configure: => ARKODE solver enabled
configure: Scorep support disabled
checking for mpark.variant... yes
configure: PVODE being built without OpenMP support
configure: Building PVODE
configure: Successfully built PVODE
configure: Installing PVODE into BOUT++ sourcetree
checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/msgfmt
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... /bin/sh: build-aux/config.rpath: No such file or directory
done
checking 32-bit host C ABI... no
checking for ELF binary format... yes
checking for the common suffixes of directories in the library search path... lib,lib,lib64
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyPreferredLanguages... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
configure: Enabling language support with gettext
gmake: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/locale'
Building language:  de
Building language:  es
Building language:  fr
Building language:  zh_CN
Building language:  zh_TW
gmake: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/locale'
configure: creating ./config.status
config.status: creating make.config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: creating ./config.status
config.status: creating make.config
config.status: creating bin/bout-config
config.status: executing po-directories commands
configure: WARNING: unrecognized options: --disable-dependency-tracking
configure: -------------------------
configure:   Configuration summary  
configure: -------------------------
configure:   PETSc support           : yes (has SUNDIALS: no)
configure:   SLEPc support           : no
configure:   IDA support             : yes
configure:   CVODE support           : yes
configure:   ARKODE support          : yes
configure:   FFTW support            : yes
configure:   NetCDF support          : yes
configure:   Parallel-NetCDF support : no
configure:   HDF5 support            : yes (parallel: no)
configure:   MUMPS support           : no
configure:   Lapack support          : no
configure:   Scorep support          : no
configure:   OpenMP support          : no (schedule: )
configure:   Natural language support: yes (path: ${datarootdir}/locale)
configure: 
configure: -------------------------------
configure:   Data analysis configuration  
configure: -------------------------------
configure: 
configure: === IDL ===
configure: 
configure: Make sure that the tools/idllib directory is in your IDL_PATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:     export IDL_PATH=+/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/idllib:'<IDL_DEFAULT>':$IDL_PATH
configure: 
configure: === Python ===
configure: 
configure: Make sure that the tools/pylib directory is in your PYTHONPATH
configure: e.g. by adding to your ~/.bashrc file
configure: 
configure:    export PYTHONPATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/:$PYTHONPATH
configure: 
configure: *** Now run 'gmake' to compile BOUT++ ***
+ sed -e 's| -L/usr/lib64 | |g' -e 's| -Wl,--as-needed | |g' -i make.config
+ sed -e 's|-lblas|-lflexiblas|g' -e 's|-llapack|-lflexiblas|g' -i make.config
+ cat make.config
# configuration file for BOUT++
# September 2008: Converted to use autoconf. Can be manually edited
# for the (very) rare occasions when autoconf fails

# extra compilation flags:
# -DCHECK=lvl  Enables a host of additional checks on each operation
#              such as uninitialised data if lvl is > 0. -DCHECK=3
#              enables all tests, while -DCHECK=0 disables them.
#              Helps when debugging
# -DTRACK      Keeps track of variable names.
#              Enables more useful error messages
# for SSE2: -msse2 -mfpmath=sse
# 
# This must also specify one or more file formats
# -DPDBF  PDB format (need to include pdb_format.cxx)
# -DNCDF  NetCDF format (nc_format.cxx)

# PETSc config variables need to be first, else they may clobber other
# options (e.g. CXX, CXXFLAGS)
PETSC_DIR ?= 
PETSC_ARCH ?= 

SLEPC_DIR ?= 
SLEPC_ARCH ?= 


# These lines can be replaced in "make install" to point to install directories
# They are used in the CXXFLAGS variable below rather than hard-coding the directories
BOUT_INCLUDE_PATH=$(BOUT_TOP)/include
BOUT_LIB_PATH=$(BOUT_TOP)/lib
BOUT_CONFIG_FILE=$(BOUT_TOP)/make.config

prefix = /usr
exec_prefix = /usr
datarootdir = /usr/share

# This path to the locale (.mo) files is hard-wired into bout++.cxx at compile time
BOUT_LOCALE_PATH=${datarootdir}/locale

# Created this variable so that a user won't overwrite the CXXFLAGS variable
# on the command line, just add to this one
BOUT_FLAGS = $(CXXFLAGS) -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING="\"4.3.2\"" -DBOUT_VERSION_DOUBLE=4.32  -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=$(BOUT_LOCALE_PATH)   
#Use := here to force a "static" evaluation of the current state of BOUT_FLAGS to
#avoid infinite recursion that would arise if BOUT_FLAGS appeared on both sides of =
BOUT_FLAGS := $(BOUT_FLAGS) -DBOUT_FLAGS_STRING="$(BOUT_FLAGS)"

# Specify the MPI C++ compiler in CXX

CXX		= mpic++
CC      = $(CXX)

AR		= ar
ARFLAGS = cruU
RANLIB	= ranlib
MKDIR	= /usr/bin/mkdir -p

####################################################################
# Do not need to alter anything below
####################################################################

LD       = $(CXX)
LDFLAGS  = -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 
LIBS     = -ldl -lm  
CPPFLAGS = 

####################################################################
# Extra (optional) source files, includes and libs
# NOTE: EXTRA_SRC must include a solver (solver.cxx or ida_solver.cxx)
#       and a file format (nc_format.cxx or pdb_format.cxx)
####################################################################

EXTRA_INCS	  = $(CPPFLAGS)  -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc     
EXTRA_LIBS	  = $(LIBS)  -lfftw3 -lnetcdf_c++4 -lnetcdf  -lhdf5_hl -lhdf5  -lhdf5_hl -lsz -lz -ldl -lm -L/usr/lib64/openmpi/lib -lpetsc   -lsundials_ida -lsundials_nvecparallel   -lsundials_cvode -lsundials_nvecparallel   -lsundials_arkode -lsundials_nvecparallel  -L$(BOUT_LIB_PATH) -lpvode -lpvpre  

PRECON_SOURCE = 

BOUT_VERSION  = 4.3.2

####################################################################
# These are used for compiling physics modules using BOUT++ library
####################################################################

# Files that are needed by configure and should be dependencies for 'all'

OBJ    = $(SOURCEC:%.cxx=%.o)
ifndef RELEASED
# If this is part of an packaged and installed installation, the user cannot
# write these files, so they shouldn't be changed. Thus only set this, in
# the non installed case.
LIB    = $(BOUT_LIB_PATH)/libbout++.a
LIB_SO = $(BOUT_LIB_PATH)/libbout++.so
endif

MPARK_VARIANT_INCLUDE_PATH=
BOUT_INCLUDE = -I$(BOUT_INCLUDE_PATH) $(CXXINCLUDE) $(EXTRA_INCS) 
BOUT_LIBS    = -lm -L$(BOUT_LIB_PATH) -lbout++ $(EXTRA_LIBS)

CHANGED = $(shell find -f $(BOUT_TOP)/include $(BOUT_TOP)/src -type f \( -name \*.cxx -or -name \*.h \) -newer $(LIB) -print 2> /dev/null)

# This will set a default if no TARGET is provided
TARGET				?= $(SOURCEC:%.cxx=%)

####################################################################
# Definining stuff for recursive make
####################################################################

# Phony targets since they are directory names
.PHONY: $(DIRS) lib install libfast runtest manual sphinx doxygen

ifneq ("$(TARGET)","libfast")
all: $(BOUT_CONFIG_FILE) $(DIRS) $(TARGET)
else
all: $(BOUT_TOP)/config.status $(BOUT_CONFIG_FILE) $(DIRS)
endif
libfast: $(BOUT_CONFIG_FILE) $(DIRS)

####################################################################
# Recursively run make through subdirs
####################################################################

ifeq ("$(TARGET)" , "lib")
$(DIRS):
# make $@ slowly using the old method where parallel builds can cause
# race conditions that 
	@$(MAKE) -s --no-print-directory TARGET=lib -C $@ all
else
ifeq ("$(TARGET)","libfast")
$(DIRS):
# make $@ using the libfast method, where all .o files
# are only created in the end
	@$(MAKE) -s --no-print-directory TARGET=$(TARGET) -C $@ $(TARGET)
else
MODULE_DIR?=$(shell pwd)
$(DIRS):
# MODULE_DIR: pass the module directory, where the libraries should be
# created.
# SUB_NAME is used for creating a library with the expected name.
# first a potential trailing slash is removed, and after that the
# directory name is extracted. This allows to e.g. specify a directory
# as fuu/bar/ and still get an archive named bar.a
	@$(MAKE) -s --no-print-directory MODULE_DIR=$(MODULE_DIR) SUB_NAME=$(shell basename $@) TARGET=sub -C $@
endif
endif

# Create 'lib' and 'include' incase they don't exist
$(BOUT_TOP)/include $(BOUT_TOP)/lib:
	$(MKDIR) $@

####################################################################
# Install header files and libraries
####################################################################

INSTALL = /usr/bin/install -c
INSTALL_PROGRAM = ${INSTALL}
INSTALL_DATA = ${INSTALL} -m 644

INSTALL_INCLUDE_PATH = $(DESTDIR)/usr/include/openmpi-x86_64/bout++/

# A list of relative paths e.g. "fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo"
MO_FILES = $(shell cd locale; ls */LC_MESSAGES/libbout.mo)

install: libfast
	$(PRE_INSTALL)     # Pre-install commands follow.

	$(NORMAL_INSTALL)  # Normal commands follow.
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/{,pvode,bout/sys,bout/invert}
	$(MKDIR) $(DESTDIR)/{/usr/lib64/openmpi/lib,/usr/lib64/openmpi/bin,/usr/share/bout++/idllib}
	$(MKDIR) $(DESTDIR)//usr/share/bout++/pylib/{boutdata,boututils}
	$(INSTALL_DATA) include/*.hxx $(INSTALL_INCLUDE_PATH)
ifeq ("", "yes")
	$(MKDIR) $(INSTALL_INCLUDE_PATH)/mpark
	$(INSTALL_DATA) $(MPARK_VARIANT_INCLUDE_PATH)/mpark/*.hpp $(INSTALL_INCLUDE_PATH)/mpark
endif
	$(INSTALL_DATA) include/pvode/*.h $(INSTALL_INCLUDE_PATH)/pvode/
	$(INSTALL_DATA) include/bout/*.hxx $(INSTALL_INCLUDE_PATH)/bout/
	$(INSTALL_DATA) include/bout/sys/*.hxx $(INSTALL_INCLUDE_PATH)/bout/sys/
	$(INSTALL_DATA) include/bout/invert/*.hxx $(INSTALL_INCLUDE_PATH)/bout/invert/
	$(INSTALL_DATA) lib/libbout++.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_DATA) lib/libpvode.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_DATA) lib/libpvpre.a $(DESTDIR)/usr/lib64/openmpi/lib
	$(INSTALL_PROGRAM)  bin/bout-config $(DESTDIR)/usr/lib64/openmpi/bin
	$(INSTALL_PROGRAM)  bin/bout-log-color $(DESTDIR)/usr/lib64/openmpi/bin
	$(INSTALL_DATA)  tools/idllib/*.pro $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/idllib/README $(DESTDIR)/usr/share/bout++/idllib/
	$(INSTALL_DATA)  tools/pylib/boutdata/*.py $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(INSTALL_DATA)  tools/pylib/boututils/*.py $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(INSTALL_DATA)  make.config $(INSTALL_INCLUDE_PATH)
	for mo in $(MO_FILES); do $(MKDIR) $(DESTDIR)${datarootdir}/locale/`dirname $$mo`; $(INSTALL_DATA) locale/$$mo $(DESTDIR)${datarootdir}/locale/$$mo; done
	$(POST_INSTALL)    # Post-install commands follow.

	@# Modify paths in the bout-config script 
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config 
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
endif

	@# Modify paths in the make.config file
	sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" $(INSTALL_INCLUDE_PATH)/make.config
	sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" $(INSTALL_INCLUDE_PATH)/make.config
ifeq ("", "yes")
	sed -i "s|^MPARK_VARIANT_INCLUDE_PATH=.*|MPARK_VARIANT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" $(INSTALL_INCLUDE_PATH)/make.config
endif

#	Set the make.config as released, so the library isn't rebuild. This way the .a file doesn't need to be preserved/installed
	sed -i '26 i RELEASED                 = yes' $(INSTALL_INCLUDE_PATH)/make.config

uninstall:
	$(PRE_UNINSTALL)     # Pre-uninstall commands follow.

	$(NORMAL_UNINSTALL)  # Normal commands follow.
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boututils/
	$(RM) -r $(DESTDIR)/usr/share/bout++/pylib/boutdata/
	$(RM) -r $(DESTDIR)/usr/share/bout++/idllib/
	$(RM) $(DESTDIR)/usr/lib64/openmpi/bin/bout-config
	$(RM) $(DESTDIR)/usr/lib64/openmpi/bin/bout-log-color
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libbout++.a
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libpvode.a
	$(RM) $(DESTDIR)/usr/lib64/openmpi/lib/libpvpre.a
	$(RM) -r  $(DESTDIR)/usr/include/openmpi-x86_64/bout++/
	$(RM) $(DESTDIR)${datarootdir}/locale/*/LC_MESSAGES/libbout.mo

	$(POST_UNINSTALL)    # Post-uninstall commands follow.

####################################################################
# Builds the library with $(OBJ) which is defined from the SOURCEC variable
####################################################################

# Rules for downloading submodules
include $(BOUT_TOP)/makefile.submodules

ifeq ("$(TARGET)", "libfast")
libfast: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(OBJ) $(DIRS)
endif

ifeq ("$(TARGET)", "lib")
lib: makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to libbout++.a"
	@$(AR) $(ARFLAGS) $(LIB) $(OBJ)
	@$(RANLIB) $(LIB)
endif
endif


ifeq ("$(TARGET)", "sub")
LIB=$(MODULE_DIR)/$(SUB_NAME).a
sub:$(LIB)

$(LIB): makefile $(BOUT_CONFIG_FILE) $(BOUT_TOP)/include $(BOUT_TOP)/lib $(OBJ)
ifneq ("$(OBJ)foo", "foo")
	@echo "  Adding $(OBJ) to $(LIB)"
	@LIBT=$(LIB).$$$$.a && \
		$(AR) $(ARFLAGS) $${LIBT} $(OBJ) && \
		$(RANLIB) $${LIBT} && \
		mv $${LIBT} $(LIB)
endif
endif

runtest:
	./runtest


ifneq ("$(TARGET)", "sub")
ifneq ("$(TARGET)", "libfast")
ifneq ("$(TARGET)", "lib")
ifneq ("$(TARGET)", "runtest")

####################################################################
# Make libbout++.a if it doesn't exist with the checklib target
####################################################################
libbout++.a:
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
 
####################################################################
# Make the target (e.g. gas_compress)
####################################################################
# first we remove a trailing slash, if present. Note that currently we
# dont support several trailing slashes, as in fuu/bar/// 
DIRS_=$(DIRS:%/=%)
# then we extract the directory name, in case it is a longer path
# We are not in a recipe, so # needs to be escaped
# $$ is an escaped $
DIRS__=$(shell for d in $(DIRS_) ; do basename $$d;done)
# now we can generate a list of libraries
SUB_LIBS=$(DIRS__:%=%.a)
$(SUB_LIBS):$(DIRS__)

$(SOURCEC): checklib
$(SOURCEC:%.cxx=%.o): $(LIB)
$(TARGET): | $(DIRS)
$(TARGET): makefile $(BOUT_CONFIG_FILE) $(OBJ) $(SUB_LIBS)
	@echo "  Linking" $(TARGET)
	@$(LD) $(LDFLAGS) -o $(TARGET) $(OBJ) $(SUB_LIBS) $(BOUT_LIBS)

checklib:
ifneq ("$(CHANGED)foo", "foo")
	@echo "Rebuilding out-of-date bout++ library"
	@$(MAKE) --no-print-directory -C $(BOUT_TOP)
endif

endif
endif
endif
endif

# Ignore missing requirement files
-include .*.mk

# If it is a libfast target, track changes to rebuild library if needed
#
# Further track dependencies using gcc's -M feature:
# -MF  write the generated dependency rule to a file
# -MG  assume missing headers will be generated and don't stop with an error
# -MM  generate dependency rule for prerequisite, skipping system headers
# -MP  add phony target for each header to prevent errors when header is missing
# -MT  add a target to the generated dependency
# Ignore failure, in case some compiler does not support this
%.o: $(BOUT_CONFIG_FILE) %.cxx
	@echo "  Compiling " $(@:.o=.cxx)
	@$(CXX) $(BOUT_INCLUDE) $(BOUT_FLAGS) -c $(@:.o=.cxx) -o $@
ifeq ("$(TARGET)","libfast")
	test "$@" = "bout++.o" || touch $(BOUT_TOP)/lib/.last.o.file
endif

####################################################################
# Clean target. Pretty self explanatory.
# NOTE: See that double colon (::) below? That's signifies a rule that can be added to later
# See:
# http://owen.sj.ca.us/~rk/howto/slides/make/slides/makecolon.html
####################################################################

clean::
	-@$(RM) -rf $(OBJ) $(DEPS) $(TARGET)
	@for pp in $(DIRS); do echo "  " $$pp cleaned; $(MAKE) --no-print-directory -C $$pp clean; done
	@$(RM) -f $(SUB_LIBS)
	-@$(RM) .*.mk
	@test -f make.config && ( find src | grep '\.o$$' && echo "WARNING: Some object files remain - which might cause issues. Clean with $(MAKE) clean-remove-object-files" ) || exit 0

clean-remove-object-files:
	find src|grep '\.o$$' | xargs rm


distclean:: clean clean-tests
	@echo include cleaned
# Removing the externalpackage installation. When we have more packages, need a better way
	@$(RM) -rf $(BOUT_TOP)/include/pvode
	@echo lib cleaned
	@$(RM) -rf $(BOUT_TOP)/lib/*
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/lib/*.a
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/source/obj/*.o
	-@$(RM) $(BOUT_TOP)/externalpackages/PVODE/precon/obj/*.o
	-@$(RM) -rf $(BOUT_TOP)/autom4te.cache make.config
	@echo externalpackages cleaned
	@touch $(BOUT_TOP)/configure
	@echo autom4te.cache cleaned

clean-tests: clean-unit-tests clean-integrated-tests clean-mms-tests

clean-unit-tests:
	@echo "   tests/unit cleaned"
	@$(MAKE) --no-print-directory -C tests/unit clean

clean-integrated-tests:
	@echo "   tests/integrated cleaned"
	@$(MAKE) --no-print-directory -C tests/integrated clean

clean-mms-tests:
	@echo "   tests/MMS cleaned"
	@$(MAKE) --no-print-directory -C tests/MMS clean

####################################################################
# Documentation
####################################################################

MANUAL_DIR=$(BOUT_TOP)/manual

doxygen:
	$(MAKE) -C $(MANUAL_DIR) doxygen

breathe-autogen:
	$(MAKE) -C $(MANUAL_DIR) breathe_autogen

sphinx-docs-html:
	$(MAKE) -C $(MANUAL_DIR) sphinx-html

sphinx-docs-latex:
	$(MAKE) -C $(MANUAL_DIR) sphinx-pdf

manual:
	$(MAKE) -C $(MANUAL_DIR)

manual-html:
	$(MAKE) -C $(MANUAL_DIR) html

manual-pdf:
	$(MAKE) -C $(MANUAL_DIR) pdf

python: libfast
	$(MAKE) -C tools/pylib python3

python2: libfast
	$(MAKE) -C tools/pylib python2

python-all:python python2

######################################################################
# Code coverage
######################################################################

GCOV = 
LCOV = 
GENHTML = 
abs_builddir = /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi


# Code coverage
#
# Optional:
#  - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting.
#    Multiple directories may be specified, separated by whitespace.
#    (Default: $(top_builddir))
#  - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated
#    by lcov for code coverage. (Default:
#    bout-coverage.info)
#  - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage
#    reports to be created. (Default:
#    bout-coverage)
#  - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage,
#    set to 0 to disable it and leave empty to stay with the default.
#    (Default: empty)
#  - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov
#    instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov
#    instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
#  - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov
#  - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the
#    collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
#  - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering
#    lcov instance. (Default: empty)
#  - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov
#    instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
#  - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the
#    genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
#  - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml
#    instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
#  - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore
#
# The generated report will be titled using the $(PACKAGE_NAME) and
# $(PACKAGE_VERSION). In order to add the current git hash to the title,
# use the git-version-gen script, available online.

