Warning: Permanently added '52.90.207.153' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 1387859 --chroot fedora-rawhide-x86_64 --detached Version: 0.38 Task: {'build_id': 1387859, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fetch_sources_only': True, 'git_hash': '1e47d65f38802a37122a654f0a3e7dbca4d3aab0', 'git_repo': 'dormouse/Cython-3.0_py38/python-steps', 'memory_reqs': 2048, 'package_name': 'python-steps', 'package_version': '3.5.0-1.fc31', 'project_dirname': 'Cython-3.0_py38', 'project_name': 'Cython-3.0_py38', 'project_owner': 'dormouse', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dormouse/Cython-3.0_py38/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'dormouse/Cython-3.0_py38--dormouse', 'source_json': {'clone_url': 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-steps.git', 'committish': '1e47d65f38802a37122a654f0a3e7dbca4d3aab0'}, 'source_type': 8, 'submitter': 'dormouse', 'task_id': '1387859-fedora-rawhide-x86_64', 'timeout': 86400, 'use_bootstrap_container': False, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-steps.git /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dormouse/Cython-3.0_py38/python-steps.git', '/tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps'... Running: git checkout 1e47d65f38802a37122a654f0a3e7dbca4d3aab0 cmd: ['git', 'checkout', '1e47d65f38802a37122a654f0a3e7dbca4d3aab0'] cwd: /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps rc: 0 stdout: stderr: Note: switching to '1e47d65f38802a37122a654f0a3e7dbca4d3aab0'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c <new-branch-name> Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 1e47d65 automatic import of python-steps Running: cp -r . /tmp/copr-rpmbuild-sna7nhs5 cmd: ['cp', '-r', '.', '/tmp/copr-rpmbuild-sna7nhs5'] cwd: /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps rc: 0 stdout: stderr: Generated rpkg config: [rpkg] preprocess_spec = True # auto-packing is deprecated: auto_pack = True [git] lookaside = https://copr-dist-git.fedorainfracloud.org/repo/pkgs/%(ns2)s/%(ns1)s/%(name)s/%(filename)s/%(hashtype)s/%(hash)s/%(filename)s anongiturl = https://copr-dist-git.fedorainfracloud.org/git/%(module)s Writing config into /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/.config/rpkg.conf Running: rpkg -C /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/.config/rpkg.conf sources --outdir /tmp/copr-rpmbuild-sna7nhs5 cmd: ['rpkg', '-C', '/tmp/copr-rpmbuild-sna7nhs5/obtain-sources/.config/rpkg.conf', 'sources', '--outdir', '/tmp/copr-rpmbuild-sna7nhs5'] cwd: /tmp/copr-rpmbuild-sna7nhs5/obtain-sources/python-steps rc: 0 stdout: Downloading steps-3.5.0.tar.gz from lookaside cache at copr-dist-git.fedorainfracloud.org stderr: /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=86400): unbuffer mock --buildsrpm --spec /tmp/copr-rpmbuild-sna7nhs5/python-steps.spec --sources /tmp/copr-rpmbuild-sna7nhs5 --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1589559227.245099 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/tmp/copr-rpmbuild-sna7nhs5/python-steps.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1589559227.245099/root. INFO: calling preinit hooks INFO: enabled root cache INFO: /var/lib/copr-rpmbuild/results/configs/child.cfg newer than root cache; cache will be rebuilt INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Copr repository 37 kB/s | 3.6 kB 00:00 Copr repository 3.5 MB/s | 419 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 11 kB/s | 3.8 kB 00:00 fedora 72 kB/s | 11 kB 00:00 Dependencies resolved. ============================================================================================================================================== Package Arch Version Repository Size ============================================================================================================================================== Installing group/module packages: 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k [1mperl-srpm-macros [m noarch 1-34.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 k [1mpkgconf [m x86_64 1.6.3-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k [1mpkgconf-m4 [m noarch 1.6.3-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k [1mpkgconf-pkg-config [m x86_64 1.6.3-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.7 k [1mpopt [m x86_64 1.16-19.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k [1mpublicsuffix-list-dafsa [m noarch 20190417-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56 k [1mpython-srpm-macros [m noarch 3.8-7.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19 k [1mqt5-srpm-macros [m noarch 5.14.2-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k [1mreadline [m x86_64 8.0-4.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207 k [1mrpm [m x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 503 k [1mrpm-build-libs [m x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k [1mrpm-libs [m x86_64 4.15.90-0.git14971.12.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 332 k [1mrust-srpm-macros [m noarch 14-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 k [1msetup [m noarch 2.13.6-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k [1msqlite-libs [m x86_64 3.31.1-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 611 k [1msystemd-libs [m x86_64 245.5-2.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 558 k [1mtzdata [m noarch 2020a-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 430 k [1mxxhash-libs [m x86_64 0.7.3-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29 k [1mxz-libs [m x86_64 5.2.5-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90 k [1mzip [m x86_64 3.0-26.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 260 k [1mzlib [m x86_64 1.2.11-21.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k [1mzstd [m x86_64 1.4.4-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 387 k Installing Groups: Buildsystem building group Transaction Summary ============================================================================================================================================== Install 144 Packages Total size: 57 M Installed size: 229 M Downloading Packages: [SKIPPED] alternatives-1.11-6.fc32.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-9.fc32.noarch.rpm: Already downloaded [SKIPPED] bash-5.0.11-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.34-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.34-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2020.2.40-3.fc32.noarch.rpm: Already downloaded [SKIPPED] coreutils-8.32-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-8.32-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.6-22.fc32.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20200312-1.git3ae59d2.fc33.noarch.rpm: Already downloaded [SKIPPED] curl-7.70.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.27-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] diffutils-3.7-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.13-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-4-4.fc32.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.179-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.179-2.fc33.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.179-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.179-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] expat-2.2.8-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-33-0.5.noarch.rpm: Already downloaded [SKIPPED] fedora-release-33-0.8.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-33-0.8.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-33-0.8.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-33-0.5.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-33-0.5.noarch.rpm: Already downloaded [SKIPPED] file-5.38-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.38-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] filesystem-3.14-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.7.0-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-3.0.3-1.fc33.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-1.fc32.noarch.rpm: Already downloaded [SKIPPED] gawk-5.0.1-7.fc32.x86_64.rpm: Already downloaded [SKIPPED] gc-8.0.4-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] gdb-minimal-9.1-6.fc33.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.5.0-2.fc32.noarch.rpm: Already downloaded [SKIPPED] glibc-2.31.9000-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.31.9000-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.31.9000-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] gmp-6.2.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-4-11.fc32.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.0.8-5.fc32.noarch.rpm: Already downloaded [SKIPPED] grep-3.4-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] guile22-2.2.6-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.10-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] info-6.7-7.fc33.x86_64.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] krb5-libs-1.18.1-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] libacl-2.2.53-5.fc32.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.4.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.4.48-8.fc32.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.35.1-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.0.7-10.fc32.x86_64.rpm: Already downloaded [SKIPPED] libcap-2.26-7.fc32.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.7.10-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.45.6-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] libcurl-7.70.0-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-40.fc32.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.35.1-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] libffi-3.1-25.fc33.x86_64.rpm: Already downloaded 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libsigsegv-2.11-10.fc32.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.35.1-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] libssh-0.9.4-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] libssh-config-0.9.4-2.fc33.noarch.rpm: Already downloaded [SKIPPED] libstdc++-10.1.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] libtasn1-4.16.0-1.fc32.x86_64.rpm: Already downloaded [SKIPPED] libtirpc-1.2.6-0.fc33.x86_64.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.6-34.fc33.x86_64.rpm: Already downloaded [SKIPPED] libunistring-0.9.10-7.fc32.x86_64.rpm: Already downloaded [SKIPPED] libutempter-1.1.6-18.fc32.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.35.1-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] libverto-0.3.0-9.fc32.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.16-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] libxml2-2.9.10-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] libzstd-1.4.4-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] lua-libs-5.3.5-7.fc32.x86_64.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.1-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] make-4.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] mpfr-4.0.2-4.fc33.x86_64.rpm: Already downloaded [SKIPPED] ncurses-6.2-1.20200222.fc33.x86_64.rpm: Already downloaded [SKIPPED] ncurses-base-6.2-1.20200222.fc33.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.2-1.20200222.fc33.x86_64.rpm: Already downloaded [SKIPPED] nim-srpm-macros-3-2.fc32.noarch.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-6-2.fc32.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-7.fc32.noarch.rpm: Already downloaded [SKIPPED] openldap-2.4.47-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] openssl-libs-1.1.1g-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-0.23.20-1.fc32.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.23.20-1.fc32.x86_64.rpm: Already downloaded [SKIPPED] pam-1.3.1-26.fc33.x86_64.rpm: Already downloaded [SKIPPED] patch-2.7.6-12.fc32.x86_64.rpm: Already downloaded [SKIPPED] pcre-8.44-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] pcre2-10.35-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.35-1.fc33.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-34.fc32.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.6.3-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.6.3-3.fc32.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.6.3-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] popt-1.16-19.fc32.x86_64.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20190417-3.fc32.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.8-7.fc33.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.14.2-3.fc33.noarch.rpm: Already downloaded [SKIPPED] readline-8.0-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] redhat-rpm-config-154-1.fc33.noarch.rpm: Already downloaded [SKIPPED] rpm-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.15.90-0.git14971.12.fc33.x86_64.rpm: Already downloaded [SKIPPED] rust-srpm-macros-14-1.fc33.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] setup-2.13.6-2.fc32.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.8.1-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.31.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-245.5-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] tar-1.32-4.fc32.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2020a-1.fc33.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-47.fc32.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.35.1-9.fc33.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-19.fc33.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.7.3-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.5-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-26.fc32.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.11-21.fc32.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.4.4-2.fc32.x86_64.rpm: Already downloaded Running transaction check warning: Generating 18 missing index(es), please wait... Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.14-2.fc32.x86_64 1/1 Preparing : 1/1 Installing : libgcc-10.1.1-1.fc33.x86_64 1/144 Running scriptlet: libgcc-10.1.1-1.fc33.x86_64 1/144 Installing : fedora-release-identity-basic-33-0.8.noarch 2/144 Installing : tzdata-2020a-1.fc33.noarch 3/144 Installing : rust-srpm-macros-14-1.fc33.noarch 4/144 Installing : qt5-srpm-macros-5.14.2-3.fc33.noarch 5/144 Installing : publicsuffix-list-dafsa-20190417-3.fc32.noarch 6/144 Installing : pkgconf-m4-1.6.3-3.fc32.noarch 7/144 Installing : perl-srpm-macros-1-34.fc32.noarch 8/144 Installing : pcre2-syntax-10.35-1.fc33.noarch 9/144 Installing : openblas-srpm-macros-2-7.fc32.noarch 10/144 Installing : ocaml-srpm-macros-6-2.fc32.noarch 11/144 Installing : nim-srpm-macros-3-2.fc32.noarch 12/144 Installing : ncurses-base-6.2-1.20200222.fc33.noarch 13/144 Installing : libssh-config-0.9.4-2.fc33.noarch 14/144 Installing : gnat-srpm-macros-4-11.fc32.noarch 15/144 Installing : ghc-srpm-macros-1.5.0-2.fc32.noarch 16/144 Installing : fpc-srpm-macros-1.3-1.fc32.noarch 17/144 Installing : fedora-gpg-keys-33-0.5.noarch 18/144 Installing : fedora-release-33-0.8.noarch 19/144 Installing : fedora-release-common-33-0.8.noarch 20/144 Installing : fedora-repos-rawhide-33-0.5.noarch 21/144 Installing : fedora-repos-33-0.5.noarch 22/144 Installing : setup-2.13.6-2.fc32.noarch 23/144 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.13.6-2.fc32.noarch 23/144 Installing : filesystem-3.14-2.fc32.x86_64 24/144 Installing : basesystem-11-9.fc32.noarch 25/144 Installing : glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 26/144 Installing : glibc-common-2.31.9000-13.fc33.x86_64 27/144 Running scriptlet: glibc-2.31.9000-13.fc33.x86_64 28/144 Installing : glibc-2.31.9000-13.fc33.x86_64 28/144 Running scriptlet: glibc-2.31.9000-13.fc33.x86_64 28/144 Installing : ncurses-libs-6.2-1.20200222.fc33.x86_64 29/144 Installing : bash-5.0.11-2.fc32.x86_64 30/144 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Installing : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 119/144 Installing : libpwquality-1.4.2-2.fc32.x86_64 120/144 Installing : pam-1.3.1-26.fc33.x86_64 121/144 Installing : libfdisk-2.35.1-9.fc33.x86_64 122/144 Installing : libmount-2.35.1-9.fc33.x86_64 123/144 Installing : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 124/144 Installing : openldap-2.4.47-4.fc32.x86_64 125/144 Installing : libssh-0.9.4-2.fc33.x86_64 126/144 Installing : libcurl-7.70.0-1.fc33.x86_64 127/144 Installing : curl-7.70.0-1.fc33.x86_64 128/144 Installing : guile22-2.2.6-4.fc32.x86_64 129/144 Running scriptlet: guile22-2.2.6-4.fc32.x86_64 129/144 Installing : systemd-libs-245.5-2.fc33.x86_64 130/144 Running scriptlet: systemd-libs-245.5-2.fc33.x86_64 130/144 Installing : libarchive-3.4.2-1.fc33.x86_64 131/144 Installing : rpm-4.15.90-0.git14971.12.fc33.x86_64 132/144 Installing : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 133/144 Installing : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 134/144 Installing : 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binutils-2.34-4.fc33.x86_64 5/144 Verifying : binutils-gold-2.34-4.fc33.x86_64 6/144 Verifying : bzip2-1.0.8-2.fc32.x86_64 7/144 Verifying : bzip2-libs-1.0.8-2.fc32.x86_64 8/144 Verifying : ca-certificates-2020.2.40-3.fc32.noarch 9/144 Verifying : coreutils-8.32-5.fc33.x86_64 10/144 Verifying : coreutils-common-8.32-5.fc33.x86_64 11/144 Verifying : cpio-2.13-5.fc33.x86_64 12/144 Verifying : cracklib-2.9.6-22.fc32.x86_64 13/144 Verifying : crypto-policies-20200312-1.git3ae59d2.fc33.noarc 14/144 Verifying : curl-7.70.0-1.fc33.x86_64 15/144 Verifying : cyrus-sasl-lib-2.1.27-5.fc33.x86_64 16/144 Verifying : diffutils-3.7-4.fc32.x86_64 17/144 Verifying : dwz-0.13-2.fc32.x86_64 18/144 Verifying : efi-srpm-macros-4-4.fc32.noarch 19/144 Verifying : elfutils-0.179-2.fc33.x86_64 20/144 Verifying : elfutils-default-yama-scope-0.179-2.fc33.noarch 21/144 Verifying : elfutils-libelf-0.179-2.fc33.x86_64 22/144 Verifying : elfutils-libs-0.179-2.fc33.x86_64 23/144 Verifying : expat-2.2.8-2.fc32.x86_64 24/144 Verifying : fedora-gpg-keys-33-0.5.noarch 25/144 Verifying : fedora-release-33-0.8.noarch 26/144 Verifying : fedora-release-common-33-0.8.noarch 27/144 Verifying : fedora-release-identity-basic-33-0.8.noarch 28/144 Verifying : fedora-repos-33-0.5.noarch 29/144 Verifying : fedora-repos-rawhide-33-0.5.noarch 30/144 Verifying : file-5.38-3.fc33.x86_64 31/144 Verifying : file-libs-5.38-3.fc33.x86_64 32/144 Verifying : filesystem-3.14-2.fc32.x86_64 33/144 Verifying : findutils-1:4.7.0-4.fc33.x86_64 34/144 Verifying : fonts-srpm-macros-3.0.3-1.fc33.noarch 35/144 Verifying : fpc-srpm-macros-1.3-1.fc32.noarch 36/144 Verifying : gawk-5.0.1-7.fc32.x86_64 37/144 Verifying : gc-8.0.4-3.fc32.x86_64 38/144 Verifying : gdb-minimal-9.1-6.fc33.x86_64 39/144 Verifying : ghc-srpm-macros-1.5.0-2.fc32.noarch 40/144 Verifying : glibc-2.31.9000-13.fc33.x86_64 41/144 Verifying : glibc-common-2.31.9000-13.fc33.x86_64 42/144 Verifying : glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 43/144 Verifying : 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Verifying : libgcc-10.1.1-1.fc33.x86_64 65/144 Verifying : libgcrypt-1.8.5-6.fc33.x86_64 66/144 Verifying : libgomp-10.1.1-1.fc33.x86_64 67/144 Verifying : libgpg-error-1.37-1.fc33.x86_64 68/144 Verifying : libidn2-2.3.0-2.fc32.x86_64 69/144 Verifying : libmetalink-0.1.3-10.fc32.x86_64 70/144 Verifying : libmount-2.35.1-9.fc33.x86_64 71/144 Verifying : libnghttp2-1.40.0-2.fc32.x86_64 72/144 Verifying : libnsl2-1.2.0-6.20180605git4a062cf.fc32.x86_64 73/144 Verifying : libpkgconf-1.6.3-3.fc32.x86_64 74/144 Verifying : libpsl-0.21.0-4.fc32.x86_64 75/144 Verifying : libpwquality-1.4.2-2.fc32.x86_64 76/144 Verifying : libselinux-3.0-4.fc33.x86_64 77/144 Verifying : libsemanage-3.0-3.fc32.x86_64 78/144 Verifying : libsepol-3.0-3.fc32.x86_64 79/144 Verifying : libsigsegv-2.11-10.fc32.x86_64 80/144 Verifying : libsmartcols-2.35.1-9.fc33.x86_64 81/144 Verifying : libssh-0.9.4-2.fc33.x86_64 82/144 Verifying : libssh-config-0.9.4-2.fc33.noarch 83/144 Verifying : libstdc++-10.1.1-1.fc33.x86_64 84/144 Verifying : libtasn1-4.16.0-1.fc32.x86_64 85/144 Verifying : libtirpc-1.2.6-0.fc33.x86_64 86/144 Verifying : libtool-ltdl-2.4.6-34.fc33.x86_64 87/144 Verifying : libunistring-0.9.10-7.fc32.x86_64 88/144 Verifying : libutempter-1.1.6-18.fc32.x86_64 89/144 Verifying : libuuid-2.35.1-9.fc33.x86_64 90/144 Verifying : libverto-0.3.0-9.fc32.x86_64 91/144 Verifying : libxcrypt-4.4.16-3.fc33.x86_64 92/144 Verifying : libxml2-2.9.10-4.fc33.x86_64 93/144 Verifying : libzstd-1.4.4-2.fc32.x86_64 94/144 Verifying : lua-libs-5.3.5-7.fc32.x86_64 95/144 Verifying : lz4-libs-1.9.1-2.fc32.x86_64 96/144 Verifying : make-1:4.3-1.fc33.x86_64 97/144 Verifying : mpfr-4.0.2-4.fc33.x86_64 98/144 Verifying : ncurses-6.2-1.20200222.fc33.x86_64 99/144 Verifying : ncurses-base-6.2-1.20200222.fc33.noarch 100/144 Verifying : ncurses-libs-6.2-1.20200222.fc33.x86_64 101/144 Verifying : nim-srpm-macros-3-2.fc32.noarch 102/144 Verifying : ocaml-srpm-macros-6-2.fc32.noarch 103/144 Verifying : openblas-srpm-macros-2-7.fc32.noarch 104/144 Verifying : openldap-2.4.47-4.fc32.x86_64 105/144 Verifying : openssl-libs-1:1.1.1g-1.fc33.x86_64 106/144 Verifying : p11-kit-0.23.20-1.fc32.x86_64 107/144 Verifying : p11-kit-trust-0.23.20-1.fc32.x86_64 108/144 Verifying : pam-1.3.1-26.fc33.x86_64 109/144 Verifying : patch-2.7.6-12.fc32.x86_64 110/144 Verifying : pcre-8.44-1.fc33.x86_64 111/144 Verifying : pcre2-10.35-1.fc33.x86_64 112/144 Verifying : pcre2-syntax-10.35-1.fc33.noarch 113/144 Verifying : perl-srpm-macros-1-34.fc32.noarch 114/144 Verifying : pkgconf-1.6.3-3.fc32.x86_64 115/144 Verifying : pkgconf-m4-1.6.3-3.fc32.noarch 116/144 Verifying : pkgconf-pkg-config-1.6.3-3.fc32.x86_64 117/144 Verifying : popt-1.16-19.fc32.x86_64 118/144 Verifying : publicsuffix-list-dafsa-20190417-3.fc32.noarch 119/144 Verifying : python-srpm-macros-3.8-7.fc33.noarch 120/144 Verifying : qt5-srpm-macros-5.14.2-3.fc33.noarch 121/144 Verifying : readline-8.0-4.fc32.x86_64 122/144 Verifying : redhat-rpm-config-154-1.fc33.noarch 123/144 Verifying : rpm-4.15.90-0.git14971.12.fc33.x86_64 124/144 Verifying : rpm-build-4.15.90-0.git14971.12.fc33.x86_64 125/144 Verifying : rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 126/144 Verifying : rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 127/144 Verifying : rust-srpm-macros-14-1.fc33.noarch 128/144 Verifying : sed-4.8-1.fc33.x86_64 129/144 Verifying : setup-2.13.6-2.fc32.noarch 130/144 Verifying : shadow-utils-2:4.8.1-3.fc33.x86_64 131/144 Verifying : sqlite-libs-3.31.1-1.fc33.x86_64 132/144 Verifying : systemd-libs-245.5-2.fc33.x86_64 133/144 Verifying : tar-2:1.32-4.fc32.x86_64 134/144 Verifying : tzdata-2020a-1.fc33.noarch 135/144 Verifying : unzip-6.0-47.fc32.x86_64 136/144 Verifying : util-linux-2.35.1-9.fc33.x86_64 137/144 Verifying : which-2.21-19.fc33.x86_64 138/144 Verifying : xxhash-libs-0.7.3-1.fc33.x86_64 139/144 Verifying : xz-5.2.5-1.fc33.x86_64 140/144 Verifying : xz-libs-5.2.5-1.fc33.x86_64 141/144 Verifying : zip-3.0-26.fc32.x86_64 142/144 Verifying : zlib-1.2.11-21.fc32.x86_64 143/144 Verifying : zstd-1.4.4-2.fc32.x86_64 144/144 Installed: alternatives-1.11-6.fc32.x86_64 audit-libs-3.0-0.19.20191104git1c2f876.fc33.x86_64 basesystem-11-9.fc32.noarch bash-5.0.11-2.fc32.x86_64 binutils-2.34-4.fc33.x86_64 binutils-gold-2.34-4.fc33.x86_64 bzip2-1.0.8-2.fc32.x86_64 bzip2-libs-1.0.8-2.fc32.x86_64 ca-certificates-2020.2.40-3.fc32.noarch coreutils-8.32-5.fc33.x86_64 coreutils-common-8.32-5.fc33.x86_64 cpio-2.13-5.fc33.x86_64 cracklib-2.9.6-22.fc32.x86_64 crypto-policies-20200312-1.git3ae59d2.fc33.noarch curl-7.70.0-1.fc33.x86_64 cyrus-sasl-lib-2.1.27-5.fc33.x86_64 diffutils-3.7-4.fc32.x86_64 dwz-0.13-2.fc32.x86_64 efi-srpm-macros-4-4.fc32.noarch elfutils-0.179-2.fc33.x86_64 elfutils-default-yama-scope-0.179-2.fc33.noarch elfutils-libelf-0.179-2.fc33.x86_64 elfutils-libs-0.179-2.fc33.x86_64 expat-2.2.8-2.fc32.x86_64 fedora-gpg-keys-33-0.5.noarch fedora-release-33-0.8.noarch fedora-release-common-33-0.8.noarch fedora-release-identity-basic-33-0.8.noarch fedora-repos-33-0.5.noarch fedora-repos-rawhide-33-0.5.noarch file-5.38-3.fc33.x86_64 file-libs-5.38-3.fc33.x86_64 filesystem-3.14-2.fc32.x86_64 findutils-1:4.7.0-4.fc33.x86_64 fonts-srpm-macros-3.0.3-1.fc33.noarch fpc-srpm-macros-1.3-1.fc32.noarch gawk-5.0.1-7.fc32.x86_64 gc-8.0.4-3.fc32.x86_64 gdb-minimal-9.1-6.fc33.x86_64 ghc-srpm-macros-1.5.0-2.fc32.noarch glibc-2.31.9000-13.fc33.x86_64 glibc-common-2.31.9000-13.fc33.x86_64 glibc-minimal-langpack-2.31.9000-13.fc33.x86_64 gmp-1:6.2.0-1.fc33.x86_64 gnat-srpm-macros-4-11.fc32.noarch go-srpm-macros-3.0.8-5.fc32.noarch grep-3.4-1.fc33.x86_64 guile22-2.2.6-4.fc32.x86_64 gzip-1.10-2.fc32.x86_64 info-6.7-7.fc33.x86_64 keyutils-libs-1.6-4.fc32.x86_64 krb5-libs-1.18.1-4.fc33.x86_64 libacl-2.2.53-5.fc32.x86_64 libarchive-3.4.2-1.fc33.x86_64 libattr-2.4.48-8.fc32.x86_64 libblkid-2.35.1-9.fc33.x86_64 libbrotli-1.0.7-10.fc32.x86_64 libcap-2.26-7.fc32.x86_64 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readline-8.0-4.fc32.x86_64 redhat-rpm-config-154-1.fc33.noarch rpm-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-4.15.90-0.git14971.12.fc33.x86_64 rpm-build-libs-4.15.90-0.git14971.12.fc33.x86_64 rpm-libs-4.15.90-0.git14971.12.fc33.x86_64 rust-srpm-macros-14-1.fc33.noarch sed-4.8-1.fc33.x86_64 setup-2.13.6-2.fc32.noarch shadow-utils-2:4.8.1-3.fc33.x86_64 sqlite-libs-3.31.1-1.fc33.x86_64 systemd-libs-245.5-2.fc33.x86_64 tar-2:1.32-4.fc32.x86_64 tzdata-2020a-1.fc33.noarch unzip-6.0-47.fc32.x86_64 util-linux-2.35.1-9.fc33.x86_64 which-2.21-19.fc33.x86_64 xxhash-libs-0.7.3-1.fc33.x86_64 xz-5.2.5-1.fc33.x86_64 xz-libs-5.2.5-1.fc33.x86_64 zip-3.0-26.fc32.x86_64 zlib-1.2.11-21.fc32.x86_64 zstd-1.4.4-2.fc32.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1585958400 Wrote: /builddir/build/SRPMS/python-steps-3.5.0-1.fc33.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1589559227.245099/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1589559227.245099/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1589559227.245099/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/tmp/copr-rpmbuild-sna7nhs5/python-steps.spec) Config(child) 0 minutes 23 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=86400): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/python-steps-3.5.0-1.fc33.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1589559251.745142 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.2 starting (python version = 3.7.6)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/python-steps-3.5.0-1.fc33.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1589559251.745142/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.2 INFO: Mock Version: 2.2 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Copr repository 135 kB/s | 3.6 kB 00:00 Copr repository 6.0 MB/s | 439 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 11 kB/s | 3.8 kB 00:00 fedora 34 kB/s | 11 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for python-steps-3.5.0-1.fc33.src.rpm Start: build setup for python-steps-3.5.0-1.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1585958400 Wrote: /builddir/build/SRPMS/python-steps-3.5.0-1.fc33.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Copr repository 154 kB/s | 3.6 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 11 kB/s | 3.8 kB 00:00 fedora 38 kB/s | 11 kB 00:00 Dependencies resolved. =================================================================================================================================== Package Arch Version Repository Size =================================================================================================================================== Installing: [1mRandom123-devel [m x86_64 1.13.2-2.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 47 k [1mcmake [m x86_64 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.7 M [1mpmix [m x86_64 3.1.5-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 516 k [1mprocps-ng [m x86_64 3.3.15-7.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326 k [1mptscotch-mpich [m x86_64 6.0.9-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 518 k [1mptscotch-openmpi [m x86_64 6.0.9-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 521 k [1mpython-pip-wheel [m noarch 20.0.2-4.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M [1mpython-rpm-macros [m noarch 3.8-7.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k [1mpython-setuptools-wheel [m noarch 46.2.0-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 293 k [1mpython3 [m x86_64 3.8.3~rc1-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29 k [1mpython3-libs [m x86_64 3.8.3~rc1-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.4 M [1mpython3-rpm-generators [m noarch 11-6.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26 k [1mpython3-rpm-macros [m noarch 3.8-7.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 k [1mpython3-setuptools [m noarch 46.2.0-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 596 k [1mqrencode-libs [m x86_64 4.0.2-5.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60 k [1mrdma-core [m x86_64 29.0-1.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 59 k [1mrhash [m x86_64 1.3.8-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 180 k [1mscalapack-common [m x86_64 2.1.0-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18 k [1mscalapack-mpich [m x86_64 2.1.0-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 M [1mscalapack-openmpi [m x86_64 2.1.0-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 M [1mscotch [m x86_64 6.0.9-2.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 372 k [1msuitesparse [m x86_64 5.4.0-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M [1msuitesparse64 [m x86_64 5.4.0-3.fc32 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M [1msundials-mpich [m x86_64 5.2.0-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 878 k [1msundials-openmpi [m x86_64 5.2.0-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 880 k [1msuperlu_dist-mpich [m x86_64 1:6.1.1-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 373 k [1msuperlu_dist-openmpi [m x86_64 1:6.1.1-3.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 389 k [1msystemd [m x86_64 245.5-2.fc33 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 M [1msystemd-pam [m x86_64 245.5-2.fc33 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=================================================================================================================================== Install 193 Packages Total size: 229 M Total download size: 77 M Installed size: 934 M Downloading Packages: [SKIPPED] python3-Cython-3.0~a3-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] Lmod-8.3.12-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] SuperLU-5.2.1-10.fc33.x86_64.rpm: Already downloaded [SKIPPED] acl-2.2.53-5.fc32.x86_64.rpm: Already downloaded [SKIPPED] annobin-9.21-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cmake-3.17.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cmake-data-3.17.2-1.fc33.noarch.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.17.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cmake-rpm-macros-3.17.2-1.fc33.noarch.rpm: Already downloaded [SKIPPED] cpp-10.1.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] cryptsetup-libs-2.3.2-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] dbus-1.12.16-5.fc33.x86_64.rpm: Already downloaded [SKIPPED] dbus-broker-23-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] dbus-common-1.12.16-5.fc33.noarch.rpm: Already downloaded [SKIPPED] dejavu-sans-fonts-2.37-12.fc33.noarch.rpm: Already downloaded [SKIPPED] device-mapper-1.02.171-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] device-mapper-libs-1.02.171-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] dracut-050-26.git20200316.fc33.x86_64.rpm: Already downloaded [SKIPPED] emacs-filesystem-26.3-3.fc33.noarch.rpm: Already downloaded [SKIPPED] fontconfig-2.13.92-11.fc33.x86_64.rpm: Already downloaded [SKIPPED] fonts-filesystem-3.0.3-1.fc33.noarch.rpm: Already downloaded [SKIPPED] freetype-2.10.1-2.fc32.x86_64.rpm: Already downloaded [SKIPPED] gcc-10.1.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] gcc-c++-10.1.