Warning: Permanently added '18.209.29.149' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1410947 --chroot fedora-rawhide-x86_64 --detached Version: 0.38 Task: {'build_id': 1410947, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': '1383f8528c07e4474f20d4fae0871d0e6f3b913d', 'git_repo': 'dormouse/Cython-3.0_py38/python-lfpy', 'memory_reqs': 2048, 'package_name': 'python-lfpy', 'package_version': '2.0.7-6.fc31', 'project_dirname': 'Cython-3.0_py38', 'project_name': 'Cython-3.0_py38', 'project_owner': 'dormouse', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dormouse/Cython-3.0_py38/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'dormouse/Cython-3.0_py38--https://src.fedoraproject.org/user/churchyard', 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-lfpy.git', 'committish': '1383f8528c07e4474f20d4fae0871d0e6f3b913d'}, 'source_type': 8, 'submitter': 'https://src.fedoraproject.org/user/churchyard', 'task_id': '1410947-fedora-rawhide-x86_64', 'timeout': 86400, 'use_bootstrap_container': False, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-lfpy.git /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-lfpy.git', '/tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy'... Running: git checkout 1383f8528c07e4474f20d4fae0871d0e6f3b913d cmd: ['git', 'checkout', '1383f8528c07e4474f20d4fae0871d0e6f3b913d'] cwd: /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy rc: 0 stdout: stderr: Note: switching to '1383f8528c07e4474f20d4fae0871d0e6f3b913d'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 1383f85 automatic import of python-lfpy Running: cp -r . /tmp/copr-rpmbuild-xi7l4_g5 cmd: ['cp', '-r', '.', '/tmp/copr-rpmbuild-xi7l4_g5'] cwd: /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/.config/rpkg.conf Running: rpkg -C /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/.config/rpkg.conf sources --outdir /tmp/copr-rpmbuild-xi7l4_g5 cmd: ['rpkg', '-C', '/tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/.config/rpkg.conf', 'sources', '--outdir', '/tmp/copr-rpmbuild-xi7l4_g5'] cwd: /tmp/copr-rpmbuild-xi7l4_g5/obtain-sources/python-lfpy rc: 0 stdout: Downloading LFPy-2.0.7.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=86400): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-xi7l4_g5/python-lfpy.spec --sources /tmp/copr-rpmbuild-xi7l4_g5 --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1590472896.755402 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-xi7l4_g5/python-lfpy.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1590472896.755402/root. INFO: calling preinit hooks INFO: enabled root cache INFO: /var/lib/copr-rpmbuild/results/configs/child.cfg newer than root cache; cache will be rebuilt INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 28 kB/s | 3.7 kB 00:00 Copr repository 12 MB/s | 1.0 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 9.6 kB/s | 3.8 kB 00:00 fedora 68 kB/s | 12 kB 00:00 Dependencies resolved. ============================================================================================================================================== Package Arch Version Repository Size ============================================================================================================================================== Installing group/module packages: 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3.8-8.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19 k qt5-srpm-macros  noarch 5.14.2-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k readline  x86_64 8.0-4.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207 k rpm  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503 k rpm-build-libs  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k rpm-libs  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 332 k rust-srpm-macros  noarch 15-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.7 k setup  noarch 2.13.6-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k sqlite-libs  x86_64 3.32.0-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 614 k systemd-libs  x86_64 245.5-2.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 558 k tzdata  noarch 2020a-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 430 k xxhash-libs  x86_64 0.7.3-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29 k xz-libs  x86_64 5.2.5-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90 k zip  x86_64 3.0-26.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 260 k zlib  x86_64 1.2.11-21.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k zstd  x86_64 1.4.5-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 601 k Installing Groups: Buildsystem building group Transaction Summary ============================================================================================================================================== Install 144 Packages Total size: 57 M Installed size: 229 M Downloading Packages: [SKIPPED] alternatives-1.11-6.fc32.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-9.fc32.noarch.rpm: Already downloaded [SKIPPED] bash-5.0.11-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.34.0-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.34.0-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2020.2.40-3.fc32.noarch.rpm: Already downloaded [SKIPPED] coreutils-8.32-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-8.32-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.6-22.fc32.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20200312-1.git3ae59d2.fc33.noarch.rpm: Already downloaded [SKIPPED] curl-7.70.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.27-5.fc33.x86_64.rpm: Already 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redhat-rpm-config-155-1.fc33.noarch.rpm: Already downloaded [SKIPPED] rpm-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rust-srpm-macros-15-1.fc33.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] setup-2.13.6-2.fc32.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.8.1-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.32.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] tar-1.32-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2020a-1.fc33.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-47.fc32.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.35.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-19.fc33.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.7.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-26.fc32.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.11-21.fc32.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.4.5-3.fc33.x86_64.rpm: Already downloaded Running transaction check warning: Generating 18 missing index(es), please wait... Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.14-2.fc32.x86_64 1/1 Preparing : 1/1 Installing : libgcc-10.1.1-1.fc33.x86_64 1/144 Running scriptlet: libgcc-10.1.1-1.fc33.x86_64 1/144 Installing : fedora-release-identity-basic-33-0.8.noarch 2/144 Installing : tzdata-2020a-1.fc33.noarch 3/144 Installing : rust-srpm-macros-15-1.fc33.noarch 4/144 Installing : qt5-srpm-macros-5.14.2-3.fc33.noarch 5/144 Installing : publicsuffix-list-dafsa-20190417-3.fc32.noarch 6/144 Installing : pkgconf-m4-1.7.0-1.fc33.noarch 7/144 Installing : perl-srpm-macros-1-34.fc32.noarch 8/144 Installing : pcre2-syntax-10.35-1.fc33.noarch 9/144 Installing : openblas-srpm-macros-2-7.fc32.noarch 10/144 Installing : ocaml-srpm-macros-6-2.fc32.noarch 11/144 Installing : nim-srpm-macros-3-2.fc32.noarch 12/144 Installing : ncurses-base-6.2-1.20200222.fc33.noarch 13/144 Installing : libssh-config-0.9.4-2.fc33.noarch 14/144 Installing : gnat-srpm-macros-4-11.fc32.noarch 15/144 Installing : 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67/144 Installing : tar-2:1.32-4.fc32.x86_64 68/144 Installing : zip-3.0-26.fc32.x86_64 69/144 Installing : libpsl-0.21.0-4.fc32.x86_64 70/144 Installing : dwz-0.13-2.fc32.x86_64 71/144 Installing : gc-8.0.4-3.fc32.x86_64 72/144 Installing : zstd-1.4.5-3.fc33.x86_64 73/144 Installing : libxml2-2.9.10-4.fc33.x86_64 74/144 Installing : bzip2-1.0.8-2.fc32.x86_64 75/144 Installing : elfutils-default-yama-scope-0.179-2.fc33.noarch 76/144 Running scriptlet: elfutils-default-yama-scope-0.179-2.fc33.noarch 76/144 Installing : elfutils-libs-0.179-2.fc33.x86_64 77/144 Installing : elfutils-0.179-2.fc33.x86_64 78/144 Installing : ncurses-6.2-1.20200222.fc33.x86_64 79/144 Installing : cpio-2.13-5.fc33.x86_64 80/144 Installing : diffutils-3.7-4.fc32.x86_64 81/144 Installing : expat-2.2.8-2.fc32.x86_64 82/144 Installing : libmetalink-0.1.3-10.fc32.x86_64 83/144 Installing : keyutils-libs-1.6-4.fc32.x86_64 84/144 Installing : libbrotli-1.0.7-10.fc32.x86_64 85/144 Installing : libgomp-10.1.1-1.fc33.x86_64 86/144 Installing : libgpg-error-1.37-1.fc33.x86_64 87/144 Installing : libgcrypt-1.8.5-6.fc33.x86_64 88/144 Installing : libnghttp2-1.40.0-2.fc32.x86_64 89/144 Installing : libpkgconf-1.7.0-1.fc33.x86_64 90/144 Installing : pkgconf-1.7.0-1.fc33.x86_64 91/144 Installing : pkgconf-pkg-config-1.7.0-1.fc33.x86_64 92/144 Installing : gmp-1:6.2.0-1.fc33.x86_64 93/144 Installing : mpfr-4.0.2-4.fc33.x86_64 94/144 Installing : libsigsegv-2.11-10.fc32.x86_64 95/144 Installing : gawk-5.0.1-7.fc32.x86_64 96/144 Installing : libsmartcols-2.35.2-1.fc33.x86_64 97/144 Installing : libtasn1-4.16.0-1.fc32.x86_64 98/144 Installing : p11-kit-trust-0.23.20-1.fc32.x86_64 99/144 Running scriptlet: p11-kit-trust-0.23.20-1.fc32.x86_64 99/144 Installing : libtool-ltdl-2.4.6-34.fc33.x86_64 100/144 Installing : libverto-0.3.0-9.fc32.x86_64 101/144 Installing : pcre-8.44-1.fc33.x86_64 102/144 Installing : grep-3.4-1.fc33.x86_64 103/144 Installing : xz-5.2.5-1.fc33.x86_64 104/144 Installing : xxhash-libs-0.7.3-1.fc33.x86_64 105/144 Installing : gdb-minimal-9.1-6.fc33.x86_64 106/144 Installing : coreutils-common-8.32-6.fc33.x86_64 107/144 Installing : openssl-libs-1:1.1.1g-6.fc33.x86_64 108/144 Installing : coreutils-8.32-6.fc33.x86_64 109/144 Installing : crypto-policies-20200312-1.git3ae59d2.fc33.noarc 110/144 Running scriptlet: ca-certificates-2020.2.40-3.fc32.noarch 111/144 Installing : ca-certificates-2020.2.40-3.fc32.noarch 111/144 Running scriptlet: ca-certificates-2020.2.40-3.fc32.noarch 111/144 Installing : krb5-libs-1.18.1-6.fc33.x86_64 112/144 Installing : libblkid-2.35.2-1.fc33.x86_64 113/144 Running scriptlet: libblkid-2.35.2-1.fc33.x86_64 113/144 Installing : libtirpc-1.2.6-0.fc33.x86_64 114/144 Installing : binutils-gold-2.34.0-5.fc33.x86_64 115/144 Installing : binutils-2.34.0-5.fc33.x86_64 116/144 Running scriptlet: binutils-2.34.0-5.fc33.x86_64 116/144 Installing : gzip-1.10-2.fc32.x86_64 117/144 Installing : cracklib-2.9.6-22.fc32.x86_64 118/144 Installing : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 119/144 Installing : libpwquality-1.4.2-2.fc32.x86_64 120/144 Installing : pam-1.3.1-26.fc33.x86_64 121/144 Installing : libfdisk-2.35.2-1.fc33.x86_64 122/144 Installing : libmount-2.35.2-1.fc33.x86_64 123/144 Installing : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 124/144 Installing : openldap-2.4.47-4.fc32.x86_64 125/144 Installing : libssh-0.9.4-2.fc33.x86_64 126/144 Installing : libcurl-7.70.0-1.fc33.x86_64 127/144 Installing : curl-7.70.0-1.fc33.x86_64 128/144 Installing : guile22-2.2.6-4.fc32.x86_64 129/144 Running scriptlet: guile22-2.2.6-4.fc32.x86_64 129/144 Installing : systemd-libs-245.5-2.fc33.x86_64 130/144 Running scriptlet: systemd-libs-245.5-2.fc33.x86_64 130/144 Installing : libarchive-3.4.3-1.fc33.x86_64 131/144 Installing : rpm-4.15.90-0.git14971.12.fc33.x86_64 132/144 Installing : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 133/144 Installing : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 134/144 Installing : efi-srpm-macros-4-4.fc32.noarch 135/144 Installing : fonts-srpm-macros-1:2.0.5-3.fc33.noarch 136/144 Installing : go-srpm-macros-3.0.8-5.fc32.noarch 137/144 Installing : python-srpm-macros-3.8-8.fc33.noarch 138/144 Installing : redhat-rpm-config-155-1.fc33.noarch 139/144 Installing : rpm-build-4.15.90-0.git14971.12.fc33.x86_64 140/144 Installing : util-linux-2.35.2-1.fc33.x86_64 141/144 Running scriptlet: util-linux-2.35.2-1.fc33.x86_64 141/144 Installing : make-1:4.3-1.fc33.x86_64 142/144 Installing : info-6.7-7.fc33.x86_64 143/144 Installing : which-2.21-19.fc33.x86_64 144/144 Running scriptlet: filesystem-3.14-2.fc32.x86_64 144/144 Running scriptlet: rpm-4.15.90-0.git14971.12.fc33.x86_64 144/144 Running scriptlet: which-2.21-19.fc33.x86_64 144/144 Verifying : alternatives-1.11-6.fc32.x86_64 1/144 Verifying : audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_ 2/144 Verifying : basesystem-11-9.fc32.noarch 3/144 Verifying : bash-5.0.11-2.fc32.x86_64 4/144 Verifying : binutils-2.34.0-5.fc33.x86_64 5/144 Verifying : binutils-gold-2.34.0-5.fc33.x86_64 6/144 Verifying : bzip2-1.0.8-2.fc32.x86_64 7/144 Verifying : bzip2-libs-1.0.8-2.fc32.x86_64 8/144 Verifying : ca-certificates-2020.2.40-3.fc32.noarch 9/144 Verifying : coreutils-8.32-6.fc33.x86_64 10/144 Verifying : coreutils-common-8.32-6.fc33.x86_64 11/144 Verifying : cpio-2.13-5.fc33.x86_64 12/144 Verifying : cracklib-2.9.6-22.fc32.x86_64 13/144 Verifying : crypto-policies-20200312-1.git3ae59d2.fc33.noarc 14/144 Verifying : curl-7.70.0-1.fc33.x86_64 15/144 Verifying : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 16/144 Verifying : diffutils-3.7-4.fc32.x86_64 17/144 Verifying : dwz-0.13-2.fc32.x86_64 18/144 Verifying : efi-srpm-macros-4-4.fc32.noarch 19/144 Verifying : elfutils-0.179-2.fc33.x86_64 20/144 Verifying : elfutils-default-yama-scope-0.179-2.fc33.noarch 21/144 Verifying : elfutils-libelf-0.179-2.fc33.x86_64 22/144 Verifying : elfutils-libs-0.179-2.fc33.x86_64 23/144 Verifying : expat-2.2.8-2.fc32.x86_64 24/144 Verifying : fedora-gpg-keys-33-0.5.noarch 25/144 Verifying : fedora-release-33-0.8.noarch 26/144 Verifying : fedora-release-common-33-0.8.noarch 27/144 Verifying : fedora-release-identity-basic-33-0.8.noarch 28/144 Verifying : fedora-repos-33-0.5.noarch 29/144 Verifying : fedora-repos-rawhide-33-0.5.noarch 30/144 Verifying : file-5.38-3.fc33.x86_64 31/144 Verifying : file-libs-5.38-3.fc33.x86_64 32/144 Verifying : filesystem-3.14-2.fc32.x86_64 33/144 Verifying : findutils-1:4.7.0-4.fc33.x86_64 34/144 Verifying : fonts-srpm-macros-1:2.0.5-3.fc33.noarch 35/144 Verifying : fpc-srpm-macros-1.3-1.fc32.noarch 36/144 Verifying : gawk-5.0.1-7.fc32.x86_64 37/144 Verifying : gc-8.0.4-3.fc32.x86_64 38/144 Verifying : gdb-minimal-9.1-6.fc33.x86_64 39/144 Verifying : ghc-srpm-macros-1.5.0-2.fc32.noarch 40/144 Verifying : glibc-2.31.9000-13.fc33.x86_64 41/144 Verifying : glibc-common-2.31.9000-13.fc33.x86_64 42/144 Verifying : glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 43/144 Verifying : gmp-1:6.2.0-1.fc33.x86_64 44/144 Verifying : gnat-srpm-macros-4-11.fc32.noarch 45/144 Verifying : go-srpm-macros-3.0.8-5.fc32.noarch 46/144 Verifying : grep-3.4-1.fc33.x86_64 47/144 Verifying : guile22-2.2.6-4.fc32.x86_64 48/144 Verifying : gzip-1.10-2.fc32.x86_64 49/144 Verifying : info-6.7-7.fc33.x86_64 50/144 Verifying : keyutils-libs-1.6-4.fc32.x86_64 51/144 Verifying : krb5-libs-1.18.1-6.fc33.x86_64 52/144 Verifying : libacl-2.2.53-5.fc32.x86_64 53/144 Verifying : libarchive-3.4.3-1.fc33.x86_64 54/144 Verifying : libattr-2.4.48-8.fc32.x86_64 55/144 Verifying : libblkid-2.35.2-1.fc33.x86_64 56/144 Verifying : libbrotli-1.0.7-10.fc32.x86_64 57/144 Verifying : libcap-2.26-7.fc32.x86_64 58/144 Verifying : libcap-ng-0.7.10-2.fc32.x86_64 59/144 Verifying : libcom_err-1.45.6-2.fc33.x86_64 60/144 Verifying : libcurl-7.70.0-1.fc33.x86_64 61/144 Verifying : libdb-5.3.28-40.fc32.x86_64 62/144 Verifying : libfdisk-2.35.2-1.fc33.x86_64 63/144 Verifying : libffi-3.1-25.fc33.x86_64 64/144 Verifying : libgcc-10.1.1-1.fc33.x86_64 65/144 Verifying : libgcrypt-1.8.5-6.fc33.x86_64 66/144 Verifying : libgomp-10.1.1-1.fc33.x86_64 67/144 Verifying : libgpg-error-1.37-1.fc33.x86_64 68/144 Verifying : libidn2-2.3.0-2.fc32.x86_64 69/144 Verifying : libmetalink-0.1.3-10.fc32.x86_64 70/144 Verifying : libmount-2.35.2-1.fc33.x86_64 71/144 Verifying : libnghttp2-1.40.0-2.fc32.x86_64 72/144 Verifying : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 73/144 Verifying : libpkgconf-1.7.0-1.fc33.x86_64 74/144 Verifying : libpsl-0.21.0-4.fc32.x86_64 75/144 Verifying : libpwquality-1.4.2-2.fc32.x86_64 76/144 Verifying : libselinux-3.0-4.fc33.x86_64 77/144 Verifying : libsemanage-3.0-3.fc32.x86_64 78/144 Verifying : libsepol-3.0-3.fc32.x86_64 79/144 Verifying : libsigsegv-2.11-10.fc32.x86_64 80/144 Verifying : libsmartcols-2.35.2-1.fc33.x86_64 81/144 Verifying : libssh-0.9.4-2.fc33.x86_64 82/144 Verifying : libssh-config-0.9.4-2.fc33.noarch 83/144 Verifying : libstdc++-10.1.1-1.fc33.x86_64 84/144 Verifying : libtasn1-4.16.0-1.fc32.x86_64 85/144 Verifying : libtirpc-1.2.6-0.fc33.x86_64 86/144 Verifying : libtool-ltdl-2.4.6-34.fc33.x86_64 87/144 Verifying : libunistring-0.9.10-7.fc32.x86_64 88/144 Verifying : libutempter-1.1.6-18.fc32.x86_64 89/144 Verifying : libuuid-2.35.2-1.fc33.x86_64 90/144 Verifying : libverto-0.3.0-9.fc32.x86_64 91/144 Verifying : libxcrypt-4.4.16-3.fc33.x86_64 92/144 Verifying : libxml2-2.9.10-4.fc33.x86_64 93/144 Verifying : libzstd-1.4.5-3.fc33.x86_64 94/144 Verifying : lua-libs-5.3.5-7.fc32.x86_64 95/144 Verifying : lz4-libs-1.9.1-2.fc32.x86_64 96/144 Verifying : make-1:4.3-1.fc33.x86_64 97/144 Verifying : mpfr-4.0.2-4.fc33.x86_64 98/144 Verifying : ncurses-6.2-1.20200222.fc33.x86_64 99/144 Verifying : ncurses-base-6.2-1.20200222.fc33.noarch 100/144 Verifying : ncurses-libs-6.2-1.20200222.fc33.x86_64 101/144 Verifying : nim-srpm-macros-3-2.fc32.noarch 102/144 Verifying : ocaml-srpm-macros-6-2.fc32.noarch 103/144 Verifying : openblas-srpm-macros-2-7.fc32.noarch 104/144 Verifying : openldap-2.4.47-4.fc32.x86_64 105/144 Verifying : openssl-libs-1:1.1.1g-6.fc33.x86_64 106/144 Verifying : p11-kit-0.23.20-1.fc32.x86_64 107/144 Verifying : p11-kit-trust-0.23.20-1.fc32.x86_64 108/144 Verifying : pam-1.3.1-26.fc33.x86_64 109/144 Verifying : patch-2.7.6-12.fc32.x86_64 110/144 Verifying : pcre-8.44-1.fc33.x86_64 111/144 Verifying : pcre2-10.35-1.fc33.x86_64 112/144 Verifying : pcre2-syntax-10.35-1.fc33.noarch 113/144 Verifying : perl-srpm-macros-1-34.fc32.noarch 114/144 Verifying : pkgconf-1.7.0-1.fc33.x86_64 115/144 Verifying : pkgconf-m4-1.7.0-1.fc33.noarch 116/144 Verifying : pkgconf-pkg-config-1.7.0-1.fc33.x86_64 117/144 Verifying : popt-1.16-19.fc32.x86_64 118/144 Verifying : publicsuffix-list-dafsa-20190417-3.fc32.noarch 119/144 Verifying : python-srpm-macros-3.8-8.fc33.noarch 120/144 Verifying : qt5-srpm-macros-5.14.2-3.fc33.noarch 121/144 Verifying : readline-8.0-4.fc32.x86_64 122/144 Verifying : redhat-rpm-config-155-1.fc33.noarch 123/144 Verifying : rpm-4.15.90-0.git14971.12.fc33.x86_64 124/144 Verifying : rpm-build-4.15.90-0.git14971.12.fc33.x86_64 125/144 Verifying : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 126/144 Verifying : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 127/144 Verifying : rust-srpm-macros-15-1.fc33.noarch 128/144 Verifying : sed-4.8-1.fc33.x86_64 129/144 Verifying : setup-2.13.6-2.fc32.noarch 130/144 Verifying : shadow-utils-2:4.8.1-3.fc33.x86_64 131/144 Verifying : sqlite-libs-3.32.0-1.fc33.x86_64 132/144 Verifying : systemd-libs-245.5-2.fc33.x86_64 133/144 Verifying : tar-2:1.32-4.fc32.x86_64 134/144 Verifying : tzdata-2020a-1.fc33.noarch 135/144 Verifying : unzip-6.0-47.fc32.x86_64 136/144 Verifying : util-linux-2.35.2-1.fc33.x86_64 137/144 Verifying : which-2.21-19.fc33.x86_64 138/144 Verifying : xxhash-libs-0.7.3-1.fc33.x86_64 139/144 Verifying : xz-5.2.5-1.fc33.x86_64 140/144 Verifying : xz-libs-5.2.5-1.fc33.x86_64 141/144 Verifying : zip-3.0-26.fc32.x86_64 142/144 Verifying : zlib-1.2.11-21.fc32.x86_64 143/144 Verifying : zstd-1.4.5-3.fc33.x86_64 144/144 Installed: alternatives-1.11-6.fc32.x86_64 audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64 basesystem-11-9.fc32.noarch bash-5.0.11-2.fc32.x86_64 binutils-2.34.0-5.fc33.x86_64 binutils-gold-2.34.0-5.fc33.x86_64 bzip2-1.0.8-2.fc32.x86_64 bzip2-libs-1.0.8-2.fc32.x86_64 ca-certificates-2020.2.40-3.fc32.noarch coreutils-8.32-6.fc33.x86_64 coreutils-common-8.32-6.fc33.x86_64 cpio-2.13-5.fc33.x86_64 cracklib-2.9.6-22.fc32.x86_64 crypto-policies-20200312-1.git3ae59d2.fc33.noarch curl-7.70.0-1.fc33.x86_64 cyrus-sasl-lib-2.1.27-5.fc33.x86_64 diffutils-3.7-4.fc32.x86_64 dwz-0.13-2.fc32.x86_64 efi-srpm-macros-4-4.fc32.noarch elfutils-0.179-2.fc33.x86_64 elfutils-default-yama-scope-0.179-2.fc33.noarch elfutils-libelf-0.179-2.fc33.x86_64 elfutils-libs-0.179-2.fc33.x86_64 expat-2.2.8-2.fc32.x86_64 fedora-gpg-keys-33-0.5.noarch fedora-release-33-0.8.noarch fedora-release-common-33-0.8.noarch fedora-release-identity-basic-33-0.8.noarch fedora-repos-33-0.5.noarch fedora-repos-rawhide-33-0.5.noarch file-5.38-3.fc33.x86_64 file-libs-5.38-3.fc33.x86_64 filesystem-3.14-2.fc32.x86_64 findutils-1:4.7.0-4.fc33.x86_64 fonts-srpm-macros-1:2.0.5-3.fc33.noarch fpc-srpm-macros-1.3-1.fc32.noarch gawk-5.0.1-7.fc32.x86_64 gc-8.0.4-3.fc32.x86_64 gdb-minimal-9.1-6.fc33.x86_64 ghc-srpm-macros-1.5.0-2.fc32.noarch glibc-2.31.9000-13.fc33.x86_64 glibc-common-2.31.9000-13.fc33.x86_64 glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 gmp-1:6.2.0-1.fc33.x86_64 gnat-srpm-macros-4-11.fc32.noarch go-srpm-macros-3.0.8-5.fc32.noarch grep-3.4-1.fc33.x86_64 guile22-2.2.6-4.fc32.x86_64 gzip-1.10-2.fc32.x86_64 info-6.7-7.fc33.x86_64 keyutils-libs-1.6-4.fc32.x86_64 krb5-libs-1.18.1-6.fc33.x86_64 libacl-2.2.53-5.fc32.x86_64 libarchive-3.4.3-1.fc33.x86_64 libattr-2.4.48-8.fc32.x86_64 libblkid-2.35.2-1.fc33.x86_64 libbrotli-1.0.7-10.fc32.x86_64 libcap-2.26-7.fc32.x86_64 libcap-ng-0.7.10-2.fc32.x86_64 libcom_err-1.45.6-2.fc33.x86_64 libcurl-7.70.0-1.fc33.x86_64 libdb-5.3.28-40.fc32.x86_64 libfdisk-2.35.2-1.fc33.x86_64 libffi-3.1-25.fc33.x86_64 libgcc-10.1.1-1.fc33.x86_64 libgcrypt-1.8.5-6.fc33.x86_64 libgomp-10.1.1-1.fc33.x86_64 libgpg-error-1.37-1.fc33.x86_64 libidn2-2.3.0-2.fc32.x86_64 libmetalink-0.1.3-10.fc32.x86_64 libmount-2.35.2-1.fc33.x86_64 libnghttp2-1.40.0-2.fc32.x86_64 libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 libpkgconf-1.7.0-1.fc33.x86_64 libpsl-0.21.0-4.fc32.x86_64 libpwquality-1.4.2-2.fc32.x86_64 libselinux-3.0-4.fc33.x86_64 libsemanage-3.0-3.fc32.x86_64 libsepol-3.0-3.fc32.x86_64 libsigsegv-2.11-10.fc32.x86_64 libsmartcols-2.35.2-1.fc33.x86_64 libssh-0.9.4-2.fc33.x86_64 libssh-config-0.9.4-2.fc33.noarch libstdc++-10.1.1-1.fc33.x86_64 libtasn1-4.16.0-1.fc32.x86_64 libtirpc-1.2.6-0.fc33.x86_64 libtool-ltdl-2.4.6-34.fc33.x86_64 libunistring-0.9.10-7.fc32.x86_64 libutempter-1.1.6-18.fc32.x86_64 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qt5-srpm-macros-5.14.2-3.fc33.noarch readline-8.0-4.fc32.x86_64 redhat-rpm-config-155-1.fc33.noarch rpm-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 rust-srpm-macros-15-1.fc33.noarch sed-4.8-1.fc33.x86_64 setup-2.13.6-2.fc32.noarch shadow-utils-2:4.8.1-3.fc33.x86_64 sqlite-libs-3.32.0-1.fc33.x86_64 systemd-libs-245.5-2.fc33.x86_64 tar-2:1.32-4.fc32.x86_64 tzdata-2020a-1.fc33.noarch unzip-6.0-47.fc32.x86_64 util-linux-2.35.2-1.fc33.x86_64 which-2.21-19.fc33.x86_64 xxhash-libs-0.7.3-1.fc33.x86_64 xz-5.2.5-1.fc33.x86_64 xz-libs-5.2.5-1.fc33.x86_64 zip-3.0-26.fc32.x86_64 zlib-1.2.11-21.fc32.x86_64 zstd-1.4.5-3.fc33.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Wrote: /builddir/build/SRPMS/python-lfpy-2.0.7-6.fc33.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1590472896.755402/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1590472896.755402/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1590472896.755402/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-xi7l4_g5/python-lfpy.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=86400): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/python-lfpy-2.0.7-6.fc33.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1590472920.299246 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/python-lfpy-2.0.7-6.fc33.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1590472920.299246/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 163 kB/s | 3.7 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 11 kB/s | 3.8 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 13 MB/s | 57 MB 00:04 fedora 244 kB/s | 13 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for python-lfpy-2.0.7-6.fc33.src.rpm Start: build setup for python-lfpy-2.0.7-6.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Wrote: /builddir/build/SRPMS/python-lfpy-2.0.7-6.fc33.