Warning: Permanently added '18.209.29.149' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1409225 --chroot fedora-rawhide-x86_64 --detached Version: 0.38 Task: {'build_id': 1409225, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': 'ac21d9a895561aeabd39789f3b7050768ef4d011', 'git_repo': 'dormouse/Cython-3.0_py38/petsc4py', 'memory_reqs': 2048, 'package_name': 'petsc4py', 'package_version': '3.13.0-2.fc31', 'project_dirname': 'Cython-3.0_py38', 'project_name': 'Cython-3.0_py38', 'project_owner': 'dormouse', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dormouse/Cython-3.0_py38/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'dormouse/Cython-3.0_py38--https://src.fedoraproject.org/user/churchyard', 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/petsc4py.git', 'committish': 'ac21d9a895561aeabd39789f3b7050768ef4d011'}, 'source_type': 8, 'submitter': 'https://src.fedoraproject.org/user/churchyard', 'task_id': '1409225-fedora-rawhide-x86_64', 'timeout': 86400, 'use_bootstrap_container': False, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/petsc4py.git /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/petsc4py.git', '/tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py'... Running: git checkout ac21d9a895561aeabd39789f3b7050768ef4d011 cmd: ['git', 'checkout', 'ac21d9a895561aeabd39789f3b7050768ef4d011'] cwd: /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py rc: 0 stdout: stderr: Note: switching to 'ac21d9a895561aeabd39789f3b7050768ef4d011'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at ac21d9a automatic import of petsc4py Running: cp -r . /tmp/copr-rpmbuild-5tuv14cn cmd: ['cp', '-r', '.', '/tmp/copr-rpmbuild-5tuv14cn'] cwd: /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/.config/rpkg.conf Running: rpkg -C /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/.config/rpkg.conf sources --outdir /tmp/copr-rpmbuild-5tuv14cn cmd: ['rpkg', '-C', '/tmp/copr-rpmbuild-5tuv14cn/obtain-sources/.config/rpkg.conf', 'sources', '--outdir', '/tmp/copr-rpmbuild-5tuv14cn'] cwd: /tmp/copr-rpmbuild-5tuv14cn/obtain-sources/petsc4py rc: 0 stdout: Downloading petsc4py-3.13.0.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=86400): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-5tuv14cn/petsc4py.spec --sources /tmp/copr-rpmbuild-5tuv14cn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1590465738.840458 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-5tuv14cn/petsc4py.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1590465738.840458/root. INFO: calling preinit hooks INFO: enabled root cache INFO: /var/lib/copr-rpmbuild/results/configs/child.cfg newer than root cache; cache will be rebuilt INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 27 kB/s | 3.7 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 9.9 kB/s | 3.8 kB 00:00 fedora 37 kB/s | 12 kB 00:00 Dependencies resolved. ============================================================================================================================================== Package Arch Version Repository Size ============================================================================================================================================== Installing group/module packages: bash  x86_64 5.0.11-2.fc32 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3.8-8.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19 k qt5-srpm-macros  noarch 5.14.2-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k readline  x86_64 8.0-4.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207 k rpm  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503 k rpm-build-libs  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k rpm-libs  x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 332 k rust-srpm-macros  noarch 15-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.7 k setup  noarch 2.13.6-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k sqlite-libs  x86_64 3.32.0-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 614 k systemd-libs  x86_64 245.5-2.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 558 k tzdata  noarch 2020a-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 430 k xxhash-libs  x86_64 0.7.3-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29 k xz-libs  x86_64 5.2.5-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90 k zip  x86_64 3.0-26.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 260 k zlib  x86_64 1.2.11-21.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k zstd  x86_64 1.4.5-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 601 k Installing Groups: Buildsystem building group Transaction Summary ============================================================================================================================================== Install 144 Packages Total size: 57 M Installed size: 229 M Downloading Packages: [SKIPPED] alternatives-1.11-6.fc32.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-9.fc32.noarch.rpm: Already downloaded [SKIPPED] bash-5.0.11-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.34.0-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.34.0-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2020.2.40-3.fc32.noarch.rpm: Already downloaded [SKIPPED] coreutils-8.32-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-8.32-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.6-22.fc32.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20200312-1.git3ae59d2.fc33.noarch.rpm: Already downloaded [SKIPPED] curl-7.70.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.27-5.fc33.x86_64.rpm: Already 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redhat-rpm-config-155-1.fc33.noarch.rpm: Already downloaded [SKIPPED] rpm-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rust-srpm-macros-15-1.fc33.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] setup-2.13.6-2.fc32.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.8.1-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.32.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] tar-1.32-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2020a-1.fc33.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-47.fc32.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.35.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-19.fc33.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.7.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-26.fc32.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.11-21.fc32.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.4.5-3.fc33.x86_64.rpm: Already downloaded Running transaction check warning: Generating 18 missing index(es), please wait... Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.14-2.fc32.x86_64 1/1 Preparing : 1/1 Installing : libgcc-10.1.1-1.fc33.x86_64 1/144 Running scriptlet: libgcc-10.1.1-1.fc33.x86_64 1/144 Installing : fedora-release-identity-basic-33-0.8.noarch 2/144 Installing : tzdata-2020a-1.fc33.noarch 3/144 Installing : rust-srpm-macros-15-1.fc33.noarch 4/144 Installing : qt5-srpm-macros-5.14.2-3.fc33.noarch 5/144 Installing : publicsuffix-list-dafsa-20190417-3.fc32.noarch 6/144 Installing : pkgconf-m4-1.7.0-1.fc33.noarch 7/144 Installing : perl-srpm-macros-1-34.fc32.noarch 8/144 Installing : pcre2-syntax-10.35-1.fc33.noarch 9/144 Installing : openblas-srpm-macros-2-7.fc32.noarch 10/144 Installing : ocaml-srpm-macros-6-2.fc32.noarch 11/144 Installing : nim-srpm-macros-3-2.fc32.noarch 12/144 Installing : ncurses-base-6.2-1.20200222.fc33.noarch 13/144 Installing : libssh-config-0.9.4-2.fc33.noarch 14/144 Installing : gnat-srpm-macros-4-11.fc32.noarch 15/144 Installing : 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67/144 Installing : tar-2:1.32-4.fc32.x86_64 68/144 Installing : zip-3.0-26.fc32.x86_64 69/144 Installing : libpsl-0.21.0-4.fc32.x86_64 70/144 Installing : dwz-0.13-2.fc32.x86_64 71/144 Installing : gc-8.0.4-3.fc32.x86_64 72/144 Installing : zstd-1.4.5-3.fc33.x86_64 73/144 Installing : libxml2-2.9.10-4.fc33.x86_64 74/144 Installing : bzip2-1.0.8-2.fc32.x86_64 75/144 Installing : elfutils-default-yama-scope-0.179-2.fc33.noarch 76/144 Running scriptlet: elfutils-default-yama-scope-0.179-2.fc33.noarch 76/144 Installing : elfutils-libs-0.179-2.fc33.x86_64 77/144 Installing : elfutils-0.179-2.fc33.x86_64 78/144 Installing : ncurses-6.2-1.20200222.fc33.x86_64 79/144 Installing : cpio-2.13-5.fc33.x86_64 80/144 Installing : diffutils-3.7-4.fc32.x86_64 81/144 Installing : expat-2.2.8-2.fc32.x86_64 82/144 Installing : libmetalink-0.1.3-10.fc32.x86_64 83/144 Installing : keyutils-libs-1.6-4.fc32.x86_64 84/144 Installing : libbrotli-1.0.7-10.fc32.x86_64 85/144 Installing : libgomp-10.1.1-1.fc33.x86_64 86/144 Installing : libgpg-error-1.37-1.fc33.x86_64 87/144 Installing : libgcrypt-1.8.5-6.fc33.x86_64 88/144 Installing : libnghttp2-1.40.0-2.fc32.x86_64 89/144 Installing : libpkgconf-1.7.0-1.fc33.x86_64 90/144 Installing : pkgconf-1.7.0-1.fc33.x86_64 91/144 Installing : pkgconf-pkg-config-1.7.0-1.fc33.x86_64 92/144 Installing : gmp-1:6.2.0-1.fc33.x86_64 