# Optional variables
CODE_COVERAGE_DIRECTORY ?= $(abs_builddir)
CODE_COVERAGE_OUTPUT_FILE ?= bout-coverage.info
CODE_COVERAGE_OUTPUT_DIRECTORY ?= bout-coverage
CODE_COVERAGE_BRANCH_COVERAGE ?=
CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)"
CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?=
CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\
$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
CODE_COVERAGE_IGNORE_PATTERN ?= "*test*/*"

# Use recursive makes in order to ignore errors during check
check-code-coverage:
	@echo "Need to reconfigure with --enable-code-coverage"


# Capture code coverage data
code-coverage-capture: code-coverage-capture-hook
	@echo "Need to reconfigure with --enable-code-coverage"


# Hook rule executed before code-coverage-capture, overridable by the user
code-coverage-capture-hook:



GITIGNOREFILES ?=
GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)

.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean

+ make -j2 shared python
  Compiling  field.cxx
  Compiling  nc_format.cxx
  Compiling  ncxx4.cxx
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from field.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from ncxx4.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ncxx4.hxx:48,
                 from ncxx4.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from ncxx4.hxx:51,
                 from ncxx4.cxx:23:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  field2d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field2d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field2d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pnetcdf.cxx
  Compiling  h5_format.cxx
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from h5_format.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/globals.hxx:30,
                 from h5_format.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field3d.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field3d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from field3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from field3d.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  datafile.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from datafile.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from datafile.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldperp.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from fieldperp.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from fieldperp.cxx:31:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from fieldperp.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_data.cxx
  Compiling  dataformat.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field_data.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from field_data.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from dataformat.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from dataformat.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  formatfactory.cxx
  Compiling  fieldgroup.cxx
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from formatfactory.cxx:15:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from formatfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from impls/netcdf4/ncxx4.hxx:51,
                 from formatfactory.cxx:8:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
  Compiling  cyclic.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/fieldgroup.hxx:5,
                 from fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field_data.hxx:37,
                 from ../../include/bout/fieldgroup.hxx:4,
                 from fieldgroup.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/field2d.hxx:34,
                 from ../../../../../include/derivs.hxx:32,
                 from cyclic.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from field_factory.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from field_factory.cxx:22:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_parderiv.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from invert_parderiv.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parderiv_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from parderiv_factory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from parderiv_factory.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from parderiv_factory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fieldgenerators.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from fieldgenerators.hxx:11,
                 from fieldgenerators.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from fieldgenerators.hxx:10,
                 from fieldgenerators.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_tri.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_tri.hxx:32,
                 from serial_tri.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_tri.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  initialprofiles.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from initialprofiles.cxx:39:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from initialprofiles.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  serial_band.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from serial_band.hxx:32,
                 from serial_band.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from serial_band.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vecops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from vecops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from vecops.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pdd.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/lapack_routines.hxx:26,
                 from pdd.cxx:36:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from pdd.cxx:33:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  spt.cxx
  Compiling  vector2d.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../../include/bout/mesh.hxx:46,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from spt.cxx:35:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../../include/bout/mesh.hxx:46,
                 from spt.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/vector2d.hxx:40,
                 from vector2d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector2d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  vector3d.cxx
  Compiling  petsc_laplace.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/vector3d.hxx:37,
                 from vector3d.cxx:33:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from vector3d.cxx:31:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from petsc_laplace.hxx:66,
                 from petsc_laplace.cxx:28:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from petsc_laplace.hxx:63,
                 from petsc_laplace.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  where.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from where.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from where.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mumps_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from mumps_laplace.hxx:31,
                 from mumps_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  globalfield.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/globalfield.hxx:12,
                 from globalfield.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cyclic_laplace.cxx
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from cyclic_laplace.cxx:38:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/dataformat.hxx:40,
                 from ../../../../../include/datafile.hxx:20,
                 from ../../../../../include/globals.hxx:30,
                 from cyclic_laplace.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  generated_fieldops.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from generated_fieldops.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from generated_fieldops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shoot_laplace.cxx
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/field.hxx:41,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../../include/field.hxx:34,
                 from ../../../../../include/fieldperp.hxx:31,
                 from ../../../../../include/invert_laplace.hxx:41,
                 from shoot_laplace.hxx:33,
                 from shoot_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert_laplace.cxx
  Compiling  multigrid_laplace.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from invert_laplace.cxx:34:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from invert_laplace.cxx:34:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_laplace.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_laplace.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
invert_laplace.cxx: In constructor 'Laplacian::Laplacian(Options*, CELL_LOC, Mesh*)':
invert_laplace.cxx:100:16: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                ^~~~~~~~
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx:100:30: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  100 |     Laplacian::setFlags(flags);
      |                              ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const FieldPerp&, FieldPerp&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:770:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  770 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'int invert_laplace(const Field3D&, Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:800:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  800 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
invert_laplace.cxx: In function 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)':
invert_laplace.cxx:831:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  831 |   lap->setFlags(flags);
      |                      ^
In file included from invert_laplace.cxx:36:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Compiling  multigrid_alg.cxx
  Compiling  laplacefactory.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_alg.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_alg.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from laplacefactory.hxx:7,
                 from laplacefactory.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from laplacefactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  multigrid_solver.cxx
  Compiling  naulin_laplace.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from multigrid_laplace.hxx:38,
                 from multigrid_solver.cxx:30:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from multigrid_laplace.hxx:34,
                 from multigrid_solver.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../../include/bout/mesh.hxx:49,
                 from naulin_laplace.cxx:140:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../../include/boutexception.hxx:7,
                 from naulin_laplace.cxx:139:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutmesh.cxx
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutmesh.hxx:5,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../../include/bout/deriv_store.hxx:37,
                 from ../../../../include/bout/mesh.hxx:49,
                 from boutmesh.hxx:7,
                 from boutmesh.cxx:36:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutmesh.hxx:5,
                 from boutmesh.cxx:36:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexy.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscis.h:7,
                 from /usr/include/openmpi-x86_64/petsc/petscvec.h:9,
                 from /usr/include/openmpi-x86_64/petsc/petscmat.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscpc.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from ../../../include/bout/invert/laplacexy.hxx:64,
                 from laplacexy.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscis.h:7,
                 from /usr/include/openmpi-x86_64/petsc/petscvec.h:9,
                 from /usr/include/openmpi-x86_64/petsc/petscmat.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscpc.h:6,
                 from /usr/include/openmpi-x86_64/petsc/petscksp.h:6,
                 from laplacexy.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-cyclic.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-cyclic.hxx:2,
                 from laplacexz-cyclic.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  shiftedmetric.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from shiftedmetric.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from shiftedmetric.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz-petsc.cxx
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../include/utils.hxx:38,
                 from ../../../../../include/options.hxx:45,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../include/multiostream.hxx:4,
                 from ../../../../../include/output.hxx:32,
                 from ../../../../../include/options.hxx:44,
                 from ../../../../../include/bout/invert/laplacexz.hxx:34,
                 from laplacexz-petsc.hxx:12,
                 from laplacexz-petsc.cxx:11:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fci.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/bout/paralleltransform.hxx:10,
                 from fci.hxx:29,
                 from fci.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  laplacexz.cxx
  Compiling  identity.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/invert/laplacexz.hxx:34,
                 from impls/cyclic/laplacexz-cyclic.hxx:2,
                 from laplacexz.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from identity.cxx:9:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from identity.cxx:9:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromoptions.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromoptions.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fft_fftw.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from fft_fftw.cxx:29:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from fft_fftw.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gridfromfile.cxx
  Compiling  lapack_routines.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/bout/griddata.hxx:31,
                 from gridfromfile.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from lapack_routines.cxx:41:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from lapack_routines.cxx:38:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  physicsmodel.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from ../../include/bout.hxx:39,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/boutcomm.hxx:33,
                 from ../../include/bout.hxx:39,
                 from ../../include/bout/physicsmodel.hxx:40,
                 from physicsmodel.cxx:32:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bilinear.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from bilinear.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from bilinear.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  smoothing.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from smoothing.cxx:35:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from smoothing.cxx:35:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  hermite_spline.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sourcex.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sourcex.cxx:8:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from sourcex.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  gyro_average.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from gyro_average.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from gyro_average.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  monotonic_hermite_spline.cxx
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, BoutReal, int)':
gyro_average.cxx:170:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  170 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field2D&, int)':
gyro_average.cxx:187:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  187 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade0(const Field3D&, const Field3D&, int)':
gyro_average.cxx:194:37: warning: 'Field3D gyroPade0(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  194 |   return gyroPade0(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:175:9: note: declared here
  175 | Field3D gyroPade0(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, BoutReal, int)':
gyro_average.cxx:209:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  209 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field2D&, int)':
gyro_average.cxx:226:22: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
  226 |   lap->setFlags(flags);
      |                      ^
In file included from ../../include/gyro_average.hxx:36,
                 from gyro_average.cxx:34:
../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade1(const Field3D&, const Field3D&, int)':
gyro_average.cxx:232:37: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  232 |   return gyroPade1(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field2D gyroPade1(const Field2D&, const Field2D&, int)':
gyro_average.cxx:238:34: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  238 |   tmp = gyroPade1(tmp, rho, flags);
      |                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, BoutReal, int)':
gyro_average.cxx:243:53: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:243:66: warning: 'Field3D gyroPade1(const Field3D&, BoutReal, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  243 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:197:9: note: declared here
  197 | Field3D gyroPade1(const Field3D& f, BoutReal rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field2D&, int)':
gyro_average.cxx:251:53: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                     ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx:251:66: warning: 'Field3D gyroPade1(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  251 |   Field3D result = gyroPade1(gyroPade1(f, rho, flags), rho, flags);
      |                                                                  ^
gyro_average.cxx:214:9: note: declared here
  214 | Field3D gyroPade1(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
gyro_average.cxx: In function 'Field3D gyroPade2(const Field3D&, const Field3D&, int)':
gyro_average.cxx:260:37: warning: 'Field3D gyroPade2(const Field3D&, const Field2D&, int)' is deprecated: Please use version with separate inner_boundary_flags and outer_boundary_flags [-Wdeprecated-declarations]
  260 |   return gyroPade2(f, DC(rho), flags);
      |                                     ^
gyro_average.cxx:250:9: note: declared here
  250 | Field3D gyroPade2(const Field3D& f, const Field2D& rho, int flags) {
      |         ^~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from monotonic_hermite_spline.cxx:24:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/globals.hxx:30,
                 from monotonic_hermite_spline.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  snb.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field3d.hxx:30,
                 from ../../include/invert_parderiv.hxx:34,
                 from ../../include/bout/snb.hxx:1,
                 from snb.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  lagrange_4pt.cxx
  Compiling  arkode.cxx
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/bout/scorepwrapper.hxx:5,
                 from ../../../include/bout/deriv_store.hxx:37,
                 from ../../../include/bout/mesh.hxx:49,
                 from lagrange_4pt.cxx:23:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/bout/mesh.hxx:46,
                 from lagrange_4pt.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from arkode.hxx:35,
                 from arkode.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation_factory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/interpolation.hxx:31,
                 from ../../../include/interpolation_factory.hxx:4,
                 from interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  pvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from pvode.hxx:34,
                 from pvode.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  difops.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from difops.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from difops.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cvode.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from cvode.hxx:34,
                 from cvode.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  interpolation.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from interpolation.cxx:27:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from interpolation.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  ida.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from ida.hxx:35,
                 from ida.cxx:30:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from ida.hxx:35,
                 from ida.cxx:30:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from mesh.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  petsc.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field2d.hxx:34,
                 from petsc.hxx:36,
                 from petsc.cxx:27:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from /usr/include/openmpi-x86_64/petsc/petscsystypes.h:218,
                 from /usr/include/openmpi-x86_64/petsc/petscsys.h:40,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
petsc.cxx: In function 'PetscErrorCode PetscMonitor(TS, PetscInt, PetscReal, Vec, void*)':
petsc.cxx:859:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |     ^~
In file included from /usr/include/openmpi-x86_64/petsc/petscsys.h:1362,
                 from /usr/include/openmpi-x86_64/petsc/petscbag.h:4,
                 from /usr/include/openmpi-x86_64/petsc/petsc.h:5,
                 from petsc.hxx:34,
                 from petsc.cxx:27:
/usr/include/openmpi-x86_64/petsc/petscerror.h:464:32: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  464 | #define CHKERRQ(ierr)          do {PetscErrorCode ierr__ = (ierr); if (PetscUnlikely(ierr__)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,ierr__,PETSC_ERROR_REPEAT," ");} while (0)
      |                                ^~
petsc.cxx:859:79: note: in expansion of macro 'CHKERRQ'
  859 |     if (s->interpolate) ierr = TSInterpolate(ts,s->next_output,interpolatedX);CHKERRQ(ierr);
      |                                                                               ^~~~~~~
  Compiling  snes.cxx
  Compiling  boundary_standard.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from snes.hxx:35,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from snes.hxx:38,
                 from snes.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from snes.hxx:35,
                 from snes.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_standard.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_standard.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  imex-bdf2.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from imex-bdf2.hxx:42,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from imex-bdf2.hxx:45,
                 from imex-bdf2.cxx:4:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from imex-bdf2.hxx:42,
                 from imex-bdf2.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from boundary_factory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  power.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from power.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from power.hxx:33,
                 from power.cxx:3:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from power.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boundary_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from boundary_region.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from boundary_region.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  slepc.cxx
  Compiling  karniadakis.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from karniadakis.hxx:38,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from karniadakis.hxx:41,
                 from karniadakis.cxx:39:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from karniadakis.hxx:38,
                 from karniadakis.cxx:39:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  meshfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from meshfactory.hxx:7,
                 from meshfactory.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4.cxx
  Compiling  surfaceiter.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk4.hxx:33,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk4.hxx:36,
                 from rk4.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk4.hxx:33,
                 from rk4.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from ../../include/bout/surfaceiter.hxx:10,
                 from surfaceiter.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from coordinates.cxx:9:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/../boutexception.hxx:7,
                 from ../../include/bout/assert.hxx:20,
                 from coordinates.cxx:7:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  euler.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from euler.hxx:33,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from euler.hxx:36,
                 from euler.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from euler.hxx:33,
                 from euler.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk3-ssp.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk3-ssp.hxx:39,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rk3-ssp.hxx:42,
                 from rk3-ssp.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rk3-ssp.hxx:39,
                 from rk3-ssp.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf45.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf45.hxx:7,
                 from rkf45.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  index_derivs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/index_derivs.hxx:37,
                 from index_derivs.cxx:24:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from ../../include/bout/index_derivs.hxx:33,
                 from index_derivs.cxx:24:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  cashkarp.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from cashkarp.hxx:7,
                 from cashkarp.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rk4simple.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rk4simple.hxx:7,
                 from rk4simple.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkf34.cxx
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../../../include/utils.hxx:38,
                 from ../../../../../../include/options.hxx:45,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
../../../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../../../include/multiostream.hxx:4,
                 from ../../../../../../include/output.hxx:32,
                 from ../../../../../../include/options.hxx:44,
                 from ../../../../../../include/bout/rkscheme.hxx:39,
                 from rkf34.hxx:7,
                 from rkf34.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkgeneric.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rkgeneric.hxx:31,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from rkgeneric.hxx:34,
                 from rkgeneric.cxx:2:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from rkgeneric.hxx:31,
                 from rkgeneric.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkscheme.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkscheme.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  rkschemefactory.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../../include/multiostream.hxx:4,
                 from ../../../../include/output.hxx:32,
                 from ../../../../include/options.hxx:44,
                 from ../../../../include/bout/rkscheme.hxx:39,
                 from rkschemefactory.hxx:7,
                 from rkschemefactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  split-rk.cxx
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/utils.hxx:38,
                 from ../../../../include/options.hxx:45,
                 from ../../../../include/bout/solver.hxx:42,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../../../include/boutexception.hxx:7,
                 from ../../../../include/bout/solver.hxx:40,
                 from split-rk.hxx:36,
                 from split-rk.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver.cxx:23:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/solver.hxx:40,
                 from solver.cxx:23:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solverfactory.cxx
In file included from impls/pvode/pvode.hxx:37,
                 from solverfactory.cxx:11:
../../include/pvode/nvector.h:93: warning: "PVEC_REAL_MPI_TYPE" redefined
   93 | #define PVEC_REAL_MPI_TYPE MPI_DOUBLE
      | 
In file included from /usr/include/openmpi-x86_64/nvector/nvector_parallel.h:44,
                 from impls/arkode/arkode.hxx:47,
                 from solverfactory.cxx:3:
/usr/include/openmpi-x86_64/sundials/sundials_mpi_types.h:38: note: this is the location of the previous definition
   38 | #define PVEC_REAL_MPI_TYPE    MPI_SUNREALTYPE
      | 
  Compiling  parallel_boundary_region.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from ../../include/bout/solverfactory.hxx:8,
                 from solverfactory.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from ../../include/bout/generic_factory.hxx:7,
                 from ../../include/bout/solverfactory.hxx:7,
                 from solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  parallel_boundary_op.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from parallel_boundary_op.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../include/bout/mesh.hxx:46,
                 from parallel_boundary_op.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  fv_ops.cxx
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/bout/../msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/../field.hxx:41,
                 from ../../include/bout/../field3d.hxx:30,
                 from ../../include/bout/fv_ops.hxx:9,
                 from fv_ops.cxx:2:
../../include/bout/../msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/bout/../dataformat.hxx:40,
                 from ../../include/bout/../datafile.hxx:20,
                 from ../../include/bout/../globals.hxx:30,
                 from ../../include/bout/fv_ops.hxx:8,
                 from fv_ops.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_ini.cxx
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from options_ini.cxx:52:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../../include/dcomplex.hxx:35,
                 from ../../../include/utils.hxx:33,
                 from options_ini.cxx:52:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options_netcdf.cxx
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/utils.hxx:38,
                 from ../../../include/options.hxx:45,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../../include/multiostream.hxx:4,
                 from ../../../include/output.hxx:32,
                 from ../../../include/options.hxx:44,
                 from ../../../include/options_netcdf.hxx:44,
                 from options_netcdf.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout_types.cxx
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from options_netcdf.cxx:7:
/usr/include/openmpi-x86_64/ncGroup.h: At global scope:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from bout_types.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from bout_types.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  boutexception.cxx
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from boutexception.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  derivs.cxx
  Compiling  msg_stack.cxx
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from msg_stack.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/msg_stack.hxx:35,
                 from msg_stack.cxx:28:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/derivs.hxx:32,
                 from derivs.cxx:42:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/dataformat.hxx:40,
                 from ../../include/datafile.hxx:20,
                 from ../../include/globals.hxx:30,
                 from derivs.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/field_factory.hxx:32,
                 from options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/boutexception.hxx:7,
                 from options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  output.cxx
  Compiling  utils.cxx
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from output.cxx:30:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from output.cxx:29:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from utils.cxx:26:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/istream:38,
                 from /usr/include/c++/11/sstream:38,
                 from /usr/include/c++/11/complex:45,
                 from ../../include/dcomplex.hxx:35,
                 from ../../include/utils.hxx:33,
                 from utils.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  optionsreader.cxx
  Compiling  boutcomm.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/stdexcept:38,
                 from /usr/include/c++/11/system_error:41,
                 from /usr/include/c++/11/bits/ios_base.h:46,
                 from /usr/include/c++/11/streambuf:41,
                 from ../../include/multiostream.hxx:4,
                 from ../../include/output.hxx:32,
                 from ../../include/options.hxx:44,
                 from ../../include/optionsreader.hxx:37,
                 from optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  timer.cxx
  Compiling  range.cxx
  Compiling  petsclib.cxx
  Compiling  expressionparser.cxx
  Compiling  slepclib.cxx
  Compiling  type_name.cxx
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from expressionparser.cxx:28:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from ../../include/bout/sys/expressionparser.hxx:33,
                 from expressionparser.cxx:25:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../include/field.hxx:34,
                 from ../../include/field2d.hxx:34,
                 from type_name.cxx:3:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  bout++.cxx
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../include/field.hxx:41,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../include/field.hxx:34,
                 from ../include/field2d.hxx:34,
                 from ../include/boundary_op.hxx:9,
                 from ../include/boundary_factory.hxx:7,
                 from bout++.cxx:41:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
Recreating libbout++.a
make -C tools/pylib python3
Creating libbout++.so
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib'
PY=python3 make -C _boutcore_build pseudoinstall
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build'
  Generating boutcore.pyx
  Generating setup.py
  Generating helper.cxx
  Generating helper.h
  Generating resolve_enum.pxd
yes - <int>deflt
yes - <int>centre
yes - <int>xlow
yes - <int>ylow
yes - <int>zlow
yes - <int>vshift
yes - <int>deflt
yes - <int>u1
yes - <int>u2
yes - <int>c2
yes - <int>w2
yes - <int>w3
yes - <int>c4
yes - <int>u3
yes - <int>fft
yes - <int>split
yes - <int>s2
yes - <int>all
yes - <int>nobndry
yes - <int>nox
yes - <int>noy
yes - <int>noz
yes - <int>X
yes - <int>Y
yes - <int>Z
yes - <int>YAligned
yes - <int>YOrthogonal
yes - <int>Standard
yes - <int>Aligned
yes - <int>Standard
yes - <int>Average
yes - <int>C2L
yes - <int>L2C
yes - <int>Standard
yes - <int>StandardSecond
yes - <int>StandardFourth
yes - <int>Upwind
yes - <int>Flux
yes - <int>standard
yes - <int>simple
yes - <int>arakawa
yes - <int>ctu
yes - <int>arakawa_old
  Generating boutcpp.pxd
/usr/lib64/python3.9/distutils/extension.py:131: UserWarning: Unknown Extension options: 'language_level'
  warnings.warn(msg)
/usr/lib64/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build/boutcore.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
warning: resolve_enum.pxd:49:25: 'deflt' redeclared 
warning: resolve_enum.pxd:189:28: 'Standard' redeclared 
warning: resolve_enum.pxd:223:19: 'Standard' redeclared 
Compiling boutcore.pyx because it changed.
[1/1] Cythonizing boutcore.pyx
running build_ext
building 'boutcore' extension
creating build
creating build/temp.linux-x86_64-3.9
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c boutcore.cpp -o build/temp.linux-x86_64-3.9/boutcore.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib64/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from boutcore.cpp:902:
/usr/lib64/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from boutcore.cpp:883:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from boutcore.cpp:876:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_6DDX(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37690:96: warning: ‘Field3D DDX(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37690 |     __pyx_t_6 = DDX((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:95:34: note: declared here
   95 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDX, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_8D2DX2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:37980:98: warning: ‘Field3D D2DX2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
37980 |     __pyx_t_6 = D2DX2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:225:34: note: declared here
  225 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DX2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_10VDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38282:126: warning: ‘Field3D VDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38282 |     __pyx_t_6 = VDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:420:35: note: declared here
  420 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_12FDDX(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38584:126: warning: ‘Field3D FDDX(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38584 |     __pyx_t_6 = FDDX((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:539:35: note: declared here
  539 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDX, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_14DDY(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:38874:96: warning: ‘Field3D DDY(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
38874 |     __pyx_t_6 = DDY((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:127:34: note: declared here
  127 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDY, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_16D2DY2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39164:98: warning: ‘Field3D D2DY2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39164 |     __pyx_t_6 = D2DY2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:257:34: note: declared here
  257 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DY2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_18VDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39466:126: warning: ‘Field3D VDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39466 |     __pyx_t_6 = VDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:454:35: note: declared here
  454 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_20FDDY(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:39768:126: warning: ‘Field3D FDDY(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
39768 |     __pyx_t_6 = FDDY((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:573:35: note: declared here
  573 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDY, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_22DDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40058:96: warning: ‘Field3D DDZ(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40058 |     __pyx_t_6 = DDZ((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:159:34: note: declared here
  159 | DERIV_FUNC_REGION_ENUM_TO_STRING(DDZ, Field3D)
      |                                  ^~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_24D2DZ2(PyObject*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40348:98: warning: ‘Field3D D2DZ2(const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40348 |     __pyx_t_6 = D2DZ2((__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                  ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:289:34: note: declared here
  289 | DERIV_FUNC_REGION_ENUM_TO_STRING(D2DZ2, Field3D)
      |                                  ^~~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:46:10: note: in definition of macro ‘DERIV_FUNC_REGION_ENUM_TO_STRING’
   46 | inline T func(const T& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_26VDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40650:126: warning: ‘Field3D VDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40650 |     __pyx_t_6 = VDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:488:35: note: declared here
  488 | VDERIV_FUNC_REGION_ENUM_TO_STRING(VDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: In function ‘PyObject* __pyx_pf_8boutcore_28FDDZ(PyObject*, __pyx_obj_8boutcore_Field3D*, __pyx_obj_8boutcore_Field3D*, PyObject*, PyObject*, PyObject*)’:
boutcore.cpp:40952:126: warning: ‘Field3D FDDZ(const Field3D&, const Field3D&, CELL_LOC, const string&, REGION)’ is deprecated: Please use #func(const #T1 v, const #T2& f, CELL_LOC outloc = CELL_DEFAULT, const std::string& method = "DEFAULT", const std::string& region = "RGN_ALL") instead [-Wdeprecated-declarations]
40952 |     __pyx_t_6 = FDDZ((__pyx_v_velocity->cobj[0]), (__pyx_v_field->cobj[0]), __pyx_v_outloc_, __pyx_v_method_, __pyx_v_region_);
      |                                                                                                                              ^
In file included from boutcore.cpp:894:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:607:35: note: declared here
  607 | VDERIV_FUNC_REGION_ENUM_TO_STRING(FDDZ, Field3D, Field3D, Field3D)
      |                                   ^~~~
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/derivs.hxx:66:10: note: in definition of macro ‘VDERIV_FUNC_REGION_ENUM_TO_STRING’
   66 | inline T func(const T1& v, const T2& f, CELL_LOC outloc, const std::string& method, \
      |          ^~~~
boutcore.cpp: At global scope:
boutcore.cpp:25004:45: warning: ‘__pyx_obj_8boutcore_Vector2D* __pyx_f_8boutcore_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
25004 | static struct __pyx_obj_8boutcore_Vector2D *__pyx_f_8boutcore_v2dFromObj(Vector2D __pyx_v_i) {
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
boutcore.cpp:49221:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
49221 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_f_12resolve_enum_resolve_region(_object*)’:
boutcore.cpp:50045:10: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
50045 |   return __pyx_r;
      |          ^~~~~~~
boutcore.cpp: In function ‘__pyx_pw_8boutcore_45bracket(_object*, _object*, _object*)’:
boutcore.cpp:42619:141: warning: ‘__pyx_r’ may be used uninitialized in this function [-Wmaybe-uninitialized]
42619 |   __pyx_t_1 = ((PyObject *)__pyx_f_8boutcore_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2569, __pyx_L1_error)
      |                                                                                                                                             ^
boutcore.cpp:50732:18: note: ‘__pyx_r’ was declared here
50732 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c boutexception_helper.cxx -o build/temp.linux-x86_64-3.9/boutexception_helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
mpic++ -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.9/site-packages/numpy/core/include -I/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include -I/usr/include -I/usr/include -I/usr/include/openmpi-x86_64/petsc -I. -I/usr/include/python3.9 -c helper.cxx -o build/temp.linux-x86_64-3.9/helper.o -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -DBOUT_FLAGS_STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DHAS_PRETTY_FUNCTION -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -DSIGHANDLE -DLOGCOLOR -DBOUT_VERSION_STRING=4.3.2 -DBOUT_VERSION_DOUBLE=4.32 -DBACKTRACE -fPIC -DBOUT_HAS_FFTW -DNCDF4 -DHDF5 -DBOUT_HAS_PETSC -DBOUT_HAS_IDA -DBOUT_HAS_CVODE -DBOUT_HAS_ARKODE -DBOUT_HAS_PVODE -DBOUT_HAS_GETTEXT -DBOUT_LOCALE_PATH=/usr/share/locale
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx: In destructor ‘MsgStackItem::~MsgStackItem()’:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:15: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:41,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/msg_stack.hxx:147:34: warning: ‘bool std::uncaught_exception()’ is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field3d.hxx:30,
                 from helper.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
mpic++ -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.9/boutcore.o build/temp.linux-x86_64-3.9/boutexception_helper.o build/temp.linux-x86_64-3.9/helper.o -L/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib -L/usr/lib64 -L/usr/lib64 -L/usr/lib64/openmpi/lib -L/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib -L/usr/lib64 -lm -lbout++ -ldl -lm -lfftw3 -lnetcdf_c++4 -lnetcdf -lhdf5_hl -lhdf5 -lhdf5_hl -lsz -lz -ldl -lm -lpetsc -lsundials_ida -lsundials_nvecparallel -lsundials_cvode -lsundials_nvecparallel -lsundials_arkode -lsundials_nvecparallel -lpvode -lpvpre -o /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build/boutcore.cpython-39-x86_64-linux-gnu.so -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
cp boutcore*.so ..
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib/_boutcore_build'
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tools/pylib'
++ pwd
+ export LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ make -j2 -C manual html
make: Entering directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual'
cd doxygen && doxygen Doxyfile
warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1056 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 2149 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2171 of file 'Doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
Doxygen version used: 1.9.1
Notice: Output directory 'bout' does not exist. I have created it for you.
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Reading /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/field/gen_fieldops.py...
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Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk4/rk4.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf34/rkf34.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rkf45/rkf45.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkgeneric.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkscheme.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkscheme.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/rkschemefactory.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/slepc/slepc.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/snes/snes.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/split-rk/split-rk.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solver.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solver.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solverfactory.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/solverfactory.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/bout_types.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/bout_types.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutcomm.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutcomm.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutexception.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/boutexception.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/derivs.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/derivs.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/expressionparser.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/expressionparser.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/msg_stack.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/msg_stack.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/optionparser.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/optionparser.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.hxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_ini.hxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_netcdf.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/options_netcdf.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/optionsreader.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/optionsreader.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/output.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/output.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/petsclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/petsclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/range.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2//builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:1: warning: the name 'Base' supplied as the argument in the \file statement is not an input file
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:347: warning: no uniquely matching class member found for 
  const vector< int > NcFormat::getSize(const string &var)
Possible candidates:
  'const std::vector< int > NcFormat::getSize(const char *var) override' at line 77 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'const std::vector< int > NcFormat::getSize(const std::string &var) override' at line 78 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:558: warning: no uniquely matching class member found for 
  bool NcFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:599: warning: no uniquely matching class member found for 
  bool NcFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 100 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:677: warning: no uniquely matching class member found for 
  bool NcFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:739: warning: no uniquely matching class member found for 
  bool NcFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 105 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 106 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:841: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:882: warning: no uniquely matching class member found for 
  bool NcFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 111 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 112 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 113 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 114 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:964: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.cxx:1039: warning: no uniquely matching class member found for 
  bool NcFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool NcFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 117 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 118 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 119 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx
  'bool NcFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 120 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:295: warning: no uniquely matching class member found for 
  bool PncFormat::read(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:354: warning: no uniquely matching class member found for 
  bool PncFormat::read(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 84 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 85 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 86 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 87 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:402: warning: no uniquely matching class member found for 
  bool PncFormat::write(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:488: warning: no uniquely matching class member found for 
  bool PncFormat::write(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 89 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 90 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 91 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 92 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:524: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:556: warning: no uniquely matching class member found for 
  bool PncFormat::read_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::read_rec(int *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 96 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(int *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 97 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const char *name, int lx=1, int ly=0, int lz=0) override' at line 98 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::read_rec(BoutReal *var, const std::string &name, int lx=1, int ly=0, int lz=0) override' at line 99 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:605: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(int *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.cxx:681: warning: no uniquely matching class member found for 
  bool PncFormat::write_rec(double *var, const string &name, int lx, int ly, int lz)
Possible candidates:
  'bool PncFormat::write_rec(int *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(int *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const char *name, int lx=0, int ly=0, int lz=0) override' at line 103 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx
  'bool PncFormat::write_rec(BoutReal *var, const std::string &name, int lx=0, int ly=0, int lz=0) override' at line 104 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/pnetcdf.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:80: warning: no uniquely matching class member found for 
  BoundaryOpBase * BoundaryFactory::create(const string &name, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::create(const std::string &name, BoundaryRegionBase *region)' at line 70 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'BoundaryOpBase * BoundaryFactory::create(const char *name, BoundaryRegionBase *region)' at line 71 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:210: warning: no matching class member found for 
  BoundaryOpBase * BoundaryFactory::createFromOptions(const string &varname, BoundaryRegionBase *region)
Possible candidates:
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const std::string &varname, BoundaryRegionBase *region)'
  'BoundaryOpBase * BoundaryFactory::createFromOptions(const char *varname, BoundaryRegionBase *region)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:313: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOp *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:326: warning: no uniquely matching class member found for 
  void BoundaryFactory::add(BoundaryOpPar *bop, const string &name)
Possible candidates:
  'void BoundaryFactory::add(BoundaryOp *bop, const std::string &name)' at line 81 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOp *bop, const char *name)' at line 88 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const std::string &name)' at line 101 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx
  'void BoundaryFactory::add(BoundaryOpPar *bop, const char *name)' at line 102 of file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/boundary_factory.hxx