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 154 kB/s | 3.7 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 11 kB/s | 3.8 kB 00:00 fedora 203 kB/s | 12 kB 00:00 Dependencies resolved. ===================================================================================================================================== Package Arch Version Repository Size ===================================================================================================================================== Installing: gcc  x86_64 10.1.1-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30 M libtool  x86_64 2.4.6-34.fc33 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1.0 MB/s | 2.6 MB 00:02 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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: python3-attrs-19.3.0-2.fc32.noarch 142/191 Installing : python3-more-itertools-7.2.0-4.fc32.noarch 143/191 Installing : python3-pluggy-0.13.0-2.fc32.noarch 144/191 Installing : python3-py-1.8.0-8.fc32.noarch 145/191 Installing : python3-pyparsing-2.4.7-1.fc33.noarch 146/191 Installing : python3-packaging-20.3-1.fc33.noarch 147/191 Installing : python3-rpm-generators-11-6.fc33.noarch 148/191 Installing : python3-devel-3.8.3-1.fc33.x86_64 149/191 Installing : python3-numpy-f2py-1:1.18.4-2.fc33.x86_64 150/191 Installing : python3-wcwidth-0.1.9-1.fc33.noarch 151/191 Installing : emacs-filesystem-1:26.3-3.fc33.noarch 152/191 Installing : autoconf-2.69-33.fc33.noarch 153/191 Installing : automake-1.16.2-1.fc33.noarch 154/191 Installing : acl-2.2.53-5.fc32.x86_64 155/191 Installing : device-mapper-1.02.171-1.fc33.x86_64 156/191 Installing : device-mapper-libs-1.02.171-1.fc33.x86_64 157/191 Installing : cryptsetup-libs-2.3.2-1.fc33.x86_64 158/191 Installing : dbus-1:1.12.16-5.fc33.x86_64 159/191 Installing : systemd-pam-245.5-2.fc33.x86_64 160/191 Running scriptlet: systemd-245.5-2.fc33.x86_64 161/191 Installing : systemd-245.5-2.fc33.x86_64 161/191 Running scriptlet: systemd-245.5-2.fc33.x86_64 161/191 /var/tmp/rpm-tmp.PBwIV2: line 1: 248432 Segmentation fault (core dumped) systemd-machine-id-setup &> /dev/null /var/tmp/rpm-tmp.PBwIV2: line 21: 248435 Segmentation fault (core dumped) systemctl daemon-reexec &> /dev/null /var/tmp/rpm-tmp.PBwIV2: line 23: 248443 Segmentation fault (core dumped) journalctl --update-catalog &> /dev/null /var/tmp/rpm-tmp.PBwIV2: line 24: 248450 Segmentation fault (core dumped) systemd-tmpfiles --create &> /dev/null /var/tmp/rpm-tmp.PBwIV2: line 50: 248463 Segmentation fault (core dumped) systemctl preset-all &> /dev/null /var/tmp/rpm-tmp.PBwIV2: line 50: 248470 Segmentation fault (core dumped) systemctl --global preset-all &> /dev/null Installing : dbus-common-1:1.12.16-5.fc33.noarch 162/191 Running scriptlet: dbus-common-1:1.12.16-5.fc33.noarch 162/191 /var/tmp/rpm-tmp.2nn7g5: line 6: 248483 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset dbus.socket /var/tmp/rpm-tmp.2nn7g5: line 13: 248486 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset \--global dbus.socket Running scriptlet: dbus-broker-23-2.fc33.x86_64 163/191 Installing : dbus-broker-23-2.fc33.x86_64 163/191 Running scriptlet: dbus-broker-23-2.fc33.x86_64 163/191 /var/tmp/rpm-tmp.fd6fP5: line 6: 248515 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset dbus-broker.service /var/tmp/rpm-tmp.fd6fP5: line 13: 248518 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset \--global dbus-broker.service Running scriptlet: systemd-udev-245.5-2.fc33.x86_64 164/191 Installing : systemd-udev-245.5-2.fc33.x86_64 164/191 Running scriptlet: systemd-udev-245.5-2.fc33.x86_64 164/191 /var/tmp/rpm-tmp.kAthx4: line 13: 248548 Segmentation fault (core dumped) udevadm hwdb --update &> /dev/null /var/tmp/rpm-tmp.kAthx4: line 19: 248551 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset systemd-udev{d,-settle,-trigger}.service systemd-udevd-{control,kernel}.socket systemd-timesyncd.service /var/tmp/rpm-tmp.kAthx4: line 21: 248558 Segmentation fault (core dumped) /usr/lib/systemd/systemd-random-seed save 2>&1 Installing : infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_6 165/191 Installing : libfido2-1.4.0-1.fc33.x86_64 166/191 Installing : openssh-clients-8.2p1-3.fc33.x86_64 167/191 Installing : libkcapi-1.2.0-1.fc33.x86_64 168/191 Installing : libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 169/191 Installing : dracut-050-26.git20200316.fc33.x86_64 170/191 Installing : rdma-core-29.0-1.fc33.x86_64 171/191 Running scriptlet: rdma-core-29.0-1.fc33.x86_64 171/191 /var/tmp/rpm-tmp.7fsT71: line 1: 248571 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=infiniband --action=change /var/tmp/rpm-tmp.7fsT71: line 2: 248574 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=net --action=change /var/tmp/rpm-tmp.7fsT71: line 3: 248581 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=infiniband_mad --action=change Installing : libibverbs-29.0-1.fc33.x86_64 172/191 Installing : librdmacm-29.0-1.fc33.x86_64 173/191 Installing : libfabric-1.10.1-1.fc33.x86_64 174/191 Installing : orangefs-2.9.7-8.fc33.x86_64 175/191 Installing : libibumad-29.0-1.fc33.x86_64 176/191 Installing : opensm-libs-3.3.23-1.fc33.x86_64 177/191 Installing : openmpi-4.0.4-0.2.rc1.fc33.x86_64 178/191 Installing : python3-openmpi-4.0.4-0.2.rc1.fc33.x86_64 179/191 Installing : python3-mpi4py-openmpi-3.0.3-2.fc33.x86_64 180/191 Installing : openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 181/191 Installing : libtool-2.4.6-34.fc33.x86_64 182/191 Installing : python3-pytest-4.6.10-1.fc33.noarch 183/191 Installing : python3-scipy-1.4.1-2.fc33.x86_64 184/191 Installing : python3-mpi4py-mpich-3.0.3-2.fc33.x86_64 185/191 Installing : neuron-devel-7.7.2-4.fc33.x86_64 186/191 Installing : python3-neuron-7.7.2-4.fc33.x86_64 187/191 Installing : python3-h5py-2.10.0-1.fc33.x86_64 188/191 Installing : mpich-devel-3.3.2-4.fc33.x86_64 189/191 Installing : python3-Cython-3.0~a3-2.fc33.x86_64 190/191 Installing : annobin-9.21-1.fc33.x86_64 191/191 Running scriptlet: annobin-9.21-1.fc33.x86_64 191/191 Verifying : libibumad-29.0-1.fc33.x86_64 1/191 Verifying : libibverbs-29.0-1.fc33.x86_64 2/191 Verifying : librdmacm-29.0-1.fc33.x86_64 3/191 Verifying : python3-Cython-3.0~a3-2.fc33.x86_64 4/191 Verifying : python3-scipy-1.4.1-2.fc33.x86_64 5/191 Verifying : rdma-core-29.0-1.fc33.x86_64 6/191 Verifying : Lmod-8.3.13-1.fc33.x86_64 7/191 Verifying : acl-2.2.53-5.fc32.x86_64 8/191 Verifying : annobin-9.21-1.fc33.x86_64 9/191 Verifying : autoconf-2.69-33.fc33.noarch 10/191 Verifying : automake-1.16.2-1.fc33.noarch 11/191 Verifying : cpp-10.1.1-1.fc33.x86_64 12/191 Verifying : cryptsetup-libs-2.3.2-1.fc33.x86_64 13/191 Verifying : dbus-1:1.12.16-5.fc33.x86_64 14/191 Verifying : dbus-broker-23-2.fc33.x86_64 15/191 Verifying : dbus-common-1:1.12.16-5.fc33.noarch 16/191 Verifying : device-mapper-1.02.171-1.fc33.x86_64 17/191 Verifying : device-mapper-libs-1.02.171-1.fc33.x86_64 18/191 Verifying : dracut-050-26.git20200316.fc33.x86_64 19/191 Verifying : emacs-filesystem-1:26.3-3.fc33.noarch 20/191 Verifying : gcc-10.1.1-1.fc33.x86_64 21/191 Verifying : gcc-gfortran-10.1.1-1.fc33.x86_64 22/191 Verifying : gdbm-libs-1:1.18.1-3.fc32.x86_64 23/191 Verifying : glibc-devel-2.31.9000-13.fc33.x86_64 24/191 Verifying : glibc-headers-x86-2.31.9000-13.fc33.noarch 25/191 Verifying : gnutls-3.6.13-4.fc33.x86_64 26/191 Verifying : groff-base-1.22.4-1.fc33.x86_64 27/191 Verifying : hdf5-1.10.5-6.fc32.x86_64 28/191 Verifying : hwdata-0.335-1.fc33.noarch 29/191 Verifying : hwloc-libs-2.0.4-3.fc32.x86_64 30/191 Verifying : infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_6 31/191 Verifying : iptables-libs-1.8.4-7.fc33.x86_64 32/191 Verifying : isl-0.16.1-10.fc32.x86_64 33/191 Verifying : iv-0-0.2.20191117git08c48bb.fc32.x86_64 34/191 Verifying : json-c-0.14-5.fc33.x86_64 35/191 Verifying : kbd-2.2.0-3.fc33.x86_64 36/191 Verifying : kbd-legacy-2.2.0-3.fc33.noarch 37/191 Verifying : kbd-misc-2.2.0-3.fc33.noarch 38/191 Verifying : kernel-headers-5.7.0-0.rc7.git0.1.fc33.x86_64 39/191 Verifying : kmod-27-2.fc33.x86_64 40/191 Verifying : kmod-libs-27-2.fc33.x86_64 41/191 Verifying : libICE-1.0.10-3.fc32.x86_64 42/191 Verifying : libSM-1.2.3-5.fc32.x86_64 43/191 Verifying : libX11-1.6.9-3.fc32.x86_64 44/191 Verifying : libX11-common-1.6.9-3.fc32.noarch 45/191 Verifying : libXau-1.0.9-3.fc32.x86_64 46/191 Verifying : libXext-1.3.4-3.fc32.x86_64 47/191 Verifying : libXt-1.2.0-1.fc32.x86_64 48/191 Verifying : libaec-1.0.4-3.fc32.x86_64 49/191 Verifying : libargon2-20171227-4.fc32.x86_64 50/191 Verifying : libcbor-0.5.0-7.fc33.x86_64 51/191 Verifying : libedit-3.1-32.20191231cvs.fc32.x86_64 52/191 Verifying : libevent-2.1.8-8.fc32.x86_64 53/191 Verifying : libfabric-1.10.1-1.fc33.x86_64 54/191 Verifying : libfido2-1.4.0-1.fc33.x86_64 55/191 Verifying : libgfortran-10.1.1-1.fc33.x86_64 56/191 Verifying : libkcapi-1.2.0-1.fc33.x86_64 57/191 Verifying : libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 58/191 Verifying : liblzf-3.6-19.fc32.x86_64 59/191 Verifying : libmnl-1.0.4-11.fc32.x86_64 60/191 Verifying : libmpc-1.1.0-8.fc32.x86_64 61/191 Verifying : libnetfilter_conntrack-1.0.7-4.fc32.x86_64 62/191 Verifying : libnfnetlink-1.0.1-17.fc32.x86_64 63/191 Verifying : libnl3-3.5.0-2.fc32.x86_64 64/191 Verifying : libpcap-14:1.9.1-3.fc33.x86_64 65/191 Verifying : libpsm2-11.2.86-4.fc32.x86_64 66/191 Verifying : libquadmath-10.1.1-1.fc33.x86_64 67/191 Verifying : libquadmath-devel-10.1.1-1.fc33.x86_64 68/191 Verifying : libseccomp-2.4.2-3.fc32.x86_64 69/191 Verifying : libtool-2.4.6-34.fc33.x86_64 70/191 Verifying : libxcb-1.13.1-4.fc32.x86_64 71/191 Verifying : libxcrypt-devel-4.4.16-3.fc33.x86_64 72/191 Verifying : lua-5.3.5-7.fc32.x86_64 73/191 Verifying : lua-filesystem-1.6.3-12.fc32.x86_64 74/191 Verifying : lua-json-1.3.2-14.fc32.noarch 75/191 Verifying : lua-lpeg-1.0.2-2.fc32.x86_64 76/191 Verifying : lua-posix-33.3.1-16.fc32.x86_64 77/191 Verifying : lua-term-0.07-10.fc32.x86_64 78/191 Verifying : m4-1.4.18-12.fc32.x86_64 79/191 Verifying : mpi4py-common-3.0.3-2.fc33.noarch 80/191 Verifying : mpich-3.3.2-4.fc33.x86_64 81/191 Verifying : mpich-devel-3.3.2-4.fc33.x86_64 82/191 Verifying : munge-libs-0.5.13-7.fc32.x86_64 83/191 Verifying : ncurses-c++-libs-6.2-1.20200222.fc33.x86_64 84/191 Verifying : ncurses-devel-6.2-1.20200222.fc33.x86_64 85/191 Verifying : nettle-3.6-1.fc33.x86_64 86/191 Verifying : neuron-7.7.2-4.fc33.x86_64 87/191 Verifying : neuron-devel-7.7.2-4.fc33.x86_64 88/191 Verifying : numactl-libs-2.0.12-4.fc32.x86_64 89/191 Verifying : openblas-0.3.9-2.fc33.x86_64 90/191 Verifying : openblas-threads-0.3.9-2.fc33.x86_64 91/191 Verifying : openmpi-4.0.4-0.2.rc1.fc33.x86_64 92/191 Verifying : openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 93/191 Verifying : opensm-libs-3.3.23-1.fc33.x86_64 94/191 Verifying : openssh-8.2p1-3.fc33.x86_64 95/191 Verifying : openssh-clients-8.2p1-3.fc33.x86_64 96/191 Verifying : orangefs-2.9.7-8.fc33.x86_64 97/191 Verifying : pciutils-3.6.4-1.fc33.x86_64 98/191 Verifying : pciutils-libs-3.6.4-1.fc33.x86_64 99/191 Verifying : perl-B-1.76-453.fc33.x86_64 100/191 Verifying : perl-Carp-1.50-440.fc32.noarch 101/191 Verifying : perl-Class-Struct-0.65-453.fc33.noarch 102/191 Verifying : perl-Data-Dumper-2.174-443.fc32.x86_64 103/191 Verifying : perl-DynaLoader-1.45-453.fc33.x86_64 104/191 Verifying : perl-Encode-4:3.06-445.fc33.x86_64 105/191 Verifying : perl-Errno-1.30-453.fc33.x86_64 106/191 Verifying : perl-Exporter-5.74-2.fc32.noarch 107/191 Verifying : perl-Fcntl-1.13-453.fc33.x86_64 108/191 Verifying : perl-File-Basename-2.85-453.fc33.noarch 109/191 Verifying : perl-File-Compare-1.100.600-453.fc33.noarch 110/191 Verifying : perl-File-Copy-2.34-453.fc33.noarch 111/191 Verifying : perl-File-Find-1.36-453.fc33.noarch 112/191 Verifying : perl-File-Path-2.16-440.fc32.noarch 113/191 Verifying : perl-File-Temp-1:0.230.900-440.fc32.noarch 114/191 Verifying : perl-File-stat-1.08-453.fc33.noarch 115/191 Verifying : perl-Getopt-Long-1:2.51-2.fc32.noarch 116/191 Verifying : perl-Getopt-Std-1.12-453.fc33.noarch 117/191 Verifying : perl-HTTP-Tiny-0.076-440.fc32.noarch 118/191 Verifying : perl-IO-1.40-453.fc33.x86_64 119/191 Verifying : perl-IPC-Open3-1.20-453.fc33.noarch 120/191 Verifying : perl-MIME-Base64-3.15-440.fc32.x86_64 121/191 Verifying : perl-POSIX-1.88-453.fc33.x86_64 122/191 Verifying : perl-PathTools-3.78-441.fc32.x86_64 123/191 Verifying : perl-Pod-Escapes-1:1.07-440.fc32.noarch 124/191 Verifying : perl-Pod-Perldoc-3.28.01-444.fc33.noarch 125/191 Verifying : perl-Pod-Simple-1:3.40-2.fc32.noarch 126/191 Verifying : perl-Pod-Usage-4:1.70-1.fc33.noarch 127/191 Verifying : perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 128/191 Verifying : perl-SelectSaver-1.02-453.fc33.noarch 129/191 Verifying : perl-Socket-4:2.029-5.fc32.x86_64 130/191 Verifying : perl-Storable-1:3.15-443.fc32.x86_64 131/191 Verifying : perl-Symbol-1.08-453.fc33.noarch 132/191 Verifying : perl-Term-ANSIColor-5.01-2.fc32.noarch 133/191 Verifying : perl-Term-Cap-1.17-440.fc32.noarch 134/191 Verifying : perl-Text-ParseWords-3.30-440.fc32.noarch 135/191 Verifying : perl-Text-Tabs+Wrap-2013.0523-440.fc32.noarch 136/191 Verifying : perl-Thread-Queue-3.13-440.fc32.noarch 137/191 Verifying : perl-Time-Local-2:1.300-2.fc32.noarch 138/191 Verifying : perl-constant-1.33-441.fc32.noarch 139/191 Verifying : perl-if-0.60.800-453.fc33.noarch 140/191 Verifying : perl-interpreter-4:5.30.2-453.fc33.x86_64 141/191 Verifying : perl-libs-4:5.30.2-453.fc33.x86_64 142/191 Verifying : perl-macros-4:5.30.2-453.fc33.noarch 143/191 Verifying : perl-mro-1.22-453.fc33.x86_64 144/191 Verifying : perl-overload-1.30-453.fc33.noarch 145/191 Verifying : perl-overloading-0.02-453.fc33.noarch 146/191 Verifying : perl-parent-1:0.238-1.fc32.noarch 147/191 Verifying : perl-podlators-1:4.14-2.fc32.noarch 148/191 Verifying : perl-subs-1.03-453.fc33.noarch 149/191 Verifying : perl-threads-1:2.22-442.fc32.x86_64 150/191 Verifying : perl-threads-shared-1.60-441.fc32.x86_64 151/191 Verifying : perl-vars-1.05-453.fc33.noarch 152/191 Verifying : pmix-3.1.5-1.fc33.x86_64 153/191 Verifying : procps-ng-3.3.15-7.fc32.x86_64 154/191 Verifying : python-pip-wheel-20.1.1-1.fc33.noarch 155/191 Verifying : python-rpm-macros-3.8-8.fc33.noarch 156/191 Verifying : python-setuptools-wheel-46.4.0-1.fc33.noarch 157/191 Verifying : python3-3.8.3-1.fc33.x86_64 158/191 Verifying : python3-atomicwrites-1.4.0-2.fc33.noarch 159/191 Verifying : python3-attrs-19.3.0-2.fc32.noarch 160/191 Verifying : python3-devel-3.8.3-1.fc33.x86_64 161/191 Verifying : python3-h5py-2.10.0-1.fc33.x86_64 162/191 Verifying : python3-libs-3.8.3-1.fc33.x86_64 163/191 Verifying : python3-more-itertools-7.2.0-4.fc32.noarch 164/191 Verifying : python3-mpi4py-mpich-3.0.3-2.fc33.x86_64 165/191 Verifying : python3-mpi4py-openmpi-3.0.3-2.fc33.x86_64 166/191 Verifying : python3-mpich-3.3.2-4.fc33.x86_64 