93/144 Installing : mpfr-4.0.2-4.fc33.x86_64 94/144 Installing : libsigsegv-2.11-10.fc32.x86_64 95/144 Installing : gawk-5.0.1-7.fc32.x86_64 96/144 Installing : libsmartcols-2.35.2-1.fc33.x86_64 97/144 Installing : libtasn1-4.16.0-1.fc32.x86_64 98/144 Installing : p11-kit-trust-0.23.20-1.fc32.x86_64 99/144 Running scriptlet: p11-kit-trust-0.23.20-1.fc32.x86_64 99/144 Installing : libtool-ltdl-2.4.6-34.fc33.x86_64 100/144 Installing : libverto-0.3.0-9.fc32.x86_64 101/144 Installing : pcre-8.44-1.fc33.x86_64 102/144 Installing : grep-3.4-1.fc33.x86_64 103/144 Installing : xz-5.2.5-1.fc33.x86_64 104/144 Installing : xxhash-libs-0.7.3-1.fc33.x86_64 105/144 Installing : gdb-minimal-9.1-6.fc33.x86_64 106/144 Installing : coreutils-common-8.32-6.fc33.x86_64 107/144 Installing : openssl-libs-1:1.1.1g-6.fc33.x86_64 108/144 Installing : coreutils-8.32-6.fc33.x86_64 109/144 Installing : crypto-policies-20200312-1.git3ae59d2.fc33.noarc 110/144 Running scriptlet: ca-certificates-2020.2.40-3.fc32.noarch 111/144 Installing : ca-certificates-2020.2.40-3.fc32.noarch 111/144 Running scriptlet: ca-certificates-2020.2.40-3.fc32.noarch 111/144 Installing : krb5-libs-1.18.1-6.fc33.x86_64 112/144 Installing : libblkid-2.35.2-1.fc33.x86_64 113/144 Running scriptlet: libblkid-2.35.2-1.fc33.x86_64 113/144 Installing : libtirpc-1.2.6-0.fc33.x86_64 114/144 Installing : binutils-gold-2.34.0-5.fc33.x86_64 115/144 Installing : binutils-2.34.0-5.fc33.x86_64 116/144 Running scriptlet: binutils-2.34.0-5.fc33.x86_64 116/144 Installing : gzip-1.10-2.fc32.x86_64 117/144 Installing : cracklib-2.9.6-22.fc32.x86_64 118/144 Installing : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 119/144 Installing : libpwquality-1.4.2-2.fc32.x86_64 120/144 Installing : pam-1.3.1-26.fc33.x86_64 121/144 Installing : libfdisk-2.35.2-1.fc33.x86_64 122/144 Installing : libmount-2.35.2-1.fc33.x86_64 123/144 Installing : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 124/144 Installing : openldap-2.4.47-4.fc32.x86_64 125/144 Installing : libssh-0.9.4-2.fc33.x86_64 126/144 Installing : libcurl-7.70.0-1.fc33.x86_64 127/144 Installing : curl-7.70.0-1.fc33.x86_64 128/144 Installing : guile22-2.2.6-4.fc32.x86_64 129/144 Running scriptlet: guile22-2.2.6-4.fc32.x86_64 129/144 Installing : systemd-libs-245.5-2.fc33.x86_64 130/144 Running scriptlet: systemd-libs-245.5-2.fc33.x86_64 130/144 Installing : libarchive-3.4.3-1.fc33.x86_64 131/144 Installing : rpm-4.15.90-0.git14971.12.fc33.x86_64 132/144 Installing : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 133/144 Installing : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 134/144 Installing : efi-srpm-macros-4-4.fc32.noarch 135/144 Installing : fonts-srpm-macros-1:2.0.5-3.fc33.noarch 136/144 Installing : go-srpm-macros-3.0.8-5.fc32.noarch 137/144 Installing : python-srpm-macros-3.8-8.fc33.noarch 138/144 Installing : redhat-rpm-config-155-1.fc33.noarch 139/144 Installing : rpm-build-4.15.90-0.git14971.12.fc33.x86_64 140/144 Installing : util-linux-2.35.2-1.fc33.x86_64 141/144 Running scriptlet: util-linux-2.35.2-1.fc33.x86_64 141/144 Installing : make-1:4.3-1.fc33.x86_64 142/144 Installing : info-6.7-7.fc33.x86_64 143/144 Installing : which-2.21-19.fc33.x86_64 144/144 Running scriptlet: filesystem-3.14-2.fc32.x86_64 144/144 Running scriptlet: rpm-4.15.90-0.git14971.12.fc33.x86_64 144/144 Running scriptlet: which-2.21-19.fc33.x86_64 144/144 Verifying : alternatives-1.11-6.fc32.x86_64 1/144 Verifying : audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_ 2/144 Verifying : basesystem-11-9.fc32.noarch 3/144 Verifying : bash-5.0.11-2.fc32.x86_64 4/144 Verifying : binutils-2.34.0-5.fc33.x86_64 5/144 Verifying : binutils-gold-2.34.0-5.fc33.x86_64 6/144 Verifying : bzip2-1.0.8-2.fc32.x86_64 7/144 Verifying : bzip2-libs-1.0.8-2.fc32.x86_64 8/144 Verifying : ca-certificates-2020.2.40-3.fc32.noarch 9/144 Verifying : coreutils-8.32-6.fc33.x86_64 10/144 Verifying : coreutils-common-8.32-6.fc33.x86_64 11/144 Verifying : cpio-2.13-5.fc33.x86_64 12/144 Verifying : cracklib-2.9.6-22.fc32.x86_64 13/144 Verifying : crypto-policies-20200312-1.git3ae59d2.fc33.noarc 14/144 Verifying : curl-7.70.0-1.fc33.x86_64 15/144 Verifying : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 16/144 Verifying : diffutils-3.7-4.fc32.x86_64 17/144 Verifying : dwz-0.13-2.fc32.x86_64 18/144 Verifying : efi-srpm-macros-4-4.fc32.noarch 19/144 Verifying : elfutils-0.179-2.fc33.x86_64 20/144 Verifying : elfutils-default-yama-scope-0.179-2.fc33.noarch 21/144 Verifying : elfutils-libelf-0.179-2.fc33.x86_64 22/144 Verifying : elfutils-libs-0.179-2.fc33.x86_64 23/144 Verifying : expat-2.2.8-2.fc32.x86_64 24/144 Verifying : fedora-gpg-keys-33-0.5.noarch 25/144 Verifying : fedora-release-33-0.8.noarch 26/144 Verifying : fedora-release-common-33-0.8.noarch 27/144 Verifying : fedora-release-identity-basic-33-0.8.noarch 28/144 Verifying : fedora-repos-33-0.5.noarch 29/144 Verifying : fedora-repos-rawhide-33-0.5.noarch 30/144 Verifying : file-5.38-3.fc33.x86_64 31/144 Verifying : file-libs-5.38-3.fc33.x86_64 32/144 Verifying : filesystem-3.14-2.fc32.x86_64 33/144 Verifying : findutils-1:4.7.0-4.fc33.x86_64 34/144 Verifying : fonts-srpm-macros-1:2.0.5-3.fc33.noarch 35/144 Verifying : fpc-srpm-macros-1.3-1.fc32.noarch 36/144 Verifying : gawk-5.0.1-7.fc32.x86_64 37/144 Verifying : gc-8.0.4-3.fc32.x86_64 38/144 Verifying : gdb-minimal-9.1-6.fc33.x86_64 39/144 Verifying : ghc-srpm-macros-1.5.0-2.fc32.noarch 40/144 Verifying : glibc-2.31.9000-13.fc33.x86_64 41/144 Verifying : glibc-common-2.31.9000-13.fc33.x86_64 42/144 Verifying : glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 43/144 Verifying : gmp-1:6.2.0-1.fc33.x86_64 44/144 Verifying : gnat-srpm-macros-4-11.fc32.noarch 45/144 Verifying : go-srpm-macros-3.0.8-5.fc32.noarch 46/144 Verifying : grep-3.4-1.fc33.x86_64 47/144 Verifying : guile22-2.2.6-4.fc32.x86_64 48/144 Verifying : gzip-1.10-2.fc32.x86_64 49/144 Verifying : info-6.7-7.fc33.x86_64 50/144 Verifying : keyutils-libs-1.6-4.fc32.x86_64 51/144 Verifying : krb5-libs-1.18.1-6.fc33.x86_64 52/144 Verifying : libacl-2.2.53-5.fc32.x86_64 53/144 Verifying : libarchive-3.4.3-1.fc33.x86_64 54/144 Verifying : libattr-2.4.48-8.fc32.x86_64 55/144 Verifying : libblkid-2.35.2-1.fc33.x86_64 56/144 Verifying : libbrotli-1.0.7-10.fc32.x86_64 57/144 Verifying : libcap-2.26-7.fc32.x86_64 58/144 Verifying : libcap-ng-0.7.10-2.fc32.x86_64 59/144 Verifying : libcom_err-1.45.6-2.fc33.x86_64 60/144 Verifying : libcurl-7.70.0-1.fc33.x86_64 61/144 Verifying : libdb-5.3.28-40.fc32.x86_64 62/144 Verifying : libfdisk-2.35.2-1.fc33.x86_64 63/144 Verifying : libffi-3.1-25.fc33.x86_64 64/144 Verifying : libgcc-10.1.1-1.fc33.x86_64 65/144 Verifying : libgcrypt-1.8.5-6.fc33.x86_64 66/144 Verifying : libgomp-10.1.1-1.fc33.x86_64 67/144 Verifying : libgpg-error-1.37-1.fc33.x86_64 68/144 Verifying : libidn2-2.3.0-2.fc32.x86_64 69/144 Verifying : libmetalink-0.1.3-10.fc32.x86_64 70/144 Verifying : libmount-2.35.2-1.fc33.x86_64 71/144 Verifying : libnghttp2-1.40.0-2.fc32.x86_64 72/144 Verifying : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 73/144 Verifying : libpkgconf-1.7.0-1.fc33.x86_64 74/144 Verifying : libpsl-0.21.0-4.fc32.x86_64 75/144 Verifying : libpwquality-1.4.2-2.fc32.x86_64 76/144 Verifying : libselinux-3.0-4.fc33.x86_64 77/144 Verifying : libsemanage-3.0-3.fc32.x86_64 78/144 Verifying : libsepol-3.0-3.fc32.x86_64 79/144 Verifying : libsigsegv-2.11-10.fc32.x86_64 80/144 Verifying : libsmartcols-2.35.2-1.fc33.x86_64 81/144 Verifying : libssh-0.9.4-2.fc33.x86_64 82/144 Verifying : libssh-config-0.9.4-2.fc33.noarch 83/144 Verifying : libstdc++-10.1.1-1.fc33.x86_64 84/144 Verifying : libtasn1-4.16.0-1.fc32.x86_64 85/144 Verifying : libtirpc-1.2.6-0.fc33.x86_64 86/144 Verifying : libtool-ltdl-2.4.6-34.fc33.x86_64 87/144 Verifying : libunistring-0.9.10-7.fc32.x86_64 88/144 Verifying : libutempter-1.1.6-18.fc32.x86_64 89/144 Verifying : libuuid-2.35.2-1.fc33.x86_64 90/144 Verifying : libverto-0.3.0-9.fc32.x86_64 91/144 Verifying : libxcrypt-4.4.16-3.fc33.x86_64 92/144 Verifying : libxml2-2.9.10-4.fc33.x86_64 93/144 Verifying : libzstd-1.4.5-3.fc33.x86_64 94/144 Verifying : lua-libs-5.3.5-7.fc32.x86_64 95/144 Verifying : lz4-libs-1.9.1-2.fc32.x86_64 96/144 Verifying : make-1:4.3-1.fc33.x86_64 97/144 Verifying : mpfr-4.0.2-4.fc33.x86_64 98/144 Verifying : ncurses-6.2-1.20200222.fc33.x86_64 99/144 Verifying : ncurses-base-6.2-1.20200222.fc33.noarch 100/144 Verifying : ncurses-libs-6.2-1.20200222.fc33.x86_64 101/144 Verifying : nim-srpm-macros-3-2.fc32.noarch 102/144 Verifying : ocaml-srpm-macros-6-2.fc32.noarch 103/144 Verifying : openblas-srpm-macros-2-7.fc32.noarch 104/144 Verifying : openldap-2.4.47-4.fc32.x86_64 105/144 Verifying : openssl-libs-1:1.1.1g-6.fc33.x86_64 106/144 Verifying : p11-kit-0.23.20-1.fc32.x86_64 107/144 Verifying : p11-kit-trust-0.23.20-1.fc32.x86_64 108/144 Verifying : pam-1.3.1-26.fc33.x86_64 109/144 Verifying : patch-2.7.6-12.fc32.x86_64 110/144 Verifying : pcre-8.44-1.fc33.x86_64 111/144 Verifying : pcre2-10.35-1.fc33.x86_64 