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/boundary_factory.cxx:339: warning: no matching class member found for 
  void BoundaryFactory::addMod(BoundaryModifier *bmod, const string &name)
Possible candidates:
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const std::string &name)'
  'void BoundaryFactory::addMod(BoundaryModifier *bmod, const char *name)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1229: warning: no matching class member found for 
  Field2D Coordinates::DDZ(const MAYBE_UNUSED(Field2D &f), CELL_LOC loc, const std::string &method, const std::string &region)
Possible candidates:
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, const std::string &method, REGION region)'
  'Field2D Coordinates::DDZ(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method, REGION region=RGN_NOBNDRY)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1244: warning: no matching class member found for 
  Field2D Coordinates::Grad_par(const Field2D &var, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Grad_par(const Field2D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Grad_par(const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Grad_par(const Field3D &var, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Grad_par(const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/coordinates.cxx:1265: warning: no matching class member found for 
  Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, MAYBE_UNUSED(CELL_LOC outloc), const std::string &method)
Possible candidates:
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field2D Coordinates::Vpar_Grad_par(const Field2D &v, const Field2D &f, CELL_LOC outloc, DIFF_METHOD method)'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT")'
  'Field3D Coordinates::Vpar_Grad_par(const Field3D &v, const Field3D &f, CELL_LOC outloc, DIFF_METHOD method)'

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/index_derivs.cxx:59: warning: no matching class member found for 
  STAGGER Mesh::getStagger(CELL_LOC vloc, MAYBE_UNUSED(CELL_LOC inloc), const CELL_LOC outloc, const CELL_LOC allowedStaggerLoc) const
Possible candidates:
  'STAGGER Mesh::getStagger(const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'
  'STAGGER Mesh::getStagger(const CELL_LOC vloc, const CELL_LOC inloc, const CELL_LOC outloc, const CELL_LOC allowedloc) const'