167/191 Verifying : python3-neuron-7.7.2-4.fc33.x86_64 168/191 Verifying : python3-numpy-1:1.18.4-2.fc33.x86_64 169/191 Verifying : python3-numpy-f2py-1:1.18.4-2.fc33.x86_64 170/191 Verifying : python3-openmpi-4.0.4-0.2.rc1.fc33.x86_64 171/191 Verifying : python3-packaging-20.3-1.fc33.noarch 172/191 Verifying : python3-pluggy-0.13.0-2.fc32.noarch 173/191 Verifying : python3-py-1.8.0-8.fc32.noarch 174/191 Verifying : python3-pyparsing-2.4.7-1.fc33.noarch 175/191 Verifying : python3-pytest-4.6.10-1.fc33.noarch 176/191 Verifying : python3-rpm-generators-11-6.fc33.noarch 177/191 Verifying : python3-rpm-macros-3.8-8.fc33.noarch 178/191 Verifying : python3-setuptools-46.4.0-1.fc33.noarch 179/191 Verifying : python3-six-1.14.0-2.fc32.noarch 180/191 Verifying : python3-wcwidth-0.1.9-1.fc33.noarch 181/191 Verifying : qrencode-libs-4.0.2-5.fc32.x86_64 182/191 Verifying : readline-devel-8.0-4.fc32.x86_64 183/191 Verifying : rpm-mpi-hooks-6-5.fc32.noarch 184/191 Verifying : systemd-245.5-2.fc33.x86_64 185/191 Verifying : systemd-pam-245.5-2.fc33.x86_64 186/191 Verifying : systemd-rpm-macros-245.5-2.fc33.noarch 187/191 Verifying : systemd-udev-245.5-2.fc33.x86_64 188/191 Verifying : tcl-1:8.6.10-2.fc33.x86_64 189/191 Verifying : tcsh-6.22.02-3.fc32.x86_64 190/191 Verifying : ucx-1.6.1-2.fc32.x86_64 191/191 Installed: Lmod-8.3.13-1.fc33.x86_64 acl-2.2.53-5.fc32.x86_64 annobin-9.21-1.fc33.x86_64 autoconf-2.69-33.fc33.noarch automake-1.16.2-1.fc33.noarch cpp-10.1.1-1.fc33.x86_64 cryptsetup-libs-2.3.2-1.fc33.x86_64 dbus-1:1.12.16-5.fc33.x86_64 dbus-broker-23-2.fc33.x86_64 dbus-common-1:1.12.16-5.fc33.noarch device-mapper-1.02.171-1.fc33.x86_64 device-mapper-libs-1.02.171-1.fc33.x86_64 dracut-050-26.git20200316.fc33.x86_64 emacs-filesystem-1:26.3-3.fc33.noarch gcc-10.1.1-1.fc33.x86_64 gcc-gfortran-10.1.1-1.fc33.x86_64 gdbm-libs-1:1.18.1-3.fc32.x86_64 glibc-devel-2.31.9000-13.fc33.x86_64 glibc-headers-x86-2.31.9000-13.fc33.noarch gnutls-3.6.13-4.fc33.x86_64 groff-base-1.22.4-1.fc33.x86_64 hdf5-1.10.5-6.fc32.x86_64 hwdata-0.335-1.fc33.noarch hwloc-libs-2.0.4-3.fc32.x86_64 infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_64 iptables-libs-1.8.4-7.fc33.x86_64 isl-0.16.1-10.fc32.x86_64 iv-0-0.2.20191117git08c48bb.fc32.x86_64 json-c-0.14-5.fc33.x86_64 kbd-2.2.0-3.fc33.x86_64 kbd-legacy-2.2.0-3.fc33.noarch kbd-misc-2.2.0-3.fc33.noarch kernel-headers-5.7.0-0.rc7.git0.1.fc33.x86_64 kmod-27-2.fc33.x86_64 kmod-libs-27-2.fc33.x86_64 libICE-1.0.10-3.fc32.x86_64 libSM-1.2.3-5.fc32.x86_64 libX11-1.6.9-3.fc32.x86_64 libX11-common-1.6.9-3.fc32.noarch libXau-1.0.9-3.fc32.x86_64 libXext-1.3.4-3.fc32.x86_64 libXt-1.2.0-1.fc32.x86_64 libaec-1.0.4-3.fc32.x86_64 libargon2-20171227-4.fc32.x86_64 libcbor-0.5.0-7.fc33.x86_64 libedit-3.1-32.20191231cvs.fc32.x86_64 libevent-2.1.8-8.fc32.x86_64 libfabric-1.10.1-1.fc33.x86_64 libfido2-1.4.0-1.fc33.x86_64 libgfortran-10.1.1-1.fc33.x86_64 libibumad-29.0-1.fc33.x86_64 libibverbs-29.0-1.fc33.x86_64 libkcapi-1.2.0-1.fc33.x86_64 libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 liblzf-3.6-19.fc32.x86_64 libmnl-1.0.4-11.fc32.x86_64 libmpc-1.1.0-8.fc32.x86_64 libnetfilter_conntrack-1.0.7-4.fc32.x86_64 libnfnetlink-1.0.1-17.fc32.x86_64 libnl3-3.5.0-2.fc32.x86_64 libpcap-14:1.9.1-3.fc33.x86_64 libpsm2-11.2.86-4.fc32.x86_64 libquadmath-10.1.1-1.fc33.x86_64 libquadmath-devel-10.1.1-1.fc33.x86_64 librdmacm-29.0-1.fc33.x86_64 libseccomp-2.4.2-3.fc32.x86_64 libtool-2.4.6-34.fc33.x86_64 libxcb-1.13.1-4.fc32.x86_64 libxcrypt-devel-4.4.16-3.fc33.x86_64 lua-5.3.5-7.fc32.x86_64 lua-filesystem-1.6.3-12.fc32.x86_64 lua-json-1.3.2-14.fc32.noarch lua-lpeg-1.0.2-2.fc32.x86_64 lua-posix-33.3.1-16.fc32.x86_64 lua-term-0.07-10.fc32.x86_64 m4-1.4.18-12.fc32.x86_64 mpi4py-common-3.0.3-2.fc33.noarch mpich-3.3.2-4.fc33.x86_64 mpich-devel-3.3.2-4.fc33.x86_64 munge-libs-0.5.13-7.fc32.x86_64 ncurses-c++-libs-6.2-1.20200222.fc33.x86_64 ncurses-devel-6.2-1.20200222.fc33.x86_64 nettle-3.6-1.fc33.x86_64 neuron-7.7.2-4.fc33.x86_64 neuron-devel-7.7.2-4.fc33.x86_64 numactl-libs-2.0.12-4.fc32.x86_64 openblas-0.3.9-2.fc33.x86_64 openblas-threads-0.3.9-2.fc33.x86_64 openmpi-4.0.4-0.2.rc1.fc33.x86_64 openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 opensm-libs-3.3.23-1.fc33.x86_64 openssh-8.2p1-3.fc33.x86_64 openssh-clients-8.2p1-3.fc33.x86_64 orangefs-2.9.7-8.fc33.x86_64 pciutils-3.6.4-1.fc33.x86_64 pciutils-libs-3.6.4-1.fc33.x86_64 perl-B-1.76-453.fc33.x86_64 perl-Carp-1.50-440.fc32.noarch perl-Class-Struct-0.65-453.fc33.noarch perl-Data-Dumper-2.174-443.fc32.x86_64 perl-DynaLoader-1.45-453.fc33.x86_64 perl-Encode-4:3.06-445.fc33.x86_64 perl-Errno-1.30-453.fc33.x86_64 perl-Exporter-5.74-2.fc32.noarch perl-Fcntl-1.13-453.fc33.x86_64 perl-File-Basename-2.85-453.fc33.noarch perl-File-Compare-1.100.600-453.fc33.noarch perl-File-Copy-2.34-453.fc33.noarch perl-File-Find-1.36-453.fc33.noarch perl-File-Path-2.16-440.fc32.noarch perl-File-Temp-1:0.230.900-440.fc32.noarch perl-File-stat-1.08-453.fc33.noarch perl-Getopt-Long-1:2.51-2.fc32.noarch perl-Getopt-Std-1.12-453.fc33.noarch perl-HTTP-Tiny-0.076-440.fc32.noarch perl-IO-1.40-453.fc33.x86_64 perl-IPC-Open3-1.20-453.fc33.noarch perl-MIME-Base64-3.15-440.fc32.x86_64 perl-POSIX-1.88-453.fc33.x86_64 perl-PathTools-3.78-441.fc32.x86_64 perl-Pod-Escapes-1:1.07-440.fc32.noarch perl-Pod-Perldoc-3.28.01-444.fc33.noarch perl-Pod-Simple-1:3.40-2.fc32.noarch perl-Pod-Usage-4:1.70-1.fc33.noarch perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 perl-SelectSaver-1.02-453.fc33.noarch perl-Socket-4:2.029-5.fc32.x86_64 perl-Storable-1:3.15-443.fc32.x86_64 perl-Symbol-1.08-453.fc33.noarch perl-Term-ANSIColor-5.01-2.fc32.noarch perl-Term-Cap-1.17-440.fc32.noarch perl-Text-ParseWords-3.30-440.fc32.noarch perl-Text-Tabs+Wrap-2013.0523-440.fc32.noarch perl-Thread-Queue-3.13-440.fc32.noarch perl-Time-Local-2:1.300-2.fc32.noarch perl-constant-1.33-441.fc32.noarch perl-if-0.60.800-453.fc33.noarch perl-interpreter-4:5.30.2-453.fc33.x86_64 perl-libs-4:5.30.2-453.fc33.x86_64 perl-macros-4:5.30.2-453.fc33.noarch perl-mro-1.22-453.fc33.x86_64 perl-overload-1.30-453.fc33.noarch perl-overloading-0.02-453.fc33.noarch perl-parent-1:0.238-1.fc32.noarch perl-podlators-1:4.14-2.fc32.noarch perl-subs-1.03-453.fc33.noarch perl-threads-1:2.22-442.fc32.x86_64 perl-threads-shared-1.60-441.fc32.x86_64 perl-vars-1.05-453.fc33.noarch pmix-3.1.5-1.fc33.x86_64 procps-ng-3.3.15-7.fc32.x86_64 python-pip-wheel-20.1.1-1.fc33.noarch python-rpm-macros-3.8-8.fc33.noarch python-setuptools-wheel-46.4.0-1.fc33.noarch python3-3.8.3-1.fc33.x86_64 python3-Cython-3.0~a3-2.fc33.x86_64 python3-atomicwrites-1.4.0-2.fc33.noarch python3-attrs-19.3.0-2.fc32.noarch python3-devel-3.8.3-1.fc33.x86_64 python3-h5py-2.10.0-1.fc33.x86_64 python3-libs-3.8.3-1.fc33.x86_64 python3-more-itertools-7.2.0-4.fc32.noarch python3-mpi4py-mpich-3.0.3-2.fc33.x86_64 python3-mpi4py-openmpi-3.0.3-2.fc33.x86_64 python3-mpich-3.3.2-4.fc33.x86_64 python3-neuron-7.7.2-4.fc33.x86_64 python3-numpy-1:1.18.4-2.fc33.x86_64 python3-numpy-f2py-1:1.18.4-2.fc33.x86_64 python3-openmpi-4.0.4-0.2.rc1.fc33.x86_64 python3-packaging-20.3-1.fc33.noarch python3-pluggy-0.13.0-2.fc32.noarch python3-py-1.8.0-8.fc32.noarch python3-pyparsing-2.4.7-1.fc33.noarch python3-pytest-4.6.10-1.fc33.noarch python3-rpm-generators-11-6.fc33.noarch python3-rpm-macros-3.8-8.fc33.noarch python3-scipy-1.4.1-2.fc33.x86_64 python3-setuptools-46.4.0-1.fc33.noarch python3-six-1.14.0-2.fc32.noarch python3-wcwidth-0.1.9-1.fc33.noarch qrencode-libs-4.0.2-5.fc32.x86_64 rdma-core-29.0-1.fc33.x86_64 readline-devel-8.0-4.fc32.x86_64 rpm-mpi-hooks-6-5.fc32.noarch systemd-245.5-2.fc33.x86_64 systemd-pam-245.5-2.fc33.x86_64 systemd-rpm-macros-245.5-2.fc33.noarch systemd-udev-245.5-2.fc33.x86_64 tcl-1:8.6.10-2.fc33.x86_64 tcsh-6.22.02-3.fc32.x86_64 ucx-1.6.1-2.fc32.x86_64 Complete! Finish: build setup for python-lfpy-2.0.7-6.fc33.src.rpm Start: rpmbuild python-lfpy-2.0.7-6.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.WSpKsv + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf LFPy-2.0.7 + /usr/bin/gzip -dc /builddir/build/SOURCES/LFPy-2.0.7.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd LFPy-2.0.7 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf LFPy.egg-info + sed -i '/mpi4py/ d' setup.py ++ find . -type f -name '*.py' + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./setup.py + touch -r ./setup.py ./setup.py.new + mv ./setup.py.new ./setup.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/nsg_example/nsg_example.py + touch -r ./examples/nsg_example/nsg_example.py ./examples/nsg_example/nsg_example.py.new + mv ./examples/nsg_example/nsg_example.py.new ./examples/nsg_example/nsg_example.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/mazzoni_example/single_cell.py + touch -r ./examples/mazzoni_example/single_cell.py ./examples/mazzoni_example/single_cell.py.new + mv ./examples/mazzoni_example/single_cell.py.new ./examples/mazzoni_example/single_cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/mazzoni_example/ref_sim.py + touch -r ./examples/mazzoni_example/ref_sim.py ./examples/mazzoni_example/ref_sim.py.new + mv ./examples/mazzoni_example/ref_sim.py.new ./examples/mazzoni_example/ref_sim.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_suppl.py + touch -r ./examples/example_suppl.py ./examples/example_suppl.py.new + mv ./examples/example_suppl.py.new ./examples/example_suppl.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_population.py + touch -r ./examples/example_network/example_network_population.py ./examples/example_network/example_network_population.py.new + mv ./examples/example_network/example_network_population.py.new ./examples/example_network/example_network_population.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_cell.py + touch -r ./examples/example_network/example_network_cell.py ./examples/example_network/example_network_cell.py.new + mv ./examples/example_network/example_network_cell.py.new ./examples/example_network/example_network_cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network.py + touch -r ./examples/example_network/example_network.py ./examples/example_network/example_network.py.new + mv ./examples/example_network/example_network.py.new ./examples/example_network/example_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_mpi_2.py + touch -r ./examples/example_mpi_2.py ./examples/example_mpi_2.py.new + mv ./examples/example_mpi_2.py.new ./examples/example_mpi_2.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_mpi.py + touch -r ./examples/example_mpi.py ./examples/example_mpi.py.new + mv ./examples/example_mpi.py.new ./examples/example_mpi.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_loadL5bPCmodelsEH.py + touch -r ./examples/example_loadL5bPCmodelsEH.py ./examples/example_loadL5bPCmodelsEH.py.new + mv ./examples/example_loadL5bPCmodelsEH.py.new ./examples/example_loadL5bPCmodelsEH.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_anisotropy.py + touch -r ./examples/example_anisotropy.py ./examples/example_anisotropy.py.new + mv ./examples/example_anisotropy.py.new ./examples/example_anisotropy.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_MEA.py + touch -r ./examples/example_MEA.py ./examples/example_MEA.py.new + mv ./examples/example_MEA.py.new ./examples/example_MEA.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_LFPyCellTemplate.py + touch -r ./examples/example_LFPyCellTemplate.py ./examples/example_LFPyCellTemplate.py.new + mv ./examples/example_LFPyCellTemplate.py.new ./examples/example_LFPyCellTemplate.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_EPFL_neurons.py + touch -r ./examples/example_EPFL_neurons.py ./examples/example_EPFL_neurons.py.new + mv ./examples/example_EPFL_neurons.py.new ./examples/example_EPFL_neurons.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_EEG.py + touch -r ./examples/example_EEG.py ./examples/example_EEG.py.new + mv ./examples/example_EEG.py.new ./examples/example_EEG.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_ECoG_4sphere.py + touch -r ./examples/example_ECoG_4sphere.py ./examples/example_ECoG_4sphere.py.new + mv ./examples/example_ECoG_4sphere.py.new ./examples/example_ECoG_4sphere.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_ECoG.py + touch -r ./examples/example_ECoG.py ./examples/example_ECoG.py.new + mv ./examples/example_ECoG.py.new ./examples/example_ECoG.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/create_rotation_file.py + touch -r ./examples/create_rotation_file.py ./examples/create_rotation_file.py.new + mv ./examples/create_rotation_file.py.new ./examples/create_rotation_file.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/figure_7_8.py + touch -r ./examples/bioRxiv281717/figure_7_8/figure_7_8.py ./examples/bioRxiv281717/figure_7_8/figure_7_8.py.new + mv ./examples/bioRxiv281717/figure_7_8/figure_7_8.py.new ./examples/bioRxiv281717/figure_7_8/figure_7_8.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_6.py + touch -r ./examples/bioRxiv281717/figure_6.py ./examples/bioRxiv281717/figure_6.py.new + mv ./examples/bioRxiv281717/figure_6.py.new ./examples/bioRxiv281717/figure_6.