112/144 Verifying : pcre2-syntax-10.35-1.fc33.noarch 113/144 Verifying : perl-srpm-macros-1-34.fc32.noarch 114/144 Verifying : pkgconf-1.7.0-1.fc33.x86_64 115/144 Verifying : pkgconf-m4-1.7.0-1.fc33.noarch 116/144 Verifying : pkgconf-pkg-config-1.7.0-1.fc33.x86_64 117/144 Verifying : popt-1.16-19.fc32.x86_64 118/144 Verifying : publicsuffix-list-dafsa-20190417-3.fc32.noarch 119/144 Verifying : python-srpm-macros-3.8-8.fc33.noarch 120/144 Verifying : qt5-srpm-macros-5.14.2-3.fc33.noarch 121/144 Verifying : readline-8.0-4.fc32.x86_64 122/144 Verifying : redhat-rpm-config-155-1.fc33.noarch 123/144 Verifying : rpm-4.15.90-0.git14971.12.fc33.x86_64 124/144 Verifying : rpm-build-4.15.90-0.git14971.12.fc33.x86_64 125/144 Verifying : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 126/144 Verifying : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 127/144 Verifying : rust-srpm-macros-15-1.fc33.noarch 128/144 Verifying : sed-4.8-1.fc33.x86_64 129/144 Verifying : setup-2.13.6-2.fc32.noarch 130/144 Verifying : shadow-utils-2:4.8.1-3.fc33.x86_64 131/144 Verifying : sqlite-libs-3.32.0-1.fc33.x86_64 132/144 Verifying : systemd-libs-245.5-2.fc33.x86_64 133/144 Verifying : tar-2:1.32-4.fc32.x86_64 134/144 Verifying : tzdata-2020a-1.fc33.noarch 135/144 Verifying : unzip-6.0-47.fc32.x86_64 136/144 Verifying : util-linux-2.35.2-1.fc33.x86_64 137/144 Verifying : which-2.21-19.fc33.x86_64 138/144 Verifying : xxhash-libs-0.7.3-1.fc33.x86_64 139/144 Verifying : xz-5.2.5-1.fc33.x86_64 140/144 Verifying : xz-libs-5.2.5-1.fc33.x86_64 141/144 Verifying : zip-3.0-26.fc32.x86_64 142/144 Verifying : zlib-1.2.11-21.fc32.x86_64 143/144 Verifying : zstd-1.4.5-3.fc33.x86_64 144/144 Installed: alternatives-1.11-6.fc32.x86_64 audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64 basesystem-11-9.fc32.noarch bash-5.0.11-2.fc32.x86_64 binutils-2.34.0-5.fc33.x86_64 binutils-gold-2.34.0-5.fc33.x86_64 bzip2-1.0.8-2.fc32.x86_64 bzip2-libs-1.0.8-2.fc32.x86_64 ca-certificates-2020.2.40-3.fc32.noarch coreutils-8.32-6.fc33.x86_64 coreutils-common-8.32-6.fc33.x86_64 cpio-2.13-5.fc33.x86_64 cracklib-2.9.6-22.fc32.x86_64 crypto-policies-20200312-1.git3ae59d2.fc33.noarch curl-7.70.0-1.fc33.x86_64 cyrus-sasl-lib-2.1.27-5.fc33.x86_64 diffutils-3.7-4.fc32.x86_64 dwz-0.13-2.fc32.x86_64 efi-srpm-macros-4-4.fc32.noarch elfutils-0.179-2.fc33.x86_64 elfutils-default-yama-scope-0.179-2.fc33.noarch elfutils-libelf-0.179-2.fc33.x86_64 elfutils-libs-0.179-2.fc33.x86_64 expat-2.2.8-2.fc32.x86_64 fedora-gpg-keys-33-0.5.noarch fedora-release-33-0.8.noarch fedora-release-common-33-0.8.noarch fedora-release-identity-basic-33-0.8.noarch fedora-repos-33-0.5.noarch fedora-repos-rawhide-33-0.5.noarch file-5.38-3.fc33.x86_64 file-libs-5.38-3.fc33.x86_64 filesystem-3.14-2.fc32.x86_64 findutils-1:4.7.0-4.fc33.x86_64 fonts-srpm-macros-1:2.0.5-3.fc33.noarch fpc-srpm-macros-1.3-1.fc32.noarch gawk-5.0.1-7.fc32.x86_64 gc-8.0.4-3.fc32.x86_64 gdb-minimal-9.1-6.fc33.x86_64 ghc-srpm-macros-1.5.0-2.fc32.noarch glibc-2.31.9000-13.fc33.x86_64 glibc-common-2.31.9000-13.fc33.x86_64 glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 gmp-1:6.2.0-1.fc33.x86_64 gnat-srpm-macros-4-11.fc32.noarch go-srpm-macros-3.0.8-5.fc32.noarch grep-3.4-1.fc33.x86_64 guile22-2.2.6-4.fc32.x86_64 gzip-1.10-2.fc32.x86_64 info-6.7-7.fc33.x86_64 keyutils-libs-1.6-4.fc32.x86_64 krb5-libs-1.18.1-6.fc33.x86_64 libacl-2.2.53-5.fc32.x86_64 libarchive-3.4.3-1.fc33.x86_64 libattr-2.4.48-8.fc32.x86_64 libblkid-2.35.2-1.fc33.x86_64 libbrotli-1.0.7-10.fc32.x86_64 libcap-2.26-7.fc32.x86_64 libcap-ng-0.7.10-2.fc32.x86_64 libcom_err-1.45.6-2.fc33.x86_64 libcurl-7.70.0-1.fc33.x86_64 libdb-5.3.28-40.fc32.x86_64 libfdisk-2.35.2-1.fc33.x86_64 libffi-3.1-25.fc33.x86_64 libgcc-10.1.1-1.fc33.x86_64 libgcrypt-1.8.5-6.fc33.x86_64 libgomp-10.1.1-1.fc33.x86_64 libgpg-error-1.37-1.fc33.x86_64 libidn2-2.3.0-2.fc32.x86_64 libmetalink-0.1.3-10.fc32.x86_64 libmount-2.35.2-1.fc33.x86_64 libnghttp2-1.40.0-2.fc32.x86_64 libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 libpkgconf-1.7.0-1.fc33.x86_64 libpsl-0.21.0-4.fc32.x86_64 libpwquality-1.4.2-2.fc32.x86_64 libselinux-3.0-4.fc33.x86_64 libsemanage-3.0-3.fc32.x86_64 libsepol-3.0-3.fc32.x86_64 libsigsegv-2.11-10.fc32.x86_64 libsmartcols-2.35.2-1.fc33.x86_64 libssh-0.9.4-2.fc33.x86_64 libssh-config-0.9.4-2.fc33.noarch libstdc++-10.1.1-1.fc33.x86_64 libtasn1-4.16.0-1.fc32.x86_64 libtirpc-1.2.6-0.fc33.x86_64 libtool-ltdl-2.4.6-34.fc33.x86_64 libunistring-0.9.10-7.fc32.x86_64 libutempter-1.1.6-18.fc32.x86_64 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qt5-srpm-macros-5.14.2-3.fc33.noarch readline-8.0-4.fc32.x86_64 redhat-rpm-config-155-1.fc33.noarch rpm-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 rust-srpm-macros-15-1.fc33.noarch sed-4.8-1.fc33.x86_64 setup-2.13.6-2.fc32.noarch shadow-utils-2:4.8.1-3.fc33.x86_64 sqlite-libs-3.32.0-1.fc33.x86_64 systemd-libs-245.5-2.fc33.x86_64 tar-2:1.32-4.fc32.x86_64 tzdata-2020a-1.fc33.noarch unzip-6.0-47.fc32.x86_64 util-linux-2.35.2-1.fc33.x86_64 which-2.21-19.fc33.x86_64 xxhash-libs-0.7.3-1.fc33.x86_64 xz-5.2.5-1.fc33.x86_64 xz-libs-5.2.5-1.fc33.x86_64 zip-3.0-26.fc32.x86_64 zlib-1.2.11-21.fc32.x86_64 zstd-1.4.5-3.fc33.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Wrote: /builddir/build/SRPMS/petsc4py-3.13.0-2.fc33.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1590465738.840458/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1590465738.840458/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1590465738.840458/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-5tuv14cn/petsc4py.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=86400): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/petsc4py-3.13.0-2.fc33.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1590465762.259594 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/petsc4py-3.13.0-2.fc33.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1590465762.259594/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 134 kB/s | 3.7 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 9.9 kB/s | 3.8 kB 00:00 fedora 38 kB/s | 12 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for petsc4py-3.13.0-2.fc33.src.rpm Start: build setup for petsc4py-3.13.0-2.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Wrote: /builddir/build/SRPMS/petsc4py-3.13.0-2.fc33.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 80 kB/s | 3.7 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 10 kB/s | 3.8 kB 00:00 fedora 41 kB/s | 12 kB 00:00 Dependencies resolved. =================================================================================================================================== Package Arch Version Repository Size =================================================================================================================================== Installing: hdf5-mpich-devel  x86_64 1.10.5-6.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M hdf5-openmpi-devel  x86_64 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k Transaction Summary =================================================================================================================================== Install 169 Packages Total size: 162 M Total download size: 33 M Installed size: 541 M Downloading Packages: [SKIPPED] libibumad-29.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] libibverbs-29.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] librdmacm-29.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] python3-Cython-3.0~a3-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] rdma-core-29.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] Lmod-8.3.13-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] MUMPS-common-5.3.1-1.fc33.noarch.rpm: Already downloaded [SKIPPED] acl-2.2.53-5.fc32.x86_64.rpm: Already downloaded [SKIPPED] annobin-9.21-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.17.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] 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perl-Errno-1.30-453.fc33.x86_64.rpm: Already downloaded [SKIPPED] perl-Exporter-5.74-2.fc32.noarch.rpm: Already downloaded [SKIPPED] perl-PathTools-3.78-441.fc32.x86_64.rpm: Already downloaded [SKIPPED] perl-Scalar-List-Utils-1.55-441.fc33.x86_64.rpm: Already downloaded [SKIPPED] perl-constant-1.33-441.fc32.noarch.rpm: Already downloaded [SKIPPED] perl-interpreter-5.30.2-453.fc33.x86_64.rpm: Already downloaded [SKIPPED] perl-libs-5.30.2-453.fc33.x86_64.rpm: Already downloaded [SKIPPED] perl-macros-5.30.2-453.fc33.noarch.rpm: Already downloaded [SKIPPED] pmix-3.1.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] procps-ng-3.3.15-7.fc32.x86_64.rpm: Already downloaded [SKIPPED] python-pip-wheel-20.1.1-1.fc33.noarch.rpm: Already downloaded [SKIPPED] python-rpm-macros-3.8-8.fc33.noarch.rpm: Already downloaded [SKIPPED] python-setuptools-wheel-46.4.0-1.fc33.noarch.rpm: Already downloaded [SKIPPED] python3-3.8.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] python3-devel-3.8.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] python3-libs-3.8.