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] gcc-gfortran-10.1.1-1.fc33.x86_64.rpm: Already downloaded [SKIPPED] gdbm-libs-1.18.1-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] glibc-devel-2.31.9000-13.fc33.x86_64.rpm: Already downloaded [SKIPPED] glibc-headers-x86-2.31.9000-13.fc33.noarch.rpm: Already downloaded [SKIPPED] gnutls-3.6.13-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] hdf5-1.10.5-6.fc32.x86_64.rpm: Already downloaded [SKIPPED] hwdata-0.335-1.fc33.noarch.rpm: Already downloaded [SKIPPED] hwloc-libs-2.0.4-3.fc32.x86_64.rpm: Already downloaded [SKIPPED] infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_64.rpm: Already downloaded [SKIPPED] iptables-libs-1.8.4-7.fc33.x86_64.rpm: Already downloaded [SKIPPED] isl-0.16.1-10.fc32.x86_64.rpm: Already downloaded [SKIPPED] json-c-0.14-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] jsoncpp-1.9.2-2.fc33.x86_64.rpm: Already downloaded [SKIPPED] kbd-2.2.0-3.fc33.x86_64.rpm: Already downloaded [SKIPPED] kbd-legacy-2.2.0-3.fc33.noarch.rpm: Already downloaded [SKIPPED] kbd-misc-2.2.0-3.fc33.noarch.rpm: Already downloaded [SKIPPED] kernel-headers-5.7.0-0.rc5.git0.1.fc33.x86_64.rpm: Already downloaded [SKIPPED] 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00:00 (190/193): sundials-openmpi-devel-5.2.0-3.fc33. 2.0 MB/s | 301 kB 00:00 (191/193): superlu_dist-mpich-6.1.1-3.fc33.x86_ 2.3 MB/s | 373 kB 00:00 (192/193): tbb-2020.2-2.fc33.x86_64.rpm 1.2 MB/s | 179 kB 00:00 (193/193): superlu_dist-openmpi-6.1.1-3.fc33.x8 2.1 MB/s | 389 kB 00:00 -------------------------------------------------------------------------------- Total 13 MB/s | 77 MB 00:06 Running transaction check Transaction check succeeded. 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dracut-050-26.git20200316.fc33.x86_64 23/193 Verifying : emacs-filesystem-1:26.3-3.fc33.noarch 24/193 Verifying : fontconfig-2.13.92-11.fc33.x86_64 25/193 Verifying : fonts-filesystem-3.0.3-1.fc33.noarch 26/193 Verifying : freetype-2.10.1-2.fc32.x86_64 27/193 Verifying : gcc-10.1.1-1.fc33.x86_64 28/193 Verifying : gcc-c++-10.1.1-1.fc33.x86_64 29/193 Verifying : gcc-gfortran-10.1.1-1.fc33.x86_64 30/193 Verifying : gdbm-libs-1:1.18.1-3.fc32.x86_64 31/193 Verifying : git-core-2.26.2-1.fc33.x86_64 32/193 Verifying : glibc-devel-2.31.9000-13.fc33.x86_64 33/193 Verifying : glibc-headers-x86-2.31.9000-13.fc33.noarch 34/193 Verifying : gnutls-3.6.13-2.fc33.x86_64 35/193 Verifying : gtest-1.10.0-1.fc33.x86_64 36/193 Verifying : gtest-devel-1.10.0-1.fc33.x86_64 37/193 Verifying : hdf5-1.10.5-6.fc32.x86_64 38/193 Verifying : hdf5-mpich-1.10.5-6.fc32.x86_64 39/193 Verifying : hdf5-openmpi-1.10.5-6.fc32.x86_64 40/193 Verifying : hwdata-0.335-1.fc33.noarch 41/193 Verifying : 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libuv-1:1.37.0-1.fc33.x86_64 101/193 Verifying : libxcb-1.13.1-4.fc32.x86_64 102/193 Verifying : libxcrypt-devel-4.4.16-3.fc33.x86_64 103/193 Verifying : libxshmfence-1.3-6.fc32.x86_64 104/193 Verifying : lua-5.3.5-7.fc32.x86_64 105/193 Verifying : lua-filesystem-1.6.3-12.fc32.x86_64 106/193 Verifying : lua-json-1.3.2-14.fc32.noarch 107/193 Verifying : lua-lpeg-1.0.2-2.fc32.x86_64 108/193 Verifying : lua-posix-33.3.1-16.fc32.x86_64 109/193 Verifying : lua-term-0.07-10.fc32.x86_64 110/193 Verifying : mesa-libGL-20.0.7-1.fc33.x86_64 111/193 Verifying : mesa-libGLU-9.0.1-2.fc32.x86_64 112/193 Verifying : mesa-libglapi-20.0.7-1.fc33.x86_64 113/193 Verifying : metis-5.1.0-24.fc32.x86_64 114/193 Verifying : mpich-3.3.2-4.fc33.x86_64 115/193 Verifying : mpich-devel-3.3.2-4.fc33.x86_64 116/193 Verifying : munge-libs-0.5.13-7.fc32.x86_64 117/193 Verifying : nettle-3.6-1.fc33.x86_64 118/193 Verifying : numactl-libs-2.0.12-4.fc32.x86_64 119/193 Verifying : openblas-0.3.9-2.fc33.x86_64 120/193 Verifying : openblas-devel-0.3.9-2.fc33.x86_64 121/193 Verifying : openblas-openmp-0.3.9-2.fc33.x86_64 122/193 Verifying : openblas-openmp64-0.3.9-2.fc33.x86_64 123/193 Verifying : openblas-openmp64_-0.3.9-2.fc33.x86_64 124/193 Verifying : openblas-serial-0.3.9-2.fc33.x86_64 125/193 Verifying : openblas-serial64-0.3.9-2.fc33.x86_64 126/193 Verifying : openblas-serial64_-0.3.9-2.fc33.x86_64 127/193 Verifying : openblas-threads-0.3.9-2.fc33.x86_64 128/193 Verifying : openblas-threads64-0.3.9-2.fc33.x86_64 129/193 Verifying : openblas-threads64_-0.3.9-2.fc33.x86_64 130/193 Verifying : openmpi-4.0.4-0.1.rc1.fc33.x86_64 131/193 Verifying : openmpi-devel-4.0.4-0.1.rc1.fc33.x86_64 132/193 Verifying : opensm-libs-3.3.23-1.fc33.x86_64 133/193 Verifying : openssh-8.2p1-3.fc33.x86_64 134/193 Verifying : openssh-clients-8.2p1-3.fc33.x86_64 135/193 Verifying : orangefs-2.9.7-8.fc33.x86_64 136/193 Verifying : pciutils-3.6.4-1.fc33.x86_64 137/193 Verifying : pciutils-libs-3.6.4-1.fc33.x86_64 138/193 Verifying : perl-Carp-1.50-440.fc32.noarch 139/193 Verifying : perl-Errno-1.30-453.fc33.x86_64 140/193 Verifying : perl-Exporter-5.74-2.fc32.noarch 141/193 Verifying : perl-PathTools-3.78-441.fc32.x86_64 142/193 Verifying : perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 143/193 Verifying : perl-constant-1.33-441.fc32.noarch 144/193 Verifying : perl-interpreter-4:5.30.2-453.fc33.x86_64 145/193 Verifying : perl-libs-4:5.30.2-453.fc33.x86_64 146/193 Verifying : perl-macros-4:5.30.2-453.fc33.noarch 147/193 Verifying : petsc-3.13.1-2.fc33.x86_64 148/193 Verifying : petsc-devel-3.13.1-2.fc33.x86_64 149/193 Verifying : petsc-mpich-3.13.1-2.fc33.x86_64 150/193 Verifying : petsc-mpich-devel-3.13.1-2.fc33.x86_64 151/193 Verifying : petsc-openmpi-3.13.1-2.fc33.x86_64 152/193 Verifying : petsc-openmpi-devel-3.13.1-2.fc33.x86_64 153/193 Verifying : pmix-3.1.5-1.fc33.x86_64 154/193 Verifying : procps-ng-3.3.15-7.fc32.x86_64 155/193 Verifying : ptscotch-mpich-6.0.9-2.fc32.x86_64 156/193 Verifying : ptscotch-openmpi-6.0.9-2.fc32.x86_64 157/193 Verifying : python-pip-wheel-20.0.2-4.fc33.noarch 158/193 Verifying : python-rpm-macros-3.8-7.fc33.noarch 159/193 Verifying : python-setuptools-wheel-46.2.0-1.fc33.noarch 160/193 Verifying : python3-3.8.3~rc1-1.fc33.x86_64 161/193 Verifying : python3-devel-3.8.3~rc1-1.fc33.x86_64 162/193 Verifying : python3-libs-3.8.3~rc1-1.fc33.x86_64 163/193 Verifying : python3-numpy-1:1.18.4-2.fc33.x86_64 164/193 Verifying : python3-rpm-generators-11-6.fc33.noarch 165/193 Verifying : python3-rpm-macros-3.8-7.fc33.noarch 166/193 Verifying : python3-setuptools-46.2.0-1.fc33.noarch 167/193 Verifying : qrencode-libs-4.0.2-5.fc32.x86_64 168/193 Verifying : rdma-core-29.0-1.fc33.x86_64 169/193 Verifying : rhash-1.3.8-3.fc32.x86_64 170/193 Verifying : rpm-mpi-hooks-6-5.fc32.noarch 171/193 Verifying : scalapack-common-2.1.0-2.fc32.x86_64 172/193 Verifying : scalapack-mpich-2.1.0-2.fc32.x86_64 173/193 Verifying : scalapack-openmpi-2.1.0-2.fc32.x86_64 174/193 Verifying : scotch-6.0.9-2.fc32.x86_64 175/193 Verifying : suitesparse-5.4.0-3.fc32.x86_64 176/193 Verifying : suitesparse64-5.4.0-3.fc32.x86_64 177/193 Verifying : sundials-mpich-5.2.0-3.fc33.x86_64 178/193 Verifying : sundials-mpich-devel-5.2.0-3.fc33.x86_64 179/193 Verifying : sundials-openmpi-5.2.0-3.fc33.x86_64 180/193 Verifying : sundials-openmpi-devel-5.2.0-3.fc33.x86_64 181/193 Verifying : superlu_dist-mpich-1:6.1.1-3.fc33.x86_64 182/193 Verifying : superlu_dist-openmpi-1:6.1.1-3.fc33.x86_64 183/193 Verifying : systemd-245.5-2.fc33.x86_64 184/193 Verifying : systemd-pam-245.5-2.fc33.x86_64 185/193 Verifying : systemd-rpm-macros-245.5-2.fc33.noarch 186/193 Verifying : systemd-udev-245.5-2.fc33.x86_64 187/193 Verifying : tbb-2020.2-2.fc33.x86_64 188/193 Verifying : tcl-1:8.6.10-2.fc33.x86_64 189/193 Verifying : tcsh-6.22.02-3.fc32.x86_64 190/193 Verifying : tk-1:8.6.10-3.fc32.x86_64 191/193 Verifying : ucx-1.6.1-2.fc32.x86_64 192/193 Verifying : xml-common-0.6.3-54.fc32.noarch 193/193 Installed: Lmod-8.3.12-1.fc33.x86_64 MUMPS-common-5.3.1-1.fc33.noarch MUMPS-mpich-5.3.1-1.fc33.x86_64 MUMPS-openmpi-5.3.1-1.fc33.x86_64 Random123-devel-1.13.2-2.fc33.x86_64 SuperLU-5.2.1-10.fc33.x86_64 acl-2.2.53-5.fc32.x86_64 annobin-9.21-1.fc33.x86_64 cgnslib-4.1.1-1.fc33.x86_64 cmake-3.17.2-1.fc33.x86_64 cmake-data-3.17.2-1.fc33.noarch cmake-filesystem-3.17.2-1.fc33.x86_64 cmake-rpm-macros-3.17.2-1.fc33.noarch cpp-10.1.1-1.fc33.x86_64 cryptsetup-libs-2.3.2-1.fc33.x86_64 dbus-1:1.12.16-5.fc33.x86_64 dbus-broker-23-2.fc33.x86_64 dbus-common-1:1.12.16-5.fc33.noarch dejavu-sans-fonts-2.37-12.fc33.noarch device-mapper-1.02.171-1.fc33.x86_64 device-mapper-libs-1.02.171-1.fc33.x86_64 dracut-050-26.git20200316.fc33.x86_64 emacs-filesystem-1:26.3-3.fc33.noarch fontconfig-2.13.92-11.fc33.x86_64 fonts-filesystem-3.0.3-1.fc33.noarch freetype-2.10.1-2.fc32.x86_64 gcc-10.1.1-1.fc33.x86_64 gcc-c++-10.1.1-1.fc33.x86_64 gcc-gfortran-10.1.1-1.fc33.x86_64 gdbm-libs-1:1.18.1-3.fc32.x86_64 git-core-2.26.2-1.fc33.x86_64 glibc-devel-2.31.9000-13.fc33.x86_64 glibc-headers-x86-2.31.9000-13.fc33.noarch gnutls-3.6.13-2.fc33.x86_64 gtest-1.10.0-1.fc33.x86_64 gtest-devel-1.10.0-1.fc33.x86_64 hdf5-1.10.5-6.fc32.x86_64 hdf5-mpich-1.10.5-6.fc32.x86_64 hdf5-openmpi-1.10.5-6.fc32.x86_64 hwdata-0.335-1.fc33.noarch hwloc-libs-2.0.4-3.fc32.x86_64 hypre-mpich-2.18.1-2.fc33.x86_64 hypre-openmpi-2.18.1-2.fc33.x86_64 infinipath-psm-3.3-26_g604758e_open.5.fc32.x86_64 iptables-libs-1.8.4-7.fc33.x86_64 isl-0.16.1-10.fc32.x86_64 json-c-0.14-3.fc33.x86_64 jsoncpp-1.9.2-2.fc33.x86_64 kbd-2.2.0-3.fc33.x86_64 kbd-legacy-2.2.0-3.fc33.noarch kbd-misc-2.2.0-3.fc33.noarch kernel-headers-5.7.0-0.rc5.git0.1.fc33.x86_64 kmod-27-2.fc33.x86_64 kmod-libs-27-2.fc33.x86_64 langpacks-core-font-en-3.0-3.fc33.noarch less-551-3.fc32.x86_64 libICE-1.0.10-3.fc32.x86_64 libSM-1.2.3-5.fc32.x86_64 libX11-1.6.9-3.fc32.x86_64 libX11-common-1.6.9-3.fc32.noarch libX11-xcb-1.6.9-3.fc32.x86_64 libXau-1.0.9-3.fc32.x86_64 libXdamage-1.1.5-2.fc32.x86_64 libXext-1.3.4-3.fc32.x86_64 libXfixes-5.0.3-11.fc32.x86_64 libXft-2.3.3-3.fc32.x86_64 libXmu-1.1.3-3.fc32.x86_64 libXrender-0.9.10-11.fc32.x86_64 libXt-1.2.0-1.fc32.x86_64 libXxf86vm-1.1.4-13.fc32.x86_64 libaec-1.0.4-3.fc32.x86_64 libargon2-20171227-4.fc32.x86_64 libcbor-0.5.0-7.fc33.x86_64 libdrm-2.4.101-1.fc33.x86_64 libedit-3.1-32.20191231cvs.fc32.x86_64 libevent-2.1.8-8.fc32.x86_64 libfabric-1.10.1-1.fc33.x86_64 libfido2-1.4.0-1.fc33.x86_64 libgfortran-10.1.1-1.fc33.x86_64 libglvnd-1:1.3.1-2.fc33.x86_64 libglvnd-glx-1:1.3.1-2.fc33.x86_64 libibumad-29.0-1.fc33.x86_64 libibverbs-29.0-1.fc33.x86_64 libkcapi-1.1.5-5.fc33.x86_64 libkcapi-hmaccalc-1.1.5-5.fc33.x86_64 libmnl-1.0.4-11.fc32.x86_64 libmpc-1.1.0-8.fc32.x86_64 libnetfilter_conntrack-1.0.7-4.fc32.x86_64 libnfnetlink-1.0.1-17.fc32.x86_64 libnl3-3.5.0-2.fc32.x86_64 libpcap-14:1.9.1-3.fc33.x86_64 libpciaccess-0.16-2.fc32.x86_64 libpng-2:1.6.37-3.fc32.x86_64 libpsm2-11.2.86-4.fc32.x86_64 libquadmath-10.1.1-1.fc33.x86_64 libquadmath-devel-10.1.1-1.fc33.x86_64 librdmacm-29.0-1.fc33.x86_64 libseccomp-2.4.2-3.fc32.x86_64 libstdc++-devel-10.1.1-1.fc33.x86_64 libuv-1:1.37.0-1.fc33.x86_64 libxcb-1.13.1-4.fc32.x86_64 libxcrypt-devel-4.4.16-3.fc33.x86_64 libxshmfence-1.3-6.fc32.x86_64 lua-5.3.5-7.fc32.x86_64 lua-filesystem-1.6.3-12.fc32.x86_64 lua-json-1.3.2-14.fc32.noarch lua-lpeg-1.0.2-2.fc32.x86_64 lua-posix-33.3.1-16.fc32.x86_64 lua-term-0.07-10.fc32.x86_64 mesa-libGL-20.0.7-1.fc33.x86_64 mesa-libGLU-9.0.1-2.fc32.x86_64 mesa-libglapi-20.0.7-1.fc33.x86_64 metis-5.1.0-24.fc32.x86_64 mpich-3.3.2-4.fc33.x86_64 mpich-devel-3.3.2-4.fc33.x86_64 munge-libs-0.5.13-7.fc32.x86_64 nettle-3.6-1.fc33.x86_64 numactl-libs-2.0.12-4.fc32.x86_64 openblas-0.3.9-2.fc33.x86_64 openblas-devel-0.3.9-2.fc33.x86_64 openblas-openmp-0.3.9-2.fc33.x86_64 openblas-openmp64-0.3.9-2.fc33.x86_64 openblas-openmp64_-0.3.9-2.fc33.x86_64 openblas-serial-0.3.9-2.fc33.x86_64 openblas-serial64-0.3.9-2.fc33.x86_64 openblas-serial64_-0.3.9-2.fc33.x86_64 openblas-threads-0.3.9-2.fc33.x86_64 openblas-threads64-0.3.9-2.fc33.x86_64 openblas-threads64_-0.3.9-2.fc33.x86_64 openmpi-4.0.4-0.1.rc1.fc33.x86_64 openmpi-devel-4.0.4-0.1.rc1.fc33.x86_64 opensm-libs-3.3.23-1.fc33.x86_64 openssh-8.2p1-3.fc33.x86_64 openssh-clients-8.2p1-3.fc33.x86_64 orangefs-2.9.7-8.fc33.x86_64 pciutils-3.6.4-1.fc33.x86_64 pciutils-libs-3.6.4-1.fc33.x86_64 perl-Carp-1.50-440.fc32.noarch perl-Errno-1.30-453.fc33.x86_64 perl-Exporter-5.74-2.fc32.noarch perl-PathTools-3.78-441.fc32.x86_64 perl-Scalar-List-Utils-3:1.55-441.fc33.x86_64 perl-constant-1.33-441.fc32.noarch perl-interpreter-4:5.30.2-453.fc33.x86_64 perl-libs-4:5.30.2-453.fc33.x86_64 perl-macros-4:5.30.2-453.fc33.noarch petsc-3.13.1-2.fc33.x86_64 petsc-devel-3.13.1-2.fc33.x86_64 petsc-mpich-3.13.1-2.fc33.x86_64 petsc-mpich-devel-3.13.1-2.fc33.x86_64 petsc-openmpi-3.13.1-2.fc33.x86_64 petsc-openmpi-devel-3.13.1-2.fc33.x86_64 pmix-3.1.5-1.fc33.x86_64 procps-ng-3.3.15-7.fc32.x86_64 ptscotch-mpich-6.0.9-2.fc32.x86_64 ptscotch-openmpi-6.0.9-2.fc32.x86_64 python-pip-wheel-20.0.2-4.fc33.noarch python-rpm-macros-3.8-7.fc33.noarch python-setuptools-wheel-46.2.0-1.fc33.noarch python3-3.8.3~rc1-1.fc33.x86_64 python3-Cython-3.0~a3-2.fc33.x86_64 python3-devel-3.8.3~rc1-1.fc33.x86_64 python3-libs-3.8.3~rc1-1.fc33.x86_64 python3-numpy-1:1.18.4-2.fc33.x86_64 python3-rpm-generators-11-6.fc33.noarch python3-rpm-macros-3.8-7.fc33.noarch python3-setuptools-46.2.0-1.fc33.noarch qrencode-libs-4.0.2-5.fc32.x86_64 rdma-core-29.0-1.fc33.x86_64 rhash-1.3.8-3.fc32.x86_64 rpm-mpi-hooks-6-5.fc32.noarch scalapack-common-2.1.0-2.fc32.x86_64 scalapack-mpich-2.1.0-2.fc32.x86_64 scalapack-openmpi-2.1.0-2.fc32.x86_64 scotch-6.0.9-2.fc32.x86_64 suitesparse-5.4.0-3.fc32.x86_64 suitesparse64-5.4.0-3.fc32.x86_64 sundials-mpich-5.2.0-3.fc33.x86_64 sundials-mpich-devel-5.2.0-3.fc33.x86_64 sundials-openmpi-5.2.0-3.fc33.x86_64 sundials-openmpi-devel-5.2.0-3.fc33.x86_64 superlu_dist-mpich-1:6.1.1-3.fc33.x86_64 superlu_dist-openmpi-1:6.1.1-3.fc33.x86_64 systemd-245.5-2.fc33.x86_64 systemd-pam-245.5-2.fc33.x86_64 systemd-rpm-macros-245.5-2.fc33.noarch systemd-udev-245.5-2.fc33.x86_64 tbb-2020.2-2.fc33.x86_64 tcl-1:8.6.10-2.fc33.x86_64 tcsh-6.22.02-3.fc32.x86_64 tk-1:8.6.10-3.fc32.x86_64 ucx-1.6.1-2.fc32.x86_64 xml-common-0.6.3-54.fc32.noarch Complete! Finish: build setup for python-steps-3.5.0-1.fc33.src.rpm Start: rpmbuild python-steps-3.5.0-1.fc33.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1585958400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Z3Qznu + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf STEPS-3.5.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/steps-3.5.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd STEPS-3.5.