sh: line 1: latex: command not found
error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log!
build_openmpi/src/sys/range.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/slepclib.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/slepclib.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/timer.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/timer.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/type_name.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/type_name.cxx...
Preprocessing /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/utils.cxx...
Parsing file /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/utils.cxx...
Building macro definition list...
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Generating docs for file /builddir/build/BUILD/BOUT++-v4.3/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
.2/build_openmpi/include/boutmain.hxx...
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  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/build_openmpi/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx...
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Generating/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
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  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
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Generating docs for compound ParDerivFactory../builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
.
Generating docs for compound ParseException...
Generating docs for compound PetscLib...
Generating docs for compound PetscSolver...
Generating docs for compound PhysicsModel...
Generating docs for nested compound PhysicsModel::PhysicsModelMonitor...
Generating docs for compound PncFormat...
Generating docs for compound Power...
Generating docs for compound PowerSolver...
Generating docs for compound produceCombinations...
Generating docs for compound PromoteType...
Generating docs for compound PvodeSolver...
Generating docs for compound RangeIterator...
Generating docs for compound Region...
Generating docs for compound RegionStats...
Generating docs for compound RegisterInFactory...
Generating docs for compound RegisterInFactory< Solver, DerivedType >...
Generating docs for compound registerMethod...
Generating docs for compound RK3SSP...
Generating docs for compound RK4SIMPLEScheme...
Generating docs for compound RK4Solver...
Generating docs for compound RKF34Scheme...
Generating docs for compound RKF45Scheme...
Generating docs for compound RKGenericSolver...
Generating docs for compound RKScheme...
Generating docs for compound RKSchemeFactory...
Generating docs for compound RunMetrics...
Generating docs for compound SaveDerivsOp...
Generating docs for compound SaveVarOp...
Generating docs for compound Set...
Generating docs for compound ShiftedMetric...
Generating docs for nested compound ShiftedMetric::ParallelSlicePhase...
Generating docs for compound SlepcLib...
Generating docs for compound SlepcSolver...
Generating docs for compound snes_info...
Generating docs for compound SNESSolver...
Generating docs for compound Solver...
Generating docs for nested compound Solver::VarStr...
Generating docs for compound SolverFactory...
Generating docs for compound SpecificInd...
Generating docs for compound SplitFluxDerivativeType...
Generating docs for compound SplitRK...
Generating docs for compound stencil...
Generating docs for compound Subtract...
Generating docs for compound SurfaceIter...
Generating docs for compound Tensor...
Generating docs for compound Timer...
Generating docs for nested compound Timer::timer_info...
Generating docs for compound TypeContainer...
Generating docs for compound Uncopyable...
Generating docs for compound Vector2D...
Generating docs for compound Vector3D...
Generating namespace index...
Generating docs for namespace bout
Generating docs for compound bout::HeatFluxSNB...
Generating docs for namespace bout::derivatives
Generating docs for namespace bout::derivatives::index
Generating docs for namespace bout::experimental
Generating docs for compound bout::experimental::CommandLineArgs...
Generating docs for compound bout::experimental::OptionsNetCDF...
Generating docs for namespace bout::fft
Generating docs for namespace bout::globals
Generating docs for namespace bout::inversion
Generating docs for compound bout::inversion::InvertableOperator...
Generating docs for namespace bout::utils
Generating docs for compound bout::utils::_Unique_if...
Generating docs for compound bout::utils::_Unique_if< T[]>...
Generating docs for compound bout::utils::_Unique_if< T[N]>...
Generating docs for compound bout::utils::function_traits...
Generating docs for compound bout::utils::function_traits< R(*)(Args...)>...
Generating docs for nested compound bout::utils::function_traits< R(*)(Args...)>::arg...
Generating docs for namespace bout::utils::details
Generating docs for compound bout::utils::details::CompareTypes...
Generating docs for compound bout::utils::details::CompareTypes< T, T >...
Generating docs for compound bout::utils::details::IsEqual...
Generating docs for compound bout::utils::details::StaticCastOrThrow...
Generating docs for compound bout::utils::details::ToString...
Generating docs for namespace FV
Generating docs for compound FV::Stencil1D...
Generating docs for compound FV::Upwind...
Generating docs for compound FV::Fromm...
Generating docs for compound FV::MinMod...
Generating docs for compound FV::MC...
Generating docs for namespace gen_fieldops
Generating docs for compound gen_fi/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/array.hxx:385: warning: Unsupported xml/html tag <size> found
eldops::Field...
Generating docs for namespace pvode
Generating docs for compound pvode::bandmat_type...
Generating docs for compound pvode::CVodeMemRec...
Generating docs for compound pvode::machenv_type...
Generating docs for compound pvode::nvec_type...
Generating docs for compound pvode::pvbbddata_type...
Generating docs for compound pvode::SpgmrMemRec...
Generating docs for namespace SI
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating XML output...
Generating XML output for class bout::utils::_Unique_if
Generating XML output for class bout::utils::_Unique_if< T[]>
Generating XML output for class bout::utils::_Unique_if< T[N]>
Generating XML output for class Add
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>::arg
Generating XML output for class ArkodeSolver
Generating XML output for class Array
Generating XML output for class ArrayData
Generating XML output for class asExpr
Generating XML output for class asExpr< double >
Generating XML output for class asExpr< Field3D >
Generating XML output for class asExpr< float >
Generating XML output for class asExpr< int >
Generating XML output for class Options::AttributeType
Generating XML output for class pvode::bandmat_type
Generating XML output for class Bilinear
Generating XML output for class BinaryExpr
Generating XML output for class BinaryResult
Generating XML output for class BoundaryConstGradient
Generating XML output for class BoundaryConstLaplace
Generating XML output for class BoundaryDirichlet
Generating XML output for class BoundaryDirichlet_2ndOrder
Generating XML output for class BoundaryDirichlet_4thOrder
Generating XML output for class BoundaryDirichlet_O3
Generating XML output for class BoundaryDirichlet_O4
Generating XML output for class BoundaryDivCurl
Generating XML output for class BoundaryFactory
Generating XML output for class BoundaryFree
Generating XML output for class BoundaryFree_O2
Generating XML output for class BoundaryFree_O3
Generating XML output for class BoundaryFromFieldAligned
Generating XML output for class BoundaryModifier
Generating XML output for class BoundaryNeumann
Generating XML output for class BoundaryNeumann2
Generating XML output for class BoundaryNeumann_2ndOrder
Generating XML output for class BoundaryNeumann_4thOrder
Generating XML output for class BoundaryNeumann_NonOrthogonal
Generating XML output for class BoundaryNeumann_O4
Generating XML output for class BoundaryNeumannPar
Generating XML output for class BoundaryOp
Generating XML output for class BoundaryOpBase
Generating XML output for class BoundaryOpPar
Generating XML output for class BoundaryOpPar_dirichlet
Generating XML output for class BoundaryOpPar_dirichlet_interp
Generating XML output for class BoundaryOpPar_dirichlet_O3
Generating XML output for class BoundaryOpPar_neumann
Generating XML output for class BoundaryRegion
Generating XML output for class BoundaryRegionBase
Generating XML output for class BoundaryRegionPar
Generating XML output for class BoundaryRegionXIn
Generating XML output for class BoundaryRegionXOut
Generating XML output for class BoundaryRegionYDown
Generating XML output for class BoundaryRegionYUp
Generating XML output for class BoundaryRelax
Generating XML output for class BoundaryRobin
Generating XML output for class BoundaryToFieldAligned
Generating XML output for class BoundaryWidth
Generating XML output for class BoundaryZeroLaplace
Generating XML output for class BoundaryZeroLaplace2
Generating XML output for class BoutComm
Generating XML output for class BoutException
Generating XML output for class BoutIterationFail
Generating XML output for class BoutMask
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:175: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text)=0 is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:191: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/dataformat.hxx:207: warning: The following parameter of DataFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value)=0 is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/generic_factory.hxx:57: warning: The following parameter of Factory::create(const std::string &name, Args &&... args) is not documented:
  parameter 'args'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/field2d.hxx:67: warning: The following parameters of Field2D::Field2D(Mesh *localmesh=nullptr, CELL_LOC location_in=CELL_CENTRE, DirectionTypes directions_in={YDirectionType::Standard, ZDirectionType::Average}) are not documented:
  parameter 'location_in'
  parameter 'directions_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:191: warning: The following parameter of GridFromOptions::get(Mesh *mesh, std::string &sval, const std::string &name, const std::string &def="") is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/griddata.hxx:217: warning: The following parameter of GridFromOptions::get(Mesh *mesh, BoutReal &rval, const std::string &name, BoutReal def=0.0) is not documented:
  parameter 'def'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:129: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:130: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/h5_format.hxx:131: warning: The following parameter of H5Format::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
Generating XML output for class BoutMesh
Generating XML output for class BoutMonitor
Generating XML output for class BoutRhsFail
Generating XML output for class CASHKARPScheme
Generating XML output for class bout::experimental::CommandLineArgs
Generating XML output for class BoutMesh::CommHandle
Generating XML output for class bout::utils::details::CompareTypes
Generating XML output for class bout::utils::details::CompareTypes< T, T >
Generating XML output for class ConditionalOutput
Generating XML output for class Coordinates
Generating XML output for class pvode::CVodeMemRec
Generating XML output for class CvodeSolver
Generating XML output for class CyclicReduce
Generating XML output for class Datafile
Generating XML output for class DataFormat
Generating XML output for class DeferredFunction
Generating XML output for class DerivativeStore
Generating XML output for class DerivativeType
Generating XML output for class DirectionTypes
Generating XML output for class Divide
Generating XML output for class DummyOutput
Generating XML output for class EmptyFormat
Generating XML output for class enumWrapper
Generating XML output for class EulerSolver
Generating XML output for class ExpressionParser
Generating XML output for class exprTraits
Generating XML output for class exprTraits< double >
Generating XML output for class exprTraits< float >
Generating XML output for class exprTraits< int >
Generating XML output for class Factory
Generating XML output for class FCIMap
Generating XML output for class FCITransform
Generating XML output for class fcmplx
Generating XML output for class Field
Generating XML output for class gen_fieldops::Field
Generating XML output for class Field2D
Generating XML output for class Field2DExpr
Generating XML output for class Field3D
Generating XML output for class Field3DExpr
Generating XML output for class FieldAbs
Generating XML output for class FieldATan
Generating XML output for class FieldBallooning
Generating XML output for class FieldBinary
Generating XML output for class FieldCos
Generating XML output for class FieldCosh
Generating XML output for class FieldData
Generating XML output for class FieldErf
Generating XML output for class FieldFactory
Generating XML output for class FieldFunction
Generating XML output for class FieldGaussian
Generating XML output for class FieldGenerator
Generating XML output for class FieldGenOneArg
Generating XML output for class FieldGenTwoArg
Generating XML output for class FieldGroup
Generating XML output for class FieldHeaviside
Generating XML output for class FieldMax
Generating XML output for class FieldMin
Generating XML output for class FieldMixmode
Generating XML output for class FieldNull
Generating XML output for class FieldPerp
Generating XML output for class FieldRound
Generating XML output for class FieldSin
Generating XML output for class FieldSinh
Generating XML output for class FieldSqrt
Generating XML output for class FieldTanh
Generating XML output for class FieldTanhHat
Generating XML output for class FieldValue
Generating XML output for class FieldValuePtr
Generating XML output for class FieldVisitor
Generating XML output for class FormatFactory
Generating XML output for class FV::Fromm
Generating XML output for class bout::utils::function_traits
Generating XML output for class bout::utils::function_traits< R(*)(Args...)>
Generating XML output for class GlobalField
Generating XML output for class GlobalField2D
Generating XML output for class GlobalField3D
Generating XML output for class GridDataSource
Generating XML output for class GridFile
Generating XML output for class GridFromOptions
Generating XML output for class H5Format
Generating XML output for class bout::HeatFluxSNB
Generating XML output for class HermiteSpline
Generating XML output for class IdaSolver
Generating XML output for class IMEXBDF2
Generating XML output for class BoundaryRegionPar::IndexPoint
Generating XML output for class BoundaryRegionPar::Indices
Generating XML output for class Interpolation
Generating XML output for class InterpolationFactory
Generating XML out/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:185: warning: argument 'MatA' from the argument list of LaplacePetsc::Element has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef1' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef2' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef3' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef4' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/petsc_laplace.hxx:186: warning: argument 'coef5' from the argument list of LaplacePetsc::Coeffs has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:212: warning: The following parameters of Laplacian::create(Options *opt=nullptr, const CELL_LOC loc=CELL_CENTRE, Mesh *mesh_in=nullptr) are not documented:
  parameter 'loc'
  parameter 'mesh_in'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'avec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'bvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/invert_laplace.hxx:255: warning: argument 'cvec' from the argument list of Laplacian::tridagMatrix has multiple @param documentation sections
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:730: warning: argument 'v' of command @param is not found in the argument list of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/mesh.hxx:748: warning: The following parameter of Mesh::indexVDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", REGION region=RGN_NOBNDRY) const is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:133: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:134: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/nc_format.hxx:135: warning: The following parameter of NcFormat::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:134: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, std::string &text) is not documented:
  parameter 'text'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:135: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, int &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/ncxx4.hxx:136: warning: The following parameter of Ncxx4::getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) is not documented:
  parameter 'value'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'parent' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:160: warning: argument 'sectionName' of command @param is not found in the argument list of Options::Options(Options *parent_instance, std::string full_name)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/options.hxx:164: warning: The following parameters of Options::Options(Options *parent_instance, std::string full_name) are not documented:
  parameter 'parent_instance'
  parameter 'full_name'
put for class bout::inversion::InvertableOperator
Generating XML output for class InvertPar
Generating XML output for class InvertParCR
Generating XML output for class bout::utils::details::IsEqual
Generating XML output for class KarniadakisSolver
Generating XML output for class Lagrange4pt
Generating XML output for class LaplaceCyclic
Generating XML output for class LaplaceFactory
Generating XML output for class LaplaceMultigrid
Generating XML output for class LaplaceMumps
Generating XML output for class LaplaceNaulin
Generating XML output for class LaplacePDD
Generating XML output for class LaplacePetsc
Generating XML output for class LaplaceSerialBand
Generating XML output for class LaplaceSerialTri
Generating XML output for class LaplaceShoot
Generating XML output for class LaplaceSPT
Generating XML output for class LaplaceXY
Generating XML output for class LaplaceXZ
Generating XML output for class LaplaceXZcyclic
Generating XML output for class LaplaceXZpetsc
Generating XML output for class Laplacian
Generating XML output for class LegacyModel
Generating XML output for class ExpressionParser::LexInfo
Generating XML output for class Literal
Generating XML output for class LoadVarOp
Generating XML output for class pvode::machenv_type
Generating XML output for class Matrix
Generating XML output for class FV::MC
Generating XML output for class Mesh
Generating XML output for class MeshFactory
Generating XML output for class metaData
Generating XML output for class FV::MinMod
Generating XML output for class Monitor
Generating XML output for class MonotonicHermiteSpline
Generating XML output for class MsgStack
Generating XML output for class MsgStackItem
Generating XML output for class Multigrid1DP
Generating XML output for class Multigrid2DPf1D
Generating XML output for class MultigridAlg
Generating XML output for class MultigridSerial
Generating XML output for class multiostream
Generating XML output for class multioutbuf
Generating XML output for class multioutbuf_init
Generating XML output for class Multiply
Generating XML output for class NcFormat
Generating XML output for class Ncxx4
Generating XML output for class pvode::nvec_type
Generating XML output for class OptionINI
Generating XML output for class OptionParser
Generating XML output for class Options
Generating XML output for class bout::experimental::OptionsNetCDF
Generating XML output for class OptionsReader
Generating XML output for class Options::OptionValue
Generating XML output for class Output
Generating XML output for class ShiftedMetric::ParallelSlicePhase
Generating XML output for class ParallelTransform
Generating XML output for class ParallelTransformIdentity
Generating XML output for class ParDerivFactory
Generating XML output for class ParseException
Generating XML output for class LaplacePDD::PDD_data
Generating XML output for class PetscLib
Generating XML output for class PetscSolver
Generating XML output for class PhysicsModel
Generating XML output for class PhysicsModel::PhysicsModelMonitor
Generating XML output for class PncFormat
Generating XML output for class Power
Generating XML output for class PowerSolver
Generating XML output for class produceCombinations
Generating XML output for class PromoteType
Generating XML output for class pvode::pvbbddata_type
Generating XML output for class PvodeSolver
Generating XML output for class RangeIterator
Generating XML output for class BoundaryRegionPar::RealPoint
Generating XML output for class Region
Generating XML output for class RegionStats
Generating XML output for class RegisterInFactory
Generating XML output for class RegisterInFactory< Solver, DerivedType >
Generating XML output for class registerMethod
Generating XML output for class RK3SSP
Generating XML output for class RK4SIMPLEScheme
Generating XML output for class RK4Solver
Generating XML output for class RKF34Scheme
Generating XML output for class RKF45Scheme
Generating XML output for class RKGenericSolver
Generating XML output for class RKScheme
Generating XML output for class RKSchemeFactory
Generating XML output for class RunMetric/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:265: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Field2D &zangle, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/paralleltransform.hxx:284: warning: The following parameter of ShiftedMetric::shiftZ(const Field3D &f, const Tensor< dcomplex > &phs, const YDirectionType y_direction_out, const std::string &region="RGN_NOX") const is not documented:
  parameter 'region'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/surfaceiter.hxx:37: warning: The following parameter of SurfaceIter::SurfaceIter(Mesh *mesh, bool include_guards=false) is not documented:
  parameter 'include_guards'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:276: warning: argument 'v' of command @param is not found in the argument list of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY")
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/index_derivs_interface.hxx:292: warning: The following parameter of bout::derivatives::index::VDDX(const T &vel, const T &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT", const std::string &region="RGN_NOBNDRY") is not documented:
  parameter 'vel'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:81: warning: Found unknown command '\v'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/sys/variant.hxx:118: warning: Found unknown command '\v'
s
Generating XML output for class SaveDerivsOp
Generating XML output for class SaveVarOp
Generating XML output for class Set
Generating XML output for class ShiftedMetric
Generating XML output for class SlepcLib
Generating XML output for class SlepcSolver
Generating XML output for class snes_info
Generating XML output for class SNESSolver
Generating XML output for class Solver
Generating XML output for class SolverFactory
Generating XML output for class SpecificInd
Generating XML output for class pvode::SpgmrMemRec
Generating XML output for class SplitFluxDerivativeType
Generating XML output for class SplitRK
Generating XML output for class LaplaceSPT::SPT_data
Generating XML output for class bout::utils::details::StaticCastOrThrow
Generating XML output for class stencil
Generating XML output for class FV::Stencil1D
Generating XML output for class Subtract
Generating XML output for class SurfaceIter
Generating XML output for class Tensor
Generating XML output for class Timer
Generating XML output for class Timer::timer_info
Generating XML output for class bout::utils::details::ToString
Generating XML output for class TypeContainer
Generating XML output for class Uncopyable
Generating XML output for class FV::Upwind
Generating XML output for class Datafile::VarStr
Generating XML output for class Solver::VarStr
Generating XML output for class Vector2D
Generating XML output for class Vector3D
Generating XML output for class LaplaceXZpetsc::YSlice
Generating XML output for namespace @106
Generating XML output for namespace @107
Generating XML output for namespace @175
Generating XML output for namespace @176
Generating XML output for namespace @177
Generating XML output for namespace @189
Generating XML output for namespace @205
Generating XML output for namespace @207
Generating XML output for namespace @209
Generating XML output for namespace @211
Generating XML output for namespace @213
Generating XML output for namespace @215
Generating XML output for namespace @217
Generating XML output for namespace @219
Generating XML output for namespace @221
Generating XML output for namespace @223
Generating XML output for namespace @225
Generating XML output for namespace @235
Generating XML output for namespace @240
Generating XML output for namespace @242
Generating XML output for namespace @244
Generating XML output for namespace @247
Generating XML output for namespace @251
Generating XML output for namespace @256
Generating XML output for namespace @4
Generating XML output for namespace bout
Generating XML output for namespace bout::derivatives
Generating XML output for namespace bout::derivatives::index
Generating XML output for namespace bout::experimental
Generating XML output for namespace bout::fft
Generating XML output for namespace bout::globals
Generating XML output for namespace bout::inversion
Generating XML output for namespace bout::utils
Generating XML output for namespace bout::utils::details
Generating XML output for namespace FV
Generating XML output for namespace gen_fieldops
Generating XML output for namespace netCDF
Generating XML output for namespace pvode
Generating XML output for namespace SI
Generating XML output for namespace std
Generating XML output for file boundary_factory.hxx
Generating XML output for file boundary_op.hxx
Generating XML output for file boundary_region.hxx
Generating XML output for file boundary_standard.hxx
Generating XML output for file bout.hxx
Generating XML output for file array.hxx
Generating XML output for file assert.hxx
Generating XML output for file constants.hxx