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] python3-numpy-1.18.4-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] python3-rpm-generators-11-6.fc33.noarch.rpm: Already downloaded [SKIPPED] python3-rpm-macros-3.8-8.fc33.noarch.rpm: Already downloaded [SKIPPED] python3-setuptools-46.4.0-1.fc33.noarch.rpm: Already downloaded [SKIPPED] qrencode-libs-4.0.2-5.fc32.x86_64.rpm: Already downloaded [SKIPPED] rpm-mpi-hooks-6-5.fc32.noarch.rpm: Already downloaded [SKIPPED] scotch-6.0.9-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] systemd-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] systemd-pam-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] systemd-rpm-macros-245.5-2.fc33.noarch.rpm: Already downloaded [SKIPPED] systemd-udev-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] tcl-8.6.10-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] tcsh-6.22.02-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] tk-8.6.10-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] ucx-1.6.1-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] xml-common-0.6.3-54.fc32.noarch.rpm: Already downloaded [SKIPPED] zlib-devel-1.2.11-21.fc32.x86_64.rpm: Already downloaded (150/169): MUMPS-openmpi-5.3.1-1.fc33.x86_64.rp 1.7 MB/s | 1.7 MB 00:01 (151/169): cgnslib-4.1.1-1.fc33.x86_64.rpm 654 kB/s | 811 kB 00:01 (152/169): hypre-mpich-2.18.1-2.fc33.x86_64.rpm 6.1 MB/s | 1.5 MB 00:00 (153/169): hypre-openmpi-2.18.1-2.fc33.x86_64.r 5.5 MB/s | 1.5 MB 00:00 (154/169): petsc-mpich-3.13.1-2.fc33.x86_64.rpm 11 MB/s | 5.5 MB 00:00 (155/169): petsc-mpich-devel-3.13.1-2.fc33.x86_ 9.5 MB/s | 3.1 MB 00:00 (156/169): petsc-openmpi-3.13.1-2.fc33.x86_64.r 14 MB/s | 5.7 MB 00:00 (157/169): petsc-openmpi-devel-3.13.1-2.fc33.x8 14 MB/s | 6.0 MB 00:00 (158/169): ptscotch-mpich-6.0.9-2.fc32.x86_64.r 3.1 MB/s | 518 kB 00:00 (159/169): ptscotch-mpich-devel-6.0.9-2.fc32.x8 114 kB/s | 15 kB 00:00 (160/169): MUMPS-mpich-5.3.1-1.fc33.x86_64.rpm 718 kB/s | 1.7 MB 00:02 (161/169): ptscotch-openmpi-6.0.9-2.fc32.x86_64 2.4 MB/s | 521 kB 00:00 (162/169): ptscotch-openmpi-devel-6.0.9-2.fc32. 115 kB/s | 15 kB 00:00 (163/169): scalapack-common-2.1.0-2.fc32.x86_64 90 kB/s | 18 kB 00:00 (164/169): scalapack-mpich-devel-2.1.0-2.fc32.x 64 kB/s | 8.7 kB 00:00 (165/169): scalapack-mpich-2.1.0-2.fc32.x86_64. 6.0 MB/s | 1.6 MB 00:00 (166/169): scalapack-openmpi-devel-2.1.0-2.fc32 64 kB/s | 8.5 kB 00:00 (167/169): scalapack-openmpi-2.1.0-2.fc32.x86_6 7.9 MB/s | 1.6 MB 00:00 (168/169): superlu_dist-mpich-6.1.1-3.fc33.x86_ 2.4 MB/s | 373 kB 00:00 (169/169): superlu_dist-openmpi-6.1.1-3.fc33.x8 2.5 MB/s | 389 kB 00:00 -------------------------------------------------------------------------------- Total 11 MB/s | 33 MB 00:02 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : perl-Errno-1.30-453.fc33.x86_64 1/169 Installing : perl-Exporter-5.74-2.fc32.noarch 2/169 Installing : perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 3/169 Installing : perl-PathTools-3.78-441.fc32.x86_64 4/169 Installing : perl-constant-1.33-441.fc32.noarch 5/169 Installing : perl-libs-4:5.30.2-453.fc33.x86_64 6/169 Installing : perl-Carp-1.50-440.fc32.noarch 7/169 Installing : libquadmath-10.1.1-1.fc33.x86_64 8/169 Installing : libgfortran-10.1.1-1.fc33.x86_64 9/169 Installing : libnl3-3.5.0-2.fc32.x86_64 10/169 Installing : libaec-1.0.4-3.fc32.x86_64 11/169 Installing : kmod-libs-27-2.fc33.x86_64 12/169 Installing : hwloc-libs-2.0.4-3.fc32.x86_64 13/169 Installing : perl-macros-4:5.30.2-453.fc33.noarch 14/169 Installing : perl-interpreter-4:5.30.2-453.fc33.x86_64 15/169 Installing : tcl-1:8.6.10-2.fc33.x86_64 16/169 Installing : libmpc-1.1.0-8.fc32.x86_64 17/169 Installing : libevent-2.1.8-8.fc32.x86_64 18/169 Installing : kmod-27-2.fc33.x86_64 19/169 Installing : libaec-devel-1.0.4-3.fc32.x86_64 20/169 Installing : zlib-devel-1.2.11-21.fc32.x86_64 21/169 Installing : scotch-6.0.9-2.fc32.x86_64 22/169 Installing : python-rpm-macros-3.8-8.fc33.noarch 23/169 Installing : procps-ng-3.3.15-7.fc32.x86_64 24/169 Installing : openblas-0.3.9-2.fc33.x86_64 25/169 Installing : openblas-serial-0.3.9-2.fc33.x86_64 26/169 Installing : numactl-libs-2.0.12-4.fc32.x86_64 27/169 Installing : libpsm2-11.2.86-4.fc32.x86_64 28/169 Installing : metis-5.1.0-24.fc32.x86_64 29/169 Installing : libICE-1.0.10-3.fc32.x86_64 30/169 Installing : hwdata-0.335-1.fc33.noarch 31/169 Installing : fonts-filesystem-1:2.0.5-3.fc33.noarch 32/169 Installing : dejavu-sans-fonts-2.37-12.fc33.noarch 33/169 Installing : MUMPS-common-5.3.1-1.fc33.noarch 34/169 Installing : langpacks-core-font-en-3.0-3.fc33.noarch 35/169 Installing : libpciaccess-0.16-2.fc32.x86_64 36/169 Installing : libdrm-2.4.101-1.fc33.x86_64 37/169 Installing : libSM-1.2.3-5.fc32.x86_64 38/169 Installing : ucx-1.6.1-2.fc32.x86_64 39/169 Running scriptlet: ucx-1.6.1-2.fc32.x86_64 39/169 Installing : openblas-threads-0.3.9-2.fc33.x86_64 40/169 Installing : python3-rpm-macros-3.8-8.fc33.noarch 41/169 Installing : cpp-10.1.1-1.fc33.x86_64 42/169 Installing : hdf5-1.10.5-6.fc32.x86_64 43/169 Running scriptlet: xml-common-0.6.3-54.fc32.noarch 44/169 Installing : xml-common-0.6.3-54.fc32.noarch 44/169 Installing : tcsh-6.22.02-3.fc32.x86_64 45/169 Running scriptlet: tcsh-6.22.02-3.fc32.x86_64 45/169 Installing : systemd-rpm-macros-245.5-2.fc33.noarch 46/169 Installing : qrencode-libs-4.0.2-5.fc32.x86_64 47/169 Installing : python-setuptools-wheel-46.4.0-1.fc33.noarch 48/169 Installing : python-pip-wheel-20.1.1-1.fc33.noarch 49/169 Installing : pciutils-libs-3.6.4-1.fc33.x86_64 50/169 Installing : pciutils-3.6.4-1.fc33.x86_64 51/169 Running scriptlet: openssh-8.2p1-3.fc33.x86_64 52/169 Installing : openssh-8.2p1-3.fc33.x86_64 52/169 Installing : nettle-3.6-1.fc33.x86_64 53/169 Installing : gnutls-3.6.13-4.fc33.x86_64 54/169 Installing : munge-libs-0.5.13-7.fc32.x86_64 55/169 Installing : pmix-3.1.5-1.fc33.x86_64 56/169 Installing : mesa-libglapi-20.1.0~rc4-1.fc33.x86_64 57/169 Installing : lua-term-0.07-10.fc32.x86_64 58/169 Installing : lua-posix-33.3.1-16.fc32.x86_64 59/169 Installing : lua-lpeg-1.0.2-2.fc32.x86_64 60/169 Installing : lua-json-1.3.2-14.fc32.noarch 61/169 Installing : lua-filesystem-1.6.3-12.fc32.x86_64 62/169 Installing : lua-5.3.5-7.fc32.x86_64 63/169 Installing : Lmod-8.3.13-1.fc33.x86_64 64/169 Running scriptlet: Lmod-8.3.13-1.fc33.x86_64 64/169 Installing : rpm-mpi-hooks-6-5.fc32.noarch 65/169 Installing : libxshmfence-1.3-6.fc32.x86_64 66/169 Installing : libseccomp-2.4.2-3.fc32.x86_64 67/169 Installing : libpng-2:1.6.37-3.fc32.x86_64 68/169 Installing : freetype-2.10.1-2.fc32.x86_64 69/169 Installing : fontconfig-2.13.92-11.fc33.x86_64 70/169 Running scriptlet: fontconfig-2.13.92-11.fc33.x86_64 70/169 Installing : libpcap-14:1.9.1-3.fc33.x86_64 71/169 Installing : libnfnetlink-1.0.1-17.fc32.x86_64 72/169 Installing : libmnl-1.0.4-11.fc32.x86_64 73/169 Installing : libnetfilter_conntrack-1.0.7-4.fc32.x86_64 74/169 Installing : iptables-libs-1.8.4-7.fc33.x86_64 75/169 Installing : libglvnd-1:1.3.1-2.fc33.x86_64 76/169 Installing : libedit-3.1-32.20191231cvs.fc32.x86_64 77/169 Installing : libcbor-0.5.0-7.fc33.x86_64 78/169 Installing : libargon2-20171227-4.fc32.x86_64 79/169 Installing : libXau-1.0.9-3.fc32.x86_64 80/169 Installing : libxcb-1.13.1-4.fc32.x86_64 81/169 Installing : libX11-xcb-1.6.9-3.fc32.x86_64 82/169 Installing : libX11-common-1.6.9-3.fc32.noarch 83/169 Installing : libX11-1.6.9-3.fc32.x86_64 84/169 Installing : libXext-1.3.4-3.fc32.x86_64 85/169 Installing : libXfixes-5.0.3-11.fc32.x86_64 86/169 Installing : libXdamage-1.1.5-2.fc32.x86_64 87/169 Installing : libXxf86vm-1.1.4-13.fc32.x86_64 88/169 Installing : libglvnd-glx-1:1.3.1-2.fc33.x86_64 89/169 Installing : 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acl-2.2.53-5.fc32.x86_64 126/169 Installing : device-mapper-1.02.171-1.fc33.x86_64 127/169 Installing : device-mapper-libs-1.02.171-1.fc33.x86_64 128/169 Installing : cryptsetup-libs-2.3.2-1.fc33.x86_64 129/169 Installing : dbus-1:1.12.16-5.fc33.x86_64 130/169 Installing : systemd-pam-245.5-2.fc33.x86_64 131/169 Running scriptlet: systemd-245.5-2.fc33.x86_64 132/169 Installing : systemd-245.5-2.fc33.x86_64 132/169 Running scriptlet: systemd-245.5-2.fc33.x86_64 132/169 /var/tmp/rpm-tmp.KehlGO: line 1: 168702 Segmentation fault (core dumped) systemd-machine-id-setup &> /dev/null /var/tmp/rpm-tmp.KehlGO: line 21: 168705 Segmentation fault (core dumped) systemctl daemon-reexec &> /dev/null /var/tmp/rpm-tmp.KehlGO: line 23: 168713 Segmentation fault (core dumped) journalctl --update-catalog &> /dev/null /var/tmp/rpm-tmp.KehlGO: line 24: 168720 Segmentation fault (core dumped) systemd-tmpfiles --create &> /dev/null /var/tmp/rpm-tmp.KehlGO: line 50: 168734 Segmentation fault (core dumped) systemctl preset-all &> /dev/null /var/tmp/rpm-tmp.KehlGO: line 50: 168741 Segmentation fault (core dumped) systemctl --global preset-all &> /dev/null Installing : dbus-common-1:1.12.16-5.fc33.noarch 133/169 Running scriptlet: dbus-common-1:1.12.16-5.fc33.noarch 133/169 /var/tmp/rpm-tmp.bMboaP: line 6: 168753 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset dbus.socket /var/tmp/rpm-tmp.bMboaP: line 13: 168756 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset \--global dbus.socket Running scriptlet: dbus-broker-23-2.fc33.x86_64 134/169 Installing : dbus-broker-23-2.fc33.x86_64 134/169 Running scriptlet: dbus-broker-23-2.fc33.x86_64 134/169 /var/tmp/rpm-tmp.lCdDyP: line 6: 168785 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset dbus-broker.service /var/tmp/rpm-tmp.lCdDyP: line 13: 168788 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset \--global dbus-broker.service Running scriptlet: systemd-udev-245.5-2.fc33.x86_64 135/169 Installing : systemd-udev-245.5-2.fc33.x86_64 135/169 Running scriptlet: systemd-udev-245.5-2.fc33.x86_64 135/169 /var/tmp/rpm-tmp.6DkEaP: line 13: 168818 Segmentation fault (core dumped) udevadm hwdb --update &> /dev/null /var/tmp/rpm-tmp.6DkEaP: line 19: 168821 Segmentation fault (core dumped) /usr/bin/systemctl --no-reload preset systemd-udev{d,-settle,-trigger}.service systemd-udevd-{control,kernel}.socket systemd-timesyncd.service /var/tmp/rpm-tmp.6DkEaP: line 21: 168828 Segmentation fault (core dumped) /usr/lib/systemd/systemd-random-seed save 2>&1 Installing : infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_6 136/169 Installing : libfido2-1.4.0-1.fc33.x86_64 137/169 Installing : openssh-clients-8.2p1-3.fc33.x86_64 138/169 Installing : libkcapi-1.2.0-1.fc33.x86_64 139/169 Installing : libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 140/169 Installing : dracut-050-26.git20200316.fc33.x86_64 141/169 Installing : rdma-core-29.0-1.fc33.x86_64 142/169 Running scriptlet: rdma-core-29.0-1.fc33.x86_64 142/169 /var/tmp/rpm-tmp.GODkAP: line 1: 168841 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=infiniband --action=change /var/tmp/rpm-tmp.GODkAP: line 2: 168844 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=net --action=change /var/tmp/rpm-tmp.GODkAP: line 3: 168851 Segmentation fault (core dumped) /sbin/udevadm trigger --subsystem-match=infiniband_mad --action=change Installing : libibverbs-29.0-1.fc33.x86_64 143/169 Installing : librdmacm-29.0-1.fc33.x86_64 144/169 Installing : libfabric-1.10.1-1.fc33.x86_64 145/169 Installing : orangefs-2.9.7-8.fc33.x86_64 146/169 Installing : libibumad-29.0-1.fc33.x86_64 147/169 Installing : opensm-libs-3.3.23-1.fc33.x86_64 148/169 Installing : openmpi-4.0.4-0.2.rc1.fc33.x86_64 149/169 Installing : ptscotch-openmpi-6.0.9-2.fc32.x86_64 150/169 Installing : openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 151/169 Installing : superlu_dist-openmpi-1:6.1.1-3.fc33.x86_64 152/169 Installing : hdf5-openmpi-1.10.5-6.fc32.x86_64 153/169 Installing : scalapack-openmpi-2.1.0-2.fc32.x86_64 154/169 Installing : MUMPS-openmpi-5.3.1-1.fc33.x86_64 155/169 Installing : hypre-openmpi-2.18.1-2.fc33.x86_64 156/169 Installing : petsc-openmpi-3.13.1-2.fc33.x86_64 157/169 Installing : petsc-openmpi-devel-3.13.1-2.fc33.x86_64 158/169 Installing : scalapack-openmpi-devel-2.1.0-2.fc32.x86_64 159/169 Installing : hdf5-openmpi-devel-1.10.5-6.fc32.x86_64 160/169 Installing : ptscotch-openmpi-devel-6.0.9-2.fc32.x86_64 161/169 Installing : petsc-mpich-devel-3.13.1-2.fc33.x86_64 162/169 Installing : scalapack-mpich-devel-2.1.0-2.fc32.x86_64 163/169 Installing : python3-devel-3.8.3-1.fc33.x86_64 164/169 Installing : hdf5-mpich-devel-1.10.5-6.fc32.x86_64 165/169 Installing : ptscotch-mpich-devel-6.0.9-2.fc32.x86_64 166/169 Installing : python3-Cython-3.0~a3-2.fc33.x86_64 167/169 Installing : python3-numpy-1:1.18.4-2.fc33.x86_64 168/169 Installing : annobin-9.21-1.fc33.x86_64 169/169 Running scriptlet: fontconfig-2.13.92-11.fc33.x86_64 169/169 Running scriptlet: annobin-9.21-1.fc33.x86_64 169/169 Verifying : libibumad-29.0-1.fc33.x86_64 1/169 Verifying : libibverbs-29.0-1.fc33.x86_64 2/169 Verifying : librdmacm-29.0-1.fc33.x86_64 3/169 Verifying : python3-Cython-3.0~a3-2.fc33.x86_64 4/169 Verifying : rdma-core-29.0-1.fc33.x86_64 5/169 Verifying : Lmod-8.3.13-1.fc33.x86_64 6/169 Verifying : MUMPS-common-5.3.1-1.fc33.noarch 7/169 Verifying : MUMPS-mpich-5.3.1-1.fc33.x86_64 8/169 Verifying : MUMPS-openmpi-5.3.1-1.fc33.x86_64 9/169 Verifying : acl-2.2.53-5.fc32.x86_64 10/169 Verifying : annobin-9.21-1.fc33.x86_64 11/169 Verifying : cgnslib-4.1.1-1.fc33.x86_64 12/169 Verifying : cmake-filesystem-3.17.2-1.fc33.x86_64 13/169 Verifying : cpp-10.1.1-1.fc33.x86_64 14/169 Verifying : cryptsetup-libs-2.3.2-1.fc33.x86_64 15/169 Verifying : dbus-1:1.12.16-5.fc33.x86_64 16/169 Verifying : dbus-broker-23-2.fc33.x86_64 17/169 Verifying : dbus-common-1:1.12.16-5.fc33.noarch 18/169 Verifying : dejavu-sans-fonts-2.37-12.fc33.noarch 19/169 Verifying : device-mapper-1.02.171-1.fc33.x86_64 20/169 Verifying : device-mapper-libs-1.02.171-1.fc33.x86_64 21/169 Verifying : dracut-050-26.git20200316.fc33.x86_64 22/169 Verifying : fontconfig-2.13.92-11.fc33.x86_64 23/169 Verifying : fonts-filesystem-1:2.0.5-3.fc33.noarch 24/169 Verifying : freetype-2.10.1-2.fc32.x86_64 25/169 Verifying : gcc-10.1.1-1.fc33.x86_64 26/169 Verifying : gcc-gfortran-10.1.1-1.fc33.x86_64 27/169 Verifying : gdbm-libs-1:1.18.1-3.fc32.x86_64 28/169 Verifying : glibc-devel-2.31.9000-13.fc33.x86_64 29/169 Verifying : glibc-headers-x86-2.31.9000-13.fc33.noarch 30/169 Verifying : gnutls-3.6.13-4.fc33.x86_64 31/169 Verifying : hdf5-1.10.5-6.fc32.x86_64 32/169 Verifying : hdf5-mpich-1.10.5-6.fc32.x86_64 33/169 Verifying : hdf5-mpich-devel-1.10.5-6.fc32.x86_64 34/169 Verifying : hdf5-openmpi-1.10.5-6.fc32.x86_64 35/169 Verifying : hdf5-openmpi-devel-1.10.5-6.fc32.x86_64 36/169 Verifying : hwdata-0.335-1.fc33.noarch 37/169 Verifying : hwloc-libs-2.0.4-3.fc32.x86_64 38/169 Verifying : hypre-mpich-2.18.1-2.fc33.x86_64 39/169 Verifying : hypre-openmpi-2.18.1-2.fc33.x86_64 40/169 Verifying : infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_6 41/169 Verifying : iptables-libs-1.8.4-7.fc33.x86_64 42/169 Verifying : isl-0.16.1-10.fc32.x86_64 43/169 Verifying : json-c-0.14-5.fc33.x86_64 44/169 Verifying : kbd-2.2.0-3.fc33.x86_64 45/169 Verifying : kbd-legacy-2.2.0-3.fc33.noarch 46/169 Verifying : kbd-misc-2.2.0-3.fc33.noarch 47/169 Verifying : kernel-headers-5.7.0-0.rc7.git0.1.fc33.x86_64 48/169 Verifying : kmod-27-2.fc33.x86_64 49/169 Verifying : kmod-libs-27-2.fc33.x86_64 50/169 Verifying : langpacks-core-font-en-3.0-3.fc33.noarch 51/169 Verifying : libICE-1.0.10-3.fc32.x86_64 52/169 Verifying : libSM-1.2.3-5.fc32.x86_64 53/169 Verifying : libX11-1.6.9-3.fc32.x86_64 54/169 Verifying : libX11-common-1.6.9-3.fc32.noarch 55/169 Verifying : libX11-xcb-1.6.9-3.fc32.x86_64 56/169 Verifying : libXau-1.0.9-3.fc32.x86_64 57/169 Verifying : libXdamage-1.1.5-2.fc32.x86_64 58/169 Verifying : libXext-1.3.4-3.fc32.x86_64 59/169 Verifying : libXfixes-5.0.3-11.fc32.x86_64 60/169 Verifying : libXft-2.3.3-3.fc32.x86_64 61/169 Verifying : libXmu-1.1.3-3.fc32.x86_64 62/169 Verifying : libXrender-0.9.10-11.fc32.x86_64 63/169 Verifying : libXt-1.2.0-1.fc32.x86_64 64/169 Verifying : libXxf86vm-1.1.4-13.fc32.x86_64 65/169 Verifying : libaec-1.0.4-3.fc32.x86_64 66/169 Verifying : libaec-devel-1.0.4-3.fc32.x86_64 67/169 Verifying : libargon2-20171227-4.fc32.x86_64 68/169 Verifying : libcbor-0.5.0-7.fc33.x86_64 69/169 Verifying : libdrm-2.4.101-1.fc33.x86_64 70/169 Verifying : libedit-3.1-32.20191231cvs.fc32.x86_64 71/169 Verifying : libevent-2.1.8-8.fc32.x86_64 72/169 Verifying : libfabric-1.10.1-1.fc33.x86_64 73/169 Verifying : libfido2-1.4.0-1.fc33.x86_64 74/169 Verifying : libgfortran-10.1.1-1.fc33.x86_64 75/169 Verifying : libglvnd-1:1.3.1-2.fc33.x86_64 76/169 Verifying : libglvnd-glx-1:1.3.1-2.fc33.x86_64 77/169 Verifying : libkcapi-1.2.0-1.fc33.x86_64 78/169 Verifying : libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 79/169 Verifying : libmnl-1.0.4-11.fc32.x86_64 80/169 Verifying : libmpc-1.1.0-8.fc32.x86_64 81/169 Verifying : libnetfilter_conntrack-1.0.7-4.fc32.x86_64 82/169 Verifying : libnfnetlink-1.0.1-17.fc32.x86_64 83/169 Verifying : libnl3-3.5.0-2.fc32.x86_64 84/169 Verifying : libpcap-14:1.9.1-3.fc33.x86_64 85/169 Verifying : libpciaccess-0.16-2.fc32.x86_64 86/169 Verifying : libpng-2:1.6.37-3.fc32.x86_64 87/169 Verifying : libpsm2-11.2.86-4.fc32.x86_64 88/169 Verifying : libquadmath-10.1.1-1.fc33.x86_64 89/169 Verifying : libquadmath-devel-10.1.1-1.fc33.x86_64 90/169 Verifying : libseccomp-2.4.2-3.fc32.x86_64 91/169 Verifying : libxcb-1.13.1-4.fc32.x86_64 92/169 Verifying : libxcrypt-devel-4.4.16-3.fc33.x86_64 93/169 Verifying : libxshmfence-1.3-6.fc32.x86_64 94/169 Verifying : lua-5.3.5-7.fc32.x86_64 95/169 Verifying : lua-filesystem-1.6.3-12.fc32.x86_64 96/169 Verifying : lua-json-1.3.2-14.fc32.noarch 97/169 Verifying : lua-lpeg-1.0.2-2.fc32.x86_64 98/169 Verifying : lua-posix-33.3.1-16.fc32.x86_64 99/169 Verifying : lua-term-0.07-10.fc32.x86_64 100/169 Verifying : mesa-libGL-20.1.0~rc4-1.fc33.x86_64 101/169 Verifying : mesa-libGLU-9.0.1-2.fc32.x86_64 102/169 Verifying : mesa-libglapi-20.1.0~rc4-1.fc33.x86_64 103/169 Verifying : metis-5.1.0-24.fc32.x86_64 