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '<rpm-build>' + /usr/bin/git add . + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build <rpm-build>' -m 'python-steps-3.5.0 base' + /usr/bin/cat /builddir/build/SOURCES/0001-Unbundle-gtest.patch + /usr/bin/git apply --index --reject - Checking patch test/CMakeLists.txt... Applied patch test/CMakeLists.txt cleanly. + /usr/bin/git commit -q -m 0001-Unbundle-gtest.patch --author 'rpm-build <rpm-build>' + /usr/bin/cat /builddir/build/SOURCES/0003-Remove-flags-set-by-project.patch + /usr/bin/git apply --index --reject - Checking patch CMakeLists.txt... Applied patch CMakeLists.txt cleanly. + /usr/bin/git commit -q -m 0003-Remove-flags-set-by-project.patch --author 'rpm-build <rpm-build>' + /usr/bin/cat /builddir/build/SOURCES/0004-Remove-pysteps-flags.patch + /usr/bin/git apply --index --reject - Checking patch pysteps/CMakeLists.txt... Applied patch pysteps/CMakeLists.txt cleanly. + /usr/bin/git commit -q -m 0004-Remove-pysteps-flags.patch --author 'rpm-build <rpm-build>' + /usr/bin/cat /builddir/build/SOURCES/0005-Disable-pyinstall.patch + /usr/bin/git apply --index --reject - Checking patch pysteps/CMakeLists.txt... Applied patch pysteps/CMakeLists.txt cleanly. + /usr/bin/git commit -q -m 0005-Disable-pyinstall.patch --author 'rpm-build <rpm-build>' + mkdir -pv src/third_party/easyloggingpp/src/ mkdir: created directory 'src/third_party/easyloggingpp/src/' + cp /builddir/build/SOURCES/easylogging++.cc src/third_party/easyloggingpp/src/ -v '/builddir/build/SOURCES/easylogging++.cc' -> 'src/third_party/easyloggingpp/src/easylogging++.cc' + cp /builddir/build/SOURCES/easylogging++.h src/third_party/easyloggingpp/src/ -v '/builddir/build/SOURCES/easylogging++.h' -> 'src/third_party/easyloggingpp/src/easylogging++.h' + mkdir build + mkdir build-openmpi + mkdir build-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ICw5Zw + umask 022 + cd /builddir/build/BUILD *** BUILDING steps-3.5.0 *** + cd STEPS-3.5.0 + export MPI_COMPILE_TYPE= + MPI_COMPILE_TYPE= + export MPI_COMPILER=serial + MPI_COMPILER=serial + export MPI_SUFFIX= + MPI_SUFFIX= + export MPI_HOME=/usr + MPI_HOME=/usr + export MPI_BIN=/usr/bin + MPI_BIN=/usr/bin + export MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages + export MPI_YES=False + MPI_YES=False + echo + echo '*** BUILDING steps-3.5.0 ***' + echo + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS ~/build/BUILD/STEPS-3.5.0/build ~/build/BUILD/STEPS-3.5.0 + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + pushd build + cmake -DUSE_BUNDLE_EASYLOGGINGPP:BOOLEAN=ON -DUSE_BUNDLE_RANDOM123:BOOLEAN=OFF -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DPYTHON_INSTALL_PREFIX:PATH=/usr/lib64/python3.8/site-packages -DCMAKE_SKIP_RPATH:BOOL=ON -DUSE_MPI:BOOL=False -DUSE_PETSC:BOOL=False -DCMAKE_INSTALL_PREFIX:PATH=/usr -DBUILD_SHARED_LIBS:BOOL=ON -DLIB_SUFFIX=64 ../ -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Random123:/usr/include -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX14 -- Performing Test COMPILER_SUPPORTS_CXX14 - Success -- Performing Test COMPILER_SUPPORTS_CXX17 -- Performing Test COMPILER_SUPPORTS_CXX17 - Success -- Looking for strip utility -- Looking for strip utility - found -- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.3") -- Found PythonInterpLibs: /usr/lib64/libpython3.8.so -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- PYTHON packages being installed to /usr/lib64/python3.8/site-packages. To change use -DPYTHON_INSTALL_PREFIX=<dir> -- Found Cython: /usr/bin/cython (found suitable version "3.0", minimum required is "0.25.1") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/STEPS-3.5.0/build + popd ~/build/BUILD/STEPS-3.5.0 + make -j2 -C build make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/src /builddir/build/BUILD/STEPS-3.5.0/build/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= Scanning dependencies of target libsteps-obj make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/error.cpp.o [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/init.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ 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-std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tmpatch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.cpp [ 7%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/sdiffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem 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-isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/memb.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/memb.cpp [ 8%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/diffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 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src/CMakeFiles/libsteps-obj.dir/steps/model/diff.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/model/diff.cpp.o -c 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src/CMakeFiles/libsteps-obj.dir/steps/tetode/tri.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetode/tri.cpp.o -c 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src/CMakeFiles/libsteps-obj.dir/steps/solver/api_diffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/api_diffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/api_diffboundary.cpp [ 29%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/api_recording.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/reacdef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/reacdef.cpp [ 34%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/specdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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-Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/chandef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/chandef.cpp [ 37%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/ghkcurrdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/solver/vdepsreacdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/vdepsreacdef.cpp.o 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-Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/comp.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/comp.cpp [ 47%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/diff.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/tetexact/sreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/sreac.cpp.o -c 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src/CMakeFiles/libsteps-obj.dir/steps/tetexact/sdiffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/sdiffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/sdiffboundary.cpp [ 57%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/comp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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src/CMakeFiles/libsteps-obj.dir/third_party/easyloggingpp/src/easylogging++.cc.o cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/c++ -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -Wno-double-promotion -Wno-shadow 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CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_dense.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_direct.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_iterative.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_math.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_nvector.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_spbcgs.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_spgmr.cpp.o CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/sundials/sundials_sptfqmr.cpp.o CMakeFiles/libsteps-obj.dir/steps/solver/efield/bdsystem_lapack.cpp.o /usr/bin/ranlib libsteps.a make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 86%] Built target libsteps_static cd /builddir/build/BUILD/STEPS-3.5.0/build/src && /usr/bin/cmake -E cmake_symlink_library libsteps.so.3.5.0 libsteps.so.3.5 libsteps.so make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 86%] Built target libsteps make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/depend make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_point3d.dir/DependInfo.cmake --color= [ 86%] Cythonizing extension cysteps.pyx cd /builddir/build/BUILD/STEPS-3.5.0/pysteps && /usr/bin/cython --fast-fail --cplus -I /builddir/build/BUILD/STEPS-3.5.0/src --output-file /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp cysteps.pyx Scanning dependencies of target test_point3d make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 87%] Building CXX object test/unit/cpp/CMakeFiles/test_point3d.dir/test_point3d.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_point3d.dir/test_point3d.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_point3d.cpp [ 87%] Linking CXX executable test_point3d cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_point3d.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_point3d.dir/test_point3d.cpp.o -o test_point3d -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 87%] Built target test_point3d make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= Scanning dependencies of target test_rng make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 88%] Building CXX object test/unit/cpp/CMakeFiles/test_rng.dir/test_rng.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_rng.dir/test_rng.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp: In function 'void binomial_check(const string&, uint, double, uint, double, uint, double)': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:57:16: warning: unused variable 'n_dof' [-Wunused-variable] 57 | const uint n_dof = n_sample - 1; | ^~~~~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:80:29: warning: variable 'qpair' set but not used [-Wunused-but-set-variable] 80 | std::pair<double, uint> qpair = std::make_pair(level_confidence, n_sample-1); | ^~~~~ [ 89%] Linking CXX executable test_rng cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rng.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_rng.dir/test_rng.cpp.o -o test_rng -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 89%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= Scanning dependencies of target test_bbox make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 90%] Building CXX object test/unit/cpp/CMakeFiles/test_bbox.dir/test_bbox.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bbox.dir/test_bbox.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bbox.cpp cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/pysteps /builddir/build/BUILD/STEPS-3.5.0/build/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= Scanning dependencies of target cysteps make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 91%] Building CXX object pysteps/CMakeFiles/cysteps.dir/steps/cysteps.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/pysteps && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -Dcysteps_EXPORTS -I/usr/include/python3.8 -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/cysteps.dir/steps/cysteps.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp [ 91%] Linking CXX executable test_bbox cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bbox.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bbox.dir/test_bbox.cpp.o -o test_bbox -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 91%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= Scanning dependencies of target test_tetmesh make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 92%] Building CXX object test/unit/cpp/CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_tetmesh.cpp /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp: In function 'PyObject* __pyx_pf_7cysteps_11_py_Tetmesh_102removeROI(__pyx_obj_7cysteps__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:47215:164: warning: 'void steps::tetmesh::Tetmesh::removeROI(const string&)' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 47215 | ((struct __pyx_vtabstruct_7cysteps__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->removeROI(__pyx_f_7cysteps_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:586:10: note: declared here 586 | void removeROI(std::string const &id); | ^~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp: In function 'PyObject* __pyx_pf_7cysteps_11_py_Tetmesh_106getROIType(__pyx_obj_7cysteps__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:47435:177: warning: 'steps::tetmesh::ElementType steps::tetmesh::Tetmesh::getROIType(const string&) const' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 47435 | __pyx_t_1 = ((struct __pyx_vtabstruct_7cysteps__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIType(__pyx_f_7cysteps_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:594:17: note: declared here 594 | ElementType getROIType(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp: In function 'PyObject* __pyx_pf_7cysteps_11_py_Tetmesh_108getROIData(__pyx_obj_7cysteps__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:47510:177: warning: 'steps::tetmesh::ROISet::vector_data_type steps::tetmesh::Tetmesh::getROIData(const string&) const' is deprecated: type should be specified when retrieving a ROI [-Wdeprecated-declarations] 47510 | __pyx_t_1 = ((struct __pyx_vtabstruct_7cysteps__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIData(__pyx_f_7cysteps_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:598:30: note: declared here 598 | ROISet::vector_data_type getROIData(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp: In function 'PyObject* __pyx_pf_7cysteps_11_py_Tetmesh_110getROIDataSize(__pyx_obj_7cysteps__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:47585:181: warning: 'uint steps::tetmesh::Tetmesh::getROIDataSize(const string&) const' is deprecated: usage lead to bad pattern [-Wdeprecated-declarations] 47585 | __pyx_t_1 = ((struct __pyx_vtabstruct_7cysteps__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIDataSize(__pyx_f_7cysteps_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:603:10: note: declared here 603 | uint getROIDataSize(std::string const &id) const; | ^~~~~~~~~~~~~~ [ 93%] Linking CXX executable test_tetmesh cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetmesh.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -o test_tetmesh -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 93%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= Scanning dependencies of target test_membership make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 93%] Building CXX object test/unit/cpp/CMakeFiles/test_membership.dir/test_membership.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_membership.dir/test_membership.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_membership.cpp [ 94%] Linking CXX executable test_membership cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_membership.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_membership.dir/test_membership.cpp.o -o test_membership -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 94%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= Scanning dependencies of target test_sample make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 94%] Building CXX object test/unit/cpp/CMakeFiles/test_sample.dir/test_sample.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_sample.dir/test_sample.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_sample.cpp [ 95%] Linking CXX executable test_sample cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sample.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sample.dir/test_sample.cpp.o -o test_sample -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 95%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= Scanning dependencies of target test_small_binomial make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 96%] Building CXX object test/unit/cpp/CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_small_binomial.cpp [ 96%] Linking CXX executable test_small_binomial cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_small_binomial.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -o test_small_binomial -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 96%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= Scanning dependencies of target test_checkid make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 97%] Building CXX object test/unit/cpp/CMakeFiles/test_checkid.dir/test_checkid.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_checkid.dir/test_checkid.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_checkid.cpp [ 98%] Linking CXX executable test_checkid cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_checkid.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_checkid.dir/test_checkid.cpp.o -o test_checkid -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 98%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= Scanning dependencies of target test_bdsystem make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 99%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ [100%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/c++ -DGNU_FORCE_INLINE=[[gnu::always_inline]] -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/lapack_common.cpp [100%] Linking CXX executable test_bdsystem cd /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bdsystem.dir/link.txt --verbose=1 /usr/bin/c++ -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -o test_bdsystem -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [100%] Built target test_bdsystem /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp: In function 'int __pyx_pymod_exec_cysteps(PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps.cpp:120421:32: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without 120421 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_cysteps(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX shared module ../lib/steps/cysteps.so cd /builddir/build/BUILD/STEPS-3.5.0/build/pysteps && /usr/bin/cmake -E cmake_link_script CMakeFiles/cysteps.