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_5.py + touch -r ./examples/bioRxiv281717/figure_5.py ./examples/bioRxiv281717/figure_5.py.new + mv ./examples/bioRxiv281717/figure_5.py.new ./examples/bioRxiv281717/figure_5.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_4.py + touch -r ./examples/bioRxiv281717/figure_4.py ./examples/bioRxiv281717/figure_4.py.new + mv ./examples/bioRxiv281717/figure_4.py.new ./examples/bioRxiv281717/figure_4.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_2.py + touch -r ./examples/bioRxiv281717/figure_2.py ./examples/bioRxiv281717/figure_2.py.new + mv ./examples/bioRxiv281717/figure_2.py.new ./examples/bioRxiv281717/figure_2.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_plotting.py + touch -r ./examples/bioRxiv281717/example_parallel_network_plotting.py ./examples/bioRxiv281717/example_parallel_network_plotting.py.new + mv ./examples/bioRxiv281717/example_parallel_network_plotting.py.new ./examples/bioRxiv281717/example_parallel_network_plotting.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_parameters.py + touch -r ./examples/bioRxiv281717/example_parallel_network_parameters.py ./examples/bioRxiv281717/example_parallel_network_parameters.py.new + mv ./examples/bioRxiv281717/example_parallel_network_parameters.py.new ./examples/bioRxiv281717/example_parallel_network_parameters.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_methods.py + touch -r ./examples/bioRxiv281717/example_parallel_network_methods.py ./examples/bioRxiv281717/example_parallel_network_methods.py.new + mv ./examples/bioRxiv281717/example_parallel_network_methods.py.new ./examples/bioRxiv281717/example_parallel_network_methods.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network.py + touch -r ./examples/bioRxiv281717/example_parallel_network.py ./examples/bioRxiv281717/example_parallel_network.py.new + mv ./examples/bioRxiv281717/example_parallel_network.py.new ./examples/bioRxiv281717/example_parallel_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./doc/stubs/neuron/__init__.py + touch -r ./doc/stubs/neuron/__init__.py ./doc/stubs/neuron/__init__.py.new + mv ./doc/stubs/neuron/__init__.py.new ./doc/stubs/neuron/__init__.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./doc/stubs/mpi4py/__init__.py + touch -r ./doc/stubs/mpi4py/__init__.py ./doc/stubs/mpi4py/__init__.py.new + mv ./doc/stubs/mpi4py/__init__.py.new ./doc/stubs/mpi4py/__init__.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./doc/conf.py + touch -r ./doc/conf.py ./doc/conf.py.new + mv ./doc/conf.py.new ./doc/conf.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/tools.py + touch -r ./LFPy/tools.py ./LFPy/tools.py.new + mv ./LFPy/tools.py.new ./LFPy/tools.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_tools.py + touch -r ./LFPy/test/test_tools.py ./LFPy/test/test_tools.py.new + mv ./LFPy/test/test_tools.py.new ./LFPy/test/test_tools.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_templatecell.py + touch -r ./LFPy/test/test_templatecell.py ./LFPy/test/test_templatecell.py.new + mv ./LFPy/test/test_templatecell.py.new ./LFPy/test/test_templatecell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_recextelectrode.py + touch -r ./LFPy/test/test_recextelectrode.py ./LFPy/test/test_recextelectrode.py.new + mv ./LFPy/test/test_recextelectrode.py.new ./LFPy/test/test_recextelectrode.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_pointprocess.py + touch -r ./LFPy/test/test_pointprocess.py ./LFPy/test/test_pointprocess.py.new + mv ./LFPy/test/test_pointprocess.py.new ./LFPy/test/test_pointprocess.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_networkcell.py + touch -r ./LFPy/test/test_networkcell.py ./LFPy/test/test_networkcell.py.new + mv ./LFPy/test/test_networkcell.py.new ./LFPy/test/test_networkcell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_network.py + touch -r ./LFPy/test/test_network.py ./LFPy/test/test_network.py.new + mv ./LFPy/test/test_network.py.new ./LFPy/test/test_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_misc.py + touch -r ./LFPy/test/test_misc.py ./LFPy/test/test_misc.py.new + mv ./LFPy/test/test_misc.py.new ./LFPy/test/test_misc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_lfpcalc.py + touch -r ./LFPy/test/test_lfpcalc.py ./LFPy/test/test_lfpcalc.py.new + mv ./LFPy/test/test_lfpcalc.py.new ./LFPy/test/test_lfpcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_inputgenerators.py + touch -r ./LFPy/test/test_inputgenerators.py ./LFPy/test/test_inputgenerators.py.new + mv ./LFPy/test/test_inputgenerators.py.new ./LFPy/test/test_inputgenerators.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_eegmegcalc.py + touch -r ./LFPy/test/test_eegmegcalc.py ./LFPy/test/test_eegmegcalc.py.new + mv ./LFPy/test/test_eegmegcalc.py.new ./LFPy/test/test_eegmegcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_cell.py + touch -r ./LFPy/test/test_cell.py ./LFPy/test/test_cell.py.new + mv ./LFPy/test/test_cell.py.new ./LFPy/test/test_cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_alias_method.py + touch -r ./LFPy/test/test_alias_method.py ./LFPy/test/test_alias_method.py.new + mv ./LFPy/test/test_alias_method.py.new ./LFPy/test/test_alias_method.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/common.py + touch -r ./LFPy/test/common.py ./LFPy/test/common.py.new + mv ./LFPy/test/common.py.new ./LFPy/test/common.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/__init__.py + touch -r ./LFPy/test/__init__.py ./LFPy/test/__init__.py.new + mv ./LFPy/test/__init__.py.new ./LFPy/test/__init__.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/templatecell.py + touch -r ./LFPy/templatecell.py ./LFPy/templatecell.py.new + mv ./LFPy/templatecell.py.new ./LFPy/templatecell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/run_simulation.py + touch -r ./LFPy/run_simulation.py ./LFPy/run_simulation.py.new + mv ./LFPy/run_simulation.py.new ./LFPy/run_simulation.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/recextelectrode.py + touch -r ./LFPy/recextelectrode.py ./LFPy/recextelectrode.py.new + mv ./LFPy/recextelectrode.py.new ./LFPy/recextelectrode.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/pointprocess.py + touch -r ./LFPy/pointprocess.py ./LFPy/pointprocess.py.new + mv ./LFPy/pointprocess.py.new ./LFPy/pointprocess.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/network.py + touch -r ./LFPy/network.py ./LFPy/network.py.new + mv ./LFPy/network.py.new ./LFPy/network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/lfpcalc.py + touch -r ./LFPy/lfpcalc.py ./LFPy/lfpcalc.py.new + mv ./LFPy/lfpcalc.py.new ./LFPy/lfpcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/inputgenerators.py + touch -r ./LFPy/inputgenerators.py ./LFPy/inputgenerators.py.new + mv ./LFPy/inputgenerators.py.new ./LFPy/inputgenerators.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/eegmegcalc.py + touch -r ./LFPy/eegmegcalc.py ./LFPy/eegmegcalc.py.new + mv ./LFPy/eegmegcalc.py.new ./LFPy/eegmegcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/cell.py + touch -r ./LFPy/cell.py ./LFPy/cell.py.new + mv ./LFPy/cell.py.new ./LFPy/cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/alias_method.py + touch -r ./LFPy/alias_method.py ./LFPy/alias_method.py.new + mv ./LFPy/alias_method.py.new ./LFPy/alias_method.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/__init__.py + touch -r ./LFPy/__init__.py ./LFPy/__init__.py.new + mv ./LFPy/__init__.py.new ./LFPy/__init__.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.vDmpiw + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.0.7 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' Creating x86_64 directory for .o files. /builddir/build/BUILD/LFPy-2.0.7/LFPy/test expsyni.mod sinsyn.mod expsyni.mod sinsyn.mod "/usr/bin/nocmodl" expsyni "/usr/bin/nocmodl" sinsyn "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o mod_func.lo mod_func.c Translating expsyni.mod into expsyni.c Thread Safe "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o expsyni.lo expsyni.c Translating sinsyn.mod into sinsyn.c Thread Safe "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o sinsyn.lo sinsyn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mod_func.c -fPIC -DPIC -o .libs/mod_func.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mod_func.c -o mod_func.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c expsyni.c -fPIC -DPIC -o .libs/expsyni.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sinsyn.c -fPIC -DPIC -o .libs/sinsyn.o expsyni.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } expsyni.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | "exp_current", _hoc_exp_current, | { } 123 | "update_queue", _hoc_update_queue, | { } 124 | 0, 0 | { 125 | }; | } expsyni.c:132:44: warning: missing braces around initializer [-Wmissing-braces] 132 | static HocParmLimits _hoc_parm_limits[] = { | ^ 133 | "tau", 1e-09, 1e+09, | { { }} 134 | 0,0,0 | { { 135 | }; | }} expsyni.c:136:42: warning: missing braces around initializer [-Wmissing-braces] 136 | static HocParmUnits _hoc_parm_units[] = { | ^ 137 | "tau", "ms", | { } 138 | "i", "nA", | { } 139 | 0,0 | { 140 | }; | } expsyni.c:142:33: warning: missing braces around initializer [-Wmissing-braces] 142 | static DoubScal hoc_scdoub[] = { | ^ 143 | 0,0 | { 144 | }; | } expsyni.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } expsyni.c: In function ‘nrn_alloc’: expsyni.c:172:8: warning: unused variable ‘prop_ion’ [-Wunused-variable] 172 | Prop *prop_ion; | ^~~~~~~~ expsyni.c: In function ‘_expsyni_reg’: expsyni.c:201:6: warning: unused variable ‘_vectorized’ [-Wunused-variable] 201 | int _vectorized = 1; | ^~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:233:9: warning: unused variable ‘_lk’ [-Wunused-variable] 233 | double _lk ; | ^~~ expsyni.c: In function ‘_net_receive__ExpSynI’: expsyni.c:278:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ expsyni.c:278:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ expsyni.c: In function ‘initmodel’: expsyni.c:293:18: warning: unused variable ‘_save’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~~~~ expsyni.c:293:7: warning: unused variable ‘_i’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~ expsyni.c: In function ‘_nrn_current__ExpSynI’: expsyni.c:328:11: warning: unused variable ‘_lk’ [-Wunused-variable] 328 | double _lk , _lexpired_spikes , _lx ; | ^~~ expsyni.c: In function ‘_nrn_jacob__ExpSynI’: expsyni.c:386:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ expsyni.c:386:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ expsyni.c: In function ‘_initlists’: expsyni.c:417:6: warning: unused variable ‘_i’ [-Wunused-variable] 417 | int _i; static int _first = 1; | ^~ expsyni.c:416:21: warning: unused variable ‘_p’ [-Wunused-variable] 416 | double _x; double* _p = &_x; | ^~ At top level: expsyni.c:413:13: warning: ‘terminal’ defined but not used [-Wunused-function] 413 | static void terminal(){} | ^~~~~~~~ expsyni.c:229:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 229 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ expsyni.c:227:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 227 | static int _ninits = 0; | ^~~~~~~ expsyni.c:226:12: warning: ‘error’ defined but not used [-Wunused-variable] 226 | static int error; | ^~~~~ expsyni.c:224:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 224 | static char *modelname = "Exponential-function synaptic current, with NET_RECEIVE"; | ^~~~~~~~~ expsyni.c:223:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 223 | static int _reset; | ^~~~~~ expsyni.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ expsyni.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:240:8: warning: ‘_lupdate_queue’ is used uninitialized in this function [-Wuninitialized] 240 | return _lupdate_queue; | ^~~~~~~~~~~~~~ sinsyn.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } sinsyn.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | 0, 0 | { 123 | }; | } sinsyn.c:128:44: warning: missing braces around initializer [-Wmissing-braces] 128 | static HocParmLimits _hoc_parm_limits[] = { | ^ 129 | 0,0,0 | { { 130 | }; | }} sinsyn.c:131:42: warning: missing braces around initializer [-Wmissing-braces] 131 | static HocParmUnits _hoc_parm_units[] = { | ^ 132 | "del", "ms", | { } 133 | "dur", "ms", | { } 134 | "pkamp", "nA", | { } 135 | "freq", "Hz", | { } 136 | "bias", "nA", | { } 137 | "i", "nA", | { } 138 | 0,0 | { 139 | }; | } sinsyn.c:141:33: warning: missing braces around initializer [-Wmissing-braces] 141 | static DoubScal hoc_scdoub[] = { | ^ 142 | "PI_SinSyn", &PI_SinSyn, | { } 143 | 0,0 | { 144 | }; | } sinsyn.