Generating XML output for file coordinates.hxx
Generating XML output for file deprecated.hxx
Generating XML output for file deriv_store.hxx
Generating XML output for file expr.hxx
Generating XML output for file field_visitor.hxx
Generating XML output for file fieldgroup.hxx
Generating XML output for file format.hxx
Generating XML output for file fv_ops.hxx
Generating XML output for file generic_factory.hxx
Generating XML output for file globalfield.hxx
Generating XML output for file griddata.hxx
Generating XML ou/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:208: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/difops.hxx:299: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:61: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:91: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:131: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
tput for file index_derivs.hxx
Generating XML output for file index_derivs_interface.hxx
Generating XML output for file laplacexy.hxx
Generating XML output for file laplacexz.hxx
Generating XML output for file invertable_operator.hxx
Generating XML output for file macro_for_each.hxx
Generating XML output for file mesh.hxx
Generating XML output for file monitor.hxx
Generating XML output for file openmpwrap.hxx
Generating XML output for file paralleltransform.hxx
Generating XML output for file petsclib.hxx
Generating XML output for file physicsmodel.hxx
Generating XML output for file region.hxx
Generating XML output for file rkscheme.hxx
Generating XML output for file rvec.hxx
Generating XML output for file scorepwrapper.hxx
Generating XML output for file slepclib.hxx
Generating XML output for file snb.hxx
Generating XML output for file solver.hxx
Generating XML output for file solverfactory.hxx
Generating XML output for file surfaceiter.hxx
Generating XML output for file expressionparser.hxx
Generating XML output for file gettext.hxx
Generating XML output for file range.hxx
Generating XML output for file timer.hxx
Generating XML output for file type_name.hxx
Generating XML output for file uncopyable.hxx
Generating XML output for file variant.hxx
Generating XML output for file template_combinations.hxx
Generating XML output for file traits.hxx
Generating XML output for file bout_types.hxx
Generating XML output for file boutcomm.hxx
Generating XML output for file boutexception.hxx
Generating XML output for file boutmain.hxx
Generating XML output for file cyclic_reduction.hxx
Generating XML output for file datafile.hxx
Generating XML output for file dataformat.hxx
Generating XML output for file dcomplex.hxx
Generating XML output for file derivs.hxx
Generating XML output for file difops.hxx
Generating XML output for file fft.hxx
Generating XML output for file field.hxx
Generating XML output for file field2d.hxx
Generating XML output for file field3d.hxx
Generating XML output for file field_data.hxx
Generating XML output for file field_factory.hxx
Generating XML output for file fieldperp.hxx
Generating XML output for file globals.hxx
Generating XML output for file gyro_average.hxx
Generating XML output for file initialprofiles.hxx
Generating XML output for file interpolation.hxx
Generating XML output for file interpolation_factory.hxx
Generating XML output for file invert_laplace.hxx
Generating XML output for file invert_parderiv.hxx
Generating XML output for file lapack_routines.hxx
Generating XML output for file mask.hxx
Generating XML output for file msg_stack.hxx
Generating XML output for file multiostream.hxx
Generating XML output for file options.hxx
Generating XML output for file options_netcdf.hxx
Generating XML output for file optionsreader.hxx
Generating XML output for file output.hxx
Generating XML output for file parallel_boundary_op.hxx
Generating XML output for file parallel_boundary_region.hxx
Generating XML output for file band.h
Generating XML output for file cvdiag.h
Generating XML output for file cvode.h
Generating XML output for file cvspgmr.h
Generating XML output for file iterativ.h
Generating XML output for file llnlmath.h
Generating XML output for file llnltyps.h
Generating XML output for file nvector.h
Generating XML output for file pvbbdpre.h
Generating XML output for file smalldense.h
Generating XML output for file spgmr.h
Generating XML output for file vector.h
Generating XML output for file smoothing.hxx
Generating XML output for file sourcex.hxx
Generating XML output for file stencils.hxx
Generating XML output for file unused.hxx
Generating XML output for file utils.hxx
Generating XML output for file vecops.hxx
Generating XML output for file vector2d.hxx
Generating XML output for file vector3d.hxx
Generating XML output for file where.hxx
Generating XML output for file bout++.cxx
Generating XML output for file field.cxx
Generating XML output for file field2d.cxx
Generating XML output for file field3d.cxx
Generating XML output for file field_data.cxx
Generating XML output for file field_factory.cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:274: warning: The following parameter of Grad2_par2(const Field2D &f, CELL_LOC outloc=CELL_DEFAULT, const std::string &method="DEFAULT") is not documented:
  parameter 'method'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/difops.cxx:287: warning: The following parameter of Div_par_K_Grad_par(BoutReal kY, const Field2D &f, CELL_LOC outloc=CELL_DEFAULT) is not documented:
  parameter 'outloc'
Generating XML output for file fieldgenerators.cxx
Generating XML output for file fieldgenerators.hxx
Generating XML output for file fieldgroup.cxx
Generating XML output for file fieldperp.cxx
Generating XML output for file gen_fieldops.py
Generating XML output for file generated_fieldops.cxx
Generating XML output for file globalfield.cxx
Generating XML output for file initialprofiles.cxx
Generating XML output for file vecops.cxx
Generating XML output for file vector2d.cxx
Generating XML output for file vector3d.cxx
Generating XML output for file where.cxx
Generating XML output for file datafile.cxx
Generating XML output for file dataformat.cxx
Generating XML output for file formatfactory.cxx
Generating XML output for file formatfactory.hxx
Generating XML output for file emptyformat.hxx
Generating XML output for file h5_format.cxx
Generating XML output for file h5_format.hxx
Generating XML output for file nc_format.cxx
Generating XML output for file nc_format.hxx
Generating XML output for file ncxx4.cxx
Generating XML output for file ncxx4.hxx
Generating XML output for file pnetcdf.cxx
Generating XML output for file pnetcdf.hxx
Generating XML output for file fft_fftw.cxx
Generating XML output for file lapack_routines.cxx
Generating XML output for file cyclic_laplace.cxx
Generating XML output for file cyclic_laplace.hxx
Generating XML output for file multigrid_alg.cxx
Generating XML output for file multigrid_laplace.cxx
Generating XML output for file multigrid_laplace.hxx
Generating XML output for file multigrid_solver.cxx
Generating XML output for file mumps_laplace.cxx
Generating XML output for file mumps_laplace.hxx
Generating XML output for file naulin_laplace.cxx
Generating XML output for file naulin_laplace.hxx
Generating XML output for file pdd.cxx
Generating XML output for file pdd.hxx
Generating XML output for file petsc_laplace.cxx
Generating XML output for file petsc_laplace.hxx
Generating XML output for file serial_band.cxx
Generating XML output for file serial_band.hxx
Generating XML output for file serial_tri.cxx
Generating XML output for file serial_tri.hxx
Generating XML output for file shoot_laplace.cxx
Generating XML output for file shoot_laplace.hxx
Generating XML output for file spt.cxx
Generating XML output for file spt.hxx
Generating XML output for file invert_laplace.cxx
Generating XML output for file laplacefactory.cxx
Generating XML output for file laplacefactory.hxx
Generating XML output for file laplacexy.cxx
Generating XML output for file laplacexz-cyclic.cxx
Generating XML output for file laplacexz-cyclic.hxx
Generating XML output for file laplacexz-petsc.cxx
Generating XML output for file laplacexz-petsc.hxx
Generating XML output for file laplacexz.cxx
Generating XML output for file cyclic.cxx
Generating XML output for file cyclic.hxx
Generating XML output for file invert_parderiv.cxx
Generating XML output for file parderiv_factory.cxx
Generating XML output for file parderiv_factory.hxx
Generating XML output for file boundary_factory.cxx
Generating XML output for file boundary_region.cxx
Generating XML output for file boundary_standard.cxx
Generating XML output for file coordinates.cxx
Generating XML output for file gridfromfile.cxx
Generating XML output for file gridfromoptions.cxx
Generating XML output for file difops.cxx
Generating XML output for file fv_ops.cxx
Generating XML output for file boutmesh.cxx
Generating XML output for file boutmesh.hxx
Generating XML output for file index_derivs.cxx
Generating XML output for file interpolation.cxx
Generating XML output for file bilinear.cxx
Generating XML output for file hermite_spline.cxx
Generating XML output for file interpolation_factory.cxx
Generating XML output for file lagrange_4pt.cxx
Generating XML output for file monotonic_hermite_spline.cxx
Generating XML output for file mesh.cxx
Generating XML output for file meshfactory.cxx
Generating XML output for file meshfactory.hxx
Generating XML output for file fci.cxx
Generating XML output for file fci.hxx
Generating XML output for file identity.cxx
Generating XML output for file shiftedmet/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:52: warning: argument 'flags' of command @param is not found in the argument list of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:78: warning: The following parameters of gyroPade0(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:84: warning: argument 'flags' of command @param is not found in the argument list of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:119: warning: The following parameters of gyroPade1(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/gyro_average.hxx:120: warning: argument 'flags' of command @param is not found in the argument list of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/gyro_average.cxx:149: warning: The following parameters of gyroPade2(const Field3D &f, const Field3D &rho, int inner_boundary_flags, int outer_boundary_flags) are not documented:
  parameter 'inner_boundary_flags'
  parameter 'outer_boundary_flags'
ric.cxx
Generating XML output for file parallel_boundary_op.cxx
Generating XML output for file parallel_boundary_region.cxx
Generating XML output for file surfaceiter.cxx
Generating XML output for file gyro_average.cxx
Generating XML output for file physicsmodel.cxx
Generating XML output for file smoothing.cxx
Generating XML output for file snb.cxx
Generating XML output for file sourcex.cxx
Generating XML output for file arkode.cxx
Generating XML output for file arkode.hxx
Generating XML output for file cvode.cxx
Generating XML output for file cvode.hxx
Generating XML output for file euler.cxx
Generating XML output for file euler.hxx
Generating XML output for file ida.cxx
Generating XML output for file ida.hxx
Generating XML output for file imex-bdf2.cxx
Generating XML output for file imex-bdf2.hxx
Generating XML output for file karniadakis.cxx
Generating XML output for file karniadakis.hxx
Generating XML output for file petsc.cxx
Generating XML output for file petsc.hxx
Generating XML output for file power.cxx
Generating XML output for file power.hxx
Generating XML output for file pvode.cxx
Generating XML output for file pvode.hxx
Generating XML output for file rk3-ssp.cxx
Generating XML output for file rk3-ssp.hxx
Generating XML output for file rk4.cxx
Generating XML output for file rk4.hxx
Generating XML output for file cashkarp.cxx
Generating XML output for file cashkarp.hxx
Generating XML output for file rk4simple.cxx
Generating XML output for file rk4simple.hxx
Generating XML output for file rkf34.cxx
Generating XML output for file rkf34.hxx
Generating XML output for file rkf45.cxx
Generating XML output for file rkf45.hxx
Generating XML output for file rkgeneric.cxx
Generating XML output for file rkgeneric.hxx
Generating XML output for file rkscheme.cxx
Generating XML output for file rkschemefactory.cxx
Generating XML output for file rkschemefactory.hxx
Generating XML output for file slepc.cxx
Generating XML output for file slepc.hxx
Generating XML output for file snes.cxx
Generating XML output for file snes.hxx
Generating XML output for file split-rk.cxx
Generating XML output for file split-rk.hxx
Generating XML output for file solver.cxx
Generating XML output for file solverfactory.cxx
Generating XML output for file bout_types.cxx
Generating XML output for file boutcomm.cxx
Generating XML output for file boutexception.cxx
Generating XML output for file derivs.cxx
Generating XML output for file expressionparser.cxx
Generating XML output for file msg_stack.cxx
Generating XML output for file options.cxx
Generating XML output for file optionparser.hxx
Generating XML output for file options_ini.cxx
Generating XML output for file options_ini.hxx
Generating XML output for file options_netcdf.cxx
Generating XML output for file optionsreader.cxx
Generating XML output for file output.cxx
Generating XML output for file petsclib.cxx
Generating XML output for file range.cxx
Generating XML output for file slepclib.cxx
Generating XML output for file timer.cxx
Generating XML output for file type_name.cxx
Generating XML output for file utils.cxx
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/arkode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/impls/bout/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/cashkarp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/cvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/cyclic/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/data/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/euler/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/field/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/hdf5/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/ida/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/imex-bdf2/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/interpolation/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/bout/invert/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/karniadakis/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexy/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/multigrid/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/mumps/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/naulin/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/netcdf4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/sys/options/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/mesh/parallel/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/parderiv/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/pdd/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplace/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/invert/laplacexz/impls/petsc/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/physics/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/fileio/impls/pnetcdf/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/power/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/include/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/pvode/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk3-ssp/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rk4/
Generate XML output for dir /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/src/solver/impls/rkgeneric/impls/rk4simple/
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PYTHONPATH=../tools/pylib:$PYTHONPATH sphinx-build-3 -b html sphinx/ html/
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WARNING: missing attribute mentioned in :members: or __all__: module boutdata, attribute gen_surface
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No module named 'bunch'
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/usr/lib64/openmpi/lib/libpetsc.so.3.14: undefined symbol: H5Pset_dxpl_mpio
none found
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:217: WARNING: unknown document: ../_breathe_autogen/file/spt_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:221: WARNING: unknown document: ../_breathe_autogen/file/pdd_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:223: WARNING: unknown document: ../_breathe_autogen/file/pdd_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:228: WARNING: unknown document: ../_breathe_autogen/file/invert__parderiv_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:232: WARNING: unknown document: ../_breathe_autogen/file/parderiv__factory_8hxx
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/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: ../_breathe_autogen/file/serial_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:242: WARNING: unknown document: ../_breathe_autogen/file/serial_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:246: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:248: WARNING: unknown document: ../_breathe_autogen/file/cyclic_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:252: WARNING: unknown document: ../_breathe_autogen/file/lapack__routines_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:256: WARNING: unknown document: ../_breathe_autogen/file/boundary__factory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:260: WARNING: unknown document: ../_breathe_autogen/file/boundary__region_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:265: WARNING: unknown document: ../_breathe_autogen/file/boundary__standard_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:269: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: ../_breathe_autogen/file/interpolation_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:277: WARNING: unknown document: ../_breathe_autogen/file/mesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:285: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: ../_breathe_autogen/file/boutmesh_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:294: WARNING: unknown document: ../_breathe_autogen/file/gyro__average_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: ../_breathe_autogen/file/smoothing_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:299: WARNING: unknown document: ../_breathe_autogen/file/sourcex_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:305: WARNING: unknown document: ../_breathe_autogen/file/solver_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:311: WARNING: unknown document: ../_breathe_autogen/file/solverfactory_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:317: WARNING: unknown document: ../_breathe_autogen/file/cvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:321: WARNING: unknown document: ../_breathe_autogen/file/cvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:325: WARNING: unknown document: ../_breathe_autogen/file/ida_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:329: WARNING: unknown document: ../_breathe_autogen/file/ida_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:333: WARNING: unknown document: ../_breathe_autogen/file/petsc_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:336: WARNING: unknown document: ../_breathe_autogen/file/petsc_8hxx
generating indices... /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:340: WARNING: unknown document: ../_breathe_autogen/file/pvode_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:344: WARNING: unknown document: ../_breathe_autogen/file/pvode_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:348: WARNING: unknown document: ../_breathe_autogen/file/boutcomm_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:350: WARNING: unknown document: ../_breathe_autogen/file/boutexception_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/derivs_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: unknown document: ../_breathe_autogen/file/difops_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:353: WARNING: undefined label: sec-derivatives (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:359: WARNING: unknown document: ../_breathe_autogen/file/msg__stack_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:366: WARNING: unknown document: ../_breathe_autogen/file/options_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:370: WARNING: unknown document: ../_breathe_autogen/file/optionsreader_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:372: WARNING: unknown document: ../_breathe_autogen/file/output_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:374: WARNING: unknown document: ../_breathe_autogen/file/range_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:378: WARNING: unknown document: ../_breathe_autogen/file/stencils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:382: WARNING: unknown document: ../_breathe_autogen/file/timer_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:386: WARNING: unknown document: ../_breathe_autogen/file/utils_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:392: WARNING: unknown document: ../_breathe_autogen/file/optionparser_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:394: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/code_layout.rst:396: WARNING: unknown document: ../_breathe_autogen/file/options__ini_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'mesh:maxregionblocksize'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    mesh:maxregionblocksize
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      mesh:maxregionblocksize
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        mesh:maxregionblocksize
        ----^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/data_types.rst:385: WARNING: Unparseable C++ cross-reference: 'BOUT.inp'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 4]
    BOUT.inp
    ----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 4]
      BOUT.inp
      ----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 4]
        BOUT.inp
        ----^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/griddata_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:4: WARNING: unknown document: ../_breathe_autogen/file/datafile_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:13: WARNING: unknown document: ../_breathe_autogen/file/dataformat_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/file_io.rst:268: WARNING: Unparseable C++ cross-reference: 'restart.redistribute'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 7]
    restart.redistribute
    -------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 7]
      restart.redistribute
      -------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 7]
        restart.redistribute
        -------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field2d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/field3d_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: ../_breathe_autogen/file/fieldperp_8hxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:182: WARNING: Unparseable C++ cross-reference: 'return\n0.5*(f.p - f.m);'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
    return
  0.5*(f.p - f.m);
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: return [error at 6]
      return
    0.5*(f.p - f.m);
      ------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:192: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:196: WARNING: Unparseable C++ cross-reference: '1'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    1
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      1
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:221: WARNING: Unparseable C++ cross-reference: 'REGISTER_DERIVATIVE(DDX_C2)()'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 19]
    REGISTER_DERIVATIVE(DDX_C2)()
    -------------------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Invalid C++ declaration: Expected end of definition or ;. [error at 27]
      REGISTER_DERIVATIVE(DDX_C2)()
      ---------------------------^
  If the function has a return type:
    Error in declarator
    If declarator-id with parameters-and-qualifiers:
      Invalid C++ declaration: Expected identifier in nested name. [error at 19]
        REGISTER_DERIVATIVE(DDX_C2)()
        -------------------^
    If parenthesis in noptr-declarator:
      Error in declarator or parameters-and-qualifiers
      If pointer to member declarator:
        Invalid C++ declaration: Expected '::' in pointer to member (function). [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^
      If declarator-id:
        Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 26]
          REGISTER_DERIVATIVE(DDX_C2)()
          --------------------------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:238: WARNING: Unparseable C++ cross-reference: '"C2"'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    "C2"
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      "C2"
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/differential_operators.rst:278: WARNING: Could not lex literal_block as "cpp". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/installing.rst:190: WARNING: Unparseable C++ cross-reference: 'export LC_CTYPE=C.utf8'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
    export LC_CTYPE=C.utf8
    ------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name, got keyword: export [error at 6]
      export LC_CTYPE=C.utf8
      ------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/installing.rst:358: WARNING: undefined label: sec-install-bout (if the link has no caption the label must precede a section header)
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:30: WARNING: Unparseable C++ cross-reference: 'examples/invertable_operator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 8]
    examples/invertable_operator
    --------^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 8]
      examples/invertable_operator
      --------^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 8]
        examples/invertable_operator
        --------^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -ksp_type
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/invertable_operator.rst:98: WARNING: Unparseable C++ cross-reference: '-invertable_ksp_type'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected identifier in nested name. [error at 0]
    -invertable_ksp_type
    ^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^
  If the function has a return type:
    Invalid C++ declaration: Expected identifier in nested name. [error at 0]
      -invertable_ksp_type
      ^