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib/steps/cysteps.so CMakeFiles/cysteps.dir/steps/cysteps.cpp.o ../src/libsteps.a -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [100%] Built target cysteps make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build/pysteps/build/ running build running build_py creating ../build/pysteps/build creating ../build/pysteps/build/lib creating ../build/pysteps/build/lib/steps copying steps/solver.py -> ../build/pysteps/build/lib/steps copying steps/rng.py -> ../build/pysteps/build/lib/steps copying steps/quiet.py -> ../build/pysteps/build/lib/steps copying steps/model.py -> ../build/pysteps/build/lib/steps copying steps/geom.py -> ../build/pysteps/build/lib/steps copying steps/__init__.py -> ../build/pysteps/build/lib/steps creating ../build/pysteps/build/lib/steps/visual copying steps/visual/__init__.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/StaticComponent.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/SimDisplay.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/Plotting.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/PartitionViewer.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/DynamicComponent.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/Control.py -> ../build/pysteps/build/lib/steps/visual copying steps/visual/Colors.py -> ../build/pysteps/build/lib/steps/visual creating ../build/pysteps/build/lib/steps/utilities copying steps/utilities/steps_shadow.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/steps_cubit.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/sbml.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/morph_support.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/metis_support.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/meshio.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/meshctrl.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/geom_decompose.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/cubit_support.py -> ../build/pysteps/build/lib/steps/utilities copying steps/utilities/__init__.py -> ../build/pysteps/build/lib/steps/utilities creating ../build/pysteps/build/lib/steps/mpi copying steps/mpi/solver.py -> ../build/pysteps/build/lib/steps/mpi copying steps/mpi/__init__.py -> ../build/pysteps/build/lib/steps/mpi creating ../build/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/simulate.py -> ../build/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/matlab_parser.py -> ../build/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/event_parser.py -> ../build/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/__init__.py -> ../build/pysteps/build/lib/steps/utilities/matlab_support + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 75 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' *** BUILDING steps-3.5.0-mpich *** ~/build/BUILD/STEPS-3.5.0/build-mpich ~/build/BUILD/STEPS-3.5.0 ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + export FC=mpif90 + FC=mpif90 + export F77=mpif77 + F77=mpif77 + export MPI_YES=True + MPI_YES=True + export MPI_COMPILE_TYPE=-mpich + MPI_COMPILE_TYPE=-mpich + echo + echo '*** BUILDING steps-3.5.0-mpich ***' + echo + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + pushd build-mpich + cmake -DUSE_BUNDLE_EASYLOGGINGPP:BOOLEAN=ON -DUSE_BUNDLE_RANDOM123:BOOLEAN=OFF -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DPYTHON_INSTALL_PREFIX:PATH=/usr/lib64/python3.8/site-packages/mpich -DCMAKE_SKIP_RPATH:BOOL=ON -DUSE_MPI:BOOL=True -DUSE_PETSC:BOOL=False -DCMAKE_INSTALL_PREFIX:PATH=/usr/lib64/mpich -DBUILD_SHARED_LIBS:BOOL=ON -DLIB_SUFFIX=64 ../ -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Random123:/usr/include -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX14 -- Performing Test COMPILER_SUPPORTS_CXX14 - Success -- Performing Test COMPILER_SUPPORTS_CXX17 -- Performing Test COMPILER_SUPPORTS_CXX17 - Success -- Looking for strip utility -- Looking for strip utility - found -- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.3") -- Found PythonInterpLibs: /usr/lib64/libpython3.8.so -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found MPI_C: /usr/lib64/mpich/bin/mpicc (found version "3.1") -- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- PYTHON packages being installed to /usr/lib64/python3.8/site-packages/mpich. To change use -DPYTHON_INSTALL_PREFIX=<dir> -- Found Cython: /usr/bin/cython (found suitable version "3.0", minimum required is "0.25.1") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/STEPS-3.5.0/build-mpich + popd ~/build/BUILD/STEPS-3.5.0 + make -j2 -C build-mpich make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build-mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= Scanning dependencies of target libsteps-obj make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/init.cpp.o [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/error.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/init.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/init.cpp cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/error.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/error.cpp [ 2%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/finish.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.cpp [ 3%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/comp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/comp.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/comp.cpp [ 3%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/geom.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/geom.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/geom.cpp [ 4%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/patch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/patch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/patch.cpp [ 5%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/tmcomp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tmcomp.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmcomp.cpp [ 5%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/tmpatch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tmpatch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.cpp [ 6%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/sdiffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/sdiffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/sdiffboundary.cpp [ 6%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/memb.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/memb.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/memb.cpp [ 7%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/diffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/diffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/diffboundary.cpp [ 8%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/model/model.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/model/model.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/model/model.cpp [ 8%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/model/diff.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/model/diff.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/model/diff.cpp [ 9%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/model/chan.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/model/sreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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src/CMakeFiles/libsteps-obj.dir/steps/tetode/tet.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetode/tet.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetode/tet.cpp [ 20%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetode/tri.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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-Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/api_diffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/api_diffboundary.cpp [ 26%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/api_recording.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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-Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/api_sdiffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/api_sdiffboundary.cpp [ 30%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/reacdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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object src/CMakeFiles/libsteps-obj.dir/steps/solver/chandef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/chandef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/chandef.cpp [ 33%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/ghkcurrdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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-fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/diffboundarydef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/diffboundarydef.cpp [ 34%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/ohmiccurrdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/solver/efield/vertexconnection.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/efield/vertexconnection.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/efield/vertexconnection.cpp [ 40%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/efield/vertexelement.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/efield/vertexelement.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/efield/vertexelement.cpp [ 41%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/comp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security 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src/CMakeFiles/libsteps-obj.dir/steps/tetexact/reac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/reac.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/reac.cpp [ 45%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/sreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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-Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/tetexact.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/tetexact.cpp [ 46%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/tri.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/tetexact/vdepsreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/vdepsreac.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/vdepsreac.cpp [ 49%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/diffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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-fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/wmvol.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/wmvol.cpp [ 50%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/sdiffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/reac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/wmdirect/reac.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/wmdirect/reac.cpp [ 53%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/sreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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-isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/rng/rng.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/rng/rng.cpp [ 55%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/rng/mt19937.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/wmrssa/patch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/wmrssa/patch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/wmrssa/patch.cpp [ 58%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmrssa/reac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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src/CMakeFiles/libsteps-obj.dir/third_party/easyloggingpp/src/easylogging++.cc.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC 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src/CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/cvode/cvode_dense.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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src/CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/nvec_ser/fnvector_serial.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/lib64/mpich/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sdiff.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/kproc.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/patch.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/reac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sreac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tet.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tetopsplit.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tri.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/ghkcurr.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/vdeptrans.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/vdepsreac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/diffboundary.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/wmvol.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sdiffboundary.cpp.o /usr/bin/ranlib libsteps.a make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 87%] Built target libsteps_static cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src && /usr/bin/cmake -E cmake_symlink_library libsteps.so.3.5.0 libsteps.so.3.5 libsteps.so make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 87%] Built target libsteps make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/depend make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp 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/builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= Scanning dependencies of target test_rng make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 88%] Building CXX object test/unit/cpp/CMakeFiles/test_rng.dir/test_rng.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_rng.dir/test_rng.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp: In function 'void binomial_check(const string&, uint, double, uint, double, uint, double)': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:57:16: warning: unused variable 'n_dof' [-Wunused-variable] 57 | const uint n_dof = n_sample - 1; | ^~~~~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:80:29: warning: variable 'qpair' set but not used [-Wunused-but-set-variable] 80 | std::pair<double, uint> qpair = std::make_pair(level_confidence, n_sample-1); | ^~~~~ [ 89%] Linking CXX executable test_rng cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rng.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_rng.dir/test_rng.cpp.o -o test_rng -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 89%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= Scanning dependencies of target test_bbox make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 90%] Building CXX object test/unit/cpp/CMakeFiles/test_bbox.dir/test_bbox.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bbox.dir/test_bbox.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bbox.cpp cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= Scanning dependencies of target cysteps make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 91%] Building CXX object pysteps/CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -Dcysteps_EXPORTS -I/usr/include/python3.8 -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp [ 92%] Linking CXX executable test_bbox cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bbox.