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:176:8: warning: unused variable ‘prop_ion’ [-Wunused-variable] 176 | Prop *prop_ion; | ^~~~~~~~ sinsyn.c: In function ‘_sinsyn_reg’: sinsyn.c:210:6: warning: unused variable ‘_vectorized’ [-Wunused-variable] 210 | int _vectorized = 1; | ^~~~~~~~~~~ sinsyn.c: In function ‘_net_receive__SinSyn’: sinsyn.c:241:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ sinsyn.c:241:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ sinsyn.c: In function ‘initmodel’: sinsyn.c:248:18: warning: unused variable ‘_save’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~~~~ sinsyn.c:248:7: warning: unused variable ‘_i’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~ sinsyn.c: In function ‘_nrn_jacob__SinSyn’: sinsyn.c:337:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ sinsyn.c:337:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ sinsyn.c: In function ‘_initlists’: sinsyn.c:368:6: warning: unused variable ‘_i’ [-Wunused-variable] 368 | int _i; static int _first = 1; | ^~ sinsyn.c:367:21: warning: unused variable ‘_p’ [-Wunused-variable] 367 | double _x; double* _p = &_x; | ^~ At top level: sinsyn.c:364:13: warning: ‘terminal’ defined but not used [-Wunused-function] 364 | static void terminal(){} | ^~~~~~~~ sinsyn.c:238:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 238 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ sinsyn.c:236:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 236 | static int _ninits = 0; | ^~~~~~~ sinsyn.c:235:12: warning: ‘error’ defined but not used [-Wunused-variable] 235 | static int error; | ^~~~~ sinsyn.c:233:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 233 | static char *modelname = ""; | ^~~~~~~~~ sinsyn.c:232:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 232 | static int _reset; | ^~~~~~ sinsyn.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ sinsyn.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ sinsyn.c:71:16: warning: ‘_extcall_thread’ defined but not used [-Wunused-variable] 71 | static Datum* _extcall_thread; | ^~~~~~~~~~~~~~~ expsyni.c: In function ‘nrn_alloc’: expsyni.c:188:17: warning: ‘_ppvar’ may be used uninitialized in this function [-Wmaybe-uninitialized] 188 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ In file included from expsyni.c:11: expsyni.c: In function ‘_nrn_cur__ExpSynI’: /usr/include/nrn/section.h:107:26: warning: ‘_nd’ may be used uninitialized in this function [-Wmaybe-uninitialized] 107 | #define NODERHS(n) (*((n)->_rhs)) | ^~ expsyni.c:349:7: note: ‘_nd’ was declared here 349 | Node *_nd; int* _ni; double _rhs, _v; int _iml, _cntml; | ^~~ sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:197:17: warning: ‘_ppvar’ may be used uninitialized in this function [-Wmaybe-uninitialized] 197 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c expsyni.c -o expsyni.o >/dev/null 2>&1 In file included from sinsyn.c:11: sinsyn.c: In function ‘_nrn_cur__SinSyn’: /usr/include/nrn/section.h:107:26: warning: ‘_nd’ may be used uninitialized in this function [-Wmaybe-uninitialized] 107 | #define NODERHS(n) (*((n)->_rhs)) | ^~ sinsyn.c:300:7: note: ‘_nd’ was declared here 300 | Node *_nd; int* _ni; double _rhs, _v; int _iml, _cntml; | ^~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sinsyn.c -o sinsyn.o >/dev/null 2>&1 "/usr/bin/libtool" --mode=link gcc -module -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnrnmech.la -rpath "/usr/lib64" expsyni.lo sinsyn.lo mod_func.lo -L"/usr/lib64" -lnrnoc -loc -lmemacs -lnrnmpi -lscopmath -lsparse13 -lreadline -lncurses -ltinfo -L"/usr/lib64" -lnrniv -livoc -lneuron_gnu -lmeschach -lsundials -lm -ldl libtool: link: gcc -shared -fPIC -DPIC .libs/expsyni.o .libs/sinsyn.o .libs/mod_func.o -L/usr/lib64 -lnrnoc -loc -lmemacs -lnrnmpi -lscopmath -lsparse13 -lreadline -lncurses -ltinfo -lnrniv -livoc -lneuron_gnu -lmeschach -lsundials -lm -ldl -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-soname -Wl,libnrnmech.so.0 -o .libs/libnrnmech.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libnrnmech.so.0" && ln -s "libnrnmech.so.0.0.0" "libnrnmech.so.0") libtool: link: (cd ".libs" && rm -f "libnrnmech.so" && ln -s "libnrnmech.so.0.0.0" "libnrnmech.so") libtool: link: ar cru .libs/libnrnmech.a expsyni.o sinsyn.o mod_func.o libtool: link: ranlib .libs/libnrnmech.a libtool: link: ( cd ".libs" && rm -f "libnrnmech.la" && ln -s "../libnrnmech.la" "libnrnmech.la" ) Successfully created x86_64/special running build running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/LFPy copying LFPy/__init__.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/alias_method.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/cell.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/eegmegcalc.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/inputgenerators.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/lfpcalc.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/network.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/pointprocess.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/recextelectrode.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/run_simulation.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/templatecell.py -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/tools.py -> build/lib.linux-x86_64-3.8/LFPy running egg_info creating LFPy.egg-info writing LFPy.egg-info/PKG-INFO writing dependency_links to LFPy.egg-info/dependency_links.txt writing requirements to LFPy.egg-info/requires.txt writing top-level names to LFPy.egg-info/top_level.txt writing manifest file 'LFPy.egg-info/SOURCES.txt' cythoning LFPy/run_simulation.pyx to LFPy/run_simulation.c cythoning LFPy/alias_method.pyx to LFPy/alias_method.c reading manifest file 'LFPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'x86_64' under directory 'LFPy/test' warning: no files found matching 'morphologies' under directory 'examples' warning: no files found matching '*' under directory 'documentation' warning: no files found matching '*' under directory 'html' writing manifest file 'LFPy.egg-info/SOURCES.txt' copying LFPy/alias_method.c -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/alias_method.pyx -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/run_simulation.c -> build/lib.linux-x86_64-3.8/LFPy copying LFPy/run_simulation.pyx -> build/lib.linux-x86_64-3.8/LFPy creating build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/__init__.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/ball_and_stick_template.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/ball_and_sticks.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/ball_and_sticks_w_lists.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/common.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/expsyni.mod -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/fem_mix_dip.npz -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/sinsyn.mod -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/stick.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/stick_template.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/sticks_not_connected_head_to_toe.hoc -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_alias_method.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_cell.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_eegmegcalc.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_inputgenerators.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_lfpcalc.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_misc.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_network.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_networkcell.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_pointprocess.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_recextelectrode.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_templatecell.py -> build/lib.linux-x86_64-3.8/LFPy/test copying LFPy/test/test_tools.py -> build/lib.linux-x86_64-3.8/LFPy/test creating build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.c -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.lo -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.mod -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/libnrnmech.la -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/mod_func.c -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/mod_func.lo -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/mod_func.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.c -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.lo -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.mod -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 copying LFPy/test/x86_64/special -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64 creating build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/expsyni.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.a -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.la -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.lai -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.so -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.so.0 -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.so.0.0.0 -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/mod_func.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/sinsyn.o -> build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs running build_ext building 'LFPy.run_simulation' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/LFPy gcc -pthread -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c LFPy/run_simulation.c -o build/temp.linux-x86_64-3.8/LFPy/run_simulation.o In file included from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4, from LFPy/run_simulation.c:768: /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.8/LFPy/run_simulation.o -L/usr/lib64 -o build/lib.linux-x86_64-3.8/LFPy/run_simulation.cpython-38-x86_64-linux-gnu.so building 'LFPy.alias_method' extension gcc -pthread -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c LFPy/alias_method.c -o build/temp.linux-x86_64-3.8/LFPy/alias_method.o In file included from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4, from LFPy/alias_method.c:768: /usr/lib64/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.8/LFPy/alias_method.o -L/usr/lib64 -o build/lib.linux-x86_64-3.8/LFPy/alias_method.cpython-38-x86_64-linux-gnu.so + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.U2ojHw + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 ++ dirname /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 + cd LFPy-2.0.7 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 Creating x86_64 directory for .o files. /builddir/build/BUILD/LFPy-2.0.7/LFPy/test expsyni.mod sinsyn.mod expsyni.mod sinsyn.mod "/usr/bin/nocmodl" expsyni "/usr/bin/nocmodl" sinsyn "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o mod_func.lo mod_func.c Translating expsyni.mod into expsyni.c Translating sinsyn.mod into sinsyn.c Thread Safe "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o sinsyn.lo sinsyn.c Thread Safe "/usr/bin/libtool" --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I"/usr/include/nrn" -I"/usr/lib64" -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o expsyni.lo expsyni.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sinsyn.c -fPIC -DPIC -o .libs/sinsyn.o sinsyn.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } sinsyn.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | 0, 0 | { 123 | }; | } libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mod_func.c -fPIC -DPIC -o .libs/mod_func.o sinsyn.c:128:44: warning: missing braces around initializer [-Wmissing-braces] 128 | static HocParmLimits _hoc_parm_limits[] = { | ^ 129 | 0,0,0 | { { 130 | }; | }} sinsyn.c:131:42: warning: missing braces around initializer [-Wmissing-braces] 131 | static HocParmUnits _hoc_parm_units[] = { | ^ 132 | "del", "ms", | { } 133 | "dur", "ms", | { } 134 | "pkamp", "nA", | { } 135 | "freq", "Hz", | { } 136 | "bias", "nA", | { } 137 | "i", "nA", | { } 138 | 0,0 | { 139 | }; | } sinsyn.c:141:33: warning: missing braces around initializer [-Wmissing-braces] 141 | static DoubScal hoc_scdoub[] = { | ^ 142 | "PI_SinSyn", &PI_SinSyn, | { } 143 | 0,0 | { 144 | }; | } sinsyn.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:176:8: warning: unused variable ‘prop_ion’ [-Wunused-variable] 176 | Prop *prop_ion; | ^~~~~~~~ sinsyn.c: In function ‘_sinsyn_reg’: sinsyn.c:210:6: warning: unused variable ‘_vectorized’ [-Wunused-variable] 210 | int _vectorized = 1; | ^~~~~~~~~~~ sinsyn.c: In function ‘_net_receive__SinSyn’: sinsyn.c:241:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ sinsyn.c:241:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ sinsyn.c: In function ‘initmodel’: sinsyn.c:248:18: warning: unused variable ‘_save’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~~~~ sinsyn.c:248:7: warning: unused variable ‘_i’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~ sinsyn.c: In function ‘_nrn_jacob__SinSyn’: sinsyn.c:337:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ sinsyn.c:337:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ sinsyn.c: In function ‘_initlists’: sinsyn.c:368:6: warning: unused variable ‘_i’ [-Wunused-variable] 368 | int _i; static int _first = 1; | ^~ sinsyn.c:367:21: warning: unused variable ‘_p’ [-Wunused-variable] 367 | double _x; double* _p = &_x; | ^~ At top level: sinsyn.c:364:13: warning: ‘terminal’ defined but not used [-Wunused-function] 364 | static void terminal(){} | ^~~~~~~~ sinsyn.c:238:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 238 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ sinsyn.c:236:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 236 | static int _ninits = 0; | ^~~~~~~ sinsyn.c:235:12: warning: ‘error’ defined but not used [-Wunused-variable] 235 | static int error; | ^~~~~ sinsyn.c:233:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 233 | static char *modelname = ""; | ^~~~~~~~~ sinsyn.c:232:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 232 | static int _reset; | ^~~~~~ sinsyn.