104/169 Verifying : mpich-3.3.2-4.fc33.x86_64 105/169 Verifying : mpich-devel-3.3.2-4.fc33.x86_64 106/169 Verifying : munge-libs-0.5.13-7.fc32.x86_64 107/169 Verifying : nettle-3.6-1.fc33.x86_64 108/169 Verifying : numactl-libs-2.0.12-4.fc32.x86_64 109/169 Verifying : openblas-0.3.9-2.fc33.x86_64 110/169 Verifying : openblas-serial-0.3.9-2.fc33.x86_64 111/169 Verifying : openblas-threads-0.3.9-2.fc33.x86_64 112/169 Verifying : openmpi-4.0.4-0.2.rc1.fc33.x86_64 113/169 Verifying : openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 114/169 Verifying : opensm-libs-3.3.23-1.fc33.x86_64 115/169 Verifying : openssh-8.2p1-3.fc33.x86_64 116/169 Verifying : openssh-clients-8.2p1-3.fc33.x86_64 117/169 Verifying : orangefs-2.9.7-8.fc33.x86_64 118/169 Verifying : pciutils-3.6.4-1.fc33.x86_64 119/169 Verifying : pciutils-libs-3.6.4-1.fc33.x86_64 120/169 Verifying : perl-Carp-1.50-440.fc32.noarch 121/169 Verifying : perl-Errno-1.30-453.fc33.x86_64 122/169 Verifying : perl-Exporter-5.74-2.fc32.noarch 123/169 Verifying : perl-PathTools-3.78-441.fc32.x86_64 124/169 Verifying : perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 125/169 Verifying : perl-constant-1.33-441.fc32.noarch 126/169 Verifying : perl-interpreter-4:5.30.2-453.fc33.x86_64 127/169 Verifying : perl-libs-4:5.30.2-453.fc33.x86_64 128/169 Verifying : perl-macros-4:5.30.2-453.fc33.noarch 129/169 Verifying : petsc-mpich-3.13.1-2.fc33.x86_64 130/169 Verifying : petsc-mpich-devel-3.13.1-2.fc33.x86_64 131/169 Verifying : petsc-openmpi-3.13.1-2.fc33.x86_64 132/169 Verifying : petsc-openmpi-devel-3.13.1-2.fc33.x86_64 133/169 Verifying : pmix-3.1.5-1.fc33.x86_64 134/169 Verifying : procps-ng-3.3.15-7.fc32.x86_64 135/169 Verifying : ptscotch-mpich-6.0.9-2.fc32.x86_64 136/169 Verifying : ptscotch-mpich-devel-6.0.9-2.fc32.x86_64 137/169 Verifying : ptscotch-openmpi-6.0.9-2.fc32.x86_64 138/169 Verifying : ptscotch-openmpi-devel-6.0.9-2.fc32.x86_64 139/169 Verifying : python-pip-wheel-20.1.1-1.fc33.noarch 140/169 Verifying : python-rpm-macros-3.8-8.fc33.noarch 141/169 Verifying : python-setuptools-wheel-46.4.0-1.fc33.noarch 142/169 Verifying : python3-3.8.3-1.fc33.x86_64 143/169 Verifying : python3-devel-3.8.3-1.fc33.x86_64 144/169 Verifying : python3-libs-3.8.3-1.fc33.x86_64 145/169 Verifying : python3-numpy-1:1.18.4-2.fc33.x86_64 146/169 Verifying : python3-rpm-generators-11-6.fc33.noarch 147/169 Verifying : python3-rpm-macros-3.8-8.fc33.noarch 148/169 Verifying : python3-setuptools-46.4.0-1.fc33.noarch 149/169 Verifying : qrencode-libs-4.0.2-5.fc32.x86_64 150/169 Verifying : rpm-mpi-hooks-6-5.fc32.noarch 151/169 Verifying : scalapack-common-2.1.0-2.fc32.x86_64 152/169 Verifying : scalapack-mpich-2.1.0-2.fc32.x86_64 153/169 Verifying : scalapack-mpich-devel-2.1.0-2.fc32.x86_64 154/169 Verifying : scalapack-openmpi-2.1.0-2.fc32.x86_64 155/169 Verifying : scalapack-openmpi-devel-2.1.0-2.fc32.x86_64 156/169 Verifying : scotch-6.0.9-2.fc32.x86_64 157/169 Verifying : superlu_dist-mpich-1:6.1.1-3.fc33.x86_64 158/169 Verifying : superlu_dist-openmpi-1:6.1.1-3.fc33.x86_64 159/169 Verifying : systemd-245.5-2.fc33.x86_64 160/169 Verifying : systemd-pam-245.5-2.fc33.x86_64 161/169 Verifying : systemd-rpm-macros-245.5-2.fc33.noarch 162/169 Verifying : systemd-udev-245.5-2.fc33.x86_64 163/169 Verifying : tcl-1:8.6.10-2.fc33.x86_64 164/169 Verifying : tcsh-6.22.02-3.fc32.x86_64 165/169 Verifying : tk-1:8.6.10-3.fc32.x86_64 166/169 Verifying : ucx-1.6.1-2.fc32.x86_64 167/169 Verifying : xml-common-0.6.3-54.fc32.noarch 168/169 Verifying : zlib-devel-1.2.11-21.fc32.x86_64 169/169 Installed: Lmod-8.3.13-1.fc33.x86_64 MUMPS-common-5.3.1-1.fc33.noarch MUMPS-mpich-5.3.1-1.fc33.x86_64 MUMPS-openmpi-5.3.1-1.fc33.x86_64 acl-2.2.53-5.fc32.x86_64 annobin-9.21-1.fc33.x86_64 cgnslib-4.1.1-1.fc33.x86_64 cmake-filesystem-3.17.2-1.fc33.x86_64 cpp-10.1.1-1.fc33.x86_64 cryptsetup-libs-2.3.2-1.fc33.x86_64 dbus-1:1.12.16-5.fc33.x86_64 dbus-broker-23-2.fc33.x86_64 dbus-common-1:1.12.16-5.fc33.noarch dejavu-sans-fonts-2.37-12.fc33.noarch device-mapper-1.02.171-1.fc33.x86_64 device-mapper-libs-1.02.171-1.fc33.x86_64 dracut-050-26.git20200316.fc33.x86_64 fontconfig-2.13.92-11.fc33.x86_64 fonts-filesystem-1:2.0.5-3.fc33.noarch freetype-2.10.1-2.fc32.x86_64 gcc-10.1.1-1.fc33.x86_64 gcc-gfortran-10.1.1-1.fc33.x86_64 gdbm-libs-1:1.18.1-3.fc32.x86_64 glibc-devel-2.31.9000-13.fc33.x86_64 glibc-headers-x86-2.31.9000-13.fc33.noarch gnutls-3.6.13-4.fc33.x86_64 hdf5-1.10.5-6.fc32.x86_64 hdf5-mpich-1.10.5-6.fc32.x86_64 hdf5-mpich-devel-1.10.5-6.fc32.x86_64 hdf5-openmpi-1.10.5-6.fc32.x86_64 hdf5-openmpi-devel-1.10.5-6.fc32.x86_64 hwdata-0.335-1.fc33.noarch hwloc-libs-2.0.4-3.fc32.x86_64 hypre-mpich-2.18.1-2.fc33.x86_64 hypre-openmpi-2.18.1-2.fc33.x86_64 infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_64 iptables-libs-1.8.4-7.fc33.x86_64 isl-0.16.1-10.fc32.x86_64 json-c-0.14-5.fc33.x86_64 kbd-2.2.0-3.fc33.x86_64 kbd-legacy-2.2.0-3.fc33.noarch kbd-misc-2.2.0-3.fc33.noarch kernel-headers-5.7.0-0.rc7.git0.1.fc33.x86_64 kmod-27-2.fc33.x86_64 kmod-libs-27-2.fc33.x86_64 langpacks-core-font-en-3.0-3.fc33.noarch libICE-1.0.10-3.fc32.x86_64 libSM-1.2.3-5.fc32.x86_64 libX11-1.6.9-3.fc32.x86_64 libX11-common-1.6.9-3.fc32.noarch libX11-xcb-1.6.9-3.fc32.x86_64 libXau-1.0.9-3.fc32.x86_64 libXdamage-1.1.5-2.fc32.x86_64 libXext-1.3.4-3.fc32.x86_64 libXfixes-5.0.3-11.fc32.x86_64 libXft-2.3.3-3.fc32.x86_64 libXmu-1.1.3-3.fc32.x86_64 libXrender-0.9.10-11.fc32.x86_64 libXt-1.2.0-1.fc32.x86_64 libXxf86vm-1.1.4-13.fc32.x86_64 libaec-1.0.4-3.fc32.x86_64 libaec-devel-1.0.4-3.fc32.x86_64 libargon2-20171227-4.fc32.x86_64 libcbor-0.5.0-7.fc33.x86_64 libdrm-2.4.101-1.fc33.x86_64 libedit-3.1-32.20191231cvs.fc32.x86_64 libevent-2.1.8-8.fc32.x86_64 libfabric-1.10.1-1.fc33.x86_64 libfido2-1.4.0-1.fc33.x86_64 libgfortran-10.1.1-1.fc33.x86_64 libglvnd-1:1.3.1-2.fc33.x86_64 libglvnd-glx-1:1.3.1-2.fc33.x86_64 libibumad-29.0-1.fc33.x86_64 libibverbs-29.0-1.fc33.x86_64 libkcapi-1.2.0-1.fc33.x86_64 libkcapi-hmaccalc-1.2.0-1.fc33.x86_64 libmnl-1.0.4-11.fc32.x86_64 libmpc-1.1.0-8.fc32.x86_64 libnetfilter_conntrack-1.0.7-4.fc32.x86_64 libnfnetlink-1.0.1-17.fc32.x86_64 libnl3-3.5.0-2.fc32.x86_64 libpcap-14:1.9.1-3.fc33.x86_64 libpciaccess-0.16-2.fc32.x86_64 libpng-2:1.6.37-3.fc32.x86_64 libpsm2-11.2.86-4.fc32.x86_64 libquadmath-10.1.1-1.fc33.x86_64 libquadmath-devel-10.1.1-1.fc33.x86_64 librdmacm-29.0-1.fc33.x86_64 libseccomp-2.4.2-3.fc32.x86_64 libxcb-1.13.1-4.fc32.x86_64 libxcrypt-devel-4.4.16-3.fc33.x86_64 libxshmfence-1.3-6.fc32.x86_64 lua-5.3.5-7.fc32.x86_64 lua-filesystem-1.6.3-12.fc32.x86_64 lua-json-1.3.2-14.fc32.noarch lua-lpeg-1.0.2-2.fc32.x86_64 lua-posix-33.3.1-16.fc32.x86_64 lua-term-0.07-10.fc32.x86_64 mesa-libGL-20.1.0~rc4-1.fc33.x86_64 mesa-libGLU-9.0.1-2.fc32.x86_64 mesa-libglapi-20.1.0~rc4-1.fc33.x86_64 metis-5.1.0-24.fc32.x86_64 mpich-3.3.2-4.fc33.x86_64 mpich-devel-3.3.2-4.fc33.x86_64 munge-libs-0.5.13-7.fc32.x86_64 nettle-3.6-1.fc33.x86_64 numactl-libs-2.0.12-4.fc32.x86_64 openblas-0.3.9-2.fc33.x86_64 openblas-serial-0.3.9-2.fc33.x86_64 openblas-threads-0.3.9-2.fc33.x86_64 openmpi-4.0.4-0.2.rc1.fc33.x86_64 openmpi-devel-4.0.4-0.2.rc1.fc33.x86_64 opensm-libs-3.3.23-1.fc33.x86_64 openssh-8.2p1-3.fc33.x86_64 openssh-clients-8.2p1-3.fc33.x86_64 orangefs-2.9.7-8.fc33.x86_64 pciutils-3.6.4-1.fc33.x86_64 pciutils-libs-3.6.4-1.fc33.x86_64 perl-Carp-1.50-440.fc32.noarch perl-Errno-1.30-453.fc33.x86_64 perl-Exporter-5.74-2.fc32.noarch perl-PathTools-3.78-441.fc32.x86_64 perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 perl-constant-1.33-441.fc32.noarch perl-interpreter-4:5.30.2-453.fc33.x86_64 perl-libs-4:5.30.2-453.fc33.x86_64 perl-macros-4:5.30.2-453.fc33.noarch petsc-mpich-3.13.1-2.fc33.x86_64 petsc-mpich-devel-3.13.1-2.fc33.x86_64 petsc-openmpi-3.13.1-2.fc33.x86_64 petsc-openmpi-devel-3.13.1-2.fc33.x86_64 pmix-3.1.5-1.fc33.x86_64 procps-ng-3.3.15-7.fc32.x86_64 ptscotch-mpich-6.0.9-2.fc32.x86_64 ptscotch-mpich-devel-6.0.9-2.fc32.x86_64 ptscotch-openmpi-6.0.9-2.fc32.x86_64 ptscotch-openmpi-devel-6.0.9-2.fc32.x86_64 python-pip-wheel-20.1.1-1.fc33.noarch python-rpm-macros-3.8-8.fc33.noarch python-setuptools-wheel-46.4.0-1.fc33.noarch python3-3.8.3-1.fc33.x86_64 python3-Cython-3.0~a3-2.fc33.x86_64 python3-devel-3.8.3-1.fc33.x86_64 python3-libs-3.8.3-1.fc33.x86_64 python3-numpy-1:1.18.4-2.fc33.x86_64 python3-rpm-generators-11-6.fc33.noarch python3-rpm-macros-3.8-8.fc33.noarch python3-setuptools-46.4.0-1.fc33.noarch qrencode-libs-4.0.2-5.fc32.x86_64 rdma-core-29.0-1.fc33.x86_64 rpm-mpi-hooks-6-5.fc32.noarch scalapack-common-2.1.0-2.fc32.x86_64 scalapack-mpich-2.1.0-2.fc32.x86_64 scalapack-mpich-devel-2.1.0-2.fc32.x86_64 scalapack-openmpi-2.1.0-2.fc32.x86_64 scalapack-openmpi-devel-2.1.0-2.fc32.x86_64 scotch-6.0.9-2.fc32.x86_64 superlu_dist-mpich-1:6.1.1-3.fc33.x86_64 superlu_dist-openmpi-1:6.1.1-3.fc33.x86_64 systemd-245.5-2.fc33.x86_64 systemd-pam-245.5-2.fc33.x86_64 systemd-rpm-macros-245.5-2.fc33.noarch systemd-udev-245.5-2.fc33.x86_64 tcl-1:8.6.10-2.fc33.x86_64 tcsh-6.22.02-3.fc32.x86_64 tk-1:8.6.10-3.fc32.x86_64 ucx-1.6.1-2.fc32.x86_64 xml-common-0.6.3-54.fc32.noarch zlib-devel-1.2.11-21.fc32.x86_64 Complete! Finish: build setup for petsc4py-3.13.0-2.fc33.src.rpm Start: rpmbuild petsc4py-3.13.0-2.