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bbox.dir/test_bbox.cpp.o -o test_bbox -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 92%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= Scanning dependencies of target test_tetmesh make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 93%] Building CXX object test/unit/cpp/CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_tetmesh.cpp /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_102removeROI(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48769:174: warning: 'void steps::tetmesh::Tetmesh::removeROI(const string&)' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48769 | ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->removeROI(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:586:10: note: declared here 586 | void removeROI(std::string const &id); | ^~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_106getROIType(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48989:187: warning: 'steps::tetmesh::ElementType steps::tetmesh::Tetmesh::getROIType(const string&) const' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48989 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIType(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:594:17: note: declared here 594 | ElementType getROIType(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_108getROIData(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49064:187: warning: 'steps::tetmesh::ROISet::vector_data_type steps::tetmesh::Tetmesh::getROIData(const string&) const' is deprecated: type should be specified when retrieving a ROI [-Wdeprecated-declarations] 49064 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIData(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:598:30: note: declared here 598 | ROISet::vector_data_type getROIData(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_110getROIDataSize(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49139:191: warning: 'uint steps::tetmesh::Tetmesh::getROIDataSize(const string&) const' is deprecated: usage lead to bad pattern [-Wdeprecated-declarations] 49139 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIDataSize(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:603:10: note: declared here 603 | uint getROIDataSize(std::string const &id) const; | ^~~~~~~~~~~~~~ [ 94%] Linking CXX executable test_tetmesh cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetmesh.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -o test_tetmesh -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 94%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= Scanning dependencies of target test_membership make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 95%] Building CXX object test/unit/cpp/CMakeFiles/test_membership.dir/test_membership.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_membership.dir/test_membership.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_membership.cpp [ 96%] Linking CXX executable test_membership cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_membership.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_membership.dir/test_membership.cpp.o -o test_membership -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 96%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= Scanning dependencies of target test_sample make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 97%] Building CXX object test/unit/cpp/CMakeFiles/test_sample.dir/test_sample.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_sample.dir/test_sample.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_sample.cpp [ 97%] Linking CXX executable test_sample cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sample.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sample.dir/test_sample.cpp.o -o test_sample -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 97%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= Scanning dependencies of target test_small_binomial make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 98%] Building CXX object test/unit/cpp/CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_small_binomial.cpp [ 98%] Linking CXX executable test_small_binomial cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_small_binomial.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -o test_small_binomial -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 98%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= Scanning dependencies of target test_checkid make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 99%] Building CXX object test/unit/cpp/CMakeFiles/test_checkid.dir/test_checkid.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_checkid.dir/test_checkid.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_checkid.cpp [ 99%] Linking CXX executable test_checkid cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_checkid.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_checkid.dir/test_checkid.cpp.o -o test_checkid -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 99%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= Scanning dependencies of target test_bdsystem make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 99%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ [100%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/lapack_common.cpp [100%] Linking CXX executable test_bdsystem cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bdsystem.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -o test_bdsystem -lpthread -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [100%] Built target test_bdsystem /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'int __pyx_pymod_exec_cysteps_mpi(PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:132735:32: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without 132735 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_cysteps_mpi(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX shared module ../lib/steps/cysteps_mpi.so cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps && /usr/bin/cmake -E cmake_link_script CMakeFiles/cysteps.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib/steps/cysteps_mpi.so CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o ../src/libsteps.a -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [100%] Built target cysteps make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build-mpich/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build-mpich/pysteps/build/ running build running build_py creating ../build-mpich/pysteps/build creating ../build-mpich/pysteps/build/lib creating ../build-mpich/pysteps/build/lib/steps copying steps/solver.py -> ../build-mpich/pysteps/build/lib/steps copying steps/rng.py -> ../build-mpich/pysteps/build/lib/steps copying steps/quiet.py -> ../build-mpich/pysteps/build/lib/steps copying steps/model.py -> ../build-mpich/pysteps/build/lib/steps copying steps/geom.py -> ../build-mpich/pysteps/build/lib/steps copying steps/__init__.py -> ../build-mpich/pysteps/build/lib/steps creating ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/__init__.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/StaticComponent.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/SimDisplay.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/Plotting.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/PartitionViewer.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/DynamicComponent.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/Control.py -> ../build-mpich/pysteps/build/lib/steps/visual copying steps/visual/Colors.py -> ../build-mpich/pysteps/build/lib/steps/visual creating ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/steps_shadow.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/steps_cubit.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/sbml.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/morph_support.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/metis_support.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/meshio.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/meshctrl.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/geom_decompose.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/cubit_support.py -> ../build-mpich/pysteps/build/lib/steps/utilities copying steps/utilities/__init__.py -> ../build-mpich/pysteps/build/lib/steps/utilities creating ../build-mpich/pysteps/build/lib/steps/mpi copying steps/mpi/solver.py -> ../build-mpich/pysteps/build/lib/steps/mpi copying steps/mpi/__init__.py -> ../build-mpich/pysteps/build/lib/steps/mpi creating ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/simulate.py -> ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/matlab_parser.py -> ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/event_parser.py -> ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/__init__.py -> ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 75 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 75 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX *** BUILDING steps-3.5.0-openmpi *** ~/build/BUILD/STEPS-3.5.0/build-openmpi ~/build/BUILD/STEPS-3.5.0 ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + export FC=mpif90 + FC=mpif90 + export F77=mpif77 + F77=mpif77 + export MPI_YES=True + MPI_YES=True + export MPI_COMPILE_TYPE=-openmpi + MPI_COMPILE_TYPE=-openmpi + echo + echo '*** BUILDING steps-3.5.0-openmpi ***' + echo + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + pushd build-openmpi + cmake -DUSE_BUNDLE_EASYLOGGINGPP:BOOLEAN=ON -DUSE_BUNDLE_RANDOM123:BOOLEAN=OFF -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DPYTHON_INSTALL_PREFIX:PATH=/usr/lib64/python3.8/site-packages/openmpi -DCMAKE_SKIP_RPATH:BOOL=ON -DUSE_MPI:BOOL=True -DUSE_PETSC:BOOL=False -DCMAKE_INSTALL_PREFIX:PATH=/usr/lib64/openmpi -DBUILD_SHARED_LIBS:BOOL=ON -DLIB_SUFFIX=64 ../ -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Random123:/usr/include -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX14 -- Performing Test COMPILER_SUPPORTS_CXX14 - Success -- Performing Test COMPILER_SUPPORTS_CXX17 -- Performing Test COMPILER_SUPPORTS_CXX17 - Success -- Looking for strip utility -- Looking for strip utility - found -- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.3") -- Found PythonInterpLibs: /usr/lib64/libpython3.8.so -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found MPI_C: /usr/lib64/openmpi/bin/mpicc (found version "3.1") -- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- PYTHON packages being installed to /usr/lib64/python3.8/site-packages/openmpi. To change use -DPYTHON_INSTALL_PREFIX=<dir> -- Found Cython: /usr/bin/cython (found suitable version "3.0", minimum required is "0.25.1") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/STEPS-3.5.0/build-openmpi + popd ~/build/BUILD/STEPS-3.5.0 + make -j2 -C build-openmpi make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build-openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= Scanning dependencies of target libsteps-obj make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/init.cpp.o [ 1%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/error.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/init.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/init.cpp cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/error.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/error.cpp [ 2%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/finish.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.cpp [ 3%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/comp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/comp.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/comp.cpp [ 3%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/geom.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/geom.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/geom.cpp [ 4%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/patch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/patch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/patch.cpp [ 5%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/tmcomp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/tmcomp.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmcomp.cpp [ 5%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/tmpatch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && 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src/CMakeFiles/libsteps-obj.dir/steps/geom/sdiffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/geom/sdiffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/sdiffboundary.cpp [ 6%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/geom/memb.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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object src/CMakeFiles/libsteps-obj.dir/steps/model/vdepsreac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/model/vdepsreac.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/model/vdepsreac.cpp [ 15%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/math/tetrahedron.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/api_tet.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/api_tet.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/api_tet.cpp [ 24%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/api_vert.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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src/CMakeFiles/libsteps-obj.dir/steps/solver/compdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/ghkcurrdef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/ghkcurrdef.cpp [ 33%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/diffboundarydef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/diffboundarydef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/diffboundarydef.cpp [ 34%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/ohmiccurrdef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem 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src/CMakeFiles/libsteps-obj.dir/steps/solver/sdiffboundarydef.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/sdiffboundarydef.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/sdiffboundarydef.cpp [ 36%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/efield/dVsolver.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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src/CMakeFiles/libsteps-obj.dir/steps/solver/efield/tetmesh.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/solver/efield/tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/solver/efield/tetmesh.cpp [ 40%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/solver/efield/vertexconnection.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/vdepsreac.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/vdepsreac.cpp [ 49%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/tetexact/diffboundary.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall 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-I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/tetexact/sdiffboundary.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/tetexact/sdiffboundary.cpp [ 50%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/comp.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx 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src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/kproc.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/wmdirect/kproc.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/wmdirect/kproc.cpp [ 52%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmdirect/patch.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 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-Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/libsteps-obj.dir/steps/wmrssa/patch.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/src/steps/wmrssa/patch.cpp [ 58%] Building CXX object src/CMakeFiles/libsteps-obj.dir/steps/wmrssa/reac.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem 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src/CMakeFiles/libsteps-obj.dir/third_party/cvode-2.6.0/src/cvode/cvode_io.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src && /usr/lib64/openmpi/bin/mpicxx -DELPP_DISABLE_DEFAULT_CRASH_HANDLING=1 -DELPP_NO_DEFAULT_LOG_FILE=1 -DELPP_STL_LOGGING=1 -DENABLE_ASSERTLOG=1 -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src/. -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o 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CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sdiff.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/kproc.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/patch.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/reac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sreac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tet.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tetopsplit.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/tri.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/ghkcurr.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/vdeptrans.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/vdepsreac.