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ sinsyn.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ sinsyn.c:71:16: warning: ‘_extcall_thread’ defined but not used [-Wunused-variable] 71 | static Datum* _extcall_thread; | ^~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c expsyni.c -fPIC -DPIC -o .libs/expsyni.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mod_func.c -o mod_func.o >/dev/null 2>&1 sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:197:17: warning: ‘_ppvar’ may be used uninitialized in this function [-Wmaybe-uninitialized] 197 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ In file included from sinsyn.c:11: sinsyn.c: In function ‘_nrn_cur__SinSyn’: /usr/include/nrn/section.h:107:26: warning: ‘_nd’ may be used uninitialized in this function [-Wmaybe-uninitialized] 107 | #define NODERHS(n) (*((n)->_rhs)) | ^~ sinsyn.c:300:7: note: ‘_nd’ was declared here 300 | Node *_nd; int* _ni; double _rhs, _v; int _iml, _cntml; | ^~~ expsyni.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } expsyni.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | "exp_current", _hoc_exp_current, | { } 123 | "update_queue", _hoc_update_queue, | { } 124 | 0, 0 | { 125 | }; | } expsyni.c:132:44: warning: missing braces around initializer [-Wmissing-braces] 132 | static HocParmLimits _hoc_parm_limits[] = { | ^ 133 | "tau", 1e-09, 1e+09, | { { }} 134 | 0,0,0 | { { 135 | }; | }} expsyni.c:136:42: warning: missing braces around initializer [-Wmissing-braces] 136 | static HocParmUnits _hoc_parm_units[] = { | ^ 137 | "tau", "ms", | { } 138 | "i", "nA", | { } 139 | 0,0 | { 140 | }; | } expsyni.c:142:33: warning: missing braces around initializer [-Wmissing-braces] 142 | static DoubScal hoc_scdoub[] = { | ^ 143 | 0,0 | { 144 | }; | } expsyni.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } expsyni.c: In function ‘nrn_alloc’: expsyni.c:172:8: warning: unused variable ‘prop_ion’ [-Wunused-variable] 172 | Prop *prop_ion; | ^~~~~~~~ expsyni.c: In function ‘_expsyni_reg’: expsyni.c:201:6: warning: unused variable ‘_vectorized’ [-Wunused-variable] 201 | int _vectorized = 1; | ^~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:233:9: warning: unused variable ‘_lk’ [-Wunused-variable] 233 | double _lk ; | ^~~ expsyni.c: In function ‘_net_receive__ExpSynI’: expsyni.c:278:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ expsyni.c:278:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ expsyni.c: In function ‘initmodel’: expsyni.c:293:18: warning: unused variable ‘_save’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~~~~ expsyni.c:293:7: warning: unused variable ‘_i’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~ expsyni.c: In function ‘_nrn_current__ExpSynI’: expsyni.c:328:11: warning: unused variable ‘_lk’ [-Wunused-variable] 328 | double _lk , _lexpired_spikes , _lx ; | ^~~ expsyni.c: In function ‘_nrn_jacob__ExpSynI’: expsyni.c:386:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ expsyni.c:386:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ expsyni.c: In function ‘_initlists’: expsyni.c:417:6: warning: unused variable ‘_i’ [-Wunused-variable] 417 | int _i; static int _first = 1; | ^~ expsyni.c:416:21: warning: unused variable ‘_p’ [-Wunused-variable] 416 | double _x; double* _p = &_x; | ^~ At top level: expsyni.c:413:13: warning: ‘terminal’ defined but not used [-Wunused-function] 413 | static void terminal(){} | ^~~~~~~~ expsyni.c:229:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 229 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ expsyni.c:227:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 227 | static int _ninits = 0; | ^~~~~~~ expsyni.c:226:12: warning: ‘error’ defined but not used [-Wunused-variable] 226 | static int error; | ^~~~~ expsyni.c:224:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 224 | static char *modelname = "Exponential-function synaptic current, with NET_RECEIVE"; | ^~~~~~~~~ expsyni.c:223:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 223 | static int _reset; | ^~~~~~ expsyni.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ expsyni.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:240:8: warning: ‘_lupdate_queue’ is used uninitialized in this function [-Wuninitialized] 240 | return _lupdate_queue; | ^~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sinsyn.c -o sinsyn.o >/dev/null 2>&1 expsyni.c: In function ‘nrn_alloc’: expsyni.c:188:17: warning: ‘_ppvar’ may be used uninitialized in this function [-Wmaybe-uninitialized] 188 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ In file included from expsyni.c:11: expsyni.c: In function ‘_nrn_cur__ExpSynI’: /usr/include/nrn/section.h:107:26: warning: ‘_nd’ may be used uninitialized in this function [-Wmaybe-uninitialized] 107 | #define NODERHS(n) (*((n)->_rhs)) | ^~ expsyni.c:349:7: note: ‘_nd’ was declared here 349 | Node *_nd; int* _ni; double _rhs, _v; int _iml, _cntml; | ^~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include/nrn -I/usr/lib64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c expsyni.c -o expsyni.o >/dev/null 2>&1 "/usr/bin/libtool" --mode=link gcc -module -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libnrnmech.la -rpath "/usr/lib64" expsyni.lo sinsyn.lo mod_func.lo -L"/usr/lib64" -lnrnoc -loc -lmemacs -lnrnmpi -lscopmath -lsparse13 -lreadline -lncurses -ltinfo -L"/usr/lib64" -lnrniv -livoc -lneuron_gnu -lmeschach -lsundials -lm -ldl libtool: link: gcc -shared -fPIC -DPIC .libs/expsyni.o .libs/sinsyn.o .libs/mod_func.o -L/usr/lib64 -lnrnoc -loc -lmemacs -lnrnmpi -lscopmath -lsparse13 -lreadline -lncurses -ltinfo -lnrniv -livoc -lneuron_gnu -lmeschach -lsundials -lm -ldl -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-soname -Wl,libnrnmech.so.0 -o .libs/libnrnmech.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libnrnmech.so.0" && ln -s "libnrnmech.so.0.0.0" "libnrnmech.so.0") libtool: link: (cd ".libs" && rm -f "libnrnmech.so" && ln -s "libnrnmech.so.0.0.0" "libnrnmech.so") libtool: link: ar cru .libs/libnrnmech.a expsyni.o sinsyn.o mod_func.o libtool: link: ranlib .libs/libnrnmech.a libtool: link: ( cd ".libs" && rm -f "libnrnmech.la" && ln -s "../libnrnmech.la" "libnrnmech.la" ) Successfully created x86_64/special running install running install_lib creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8 creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/alias_method.cpython-38-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/run_simulation.cpython-38-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 creating /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/sinsyn.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/mod_func.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.so.0.0.0 -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.so.0 -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.so -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.lai -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.la -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/libnrnmech.a -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/.libs/expsyni.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/special -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/sinsyn.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/sinsyn.mod -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/sinsyn.lo -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/sinsyn.c -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/mod_func.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/mod_func.lo -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/mod_func.c -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/libnrnmech.la -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/expsyni.o -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/expsyni.mod -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/expsyni.lo -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/x86_64/expsyni.c -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.8/LFPy/test/test_tools.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_templatecell.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_recextelectrode.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_pointprocess.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_networkcell.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_network.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_misc.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_lfpcalc.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_inputgenerators.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_eegmegcalc.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_cell.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/test_alias_method.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/sticks_not_connected_head_to_toe.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/stick_template.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/stick.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/sinsyn.mod -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/fem_mix_dip.npz -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/expsyni.mod -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/common.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/ball_and_sticks_w_lists.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/ball_and_sticks.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/ball_and_stick_template.hoc -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/test/__init__.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test copying build/lib.linux-x86_64-3.8/LFPy/run_simulation.pyx -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/run_simulation.c -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/alias_method.pyx -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/alias_method.c -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/tools.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/templatecell.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/run_simulation.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/recextelectrode.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/pointprocess.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/network.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/lfpcalc.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/inputgenerators.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/eegmegcalc.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/cell.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/alias_method.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy copying build/lib.linux-x86_64-3.8/LFPy/__init__.py -> /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_tools.py to test_tools.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_templatecell.py to test_templatecell.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_recextelectrode.py to test_recextelectrode.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_pointprocess.py to test_pointprocess.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_networkcell.py to test_networkcell.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_network.py to test_network.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_misc.py to test_misc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_lfpcalc.py to test_lfpcalc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_inputgenerators.py to test_inputgenerators.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_eegmegcalc.py to test_eegmegcalc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_cell.py to test_cell.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/test_alias_method.py to test_alias_method.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/common.py to common.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/tools.py to tools.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/templatecell.py to templatecell.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/run_simulation.py to run_simulation.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py to recextelectrode.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/pointprocess.py to pointprocess.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/network.py to network.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/lfpcalc.py to lfpcalc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/inputgenerators.py to inputgenerators.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/eegmegcalc.py to eegmegcalc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/cell.py to cell.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/alias_method.py to alias_method.