/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/laplacian.rst:186: WARNING: unknown document: ../_breathe_autogen/file/invert__laplace_8cxx
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/nonlocal.rst:117: WARNING: undefined label: tab-snb-options
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/output_and_post.rst:587: WARNING: Could not lex literal_block as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/sphinx/user_docs/time_integration.rst:916: WARNING: unknown document: ../_breathe_autogen/file/bout_09_09_8cxx
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build succeeded, 180 warnings.

The HTML pages are in html.
Documentation available in file:///builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual/html/index.html
make: Leaving directory '/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/manual'
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib;' export 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
~/build/BUILD/BOUT++-v4.3.2
LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset MPI_COMPILER
++ LD_LIBRARY_PATH=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib
++ export LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ popd
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.yEZHSK
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
++ dirname /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ cd BOUT++-v4.3.2
+ for mpi in mpich openmpi
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ pushd build_mpich
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ make install DESTDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
# Pre-install commands follow.
# Normal commands follow.
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//{,pvode,bout/sys,bout/invert}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/{/usr/lib64/mpich/lib,/usr/lib64/mpich/bin,/usr/share/bout++/idllib}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/bout++/pylib/{boutdata,boututils}
/usr/bin/install -c -m 644 include/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++/
/usr/bin/install -c -m 644 include/pvode/*.h /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//pvode/
/usr/bin/install -c -m 644 include/bout/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/
/usr/bin/install -c -m 644 include/bout/sys/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/sys/
/usr/bin/install -c -m 644 include/bout/invert/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//bout/invert/
/usr/bin/install -c -m 644 lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c -m 644 lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c -m 644 lib/libpvpre.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib
/usr/bin/install -c  bin/bout-config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin
/usr/bin/install -c  bin/bout-log-color /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin
/usr/bin/install -c -m 644  tools/idllib/*.pro /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/idllib/README /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/pylib/boutdata/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boutdata/
/usr/bin/install -c -m 644  tools/pylib/boututils/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boututils/
/usr/bin/install -c -m 644  make.config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++/
for mo in de/LC_MESSAGES/libbout.mo es/LC_MESSAGES/libbout.mo fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo zh_TW/LC_MESSAGES/libbout.mo; do /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/`dirname $mo`; /usr/bin/install -c -m 644 locale/$mo /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/$mo; done
# Post-install commands follow.
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config 
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/bin/bout-config
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/mpich-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/mpich/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/mpich-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
sed -i '26 i RELEASED                 = yes' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/mpich-x86_64/bout++//make.config
+ sed -i '27 i RELEASED                 = 4.3.2-4.fc34' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/include/mpich-x86_64/bout++/make.config
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++
+ rm -f /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/libpvpre.a
+ install lib/libbout++.so.4.3.1 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/
+ pushd /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/mpich/lib/
~/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib ~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
+ for f in *.so.*
+ ln -s libbout++.so.4.3.1 libbout++.so
+ for f in *.so.*
+ ln -s libpvode.so.1.0.0 libpvode.so
+ for f in *.so.*
+ ln -s libpvpre.so.1.0.0 libpvpre.so
+ popd
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2
+ popd
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/modulefiles/bout++
+ cat
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval unset 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ for mpi in mpich openmpi
+ pushd build_openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ make install DESTDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
# Pre-install commands follow.
# Normal commands follow.
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//{,pvode,bout/sys,bout/invert}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/{/usr/lib64/openmpi/lib,/usr/lib64/openmpi/bin,/usr/share/bout++/idllib}
/usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/bout++/pylib/{boutdata,boututils}
/usr/bin/install -c -m 644 include/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++/
/usr/bin/install -c -m 644 include/pvode/*.h /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//pvode/
/usr/bin/install -c -m 644 include/bout/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/
/usr/bin/install -c -m 644 include/bout/sys/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/sys/
/usr/bin/install -c -m 644 include/bout/invert/*.hxx /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//bout/invert/
/usr/bin/install -c -m 644 lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c -m 644 lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c -m 644 lib/libpvpre.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib
/usr/bin/install -c  bin/bout-config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin
/usr/bin/install -c  bin/bout-log-color /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin
/usr/bin/install -c -m 644  tools/idllib/*.pro /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/idllib/README /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/idllib/
/usr/bin/install -c -m 644  tools/pylib/boutdata/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boutdata/
/usr/bin/install -c -m 644  tools/pylib/boututils/*.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++/pylib/boututils/
/usr/bin/install -c -m 644  make.config /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++/
for mo in de/LC_MESSAGES/libbout.mo es/LC_MESSAGES/libbout.mo fr/LC_MESSAGES/libbout.mo zh_CN/LC_MESSAGES/libbout.mo zh_TW/LC_MESSAGES/libbout.mo; do /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/`dirname $mo`; /usr/bin/install -c -m 644 locale/$mo /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/locale/$mo; done
# Post-install commands follow.
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config 
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^idlpath=.*|idlpath=/usr/share/bout++/idllib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^pythonpath=.*|pythonpath=/usr/share/bout++/pylib/|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/bin/bout-config
sed -i "s|^BOUT_INCLUDE_PATH=.*|BOUT_INCLUDE_PATH=/usr/include/openmpi-x86_64/bout++|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i "s|^BOUT_LIB_PATH=.*|BOUT_LIB_PATH=/usr/lib64/openmpi/lib|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i "s|^BOUT_CONFIG_FILE=.*|BOUT_CONFIG_FILE=/usr/include/openmpi-x86_64/bout++/make.config|" /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
sed -i '26 i RELEASED                 = yes' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/include/openmpi-x86_64/bout++//make.config
+ sed -i '27 i RELEASED                 = 4.3.2-4.fc34' /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/include/openmpi-x86_64/bout++/make.config
+ rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/bout++
+ rm -f /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libbout++.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libpvode.a /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/libpvpre.a
+ install lib/libbout++.so.4.3.1 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/
+ pushd /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/openmpi/lib/
~/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib ~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
+ for f in *.so.*
+ ln -s libbout++.so.4.3.1 libbout++.so
+ for f in *.so.*
+ ln -s libpvode.so.1.0.0 libpvode.so
+ for f in *.so.*
+ ln -s libpvpre.so.1.0.0 libpvpre.so
+ popd
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
~/build/BUILD/BOUT++-v4.3.2
+ popd
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/modulefiles/bout++
+ cat
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
unset' 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
~/build/BUILD/BOUT++-v4.3.2/tools/pylib ~/build/BUILD/BOUT++-v4.3.2
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ pushd tools/pylib
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boutdata
+ cp boutdata/__init__.py boutdata/cbdtoeqdsk.py boutdata/collect.py boutdata/data.py boutdata/gen_surface.py boutdata/griddata.py boutdata/input.py boutdata/mayavi2.py boutdata/mms.py boutdata/pol_slice.py boutdata/processor_rearrange.py boutdata/restart.py boutdata/settings.py boutdata/shiftz.py boutdata/squashoutput.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boutdata/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/bout_runners
+ cp bout_runners/__init__.py bout_runners/bout_runners.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/bout_runners/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boututils
+ cp boututils/View3D.py boututils/__init__.py boututils/analyse_equil_2.py boututils/anim.py boututils/ask.py boututils/boutarray.py boututils/boutgrid.py boututils/boutwarnings.py boututils/calculus.py boututils/check_scaling.py boututils/closest_line.py boututils/contour.py boututils/crosslines.py boututils/datafile.py boututils/efit_analyzer.py boututils/fft_deriv.py boututils/fft_integrate.py boututils/file_import.py boututils/geqdsk.py boututils/idl_tabulate.py boututils/int_func.py boututils/linear_regression.py boututils/local_min_max.py boututils/mode_structure.py boututils/moment_xyzt.py boututils/options.py boututils/plotdata.py boututils/plotpolslice.py boututils/radial_grid.py boututils/read_geqdsk.py boututils/run_wrapper.py boututils/showdata.py boututils/spectrogram.py boututils/surface_average.py boututils/volume_integral.py boututils/watch.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/boututils/
+ for d in boutdata bout_runners boututils zoidberg
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/zoidberg
+ cp zoidberg/__init__.py zoidberg/boundary.py zoidberg/field.py zoidberg/fieldtracer.py zoidberg/grid.py zoidberg/plot.py zoidberg/poloidal_grid.py zoidberg/progress.py zoidberg/rzline.py zoidberg/test_field.py zoidberg/test_fieldtracer.py zoidberg/test_grid.py zoidberg/test_poloidal_grid.py zoidberg/test_rzline.py zoidberg/test_zoidberg.py zoidberg/zoidberg.py /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib/python3.9/site-packages/zoidberg/
+ popd
~/build/BUILD/BOUT++-v4.3.2
++ ls build_mpich/manual build_openmpi/manual -d
++ head -n1
+ mandir=build_mpich/manual
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/doc/bout++/
+ rm -rf build_mpich/manual/html/.buildinfo
+ rm -rf build_mpich/manual/html/.doctrees
+ rm -rf build_mpich/manual/html/_sources
+ cp -r build_mpich/manual/html /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/share/doc/bout++/
+ for mpi in mpich openmpi
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/mpich/
+ install build_mpich/tools/pylib/boutcore.cpython-39-x86_64-linux-gnu.so /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/mpich/
+ for mpi in mpich openmpi
+ mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/openmpi/
+ install build_openmpi/tools/pylib/boutcore.cpython-39-x86_64-linux-gnu.so /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64//usr/lib64/python3.9/site-packages/openmpi/
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64 libbout
+ /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 4.3.2-4.fc34 --unique-debug-suffix -4.3.2-4.fc34.x86_64 --unique-debug-src-base bout++-4.3.2-4.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BOUT++-v4.3.2
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libbout++.so.4.3.1
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libbout++.so.4.3.1
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libbout++.so.4.3.1
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libbout++.so.4.3.1
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/mpich/boutcore.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/mpich/boutcore.cpython-39-x86_64-linux-gnu.so
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/openmpi/boutcore.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9/site-packages/openmpi/boutcore.cpython-39-x86_64-linux-gnu.so
original debug info size: 320780kB, size after compression: 231800kB
/usr/lib/rpm/sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
16849 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib/debug/usr/lib64/python3.9 using /usr/bin/python3.9
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib/python3.9 using /usr/bin/python3.9
/usr/lib/python3.9/site-packages/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
/usr/lib/python3.9/site-packages/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:191: SyntaxWarning: "is" with a literal. Did you mean "=="?
/usr/lib/python3.9/site-packages/boutdata/data.py:206: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boutdata/data.py:217: SyntaxWarning: "is not" with a literal. Did you mean "!="?
/usr/lib/python3.9/site-packages/boututils/options.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="?
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/lib64/python3.9 using /usr/bin/python3.9
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/geqdsk.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/boutgrid.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/boututils/anim.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib/python3.9/site-packages/bout_runners/bout_runners.py is executable but has no shebang, removing executable bit
mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.38AnEv
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64::;' export 'MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;
~/build/BUILD/BOUT++-v4.3.2/build_mpich ~/build/BUILD/BOUT++-v4.3.2
MODULES_LMCONFLICT_modshare=mpi/mpich-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;
LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;
MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;
_LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/mpich-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;
PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64::
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/mpich-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/mpich-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/mpich/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ LD_LIBRARY_PATH_modshare=/usr/lib64/mpich/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/mpich-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/mpich-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/lib64/mpich/bin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ pushd build_mpich
+ make -j2 build-check
make --no-print-directory -C tests/integrated
make --no-print-directory -C tests/MMS
  Compiling  wave.cxx
  Compiling  test_yupdown.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_yupdown
  Compiling  testVec.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
  Linking wave
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  wave.cxx
  Linking testVec
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking wave
  Compiling  fci_mms.cxx
  Linking test-twistshift
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking fci_mms
  Compiling  diffusion.cxx
  Linking test-twistshift
  Compiling  fuu.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../..//include/dataformat.hxx:40,
                 from ../../..//include/datafile.hxx:20,
                 from ../../..//include/bout.hxx:40,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Adding fuu.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/integrated/test-subdir/fuu.a
  Compiling  bar.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../../include/dataformat.hxx:40,
                 from ../../../../include/datafile.hxx:20,
                 from ../../../../include/bout.hxx:40,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking cyto
  Adding bar.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/integrated/test-subdir/bar.a
  Compiling  subdirs.cxx
  Compiling  test_extras.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking subdirs
  Compiling  test_stopCheck.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_variant.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_stopCheck.cxx
  Compiling  sys/test_utils.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_solver.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_solver
  Compiling  sys/test_type_name.cxx
  Compiling  test_snb.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_timer.cxx
  Compiling  sys/test_range.cxx
  Linking test_snb
  Compiling  test_smooth.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_output.cxx
  Linking test_smooth
  Compiling  test_restarting.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_restarting
  Compiling  test-restart-io.cxx
  Compiling  sys/test_optionsreader.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-restart-io
  Compiling  test_region_iterator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_region_iterator
  Compiling  sys/test_options_netcdf.cxx
  Compiling  test_naulin_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_naulin_laplace
  Compiling  test_multigrid_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options_fields.cxx
  Linking test_multigrid_laplace
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
test_laplace.cxx: In function 'int main(int, char**)':
test_laplace.cxx:23:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   23 |   Field3D flag0 = invert_laplace(input, 0);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:24:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   24 |   Field3D flag3 = invert_laplace(input, 3);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:27:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   27 |   Field3D flag0a = invert_laplace(input, 0, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:28:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   28 |   Field3D flag3a = invert_laplace(input, 3, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:31:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   31 |   Field3D flag0ac = invert_laplace(input, 0, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:32:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   32 |   Field3D flag3ac = invert_laplace(input, 3, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:35:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   35 |   Field3D flag0ad = invert_laplace(input, 0, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:36:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   36 |   Field3D flag3ad = invert_laplace(input, 3, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:45:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   45 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:47:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   47 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:52:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   52 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:54:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   54 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:59:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   59 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:61:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   61 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:67:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   67 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:69:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   69 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Linking test_laplace
  Compiling  test_io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_io
  Compiling  test_invpar.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_invpar
  Compiling  invertable_operator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking invertable_operator
  Compiling  sys/test_msg_stack.cxx
  Compiling  test_interpolate.cxx
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:390,
                 from sys/test_msg_stack.cxx:4:
sys/test_msg_stack.cxx: In member function 'virtual void MsgStackTest_SetPointTest_Test::TestBody()':
sys/test_msg_stack.cxx:77:34: warning: 'int MsgStack::setPoint()' is deprecated: Please use `MsgStack::push` with an empty message instead [-Wdeprecated-declarations]
   77 |     EXPECT_EQ(msg_stack.setPoint(), i);
      |                                  ^
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:76:7: note: declared here
   76 |   int setPoint(); ///< get a message point
      |       ^~~~~~~~
  Compiling  sys/test_expressionparser.cxx
  Linking test_interpolate
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  sys/test_boutexception.cxx
  Compiling  test_gyro.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_gyro
  Compiling  src/test_bout++.cxx
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_fieldfactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solverfactory.cxx
  Linking test_fieldfactory
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solver.cxx
  Linking 2fluid
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_delp2.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_delp2
  Compiling  test_cyclic.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_cyclic
  Compiling  solver/test_fakesolver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test-coordinates-initialization.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-coordinates-initialization
  Compiling  command-args.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/dataformat.hxx:40,
                 from ../../../include/datafile.hxx:20,
                 from ../../../include/bout.hxx:40,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_paralleltransform.cxx
  Linking command-args
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_interpolation.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_coordinates.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_boutmesh.cxx
  Compiling  mesh/test_boundary_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/parallel/test_shiftedmetric.cxx
  Compiling  mesh/data/test_gridfromoptions.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert/test_fft.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_mask.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_interpolation_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_derivs.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_cyclic_reduction.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_traits.cxx
  Compiling  include/bout/test_template_combinations.cxx
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_monitor.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_macro_for_each.cxx
  Compiling  include/bout/test_generic_factory.cxx
  Compiling  include/bout/test_deriv_store.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_assert.cxx
  Compiling  include/bout/test_array.cxx
  Compiling  field/test_where.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector3d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector2d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_initialprofiles.cxx
  Compiling  field/test_fieldperp.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:445:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:445:19: note: use reference type to prevent copying
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:487:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:487:19: note: use reference type to prevent copying
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:529:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:529:19: note: use reference type to prevent copying
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_fieldperp.cxx:575:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:575:19: note: use reference type to prevent copying
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_fieldgroup.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field3d.cxx
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOX_Test::TestBody()':
field/test_field3d.cxx:549:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:549:19: note: use reference type to prevent copying
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOY_Test::TestBody()':
field/test_field3d.cxx:598:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:598:19: note: use reference type to prevent copying
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOZ_Test::TestBody()':
field/test_field3d.cxx:652:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:652:19: note: use reference type to prevent copying
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field3d.cxx:701:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:701:19: note: use reference type to prevent copying
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field3d.cxx:749:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:749:19: note: use reference type to prevent copying
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field3d.cxx:795:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:795:19: note: use reference type to prevent copying
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field3d.cxx:847:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:847:19: note: use reference type to prevent copying
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field2d.cxx
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field2d.cxx:538:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:538:19: note: use reference type to prevent copying
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field2d.cxx:581:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:581:19: note: use reference type to prevent copying
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field2d.cxx:623:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:623:19: note: use reference type to prevent copying
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field2d.cxx:668:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:668:19: note: use reference type to prevent copying
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling gtest-all.o
  Compiling bout_test_main.o
  Linking bout_test_main.a
  Linking tests
/usr/bin/ld: /tmp/ccDOKQEg.ltrans3.ltrans.o: in function `OutputTest::OutputTest()':
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ SEGFAULT_SIGNALS=segv
+ LD_PRELOAD=/usr/lib64/libSegFault.so
+ make check
  Linking tests
/usr/bin/ld: /tmp/cchprgmc.ltrans3.ltrans.o: in function `OutputTest::OutputTest()':
/builddir/build/BUILD/BOUT++-v4.3.2/build_mpich/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
Running unit test
Running main() from bout_test_main.cxx
[==========] Running 1510 tests from 104 test suites.
[----------] Global test environment set-up.
[----------] 2 tests from ParseCommandLineArgsDeathTest
[----------] 2 tests from ParseCommandLineArgsDeathTest (7 ms total)
[----------] 1 test from SignalHandlerTestDeathTest (128 ms total)
[----------] 10 tests from FieldTest (3 ms total)
[----------] 78 tests from Field2DTest (39 ms total)
[----------] 126 tests from Field3DTest (34 ms total)
[----------] 47 tests from FieldFactoryCreationTest/0 (12 ms total)
[----------] 47 tests from FieldFactoryCreationTest/1 (12 ms total)
[----------] 28 tests from FieldFactoryTest (8 ms total)
[----------] 6 tests from FieldFactoryCreateAndTransformTest (1 ms total)
[----------] 26 tests from FieldGroupTest (1 ms total)
[----------] 96 tests from FieldPerpTest (21 ms total)
[----------] 10 tests from InitialProfileTest (3 ms total)
[ RUN      ] Vector2DTest.ApplyBoundaryString
	Option input:transform_from_field_aligned = 1 (default)
[----------] 46 tests from Vector2DTest (7 ms total)
[----------] 49 tests from Vector3DTest (8 ms total)
[----------] 10 tests from WhereTest (3 ms total)
[----------] 12 tests from ArrayTest (0 ms total)
[----------] 4 tests from AssertTest (0 ms total)
[----------] 25 tests from DerivativeStoreTest (10 ms total)
[----------] 6 tests from GenericFactory (0 ms total)
[----------] 3 tests from MacroForEachTest (0 ms total)
[----------] 3 tests from MacroForEachFnTest (0 ms total)
[----------] 2 tests from MonitorTest (0 ms total)
[----------] 33 tests from RegionTest (7 ms total)
[----------] 6 tests from RegionIndexConversionTest (0 ms total)
[----------] 2 tests from RegionIndex2DTest (0 ms total)
[----------] 2 tests from RegionIndex3DTest (0 ms total)
[----------] 21 tests from RegionIndexTest/0 (1 ms total)
[----------] 21 tests from RegionIndexTest/1 (0 ms total)
[----------] 21 tests from RegionIndexTest/2 (1 ms total)
[----------] 23 tests from FieldIndexTest/0 (0 ms total)
[----------] 23 tests from FieldIndexTest/1 (0 ms total)
[----------] 48 tests from IndexOffsetTest (3 ms total)
[----------] 5 tests from TemplateCombinationsTest (0 ms total)
[----------] 6 tests from BoutTraitsTest (0 ms total)
[----------] 3 tests from CyclicReduction (0 ms total)
[----------] 9 tests from InterpolationFactoryTest (2 ms total)
[----------] 11 tests from MaskTest (4 ms total)
[----------] 34 tests from GridFromOptionsTest (129 ms total)
[----------] 9 tests from ShiftedMetricTest (2 ms total)
[----------] 5 tests from BoundaryFactoryTest (0 ms total)
[----------] 2 tests from BoutMeshTest (5 ms total)
[----------] 4 tests from CoordinatesTest (1 ms total)
[----------] 16 tests from Field3DInterpToTest (1 ms total)
[----------] 8 tests from Field2DInterpToTest (1 ms total)
[----------] 24 tests from MeshTest (2 ms total)
[----------] 6 tests from ParallelTransformTest (1 ms total)
[----------] 46 tests from SolverTest (17 ms total)
[----------] 12 tests from SolverFactoryTest (1 ms total)
[----------] 20 tests from ParseCommandLineArgs (1 ms total)
[----------] 3 tests from PrintStartupTest (0 ms total)
[----------] 4 tests from BoutInitialiseFunctions (1 ms total)
[----------] 3 tests from BoutExceptionTest (2283 ms total)
[----------] 1 test from BoutRhsFailTest (1 ms total)
[----------] 2 tests from BoutParallelRhsFailTest (0 ms total)
[----------] 1 test from BoutIterationFailTest (0 ms total)
[----------] 29 tests from ExpressionParserTest (2 ms total)
[----------] 1 test from ParseExceptionTest (0 ms total)
[----------] 11 tests from MsgStackTest (0 ms total)
[----------] 95 tests from OptionsTest (20 ms total)
[----------] 12 tests from OptionsFieldTest (3 ms total)
[----------] 12 tests from OptionsNetCDFTest (22 ms total)
[----------] 20 tests from OptionsReaderTest (3 ms total)
[----------] 20 tests from OutputTest (1 ms total)
[----------] 25 tests from RangeTest (0 ms total)
[----------] 10 tests from TimerTest (17 ms total)
[----------] 6 tests from TypeNameTest (0 ms total)
[----------] 14 tests from MatrixTest (1 ms total)
[----------] 14 tests from TensorTest (1 ms total)
[----------] 4 tests from Invert3x3Test (0 ms total)
[----------] 13 tests from NumberUtilitiesTest (1 ms total)
[----------] 18 tests from StringUtilitiesTest (1 ms total)
[----------] 4 tests from FunctionTraitsTest (0 ms total)
[----------] 3 tests from VariantTest (0 ms total)
[----------] 5 tests from FirstX/DerivativesTest (2 ms total)
[----------] 5 tests from FirstY/DerivativesTest (3 ms total)
[----------] 6 tests from FirstZ/DerivativesTest (4 ms total)
[----------] 2 tests from SecondX/DerivativesTest (1 ms total)
[----------] 2 tests from SecondY/DerivativesTest (1 ms total)
[----------] 3 tests from SecondZ/DerivativesTest (1 ms total)
[----------] 1 test from FourthX/DerivativesTest (0 ms total)
[----------] 1 test from FourthY/DerivativesTest (0 ms total)
[----------] 1 test from FourthZ/DerivativesTest (1 ms total)
[----------] 6 tests from UpwindX/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindY/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxX/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxY/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from X/FirstDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from FirstY/FirstDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from FirstZ/FirstDerivativesInterfaceTest (2 ms total)
[----------] 2 tests from X/SecondDerivativesInterfaceTest (1 ms total)
[----------] 2 tests from Y/SecondDerivativesInterfaceTest (0 ms total)
[----------] 3 tests from Z/SecondDerivativesInterfaceTest (1 ms total)
[----------] 1 test from X/FourthDerivativesInterfaceTest (1 ms total)
[----------] 1 test from Y/FourthDerivativesInterfaceTest (0 ms total)
[----------] 1 test from Z/FourthDerivativesInterfaceTest (1 ms total)
[----------] 6 tests from X/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Y/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Z/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from X/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Y/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Z/FluxDerivativesInterfaceTest (2 ms total)
[----------] 10 tests from FFTEvenAndOddSamples/FFTTest (0 ms total)
[==========] 1510 tests from 104 test suites ran. (2882 ms total)
[  PASSED  ] 1510 tests.
======= Making 53 integrated tests ========
test-yupdown                     ✓   0.013 s
test-vec                         ✓   0.013 s
test-twistshift                  ✓   0.013 s
test-twistshift-staggered        ✓   0.013 s
test-subdir                      ✓   0.033 s
test-stopCheck                   ✓   0.013 s
test-stopCheck-file              ✓   0.013 s
test-squash                      S -  all_tests => False
test-solver                      ✓   0.013 s
test-snb                         ✓   0.013 s
test-smooth                      ✓   0.013 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   0.013 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   0.013 s
test-region-iterator             ✓   0.013 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   0.013 s
test-multigrid_laplace           ✓   0.013 s
test-laplace                     ✓   0.013 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓   0.013 s
test-invpar                      ✓   0.013 s
test-invertable-operator         ✓   0.013 s
test-interpolate                 ✓   0.013 s
test-interchange-instability     ✓   0.013 s
test-initial                     S -  not make => False
test-include                     S -  all_tests => False
test-gyro                        ✓   0.013 s
test-griddata                    ✓   0.013 s
test-griddata-yboundary-guards   ✓   0.013 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  S -  not make => False
test-fieldfactory                ✓   0.013 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓   0.013 s
test-delp2                       ✓   0.013 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   0.013 s
test-coordinates-initialization  ✓   0.013 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   0.013 s
test-collect                     S -  all_tests => False
test-code-style                  S -  not make => False
test-boutcore/simple-model       S -  not make => False
test-boutcore/mms-ddz            S -  not make => False
test-boutcore/legacy-model       S -  not make => False
test-boutcore/collect            S -  not make => False
test-boutcore/collect-staggered  S -  not make => False
test-attribs                     S -  all_tests => False


======= All tests passed in 0.43 seconds =======
======= Running 53 integrated tests ========
test-yupdown                     ✓   0.574 s
test-vec                         ✓   2.342 s
test-twistshift                  ✓   0.553 s
test-twistshift-staggered        ✓   0.540 s
test-subdir                      ✓   0.447 s
test-stopCheck                   ✓   0.030 s
test-stopCheck-file              ✓   2.573 s
test-squash                      S -  all_tests => False
test-solver                      ✓  18.958 s
test-snb                         ✓   0.271 s
test-smooth                      ✓   3.615 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   3.175 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   4.978 s
test-region-iterator             ✓   1.299 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   4.508 s
test-multigrid_laplace           ✓ 591.720 s
test-laplace                     ✓   6.312 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓  49.401 s
test-invpar                      ✓  20.374 s
test-invertable-operator         ✓   1.506 s
test-interpolate                 ✓   6.009 s
test-interchange-instability     ✓  15.727 s
test-initial                     ✓  22.042 s
test-include                     S -  all_tests => False
test-gyro                        ✓   2.621 s
test-griddata                    ✓   0.528 s
test-griddata-yboundary-guards   ✓  13.086 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  ✓   1.438 s
test-fieldfactory                ✓   2.914 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓  20.080 s
test-delp2                       ✓  98.804 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   8.599 s
test-coordinates-initialization  ✓   0.897 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   2.579 s
test-collect                     S -  all_tests => False
test-code-style                  ✓   0.067 s
test-boutcore/simple-model       ✓   0.752 s
test-boutcore/mms-ddz            ✓   0.359 s
test-boutcore/legacy-model       ✓   0.666 s
test-boutcore/collect            ✓   0.459 s
test-boutcore/collect-staggered  ✓   0.443 s
test-attribs                     S -  all_tests => False


======= All tests passed in 911.27 seconds =======
======= Making 21 MMS tests ========
wave-1d           ✓   0.013 s
wave-1d-y         ✓   0.013 s
upwinding3        S -  not make => False
time              S -  all_tests => False
time-petsc        S -  not make => False
spatial/fci       ✓   0.013 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   0.013 s
derivatives3      S -  not make => False
bracket           S -  not make => False
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False


======= All tests passed in 0.06 seconds =======
======= Running 21 MMS tests ========
wave-1d           ✓   3.280 s
wave-1d-y         ✓   3.271 s
upwinding3        ✓   1.637 s
time              S -  all_tests => False
time-petsc        S -  all_tests => False
spatial/fci       ✓   7.161 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   8.938 s
derivatives3      ✓   1.190 s
bracket           ✓   0.400 s
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False