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/diffboundary.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/wmvol.cpp.o CMakeFiles/libsteps-obj.dir/steps/mpi/tetopsplit/sdiffboundary.cpp.o /usr/bin/ranlib libsteps.a make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 87%] Built 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/builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_point3d.dir/test_point3d.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_point3d.cpp [ 88%] Linking CXX executable test_point3d cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_point3d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_point3d.dir/test_point3d.cpp.o -o test_point3d -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 88%] Built target test_point3d make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= Scanning dependencies of target test_rng make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 88%] Building CXX object test/unit/cpp/CMakeFiles/test_rng.dir/test_rng.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_rng.dir/test_rng.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp: In function 'void binomial_check(const string&, uint, double, uint, double, uint, double)': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:57:16: warning: unused variable 'n_dof' [-Wunused-variable] 57 | const uint n_dof = n_sample - 1; | ^~~~~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_rng.cpp:80:29: warning: variable 'qpair' set but not used [-Wunused-but-set-variable] 80 | std::pair<double, uint> qpair = std::make_pair(level_confidence, n_sample-1); | ^~~~~ [ 89%] Linking CXX executable test_rng cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rng.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_rng.dir/test_rng.cpp.o -o test_rng -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 89%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= Scanning dependencies of target test_bbox make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 90%] Building CXX object test/unit/cpp/CMakeFiles/test_bbox.dir/test_bbox.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bbox.dir/test_bbox.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bbox.cpp cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= Scanning dependencies of target cysteps make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 91%] Building CXX object pysteps/CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -Dcysteps_EXPORTS -I/usr/include/python3.8 -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp [ 92%] Linking CXX executable test_bbox cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bbox.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bbox.dir/test_bbox.cpp.o -o test_bbox -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 92%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= Scanning dependencies of target test_tetmesh make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 93%] Building CXX object test/unit/cpp/CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_tetmesh.cpp /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_102removeROI(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48769:174: warning: 'void steps::tetmesh::Tetmesh::removeROI(const string&)' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48769 | ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->removeROI(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:586:10: note: declared here 586 | void removeROI(std::string const &id); | ^~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_106getROIType(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48989:187: warning: 'steps::tetmesh::ElementType steps::tetmesh::Tetmesh::getROIType(const string&) const' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48989 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIType(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:594:17: note: declared here 594 | ElementType getROIType(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_108getROIData(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49064:187: warning: 'steps::tetmesh::ROISet::vector_data_type steps::tetmesh::Tetmesh::getROIData(const string&) const' is deprecated: type should be specified when retrieving a ROI [-Wdeprecated-declarations] 49064 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIData(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:598:30: note: declared here 598 | ROISet::vector_data_type getROIData(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_110getROIDataSize(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49139:191: warning: 'uint steps::tetmesh::Tetmesh::getROIDataSize(const string&) const' is deprecated: usage lead to bad pattern [-Wdeprecated-declarations] 49139 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIDataSize(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:603:10: note: declared here 603 | uint getROIDataSize(std::string const &id) const; | ^~~~~~~~~~~~~~ [ 94%] Linking CXX executable test_tetmesh cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetmesh.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_tetmesh.dir/test_tetmesh.cpp.o -o test_tetmesh -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 94%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= Scanning dependencies of target test_membership make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 95%] Building CXX object test/unit/cpp/CMakeFiles/test_membership.dir/test_membership.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_membership.dir/test_membership.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_membership.cpp [ 96%] Linking CXX executable test_membership cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_membership.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_membership.dir/test_membership.cpp.o -o test_membership -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 96%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= Scanning dependencies of target test_sample make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 97%] Building CXX object test/unit/cpp/CMakeFiles/test_sample.dir/test_sample.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_sample.dir/test_sample.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_sample.cpp [ 97%] Linking CXX executable test_sample cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sample.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_sample.dir/test_sample.cpp.o -o test_sample -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 97%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= Scanning dependencies of target test_small_binomial make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 98%] Building CXX object test/unit/cpp/CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_small_binomial.cpp [ 98%] Linking CXX executable test_small_binomial cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_small_binomial.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_small_binomial.dir/test_small_binomial.cpp.o -o test_small_binomial -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 98%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= Scanning dependencies of target test_checkid make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 99%] Building CXX object test/unit/cpp/CMakeFiles/test_checkid.dir/test_checkid.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_checkid.dir/test_checkid.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_checkid.cpp [ 99%] Linking CXX executable test_checkid cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_checkid.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_checkid.dir/test_checkid.cpp.o -o test_checkid -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 99%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= Scanning dependencies of target test_bdsystem make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 99%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Bw7_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:106:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:128:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 128 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:137:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 137 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:146:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 146 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:160:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 160 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystem]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp: In instantiation of 'void LinSystemImplTest_Diagonal_Test<gtest_TypeParam_>::TestBody() [with gtest_TypeParam_ = steps::solver::efield::BDSystemLapack]': /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:75:1: required from here /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:91:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 91 | for (int i=0;i<n;++i) A.set(i,i,diag[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:94:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 94 | for (int i=0;i<n;++i) b.set(i,y[i]); | ~^~ /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/test_bdsystem.cpp:101:19: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 101 | for (int i=0;i<n;++i) { | ~^~ [100%] Building CXX object test/unit/cpp/CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/lib64/openmpi/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp/lapack_common.cpp [100%] Linking CXX executable test_bdsystem cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bdsystem.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -rdynamic CMakeFiles/test_bdsystem.dir/test_bdsystem.cpp.o CMakeFiles/test_bdsystem.dir/lapack_common.cpp.o -o test_bdsystem -ldl ../../../src/libsteps.so.3.5.0 -lgtest_main -lgtest -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [100%] Built target test_bdsystem /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'int __pyx_pymod_exec_cysteps_mpi(PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:132735:32: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without 132735 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_cysteps_mpi(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX shared module ../lib/steps/cysteps_mpi.so cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps && /usr/bin/cmake -E cmake_link_script CMakeFiles/cysteps.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib/steps/cysteps_mpi.so CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o ../src/libsteps.a -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [100%] Built target cysteps make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build-openmpi/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build-openmpi/pysteps/build/ running build running build_py creating ../build-openmpi/pysteps/build creating ../build-openmpi/pysteps/build/lib creating ../build-openmpi/pysteps/build/lib/steps copying steps/solver.py -> ../build-openmpi/pysteps/build/lib/steps copying steps/rng.py -> ../build-openmpi/pysteps/build/lib/steps copying steps/quiet.py -> ../build-openmpi/pysteps/build/lib/steps copying steps/model.py -> ../build-openmpi/pysteps/build/lib/steps copying steps/geom.py -> ../build-openmpi/pysteps/build/lib/steps copying steps/__init__.py -> ../build-openmpi/pysteps/build/lib/steps creating ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/__init__.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/StaticComponent.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/SimDisplay.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/Plotting.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/PartitionViewer.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/DynamicComponent.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/Control.py -> ../build-openmpi/pysteps/build/lib/steps/visual copying steps/visual/Colors.py -> ../build-openmpi/pysteps/build/lib/steps/visual creating ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/steps_shadow.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/steps_cubit.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/sbml.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/morph_support.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/metis_support.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/meshio.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/meshctrl.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/geom_decompose.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/cubit_support.py -> ../build-openmpi/pysteps/build/lib/steps/utilities copying steps/utilities/__init__.py -> ../build-openmpi/pysteps/build/lib/steps/utilities creating ../build-openmpi/pysteps/build/lib/steps/mpi copying steps/mpi/solver.py -> ../build-openmpi/pysteps/build/lib/steps/mpi copying steps/mpi/__init__.py -> ../build-openmpi/pysteps/build/lib/steps/mpi creating ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/simulate.py -> ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/matlab_parser.py -> ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/event_parser.py -> ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support copying steps/utilities/matlab_support/__init__.py -> ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 75 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.54fV8v + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 ++ dirname /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 + cd STEPS-3.5.0 *** INSTALLING steps-3.5.0 *** + export MPI_COMPILE_TYPE= + MPI_COMPILE_TYPE= + export MPI_SUFFIX= + MPI_SUFFIX= + export MPI_HOME=/usr + MPI_HOME=/usr + export MPI_BIN=/usr/bin + MPI_BIN=/usr/bin + export MPI_YES=False + MPI_YES=False + export MPI_COMPILE_TYPE= + MPI_COMPILE_TYPE= + export MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages + echo + echo '*** INSTALLING steps-3.5.0 ***' + echo + make install DESTDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 'INSTALL=install -p' 'CPPROG=cp -p' -C build make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/src /builddir/build/BUILD/STEPS-3.5.0/build/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps-obj.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 84%] Built target libsteps-obj make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/src /builddir/build/BUILD/STEPS-3.5.0/build/src/CMakeFiles/libsteps_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps_static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 85%] Built target libsteps_static make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/src /builddir/build/BUILD/STEPS-3.5.0/build/src/CMakeFiles/libsteps.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 86%] Built target libsteps make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/pysteps /builddir/build/BUILD/STEPS-3.5.0/build/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'pysteps/CMakeFiles/cysteps.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 87%] Built target cysteps make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_point3d.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_point3d.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 88%] Built target test_point3d make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_rng.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 90%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bbox.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 91%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_tetmesh.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 93%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_membership.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 94%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_sample.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 95%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_small_binomial.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 96%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_checkid.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [ 98%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' cd /builddir/build/BUILD/STEPS-3.