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1590451200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.JM8uVw + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf petsc4py-3.13.0 + /usr/bin/mkdir -p petsc4py-3.13.0 + cd petsc4py-3.13.0 + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/petsc4py-3.13.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf petsc4py-3.13.0/petsc4py.egg-info + cp -a petsc4py-3.13.0 petsc4py-mpich + mv petsc4py-3.13.0 petsc4py-openmpi + pushd petsc4py-openmpi ~/build/BUILD/petsc4py-3.13.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.13.0 Patch #0 (petsc4py-openmpi_set_dir.patch): + echo 'Patch #0 (petsc4py-openmpi_set_dir.patch):' + /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0 patching file conf/baseconf.py Hunk #1 succeeded at 127 (offset 3 lines). Hunk #2 succeeded at 140 (offset 3 lines). + sed -e 's|@@arch@@|x86_64|g' -i conf/baseconf.py + sed -e 's|@@bits@@|64|g' -i conf/baseconf.py + sed -e 's|-@@petscver@@||g' -i conf/baseconf.py + popd ~/build/BUILD/petsc4py-3.13.0 ~/build/BUILD/petsc4py-3.13.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.13.0 + pushd petsc4py-mpich + echo 'Patch #1 (petsc4py-mpich_set_dir.patch):' + /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0 Patch #1 (petsc4py-mpich_set_dir.patch): patching file conf/baseconf.py Hunk #1 succeeded at 127 (offset 3 lines). Hunk #2 succeeded at 140 (offset 3 lines). + sed -e 's|@@arch@@|x86_64|g' -i conf/baseconf.py + sed -e 's|@@bits@@|64|g' -i conf/baseconf.py + sed -e 's|-@@petscver@@||g' -i conf/baseconf.py + popd ~/build/BUILD/petsc4py-3.13.0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.jA6ORt + umask 022 ~/build/BUILD/petsc4py-3.13.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.13.0 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + pushd petsc4py-openmpi + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 69 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + export PETSC_DIR=/usr + PETSC_DIR=/usr + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_src running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-3.8/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-3.8/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-3.8/petsc4py creating build/lib.linux-x86_64-3.8/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-3.8/petsc4py/lib creating build/lib.linux-x86_64-3.8/petsc4py/include creating build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-3.8/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-3.8/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.13.1 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/src mpicc -pthread -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/include/openmpi-x86_64/superlu_dist -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c src/PETSc.c -o build/temp.linux-x86_64-3.8/src/PETSc.o In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function ‘__pyx_pymod_exec_PETSc’: src/petsc4py.PETSc.c:315515:30: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 315515 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_PETSc(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/include/openmpi-x86_64/superlu_dist -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c src/libpetsc4py.c -o build/temp.linux-x86_64-3.8/src/libpetsc4py.o mpicc -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -fPIC -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -shared -g -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld build/temp.linux-x86_64-3.8/src/PETSc.o build/temp.linux-x86_64-3.8/src/libpetsc4py.o -L/usr/lib64/openmpi/lib -Wl,--enable-new-dtags,-R/usr/lib64/openmpi/lib -lpetsc -o build/lib.linux-x86_64-3.8/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so writing build/lib.linux-x86_64-3.8/petsc4py/lib/petsc.cfg + popd ~/build/BUILD/petsc4py-3.13.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 69 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ~/build/BUILD/petsc4py-3.13.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.13.0 ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXt9LG1wYXRoQT17Ii9ldGMvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwiL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eCIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsIi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hh ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + pushd petsc4py-mpich + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 69 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export PETSC_DIR=/usr + PETSC_DIR=/usr + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_src running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-3.8/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-3.8/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-3.8/petsc4py creating build/lib.linux-x86_64-3.8/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-3.8/petsc4py/lib creating build/lib.linux-x86_64-3.8/petsc4py/include creating build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-3.8/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-3.8/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.13.1 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/src mpicc -pthread -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/include/mpich-x86_64/superlu_dist -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c src/PETSc.c -o build/temp.linux-x86_64-3.8/src/PETSc.o In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function ‘__pyx_pymod_exec_PETSc’: src/petsc4py.PETSc.c:315515:30: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 315515 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_PETSc(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/include/mpich-x86_64/superlu_dist -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.8/site-packages/numpy/core/include -I/usr/include/python3.8 -c src/libpetsc4py.c -o build/temp.linux-x86_64-3.8/src/libpetsc4py.o mpicc -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -fPIC -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O3 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -shared -g -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld build/temp.linux-x86_64-3.8/src/PETSc.o build/temp.linux-x86_64-3.8/src/libpetsc4py.o -L/usr/lib64/mpich/lib -Wl,--enable-new-dtags,-R/usr/lib64/mpich/lib -lpetsc -o build/lib.linux-x86_64-3.8/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so writing build/lib.linux-x86_64-3.8/petsc4py/lib/petsc.cfg + popd ~/build/BUILD/petsc4py-3.13.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 69 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.7OFjnx + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 ++ dirname /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 + cd petsc4py-3.13.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 431 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ~/build/BUILD/petsc4py-3.13.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.13.0 ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + pushd petsc4py-openmpi + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 running install PETSC_DIR not specified running install_lib creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8 creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/PETSc.py to PETSc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/__main__.py to __main__.cpython-38.pyc writing byte-compilation script '/tmp/tmp2iiui3d2.py' /usr/bin/python3 /tmp/tmp2iiui3d2.py removing /tmp/tmp2iiui3d2.py running install_egg_info running egg_info creating petsc4py.egg-info writing petsc4py.egg-info/PKG-INFO writing dependency_links to petsc4py.egg-info/dependency_links.txt writing requirements to petsc4py.egg-info/requires.txt writing top-level names to petsc4py.egg-info/top_level.txt writing manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi + cp -a /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/include/openmpi-x86_64/petsc4py + cp -a src/include/arraynpy.pxi src/include/compat src/include/compat.h src/include/custom.h src/include/cython.h src/include/initpkg.h src/include/pep3118.h src/include/petsc4py src/include/scalar.h /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/include/openmpi-x86_64/petsc4py/ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 431 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ~/build/BUILD/petsc4py-3.13.0 ~/build/BUILD/petsc4py-3.13.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.13.0 ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + popd + pushd petsc4py-mpich + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 431 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 running install PETSC_DIR not specified running install_lib creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/include/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.8/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py copying build/lib.linux-x86_64-3.8/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/lib/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/PETSc.py to PETSc.