======= All tests passed in 25.88 seconds =======
+ popd
~/build/BUILD/BOUT++-v4.3.2
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval unset 'LD_LIBRARY_PATH;
unset' 'MPI_COMPILER;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' 'MPI_MAN;
unset' 'MPI_PYTHON_SITEARCH;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_HOME;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' 'MPI_SUFFIX;
unset' 'MPI_PYTHON2_SITEARCH;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ unset MPI_PYTHON2_SITEARCH
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;
MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;
MANPATH=/usr/share/man/openmpi-x86_64:;' export 'MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;
MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi;' export 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1;' export 'MANPATH_modshare;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;
MODULES_LMCONFLICT_modshare=mpi/openmpi-x86_64\&mpi:1;' export 'MODULES_LMCONFLICT_modshare;
~/build/BUILD/BOUT++-v4.3.2/build_openmpi ~/build/BUILD/BOUT++-v4.3.2
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;
MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;
LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1;' export 'LD_LIBRARY_PATH_modshare;
MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;
_LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '_LMFILES__modshare;
LOADEDMODULES_modshare=mpi/openmpi-x86_64:1;' export 'LOADEDMODULES_modshare;
MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;
PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MANPATH=/usr/share/man/openmpi-x86_64:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:2:/usr/share/man/openmpi-x86_64:1
++ export MANPATH_modshare
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MODULES_LMCONFLICT_modshare='mpi/openmpi-x86_64&mpi:1'
++ export MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/lib64/openmpi/lib/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ LD_LIBRARY_PATH_modshare=/usr/lib64/openmpi/lib:1
++ export LD_LIBRARY_PATH_modshare
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ _LMFILES__modshare=/usr/share/modulefiles/mpi/openmpi-x86_64:1
++ export _LMFILES__modshare
++ LOADEDMODULES_modshare=mpi/openmpi-x86_64:1
++ export LOADEDMODULES_modshare
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ PATH_modshare=/usr/lib64/openmpi/bin:1:/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ pushd build_openmpi
+ make -j2 build-check
make --no-print-directory -C tests/integrated
make --no-print-directory -C tests/MMS
  Compiling  wave.cxx
  Compiling  test_yupdown.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_yupdown.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_yupdown.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_yupdown
  Compiling  testVec.cxx
  Linking wave
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from testVec.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  wave.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from ../../..//include/bout/physicsmodel.hxx:40,
                 from wave.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking testVec
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking wave
  Compiling  fci_mms.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fci_mms.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fci_mms.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-twistshift
  Compiling  test-twistshift.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-twistshift.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-twistshift.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking fci_mms
  Compiling  diffusion.cxx
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../..//include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../..//include/field.hxx:41,
                 from ../../..//include/field3d.hxx:30,
                 from ../../..//include/difops.hxx:39,
                 from ../../..//include/bout.hxx:41,
                 from diffusion.cxx:1:
../../..//include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../..//include/boutcomm.hxx:33,
                 from ../../..//include/bout.hxx:39,
                 from diffusion.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-twistshift
  Compiling  fuu.cxx
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from fuu.hxx:4,
                 from fuu.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Adding fuu.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/integrated/test-subdir/fuu.a
  Compiling  bar.cxx
  Linking cyto
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../../include/field.hxx:41,
                 from ../../../../include/field3d.hxx:30,
                 from ../../../../include/difops.hxx:39,
                 from ../../../../include/bout.hxx:41,
                 from bar.cxx:1:
../../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../../include/boutcomm.hxx:33,
                 from ../../../../include/bout.hxx:39,
                 from bar.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_extras.cxx
  Adding bar.o to /builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/integrated/test-subdir/bar.a
  Compiling  subdirs.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from test_extras.hxx:12,
                 from test_extras.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from test_extras.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from subdirs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking subdirs
  Compiling  sys/test_variant.cxx
  Compiling  test_stopCheck.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/sys/variant.hxx:26,
                 from sys/test_variant.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_variant.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_utils.cxx
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from sys/test_utils.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_utils.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_stopCheck.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_stopCheck.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_stopCheck.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_stopCheck
  Compiling  test_solver.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_solver.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_type_name.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from sys/test_type_name.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_type_name.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_timer.cxx
  Linking test_solver
  Compiling  sys/test_range.cxx
  Compiling  test_snb.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/invert_parderiv.hxx:34,
                 from ../../../include/bout/snb.hxx:1,
                 from test_snb.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_output.cxx
  Linking test_snb
  Compiling  test_smooth.cxx
  Compiling  sys/test_optionsreader.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_smooth.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_smooth.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_optionsreader.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_optionsreader.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_smooth
  Compiling  test_restarting.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_restarting.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_restarting
  Compiling  sys/test_options_netcdf.cxx
  Compiling  test-restart-io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test-restart-io.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_netcdf.cxx:7:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_netcdf.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-restart-io
  Compiling  test_region_iterator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_region_iterator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_region_iterator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_options_fields.cxx
  Linking test_region_iterator
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from sys/test_options_fields.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options_fields.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_naulin_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_naulin_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_naulin_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_naulin_laplace
  Compiling  test_multigrid_laplace.cxx
  Compiling  sys/test_options.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_multigrid_laplace.cxx:26:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_multigrid_laplace.cxx:26:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_options.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_options.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_multigrid_laplace
  Compiling  test_laplace.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_laplace.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_laplace.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
test_laplace.cxx: In function 'int main(int, char**)':
test_laplace.cxx:23:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   23 |   Field3D flag0 = invert_laplace(input, 0);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:24:42: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   24 |   Field3D flag3 = invert_laplace(input, 3);
      |                                          ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:27:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   27 |   Field3D flag0a = invert_laplace(input, 0, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:28:47: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   28 |   Field3D flag3a = invert_laplace(input, 3, &a);
      |                                               ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:31:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   31 |   Field3D flag0ac = invert_laplace(input, 0, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:32:52: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   32 |   Field3D flag3ac = invert_laplace(input, 3, &a, &c);
      |                                                    ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:35:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   35 |   Field3D flag0ad = invert_laplace(input, 0, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:36:61: warning: 'const Field3D invert_laplace(const Field3D&, int, const Field2D*, const Field2D*, const Field2D*)' is deprecated [-Wdeprecated-declarations]
   36 |   Field3D flag3ad = invert_laplace(input, 3, &a, nullptr, &d);
      |                                                             ^
In file included from ../../../include/bout_types.hxx:25,
                 from ../../../include/datafile.hxx:17,
                 from ../../../include/bout.hxx:40,
                 from test_laplace.cxx:6:
../../../include/invert_laplace.hxx:284:26: note: declared here
  284 | DEPRECATED(const Field3D invert_laplace(const Field3D &b, int flags, const Field2D *a = nullptr,
      |                          ^~~~~~~~~~~~~~
../../../include/bout/deprecated.hxx:18:55: note: in definition of macro 'DEPRECATED'
   18 | #define DEPRECATED(func) __attribute__ ((deprecated)) func
      |                                                       ^~~~
test_laplace.cxx:45:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   45 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:47:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   47 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:52:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   52 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:54:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   54 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:59:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   59 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:61:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   61 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:67:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   67 |   lap->setFlags(4096);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
test_laplace.cxx:69:21: warning: 'virtual void Laplacian::setFlags(int)' is deprecated: Please use setGlobalFlags, setInnerBoundaryFlags and setOuterBoundaryFlags methods instead [-Wdeprecated-declarations]
   69 |   lap->setFlags(8192);
      |                     ^
In file included from test_laplace.cxx:7:
../../../include/invert_laplace.hxx:189:16: note: declared here
  189 |   virtual void setFlags(int f);
      |                ^~~~~~~~
  Linking test_laplace
  Compiling  test_io.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_io.cxx:10:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_io.cxx:10:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_io
  Compiling  sys/test_msg_stack.cxx
  Compiling  test_invpar.cxx
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_msg_stack.cxx:4:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_invpar.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_invpar.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:390,
                 from sys/test_msg_stack.cxx:4:
sys/test_msg_stack.cxx: In member function 'virtual void MsgStackTest_SetPointTest_Test::TestBody()':
sys/test_msg_stack.cxx:77:34: warning: 'int MsgStack::setPoint()' is deprecated: Please use `MsgStack::push` with an empty message instead [-Wdeprecated-declarations]
   77 |     EXPECT_EQ(msg_stack.setPoint(), i);
      |                                  ^
In file included from sys/test_msg_stack.cxx:5:
../../include/msg_stack.hxx:76:7: note: declared here
   76 |   int setPoint(); ///< get a message point
      |       ^~~~~~~~
  Compiling  sys/test_expressionparser.cxx
  Linking test_invpar
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_expressionparser.cxx:6:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_expressionparser.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invertable_operator.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../../include/field.hxx:34,
                 from ../../../include/fieldperp.hxx:31,
                 from ../../../include/invert_laplace.hxx:41,
                 from invertable_operator.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  sys/test_boutexception.cxx
  Linking invertable_operator
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from sys/test_boutexception.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from sys/test_boutexception.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_interpolate.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_interpolate.cxx:13:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_interpolate.cxx:13:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  src/test_bout++.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/difops.hxx:39,
                 from ../../include/bout.hxx:41,
                 from src/test_bout++.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from src/test_bout++.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_interpolate
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solverfactory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from solver/test_solverfactory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solverfactory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  test_gyro.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_gyro.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_gyro.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_solver.cxx
  Linking test_gyro
  Compiling  test_griddata.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from solver/test_solver.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_solver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_griddata.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_griddata.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_griddata.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_griddata
  Compiling  test_fieldfactory.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_fieldfactory.cxx:8:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_fieldfactory.cxx:8:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_fieldfactory
  Compiling  2fluid.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from 2fluid.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from 2fluid.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  solver/test_fakesolver.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from ../../include/bout/solver.hxx:42,
                 from solver/test_fakesolver.hxx:6,
                 from solver/test_fakesolver.cxx:1:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from solver/test_fakesolver.hxx:4,
                 from solver/test_fakesolver.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking 2fluid
  Compiling  mesh/test_paralleltransform.cxx
  Compiling  test_delp2.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/test_paralleltransform.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_paralleltransform.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from ../../../include/bout/physicsmodel.hxx:40,
                 from test_delp2.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_delp2
  Compiling  mesh/test_mesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_mesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_mesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  test_cyclic.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test_cyclic.cxx:6:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test_cyclic.cxx:6:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test_cyclic
  Compiling  mesh/test_interpolation.cxx
  Compiling  test-coordinates-initialization.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from mesh/test_interpolation.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_interpolation.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from test-coordinates-initialization.cxx:5:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from test-coordinates-initialization.cxx:5:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking test-coordinates-initialization
  Compiling  command-args.cxx
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../../include/field.hxx:41,
                 from ../../../include/field3d.hxx:30,
                 from ../../../include/difops.hxx:39,
                 from ../../../include/bout.hxx:41,
                 from command-args.cxx:2:
../../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ios:39,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:57,
                 from /usr/include/openmpi-x86_64/mpi.h:2887,
                 from ../../../include/boutcomm.hxx:33,
                 from ../../../include/bout.hxx:39,
                 from command-args.cxx:2:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Linking command-args
  Compiling  mesh/test_coordinates.cxx
  Compiling  mesh/test_boutmesh.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/../src/mesh/impls/bout/boutmesh.hxx:7,
                 from mesh/test_boutmesh.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boutmesh.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/bout/paralleltransform.hxx:10,
                 from ../../include/bout/coordinates.hxx:36,
                 from mesh/test_coordinates.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_coordinates.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/test_boundary_factory.cxx
  Compiling  mesh/parallel/test_shiftedmetric.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from ../../include/boundary_op.hxx:9,
                 from ../../include/boundary_factory.hxx:7,
                 from mesh/test_boundary_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/test_boundary_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from mesh/parallel/test_shiftedmetric.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/parallel/test_shiftedmetric.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  mesh/data/test_gridfromoptions.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/options.hxx:45,
                 from mesh/data/test_gridfromoptions.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from mesh/data/test_gridfromoptions.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  invert/test_fft.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from invert/test_fft.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from invert/test_fft.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_mask.cxx
  Compiling  include/test_interpolation_factory.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ../../include/mask.hxx:27,
                 from include/test_mask.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_mask.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from ../../include/interpolation.hxx:31,
                 from include/test_interpolation_factory.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_interpolation_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/test_derivs.cxx
  Compiling  include/test_cyclic_reduction.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field3d.hxx:30,
                 from include/test_derivs.cxx:5:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_derivs.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/cyclic_reduction.hxx:46,
                 from include/test_cyclic_reduction.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/test_cyclic_reduction.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_traits.cxx
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from include/bout/test_traits.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_traits.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_template_combinations.cxx
  Compiling  include/bout/test_region.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from include/bout/test_region.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_region.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_monitor.cxx
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/utils.hxx:38,
                 from ../../include/bout/monitor.hxx:6,
                 from include/bout/test_monitor.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_monitor.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_macro_for_each.cxx
  Compiling  include/bout/test_generic_factory.cxx
  Compiling  include/bout/test_deriv_store.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from include/bout/test_deriv_store.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from include/bout/test_deriv_store.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  include/bout/test_assert.cxx
  Compiling  include/bout/test_array.cxx
  Compiling  field/test_where.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_where.cxx:3:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_where.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector3d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector3d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector3d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_vector2d.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_vector2d.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_vector2d.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_initialprofiles.cxx
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from field/test_initialprofiles.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_initialprofiles.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_fieldperp.cxx
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:445:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:445:19: note: use reference type to prevent copying
  445 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:487:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:487:19: note: use reference type to prevent copying
  487 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_fieldperp.cxx:529:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:529:19: note: use reference type to prevent copying
  529 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_fieldperp.cxx: In member function 'virtual void FieldPerpTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_fieldperp.cxx:575:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_fieldperp.cxx:575:19: note: use reference type to prevent copying
  575 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_fieldgroup.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from ./test_extras.hxx:12,
                 from field/test_fieldgroup.cxx:2:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_fieldgroup.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field_factory.cxx
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/field.hxx:41,
                 from ../../include/field2d.hxx:34,
                 from field/test_field_factory.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field_factory.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling  field/test_field3d.cxx
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOX_Test::TestBody()':
field/test_field3d.cxx:549:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:549:19: note: use reference type to prevent copying
  549 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOY_Test::TestBody()':
field/test_field3d.cxx:598:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:598:19: note: use reference type to prevent copying
  598 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOZ_Test::TestBody()':
field/test_field3d.cxx:652:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:652:19: note: use reference type to prevent copying
  652 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field3d.cxx:701:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:701:19: note: use reference type to prevent copying
  701 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field3d.cxx:749:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:749:19: note: use reference type to prevent copying
  749 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field3d.cxx:795:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:795:19: note: use reference type to prevent copying
  795 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field3d.cxx: In member function 'virtual void Field3DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field3d.cxx:847:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field3d.cxx:847:19: note: use reference type to prevent copying
  847 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field2d.cxx
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_XGUARDS_Test::TestBody()':
field/test_field2d.cxx:538:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:538:19: note: use reference type to prevent copying
  538 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_YGUARDS_Test::TestBody()':
field/test_field2d.cxx:581:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:581:19: note: use reference type to prevent copying
  581 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_ZGUARDS_Test::TestBody()':
field/test_field2d.cxx:623:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:623:19: note: use reference type to prevent copying
  623 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
field/test_field2d.cxx: In member function 'virtual void Field2DTest_IterateOverRGN_NOCORNERS_Test::TestBody()':
field/test_field2d.cxx:668:19: warning: loop variable 'index' creates a copy from type 'const std::vector<int>' [-Wrange-loop-construct]
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
field/test_field2d.cxx:668:19: note: use reference type to prevent copying
  668 |   for (const auto index : test_indices) {
      |                   ^~~~~
      |                   &
  Compiling  field/test_field.cxx
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx: In destructor 'MsgStackItem::~MsgStackItem()':
../../include/msg_stack.hxx:147:15: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |               ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
In file included from ../../include/bout/scorepwrapper.hxx:5,
                 from ../../include/bout/deriv_store.hxx:37,
                 from ../../include/bout/mesh.hxx:49,
                 from field/test_field.cxx:4:
../../include/msg_stack.hxx:147:34: warning: 'bool std::uncaught_exception()' is deprecated [-Wdeprecated-declarations]
  147 |     if (!std::uncaught_exception()) {
      |                                  ^
In file included from /usr/include/c++/11/ext/concurrence.h:34,
                 from /usr/include/c++/11/bits/shared_ptr_base.h:62,
                 from /usr/include/c++/11/bits/shared_ptr.h:53,
                 from /usr/include/c++/11/memory:77,
                 from ../../externalpackages/googletest/googletest/include/gtest/gtest.h:57,
                 from field/test_field.cxx:1:
/usr/include/c++/11/exception:106:8: note: declared here
  106 |   bool uncaught_exception() _GLIBCXX_USE_NOEXCEPT __attribute__ ((__pure__));
      |        ^~~~~~~~~~~~~~~~~~
  Compiling gtest-all.o
  Compiling bout_test_main.o
  Linking bout_test_main.a
  Linking tests
/usr/bin/ld: /tmp/cceL968t.ltrans3.ltrans.o: in function `OutputTest::OutputTest() [clone .lto_priv.0]':
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ SEGFAULT_SIGNALS=segv
+ LD_PRELOAD=/usr/lib64/libSegFault.so
+ make check
  Linking tests
/usr/bin/ld: /tmp/ccrZcEbP.ltrans3.ltrans.o: in function `OutputTest::OutputTest() [clone .lto_priv.0]':
/builddir/build/BUILD/BOUT++-v4.3.2/build_openmpi/tests/unit/sys/test_output.cxx:11: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
Running unit test
Running main() from bout_test_main.cxx
[==========] Running 1510 tests from 104 test suites.
[----------] Global test environment set-up.
[----------] 2 tests from ParseCommandLineArgsDeathTest
[----------] 2 tests from ParseCommandLineArgsDeathTest (8 ms total)
[----------] 1 test from SignalHandlerTestDeathTest (615 ms total)
[----------] 10 tests from FieldTest (2 ms total)
[----------] 78 tests from Field2DTest (514 ms total)
[----------] 126 tests from Field3DTest (35 ms total)
[----------] 47 tests from FieldFactoryCreationTest/0 (12 ms total)
[----------] 47 tests from FieldFactoryCreationTest/1 (12 ms total)
[----------] 28 tests from FieldFactoryTest (8 ms total)
[----------] 6 tests from FieldFactoryCreateAndTransformTest (1 ms total)
[----------] 26 tests from FieldGroupTest (1 ms total)
[----------] 96 tests from FieldPerpTest (21 ms total)
[----------] 10 tests from InitialProfileTest (3 ms total)
[ RUN      ] Vector2DTest.ApplyBoundaryString
	Option input:transform_from_field_aligned = 1 (default)
[----------] 46 tests from Vector2DTest (7 ms total)
[----------] 49 tests from Vector3DTest (9 ms total)
[----------] 10 tests from WhereTest (2 ms total)
[----------] 12 tests from ArrayTest (0 ms total)
[----------] 4 tests from AssertTest (1 ms total)
[----------] 25 tests from DerivativeStoreTest (9 ms total)
[----------] 6 tests from GenericFactory (0 ms total)
[----------] 3 tests from MacroForEachTest (0 ms total)
[----------] 3 tests from MacroForEachFnTest (0 ms total)
[----------] 2 tests from MonitorTest (1 ms total)
[----------] 33 tests from RegionTest (6 ms total)
[----------] 6 tests from RegionIndexConversionTest (0 ms total)
[----------] 2 tests from RegionIndex2DTest (1 ms total)
[----------] 2 tests from RegionIndex3DTest (0 ms total)
[----------] 21 tests from RegionIndexTest/0 (0 ms total)
[----------] 21 tests from RegionIndexTest/1 (0 ms total)
[----------] 21 tests from RegionIndexTest/2 (0 ms total)
[----------] 23 tests from FieldIndexTest/0 (1 ms total)
[----------] 23 tests from FieldIndexTest/1 (0 ms total)
[----------] 48 tests from IndexOffsetTest (3 ms total)
[----------] 5 tests from TemplateCombinationsTest (0 ms total)
[----------] 6 tests from BoutTraitsTest (0 ms total)
[----------] 3 tests from CyclicReduction (1 ms total)
[----------] 9 tests from InterpolationFactoryTest (2 ms total)
[----------] 11 tests from MaskTest (3 ms total)
[----------] 34 tests from GridFromOptionsTest (131 ms total)
[----------] 9 tests from ShiftedMetricTest (1 ms total)
[----------] 5 tests from BoundaryFactoryTest (0 ms total)
[----------] 2 tests from BoutMeshTest (5 ms total)
[----------] 4 tests from CoordinatesTest (1 ms total)
[----------] 16 tests from Field3DInterpToTest (0 ms total)
[----------] 8 tests from Field2DInterpToTest (0 ms total)
[----------] 24 tests from MeshTest (2 ms total)
[----------] 6 tests from ParallelTransformTest (1 ms total)
[----------] 46 tests from SolverTest (17 ms total)
[----------] 12 tests from SolverFactoryTest (1 ms total)
[----------] 20 tests from ParseCommandLineArgs (0 ms total)
[----------] 3 tests from PrintStartupTest (0 ms total)
[----------] 4 tests from BoutInitialiseFunctions (1 ms total)
[----------] 3 tests from BoutExceptionTest (2598 ms total)
[----------] 1 test from BoutRhsFailTest (0 ms total)
[----------] 2 tests from BoutParallelRhsFailTest (1 ms total)
[----------] 1 test from BoutIterationFailTest (0 ms total)
[----------] 29 tests from ExpressionParserTest (1 ms total)
[----------] 1 test from ParseExceptionTest (0 ms total)
[----------] 11 tests from MsgStackTest (1 ms total)
[----------] 95 tests from OptionsTest (20 ms total)
[----------] 12 tests from OptionsFieldTest (2 ms total)
[----------] 12 tests from OptionsNetCDFTest (22 ms total)
[----------] 20 tests from OptionsReaderTest (3 ms total)
[----------] 20 tests from OutputTest (1 ms total)
[----------] 25 tests from RangeTest (0 ms total)
[----------] 10 tests from TimerTest (17 ms total)
[----------] 6 tests from TypeNameTest (0 ms total)
[----------] 14 tests from MatrixTest (1 ms total)
[----------] 14 tests from TensorTest (1 ms total)
[----------] 4 tests from Invert3x3Test (0 ms total)
[----------] 13 tests from NumberUtilitiesTest (1 ms total)
[----------] 18 tests from StringUtilitiesTest (0 ms total)
[----------] 4 tests from FunctionTraitsTest (0 ms total)
[----------] 3 tests from VariantTest (0 ms total)
[----------] 5 tests from FirstX/DerivativesTest (3 ms total)
[----------] 5 tests from FirstY/DerivativesTest (3 ms total)
[----------] 6 tests from FirstZ/DerivativesTest (5 ms total)
[----------] 2 tests from SecondX/DerivativesTest (1 ms total)
[----------] 2 tests from SecondY/DerivativesTest (0 ms total)
[----------] 3 tests from SecondZ/DerivativesTest (2 ms total)
[----------] 1 test from FourthX/DerivativesTest (0 ms total)
[----------] 1 test from FourthY/DerivativesTest (0 ms total)
[----------] 1 test from FourthZ/DerivativesTest (1 ms total)
[----------] 6 tests from UpwindX/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindY/DerivativesTestAdvection (2 ms total)
[----------] 6 tests from UpwindZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxX/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxY/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from FluxZ/DerivativesTestAdvection (2 ms total)
[----------] 5 tests from X/FirstDerivativesInterfaceTest (1 ms total)
[----------] 5 tests from FirstY/FirstDerivativesInterfaceTest (1 ms total)
[----------] 6 tests from FirstZ/FirstDerivativesInterfaceTest (2 ms total)
[----------] 2 tests from X/SecondDerivativesInterfaceTest (0 ms total)
[----------] 2 tests from Y/SecondDerivativesInterfaceTest (1 ms total)
[----------] 3 tests from Z/SecondDerivativesInterfaceTest (1 ms total)
[----------] 1 test from X/FourthDerivativesInterfaceTest (0 ms total)
[----------] 1 test from Y/FourthDerivativesInterfaceTest (1 ms total)
[----------] 1 test from Z/FourthDerivativesInterfaceTest (0 ms total)
[----------] 6 tests from X/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Y/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 6 tests from Z/UpwindDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from X/FluxDerivativesInterfaceTest (2 ms total)
[----------] 5 tests from Y/FluxDerivativesInterfaceTest (1 ms total)
[----------] 5 tests from Z/FluxDerivativesInterfaceTest (2 ms total)
[----------] 10 tests from FFTEvenAndOddSamples/FFTTest (1 ms total)
[==========] 1510 tests from 104 test suites ran. (4159 ms total)
[  PASSED  ] 1510 tests.
======= Making 53 integrated tests ========
test-yupdown                     ✓   0.013 s
test-vec                         ✓   0.013 s
test-twistshift                  ✓   0.013 s
test-twistshift-staggered        ✓   0.013 s
test-subdir                      ✓   0.033 s
test-stopCheck                   ✓   0.013 s
test-stopCheck-file              ✓   0.013 s
test-squash                      S -  all_tests => False
test-solver                      ✓   0.013 s
test-snb                         ✓   0.013 s
test-smooth                      ✓   0.013 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   0.013 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   0.013 s
test-region-iterator             ✓   0.013 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   0.013 s
test-multigrid_laplace           ✓   0.013 s
test-laplace                     ✓   0.013 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓   0.013 s
test-invpar                      ✓   0.013 s
test-invertable-operator         ✓   0.013 s
test-interpolate                 ✓   0.013 s
test-interchange-instability     ✓   0.013 s
test-initial                     S -  not make => False
test-include                     S -  all_tests => False
test-gyro                        ✓   0.013 s
test-griddata                    ✓   0.013 s
test-griddata-yboundary-guards   ✓   0.013 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  S -  not make => False
test-fieldfactory                ✓   0.013 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓   0.013 s
test-delp2                       ✓   0.013 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓   0.013 s
test-coordinates-initialization  ✓   0.013 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   0.013 s
test-collect                     S -  all_tests => False
test-code-style                  S -  not make => False
test-boutcore/simple-model       S -  not make => False
test-boutcore/mms-ddz            S -  not make => False
test-boutcore/legacy-model       S -  not make => False
test-boutcore/collect            S -  not make => False
test-boutcore/collect-staggered  S -  not make => False
test-attribs                     S -  all_tests => False