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/__init__.py to __init__.cpython-38.pyc writing byte-compilation script '/tmp/tmpwx7kksft.py' /usr/bin/python3 /tmp/tmpwx7kksft.py /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:463: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:537: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:544: SyntaxWarning: "is" with a literal. Did you mean "=="? removing /tmp/tmpwx7kksft.py running install_egg_info running egg_info writing LFPy.egg-info/PKG-INFO writing dependency_links to LFPy.egg-info/dependency_links.txt writing requirements to LFPy.egg-info/requires.txt writing top-level names to LFPy.egg-info/top_level.txt skipping 'LFPy/run_simulation.c' Cython extension (up-to-date) skipping 'LFPy/alias_method.c' Cython extension (up-to-date) reading manifest file 'LFPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:463: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:537: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:544: SyntaxWarning: "is" with a literal. Did you mean "=="? warning: no files found matching 'x86_64' under directory 'LFPy/test' warning: no files found matching 'morphologies' under directory 'examples' warning: no files found matching '*' under directory 'documentation' warning: no files found matching '*' under directory 'html' writing manifest file 'LFPy.egg-info/SOURCES.txt' Copying LFPy.egg-info to /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy-2.0.7-py3.8.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/bin/__pycache__ + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 2.0.7-6.fc33 --unique-debug-suffix -2.0.7-6.fc33.x86_64 --unique-debug-src-base python-lfpy-2.0.7-6.fc33.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/LFPy-2.0.7 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/run_simulation.cpython-38-x86_64-linux-gnu.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/alias_method.cpython-38-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/run_simulation.cpython-38-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/alias_method.cpython-38-x86_64-linux-gnu.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so.0 extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so.0.0.0 original debug info size: 1560kB, size after compression: 1480kB /usr/lib/rpm/sepdebugcrcfix: Updated 5 CRC32s, 0 CRC32s did match. 2513 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib/debug/usr/lib64/python3.8 using /usr/bin/python3.8 Bytecompiling .py files below /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib64/python3.8 using /usr/bin/python3.8 /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:463: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:537: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:544: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:463: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:537: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/LFPy/recextelectrode.py:544: SyntaxWarning: "is" with a literal. Did you mean "=="? + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/python3.8/site-packages/LFPy/test/x86_64/special from /bin/sh to #!/usr/bin/sh Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.fAG8eu + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.0.7 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 1094 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + pytest-3.8 LFPy/test/test_alias_method.py LFPy/test/test_cell.py LFPy/test/test_eegmegcalc.py LFPy/test/test_inputgenerators.py LFPy/test/test_lfpcalc.py LFPy/test/test_misc.py LFPy/test/test_network.py LFPy/test/test_networkcell.py LFPy/test/test_pointprocess.py LFPy/test/test_recextelectrode.py LFPy/test/test_templatecell.py LFPy/test/test_tools.py ============================= test session starts ============================== platform linux -- Python 3.8.3, pytest-4.6.10, py-1.8.0, pluggy-0.13.0 rootdir: /builddir/build/BUILD/LFPy-2.0.7 collected 294 items LFPy/test/test_alias_method.py ..... [ 1%] LFPy/test/test_cell.py ................................................. [ 18%] ............................... [ 28%] LFPy/test/test_eegmegcalc.py ................................. [ 40%] LFPy/test/test_inputgenerators.py . [ 40%] LFPy/test/test_lfpcalc.py ...................... [ 47%] LFPy/test/test_misc.py .. [ 48%] LFPy/test/test_network.py ....... [ 51%] LFPy/test/test_networkcell.py .......................................... [ 65%] ............... [ 70%] LFPy/test/test_pointprocess.py ........... [ 74%] LFPy/test/test_recextelectrode.py ................. [ 79%] LFPy/test/test_templatecell.py ......................................... [ 93%] ................ [ 99%] LFPy/test/test_tools.py .. [100%] =============================== warnings summary =============================== LFPy/recextelectrode.py:554 /builddir/build/BUILD/LFPy-2.0.7/LFPy/recextelectrode.py:554: DeprecationWarning: invalid escape sequence \- """class RecMEAElectrode LFPy/recextelectrode.py:463 /builddir/build/BUILD/LFPy-2.0.7/LFPy/recextelectrode.py:463: SyntaxWarning: "is" with a literal. Did you mean "=="? if self.contact_shape is 'circle': LFPy/recextelectrode.py:476 /builddir/build/BUILD/LFPy-2.0.7/LFPy/recextelectrode.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? elif self.contact_shape is 'square': LFPy/recextelectrode.py:537 /builddir/build/BUILD/LFPy-2.0.7/LFPy/recextelectrode.py:537: SyntaxWarning: "is" with a literal. Did you mean "=="? if self.contact_shape is 'circle': LFPy/recextelectrode.py:544 /builddir/build/BUILD/LFPy-2.0.7/LFPy/recextelectrode.py:544: SyntaxWarning: "is" with a literal. Did you mean "=="? elif self.contact_shape is 'square': LFPy/cell.py:32 /builddir/build/BUILD/LFPy-2.0.7/LFPy/cell.py:32: UserWarning: LFPy could not read NEURON version info. v7.6.4 or newer required warn('LFPy could not read NEURON version info. v7.6.4 or newer required') LFPy/eegmegcalc.py:1240 /builddir/build/BUILD/LFPy-2.0.7/LFPy/eegmegcalc.py:1240: DeprecationWarning: invalid escape sequence \m """ LFPy/test/test_eegmegcalc.py::testFourSphereVolumeConductor::test_rz_params /builddir/build/BUILD/LFPy-2.0.7/LFPy/eegmegcalc.py:399: RuntimeWarning: invalid value encountered in true_divide self._z = self._rzloc/self._rz LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource 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LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs /builddir/build/BUILD/LFPy-2.0.7/LFPy/test/common.py:275: DeprecationWarning: scipy.real is deprecated and will be removed in SciPy 2.0.0, use numpy.real instead return real(func(x)) LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource 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LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs /builddir/build/BUILD/LFPy-2.0.7/LFPy/test/common.py:277: DeprecationWarning: scipy.imag is deprecated and will be removed in SciPy 2.0.0, use numpy.imag instead return imag(func(x)) -- Docs: https://docs.pytest.org/en/latest/warnings.html ================= 294 passed, 26090 warnings in 166.57 seconds ================= + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 1094 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 1094 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + pytest-3.8 LFPy/test/test_alias_method.py LFPy/test/test_cell.py LFPy/test/test_eegmegcalc.py LFPy/test/test_inputgenerators.py LFPy/test/test_lfpcalc.py LFPy/test/test_misc.py LFPy/test/test_network.py LFPy/test/test_networkcell.py LFPy/test/test_pointprocess.py LFPy/test/test_recextelectrode.py LFPy/test/test_templatecell.py LFPy/test/test_tools.py ============================= test session starts ============================== platform linux -- Python 3.8.3, pytest-4.6.10, py-1.8.0, pluggy-0.13.0 rootdir: /builddir/build/BUILD/LFPy-2.0.7 collected 294 items LFPy/test/test_alias_method.py ..... [ 1%] LFPy/test/test_cell.py ................................................. [ 18%] ............................... [ 28%] LFPy/test/test_eegmegcalc.py ................................. [ 40%] LFPy/test/test_inputgenerators.py . [ 40%] LFPy/test/test_lfpcalc.py ...................... [ 47%] LFPy/test/test_misc.py .. [ 48%] LFPy/test/test_network.py ....... [ 51%] LFPy/test/test_networkcell.py .......................................... [ 65%] ............... [ 70%] LFPy/test/test_pointprocess.py ........... [ 74%] LFPy/test/test_recextelectrode.py ................. [ 79%] LFPy/test/test_templatecell.py ......................................... [ 93%] ................ [ 99%] LFPy/test/test_tools.py .. [100%] =============================== warnings summary =============================== LFPy/cell.py:32 /builddir/build/BUILD/LFPy-2.0.7/LFPy/cell.py:32: UserWarning: LFPy could not read NEURON version info. v7.6.4 or newer required warn('LFPy could not read NEURON version info. v7.6.4 or newer required') LFPy/test/test_eegmegcalc.py::testFourSphereVolumeConductor::test_rz_params /builddir/build/BUILD/LFPy-2.0.7/LFPy/eegmegcalc.py:399: RuntimeWarning: invalid value encountered in true_divide self._z = self._rzloc/self._rz LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource 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LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs /builddir/build/BUILD/LFPy-2.0.7/LFPy/test/common.py:275: DeprecationWarning: scipy.real is deprecated and will be removed in SciPy 2.0.0, use numpy.real instead return real(func(x)) LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_linesource 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LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs LFPy/test/test_recextelectrode.py::testRecExtElectrode::test_method_soma_as_point_dotprodcoeffs /builddir/build/BUILD/LFPy-2.0.7/LFPy/test/common.py:277: DeprecationWarning: scipy.imag is deprecated and will be removed in SciPy 2.0.0, use numpy.imag instead return imag(func(x)) -- Docs: https://docs.pytest.org/en/latest/warnings.html ================= 294 passed, 26084 warnings in 174.24 seconds ================= + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 1094 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + rm -rf /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64//usr/lib64/python3.8/site-packages/LFPy/test/ Processing files: python3-lfpy-2.0.7-6.fc33.x86_64 + rm -rf /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/lib/debug//usr/lib64/python3.8/site-packages/LFPy/test/ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.DfY9lv + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.0.7 + DOCDIR=/builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/doc/python3-lfpy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/doc/python3-lfpy + cp -pr README.md /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/doc/python3-lfpy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2lGmNv + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.0.7 + LICENSEDIR=/builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/licenses/python3-lfpy + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/licenses/python3-lfpy + cp -pr LICENSE /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64/usr/share/licenses/python3-lfpy + RPM_EC=0 ++ jobs -p + exit 0 Provides: python3-lfpy = 2.0.7-6.fc33 python3-lfpy(x86-64) = 2.0.7-6.fc33 python3.8dist(lfpy) = 2.0.7 python3dist(lfpy) = 2.0.7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) python(abi) = 3.8 python3.8dist(cython) >= 0.20 python3.8dist(h5py) >= 2.5 python3.8dist(numpy) >= 1.8 python3.8dist(scipy) >= 0.14 rtld(GNU_HASH) Processing files: python-lfpy-debugsource-2.0.7-6.fc33.x86_64 Provides: python-lfpy-debugsource = 2.0.7-6.fc33 python-lfpy-debugsource(x86-64) = 2.0.7-6.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-lfpy-debuginfo-2.0.7-6.fc33.x86_64 Provides: debuginfo(build-id) = 350dd0d75a241192ffc869f6290948d895bdad06 debuginfo(build-id) = 3a1841f6f6523b621f74440b6309cd216feea4de python-lfpy-debuginfo = 2.0.7-6.fc33 python3-lfpy-debuginfo = 2.0.7-6.fc33 python3-lfpy-debuginfo(x86-64) = 2.0.7-6.fc33 python3.8-lfpy-debuginfo = 2.0.7-6.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-lfpy-debugsource(x86-64) = 2.0.7-6.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 Wrote: /builddir/build/RPMS/python-lfpy-debugsource-2.0.7-6.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-lfpy-2.0.7-6.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-lfpy-debuginfo-2.0.7-6.fc33.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.RyHnft + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.0.7 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-lfpy-2.0.7-6.fc33.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-lfpy-2.0.7-6.fc33.src.rpm Finish: build phase for python-lfpy-2.0.7-6.fc33.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1590472920.299246/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1590472920.299246/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1590472920.299246/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/python-lfpy-2.0.7-6.fc33.src.rpm) Config(child) 6 minutes 56 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run