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py/__main__.py to __main__.cpython-38.pyc writing byte-compilation script '/tmp/tmpxjejup8k.py' /usr/bin/python3 /tmp/tmpxjejup8k.py removing /tmp/tmpxjejup8k.py running install_egg_info running egg_info creating petsc4py.egg-info writing petsc4py.egg-info/PKG-INFO writing dependency_links to petsc4py.egg-info/dependency_links.txt writing requirements to petsc4py.egg-info/requires.txt writing top-level names to petsc4py.egg-info/top_level.txt writing manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich + cp -a /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/petsc4py-3.13.0-py3.8.egg-info + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/include/mpich-x86_64/petsc4py + cp -a src/include/arraynpy.pxi src/include/compat src/include/compat.h src/include/custom.h src/include/cython.h src/include/initpkg.h src/include/pep3118.h src/include/petsc4py src/include/scalar.h /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/include/mpich-x86_64/petsc4py/ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 431 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ~/build/BUILD/petsc4py-3.13.0 ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + popd + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 3.13.0-2.fc33 --unique-debug-suffix -3.13.0-2.fc33.x86_64 --unique-debug-src-base petsc4py-3.13.0-2.fc33.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/petsc4py-3.13.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/petsc4py/lib/PETSc.cpython-38-x86_64-linux-gnu.so original debug info size: 49028kB, size after compression: 48016kB /usr/lib/rpm/sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. 59825 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib/debug/usr/lib64/python3.8 using /usr/bin/python3.8 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8 using /usr/bin/python3.8 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.niJRiu + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/petsc4py-3.13.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.13.0 + cd petsc4py-3.13.0 + pushd petsc4py-openmpi + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 763 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + /usr/bin/python3 setup.py test running test [0@a58e35c87a7a4cd9983af01cc3de6c46] Python 3.8 (/usr/bin/python3) [0@a58e35c87a7a4cd9983af01cc3de6c46] PETSc 3.13.1 release (conf: '') [0@a58e35c87a7a4cd9983af01cc3de6c46] petsc4py 3.13.0 (build/lib.linux-x86_64-3.8/petsc4py) 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---------------------------------------------------------------------- Ran 5967 tests in 72.877s OK + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 763 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ~/build/BUILD/petsc4py-3.13.0 ~/build/BUILD/petsc4py-3.13.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.13.0 ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + popd + pushd petsc4py-mpich + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 763 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich + PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich + /usr/bin/python3 setup.py test running test [0@a58e35c87a7a4cd9983af01cc3de6c46] Python 3.8 (/usr/bin/python3) [0@a58e35c87a7a4cd9983af01cc3de6c46] PETSc 3.13.1 release (conf: '') [0@a58e35c87a7a4cd9983af01cc3de6c46] petsc4py 3.13.0 (build/lib.linux-x86_64-3.8/petsc4py) 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---------------------------------------------------------------------- Ran 5967 tests in 71.939s OK + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 763 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ~/build/BUILD/petsc4py-3.13.0 ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + popd + RPM_EC=0 ++ jobs -p Processing files: petsc4py-openmpi-devel-3.13.0-2.fc33.x86_64 + exit 0 Provides: petsc4py-openmpi-devel = 3.13.0-2.fc33 petsc4py-openmpi-devel(x86-64) = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-petsc4py-openmpi-3.13.0-2.fc33.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.oGo5Xu + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-openmpi + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-openmpi + cp -pr petsc4py-openmpi/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-openmpi + cp -pr petsc4py-openmpi/README.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.iqmTju + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-openmpi + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-openmpi + cp -pr petsc4py-openmpi/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-petsc4py-openmpi = 3.13.0-2.fc33 python3-petsc4py-openmpi = 3.13.0-2.fc33 python3-petsc4py-openmpi(x86-64) = 3.13.0-2.fc33 python3.8-petsc4py-openmpi = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libpetsc.so.3.13()(64bit)(openmpi-x86_64) python(abi) = 3.8 rtld(GNU_HASH) Obsoletes: python-petsc4py-openmpi < 3.13.0-2.fc33 Processing files: petsc4py-mpich-devel-3.13.0-2.fc33.x86_64 Provides: petsc4py-mpich-devel = 3.13.0-2.fc33 petsc4py-mpich-devel(x86-64) = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-petsc4py-mpich-3.13.0-2.fc33.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.qMpkQw + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-mpich + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-mpich + cp -pr petsc4py-mpich/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-mpich + cp -pr petsc4py-mpich/README.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/doc/python3-petsc4py-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Vk0G8v + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-mpich + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-mpich + cp -pr petsc4py-mpich/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64/usr/share/licenses/python3-petsc4py-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-petsc4py-mpich = 3.13.0-2.fc33 python3-petsc4py-mpich = 3.13.0-2.fc33 python3-petsc4py-mpich(x86-64) = 3.13.0-2.fc33 python3.8-petsc4py-mpich = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libpetsc.so.3.13()(64bit)(mpich-x86_64) python(abi) = 3.8 rtld(GNU_HASH) Obsoletes: python-petsc4py-mpich < 3.13.0-2.fc33 Processing files: petsc4py-debugsource-3.13.0-2.fc33.x86_64 Provides: petsc4py-debugsource = 3.13.0-2.fc33 petsc4py-debugsource(x86-64) = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: petsc4py-debuginfo-3.13.0-2.fc33.x86_64 Provides: petsc4py-debuginfo = 3.13.0-2.fc33 petsc4py-debuginfo(x86-64) = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: petsc4py-debugsource(x86-64) = 3.13.0-2.fc33 Processing files: python3-petsc4py-openmpi-debuginfo-3.13.0-2.fc33.x86_64 Provides: debuginfo(build-id) = bc627c4e1fa65d41e77fe9e3c142d3576fb510db python-petsc4py-openmpi-debuginfo = 3.13.0-2.fc33 python3-petsc4py-openmpi-debuginfo = 3.13.0-2.fc33 python3-petsc4py-openmpi-debuginfo(x86-64) = 3.13.0-2.fc33 python3.8-petsc4py-openmpi-debuginfo = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: petsc4py-debugsource(x86-64) = 3.13.0-2.fc33 Processing files: python3-petsc4py-mpich-debuginfo-3.13.0-2.fc33.x86_64 Provides: debuginfo(build-id) = 0255a9cb365f0150c899749b5328dbb88b72d2cd python-petsc4py-mpich-debuginfo = 3.13.0-2.fc33 python3-petsc4py-mpich-debuginfo = 3.13.0-2.fc33 python3-petsc4py-mpich-debuginfo(x86-64) = 3.13.0-2.fc33 python3.8-petsc4py-mpich-debuginfo = 3.13.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: petsc4py-debugsource(x86-64) = 3.13.0-2.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 Wrote: /builddir/build/RPMS/petsc4py-openmpi-devel-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-mpich-devel-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-petsc4py-openmpi-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-petsc4py-mpich-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-debuginfo-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-petsc4py-openmpi-debuginfo-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-debugsource-3.13.0-2.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-petsc4py-mpich-debuginfo-3.13.0-2.fc33.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.yzBRBw + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.13.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/petsc4py-3.13.0-2.fc33.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild petsc4py-3.13.0-2.fc33.src.rpm Finish: build phase for petsc4py-3.13.0-2.fc33.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1590465762.259594/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1590465762.259594/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1590465762.259594/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/petsc4py-3.13.0-2.fc33.src.rpm) Config(child) 8 minutes 40 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run