======= All tests passed in 0.43 seconds =======
======= Running 53 integrated tests ========
test-yupdown                     ✓   1.109 s
test-vec                         ✓   2.163 s
test-twistshift                  ✓   1.084 s
test-twistshift-staggered        ✓   1.073 s
test-subdir                      ✓   0.983 s
test-stopCheck                   ✓   0.032 s
test-stopCheck-file              ✓   6.766 s
test-squash                      S -  all_tests => False
test-solver                      ✓  19.521 s
test-snb                         ✓   0.815 s
test-smooth                      ✓   5.285 s
test-slepc-solver                S -  slepc => False
test-restarting                  ✓   5.881 s
test-restart-io_hdf5             S -  all_tests => False
test-restart-io                  ✓   6.391 s
test-region-iterator             ✓   2.377 s
test-petsc_laplace_MAST-grid     S -  all_tests => False
test-petsc_laplace               S -  all_tests => False
test-options-netcdf              S -  False => False
test-naulin-laplace              ✓   4.339 s
test-multigrid_laplace           ✓   7.653 s
test-laplace                     ✓   8.607 s
test-io_hdf5                     S -  all_tests => False
test-io                          ✓  57.611 s
test-invpar                      ✓  30.928 s
test-invertable-operator         ✓   2.521 s
test-interpolate                 ✓  12.411 s
test-interchange-instability     ✓  17.221 s
test-initial                     ✓  25.287 s
test-include                     S -  all_tests => False
test-gyro                        ✓   3.909 s
test-griddata                    ✓   1.068 s
test-griddata-yboundary-guards   ✓  13.262 s
test-fieldgroupComm              S -  all_tests => False
test-fieldgroup                  ✓   1.368 s
test-fieldfactory                ✓   4.097 s
test-drift-instability           S -  all_tests => False
test-drift-instability-staggered ✓  21.821 s
test-delp2                       ✓  25.091 s
test-datadir                     S -  all_tests => False
test-cyclic                      ✓  13.877 s
test-coordinates-initialization  ✓   0.862 s
test-compile-examples            S -  all_tests => False
test-compile-examples-petsc      S -  all_tests => False
test-command-args                ✓   8.054 s
test-collect                     S -  all_tests => False
test-code-style                  ✓   0.067 s
test-boutcore/simple-model       ✓   1.300 s
test-boutcore/mms-ddz            ✓   0.895 s
test-boutcore/legacy-model       ✓   1.206 s
test-boutcore/collect            ✓   0.995 s
test-boutcore/collect-staggered  ✓   0.987 s
test-attribs                     S -  all_tests => False


======= All tests passed in 318.94 seconds =======
======= Making 21 MMS tests ========
wave-1d           ✓   0.013 s
wave-1d-y         ✓   0.013 s
upwinding3        S -  not make => False
time              S -  all_tests => False
time-petsc        S -  not make => False
spatial/fci       ✓   0.013 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓   0.013 s
derivatives3      S -  not make => False
bracket           S -  not make => False
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False


======= All tests passed in 0.06 seconds =======
======= Running 21 MMS tests ========
wave-1d           ✓   6.498 s
wave-1d-y         ✓   6.520 s
upwinding3        ✓   2.194 s
time              S -  all_tests => False
time-petsc        S -  all_tests => False
spatial/fci       ✓  12.916 s
spatial/diffusion S -  all_tests => False
spatial/d2dz2     S -  all_tests => False
spatial/d2dx2     S -  all_tests => False
spatial/advection S -  all_tests => False
laplace           S -  all_tests => False
hw                S -  all_tests => False
diffusion2        S -  all_tests => False
diffusion         ✓  21.437 s
derivatives3      ✓   1.646 s
bracket           ✓   0.945 s
advection         S -  all_tests => False
advection/weno3   S -  all_tests => False
advection/upwind  S -  all_tests => False
advection/central S -  all_tests => False
advection/arakawa S -  all_tests => False


======= All tests passed in 52.16 seconds =======
+ popd
~/build/BUILD/BOUT++-v4.3.2
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
++++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval 'module() {
   unset _mlshdbg;
   if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '\''1'\'' ]; then
      case "$-" in
         *v*x*) set +vx; _mlshdbg='\''vx'\'' ;;
         *v*) set +v; _mlshdbg='\''v'\'' ;;
         *x*) set +x; _mlshdbg='\''x'\'' ;;
         *) _mlshdbg='\'''\'' ;;
      esac;
   fi;
   unset _mlre _mlIFS;
   if [ -n "${IFS+x}" ]; then
      _mlIFS=$IFS;
   fi;
   IFS='\'' '\'';
   for _mlv in ${MODULES_RUN_QUARANTINE:-}; do
      if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
         if [ -n "`eval '\''echo ${'\''$_mlv'\''+x}'\''`" ]; then
            _mlre="${_mlre:-}${_mlv}_modquar='\''`eval '\''echo ${'\''$_mlv'\''}'\''`'\'' ";
         fi;
         _mlrv="MODULES_RUNENV_${_mlv}";
         _mlre="${_mlre:-}${_mlv}='\''`eval '\''echo ${'\''$_mlrv'\'':-}'\''`'\'' ";
      fi;
   done;
   if [ -n "${_mlre:-}" ]; then
      eval `eval ${_mlre} /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '\''"$@"'\''`;
   else
      eval `/usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh "$@"`;
   fi;
   _mlstatus=$?;
   if [ -n "${_mlIFS+x}" ]; then
      IFS=$_mlIFS;
   else
      unset IFS;
   fi;
   unset _mlre _mlv _mlrv _mlIFS;
   if [ -n "${_mlshdbg:-}" ]; then
      set -$_mlshdbg;
   fi;
   unset _mlshdbg;
   return $_mlstatus;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' 0 = 1 ']'
+++ '[' /bin/sh '!=' '' ']'
+++ '[' -t 2 ']'
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ '[' /bin/sh '!=' '' ']'
+++ export -f switchml
+++ case ":$PATH:" in
+++ '[' '!' -n x ']'
+++ case ":`manpath 2>/dev/null`:" in
++++ manpath
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/openmpi/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_PRELOAD = LD_PRELOAD -a LD_PRELOAD = LD_PRELOAD ']'
++ eval 'echo ${LD_PRELOAD+x}'
+++ echo
+ '[' -n '' ']'
+ _mlrv=MODULES_RUNENV_LD_PRELOAD
++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/openmpi/lib
+++ LD_LIBRARY_PATH=
+++ LD_PRELOAD=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval unset 'MPI_COMPILER;
unset' 'LD_LIBRARY_PATH;
unset' 'MPI_MAN;
MANPATH=;' export 'MANPATH;
unset' 'MPI_INCLUDE;
unset' '_LMFILES_;
unset' 'LOADEDMODULES;
unset' 'MODULES_LMCONFLICT;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;
MANPATH_modshare=:1;' export 'MANPATH_modshare;
unset' 'MPI_PYTHON3_SITEARCH;
unset' 'MODULES_LMCONFLICT_modshare;
PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1;' export 'PKG_CONFIG_PATH_modshare;
unset' 'MPI_HOME;
unset' 'MPI_FORTRAN_MOD_DIR;
unset' 'MPI_SUFFIX;
unset' 'LD_LIBRARY_PATH_modshare;
unset' 'MPI_SYSCONFIG;
unset' '_LMFILES__modshare;
unset' 'LOADEDMODULES_modshare;
unset' 'MPI_LIB;
PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;
unset' 'MPI_BIN;
PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1;' export 'PATH_modshare;
test' '0;'
Processing files: bout++-mpich-4.3.2-4.fc34.x86_64
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ unset MPI_MAN
++ MANPATH=
++ export MANPATH
++ unset MPI_INCLUDE
++ unset _LMFILES_
++ unset LOADEDMODULES
++ unset MODULES_LMCONFLICT
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MANPATH_modshare=:1
++ export MANPATH_modshare
++ unset MPI_PYTHON3_SITEARCH
++ unset MODULES_LMCONFLICT_modshare
++ PKG_CONFIG_PATH_modshare=:1:/usr/lib64/pkgconfig:1:/usr/share/pkgconfig:1
++ export PKG_CONFIG_PATH_modshare
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_SUFFIX
++ unset LD_LIBRARY_PATH_modshare
++ unset MPI_SYSCONFIG
++ unset _LMFILES__modshare
++ unset LOADEDMODULES_modshare
++ unset MPI_LIB
++ PATH=/builddir/.local/bin:/builddir/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ PATH_modshare=/bin:1:/usr/sbin:1:/usr/bin:1:/builddir/.local/bin:1:/builddir/bin:1:/usr/local/sbin:1:/usr/share/Modules/bin:1:/sbin:1
++ export PATH_modshare
++ test 0
+ _mlstatus=0
+ '[' -n x ']'
+ IFS=' 	
'
+ unset _mlre _mlv _mlrv _mlIFS
+ '[' -n '' ']'
+ unset _mlshdbg
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.k4cvPm
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Z8rafz
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-mpich = 4.3.2-4.fc34 bout++-mpich(x86-64) = 4.3.2-4.fc34 bundled(libpvode) libbout++.so.4.3.1()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Recommends: environment-modules
Processing files: bout++-mpich-devel-4.3.2-4.fc34.x86_64
Provides: bout++-mpich-devel = 4.3.2-4.fc34 bout++-mpich-devel(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.4.3.1()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel
Processing files: python3-bout++-mpich-4.3.2-4.fc34.x86_64
Provides: python-bout++-mpich = 4.3.2-4.fc34 python3-bout++-mpich = 4.3.2-4.fc34 python3-bout++-mpich(x86-64) = 4.3.2-4.fc34 python3.9-bout++-mpich = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.103()(64bit)(mpich-x86_64) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.15()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.14()(64bit)(mpich-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.4()(64bit)(mpich-x86_64) libsundials_cvode.so.5()(64bit)(mpich-x86_64) libsundials_ida.so.5()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.5()(64bit)(mpich-x86_64) python(abi) = 3.9 rtld(GNU_HASH)
Obsoletes: python-bout++-mpich < 4.3.2-4.fc34
Processing files: bout++-openmpi-4.3.2-4.fc34.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.8p3CyA
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2X03GB
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-openmpi = 4.3.2-4.fc34 bout++-openmpi(x86-64) = 4.3.2-4.fc34 bundled(libpvode) libbout++.so.4.3.1()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Recommends: environment-modules
Processing files: bout++-openmpi-devel-4.3.2-4.fc34.x86_64
Provides: bout++-openmpi-devel = 4.3.2-4.fc34 bout++-openmpi-devel(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.4.3.1()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel
Processing files: python3-bout++-openmpi-4.3.2-4.fc34.x86_64
Provides: python-bout++-openmpi = 4.3.2-4.fc34 python3-bout++-openmpi = 4.3.2-4.fc34 python3-bout++-openmpi(x86-64) = 4.3.2-4.fc34 python3.9-bout++-openmpi = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.103()(64bit)(openmpi-x86_64) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.15()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.14()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.4()(64bit)(openmpi-x86_64) libsundials_cvode.so.5()(64bit)(openmpi-x86_64) libsundials_ida.so.5()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.5()(64bit)(openmpi-x86_64) python(abi) = 3.9 rtld(GNU_HASH)
Obsoletes: python-bout++-openmpi < 4.3.2-4.fc34
Processing files: bout++-common-4.3.2-4.fc34.x86_64
Provides: bout++-common = 4.3.2-4.fc34 bout++-common(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-bout++-4.3.2-4.fc34.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.VtD754
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ DOCDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr README.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CITATION.bib /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CITATION.cff /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CHANGELOG.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ cp -pr CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/doc/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.luLrfA
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ cp -pr LICENSE /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ cp -pr LICENSE.GPL /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64/usr/share/licenses/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-bout++ = 4.3.2-4.fc34 python-bout_runners = 4.3.2-4.fc34 python-boutdata = 4.3.2-4.fc34 python-boututils = 4.3.2-4.fc34 python-zoidberg = 4.3.2-4.fc34 python3-bout++ = 4.3.2-4.fc34 python3-bout_runners python3-boutdata python3-boututils python3-zoidberg python3.9-bout++ = 4.3.2-4.fc34 python3.9-bout_runners = 4.3.2-4.fc34 python3.9-boutdata = 4.3.2-4.fc34 python3.9-boututils = 4.3.2-4.fc34 python3.9-zoidberg = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.9
Obsoletes: python-bout++ < 4.3.2-4.fc34 python-bout_runners < 4.3.2-4.fc34 python-boutdata < 4.3.2-4.fc34 python-boututils < 4.3.2-4.fc34 python-zoidberg < 4.3.2-4.fc34
Recommends: python3-matplotlib python3-scipy
Processing files: bout++-doc-4.3.2-4.fc34.noarch
Provides: bout++-doc = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debugsource-4.3.2-4.fc34.x86_64
Provides: bout++-debugsource = 4.3.2-4.fc34 bout++-debugsource(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-debuginfo = 4.3.2-4.fc34 bout++-debuginfo(x86-64) = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-mpich-debuginfo = 4.3.2-4.fc34 bout++-mpich-debuginfo(x86-64) = 4.3.2-4.fc34 debuginfo(build-id) = 1cd1f50477f3d48eee28715c57991e25d0e86b05 debuginfo(build-id) = 44bbe8bbe034c6ced637bba7c3a26ae24a7d0d72 debuginfo(build-id) = be9ed6d113341bcd65c6af492704aa9813a9fa3d
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: python3-bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64
Provides: debuginfo(build-id) = bfc2121bd075349e22de391e7e69233196aa3cec python-bout++-mpich-debuginfo = 4.3.2-4.fc34 python3-bout++-mpich-debuginfo = 4.3.2-4.fc34 python3-bout++-mpich-debuginfo(x86-64) = 4.3.2-4.fc34 python3.9-bout++-mpich-debuginfo = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64
Provides: bout++-openmpi-debuginfo = 4.3.2-4.fc34 bout++-openmpi-debuginfo(x86-64) = 4.3.2-4.fc34 debuginfo(build-id) = 03d96ffc99f57548d6dc8ae7f241ca6e1c98b36e debuginfo(build-id) = 3f948c32c16770856777dccc99c32e7187f1d2ca debuginfo(build-id) = cec127a7d69a86b1ce99abe5a7a6515fb9b0d963
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Processing files: python3-bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64
Provides: debuginfo(build-id) = 12b52740fabb9a5fb0f465d35db44bccd5de979a python-bout++-openmpi-debuginfo = 4.3.2-4.fc34 python3-bout++-openmpi-debuginfo = 4.3.2-4.fc34 python3-bout++-openmpi-debuginfo(x86-64) = 4.3.2-4.fc34 python3.9-bout++-openmpi-debuginfo = 4.3.2-4.fc34
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 4.3.2-4.fc34
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debugsource-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-doc-4.3.2-4.fc34.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debuginfo-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-4.3.2-4.fc34.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-devel-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-common-4.3.2-4.fc34.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-devel-4.3.2-4.fc34.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.RI45iD
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v4.3.2
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/bout++-4.3.2-4.fc34.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild bout++-4.3.2-4.fc34.src.rpm
Finish: build phase for bout++-4.3.2-4.fc34.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1610893728.649060/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/bout++-4.3.2-4.fc34.src.rpm) Config(child) 74 minutes 40 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run