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bdsystem.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' [100%] Built target test_bdsystem make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/cysteps.so make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build/pysteps/build/ install --install-lib=/usr/lib64/python3.8/site-packages -O1 --skip-build --root /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 running build running build_py running install running install_lib creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/mpi copying ../build/pysteps/build/lib/steps/mpi/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/mpi copying ../build/pysteps/build/lib/steps/mpi/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/mpi creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support copying ../build/pysteps/build/lib/steps/utilities/matlab_support/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support copying ../build/pysteps/build/lib/steps/utilities/matlab_support/event_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support copying ../build/pysteps/build/lib/steps/utilities/matlab_support/matlab_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support copying ../build/pysteps/build/lib/steps/utilities/matlab_support/simulate.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support copying ../build/pysteps/build/lib/steps/utilities/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/cubit_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/geom_decompose.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/meshctrl.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/meshio.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/metis_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/morph_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/sbml.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/steps_cubit.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities copying ../build/pysteps/build/lib/steps/utilities/steps_shadow.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/Colors.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/Control.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/DynamicComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/PartitionViewer.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/Plotting.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/SimDisplay.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/StaticComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/visual/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual copying ../build/pysteps/build/lib/steps/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps copying ../build/pysteps/build/lib/steps/geom.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps copying ../build/pysteps/build/lib/steps/model.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps copying ../build/pysteps/build/lib/steps/quiet.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps copying ../build/pysteps/build/lib/steps/rng.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps copying ../build/pysteps/build/lib/steps/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/mpi/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/mpi/solver.py to solver.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support/event_parser.py to event_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support/matlab_parser.py to matlab_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/matlab_support/simulate.py to simulate.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/cubit_support.py to cubit_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/geom_decompose.py to geom_decompose.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/meshctrl.py to meshctrl.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/meshio.py to meshio.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/metis_support.py to metis_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/morph_support.py to morph_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/sbml.py to sbml.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/steps_cubit.py to steps_cubit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/utilities/steps_shadow.py to steps_shadow.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/Colors.py to Colors.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/Control.py to Control.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/DynamicComponent.py to DynamicComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/PartitionViewer.py to PartitionViewer.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/Plotting.py to Plotting.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/SimDisplay.py to SimDisplay.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/StaticComponent.py to StaticComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/visual/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/geom.py to geom.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/model.py to model.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/quiet.py to quiet.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/rng.py to rng.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/solver.py to solver.cpython-38.pyc writing byte-compilation script '/tmp/tmpoa1ojhzk.py' /usr/bin/python3 /tmp/tmpoa1ojhzk.py removing /tmp/tmpoa1ojhzk.py running install_egg_info Writing /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps-3.5.0-py3.8.egg-info + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 11284 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH *** INSTALLING steps-3.5.0-mpich *** ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export MPI_YES=True + MPI_YES=True + export MPI_COMPILE_TYPE=-mpich + MPI_COMPILE_TYPE=-mpich + echo + echo '*** INSTALLING steps-3.5.0-mpich ***' + echo + make install DESTDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 'INSTALL=install -p' 'CPPROG=cp -p' -C build-mpich make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build-mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps-obj.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 86%] Built target libsteps-obj make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src/CMakeFiles/libsteps_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps_static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 86%] Built target libsteps_static make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src /builddir/build/BUILD/STEPS-3.5.0/build-mpich/src/CMakeFiles/libsteps.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 87%] Built target libsteps make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= Scanning dependencies of target cysteps make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 88%] Building CXX object pysteps/CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps && /usr/lib64/mpich/bin/mpicxx -DGNU_FORCE_INLINE=[[gnu::always_inline]] -DUSE_MPI -Dcysteps_EXPORTS -I/usr/include/python3.8 -I/builddir/build/BUILD/STEPS-3.5.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/easyloggingpp/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/src -isystem /builddir/build/BUILD/STEPS-3.5.0/src/third_party/cvode-2.6.0/include -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -fPIC -o CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o -c /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_102removeROI(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48769:174: warning: 'void steps::tetmesh::Tetmesh::removeROI(const string&)' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48769 | ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->removeROI(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:586:10: note: declared here 586 | void removeROI(std::string const &id); | ^~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_106getROIType(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:48989:187: warning: 'steps::tetmesh::ElementType steps::tetmesh::Tetmesh::getROIType(const string&) const' is deprecated: ROI type will be part of its identifier in future version [-Wdeprecated-declarations] 48989 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIType(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:594:17: note: declared here 594 | ElementType getROIType(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_108getROIData(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49064:187: warning: 'steps::tetmesh::ROISet::vector_data_type steps::tetmesh::Tetmesh::getROIData(const string&) const' is deprecated: type should be specified when retrieving a ROI [-Wdeprecated-declarations] 49064 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIData(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:598:30: note: declared here 598 | ROISet::vector_data_type getROIData(std::string const &id) const; | ^~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'PyObject* __pyx_pf_11cysteps_mpi_11_py_Tetmesh_110getROIDataSize(__pyx_obj_11cysteps_mpi__py_Tetmesh*, PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:49139:191: warning: 'uint steps::tetmesh::Tetmesh::getROIDataSize(const string&) const' is deprecated: usage lead to bad pattern [-Wdeprecated-declarations] 49139 | __pyx_t_1 = ((struct __pyx_vtabstruct_11cysteps_mpi__py_Tetmesh *)__pyx_v_self->__pyx_base.__pyx_vtab)->ptrx(__pyx_v_self)->getROIDataSize(__pyx_f_11cysteps_mpi_to_std_string(__pyx_v_id)); | ^ In file included from /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tmpatch.hpp:40, from /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:827: /builddir/build/BUILD/STEPS-3.5.0/src/steps/geom/tetmesh.hpp:603:10: note: declared here 603 | uint getROIDataSize(std::string const &id) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp: In function 'int __pyx_pymod_exec_cysteps_mpi(PyObject*)': /builddir/build/BUILD/STEPS-3.5.0/pysteps/steps/cysteps_mpi.cpp:132735:32: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without 132735 | static CYTHON_SMALL_CODE int __pyx_pymod_exec_cysteps_mpi(PyObject *__pyx_pyinit_module) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX shared module ../lib/steps/cysteps_mpi.so cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich/pysteps && /usr/bin/cmake -E cmake_link_script CMakeFiles/cysteps.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -std=c++11 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -march=native -fopenmp -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -o ../lib/steps/cysteps_mpi.so CMakeFiles/cysteps.dir/steps/cysteps_mpi.cpp.o ../src/libsteps.a -lopenblas make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 88%] Built target cysteps make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_point3d.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_point3d.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 89%] Built target test_point3d make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_rng.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 90%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bbox.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 92%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_tetmesh.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 94%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_membership.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 96%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_sample.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 97%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_small_binomial.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 98%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_checkid.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [ 99%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' cd /builddir/build/BUILD/STEPS-3.5.0/build-mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-mpich/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bdsystem.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' [100%] Built target test_bdsystem make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-mpich/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/cysteps_mpi.so make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-mpich' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build-mpich/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build-mpich/pysteps/build/ install --install-lib=/usr/lib64/python3.8/site-packages/mpich -O1 --skip-build --root /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 running build running build_py running install running install_lib creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/mpi copying ../build-mpich/pysteps/build/lib/steps/mpi/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/mpi copying ../build-mpich/pysteps/build/lib/steps/mpi/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/mpi creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support copying ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support copying ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support/event_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support copying ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support/matlab_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support copying ../build-mpich/pysteps/build/lib/steps/utilities/matlab_support/simulate.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support copying ../build-mpich/pysteps/build/lib/steps/utilities/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/cubit_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/geom_decompose.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/meshctrl.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/meshio.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/metis_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/morph_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/sbml.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/steps_cubit.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities copying ../build-mpich/pysteps/build/lib/steps/utilities/steps_shadow.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/Colors.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/Control.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/DynamicComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/PartitionViewer.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/Plotting.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/SimDisplay.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/StaticComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/visual/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual copying ../build-mpich/pysteps/build/lib/steps/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps copying ../build-mpich/pysteps/build/lib/steps/geom.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps copying ../build-mpich/pysteps/build/lib/steps/model.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps copying ../build-mpich/pysteps/build/lib/steps/quiet.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps copying ../build-mpich/pysteps/build/lib/steps/rng.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps copying ../build-mpich/pysteps/build/lib/steps/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/mpi/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/mpi/solver.py to solver.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support/event_parser.py to event_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support/matlab_parser.py to matlab_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/matlab_support/simulate.py to simulate.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/cubit_support.py to cubit_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/geom_decompose.py to geom_decompose.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/meshctrl.py to meshctrl.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/meshio.py to meshio.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/metis_support.py to metis_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/morph_support.py to morph_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/sbml.py to sbml.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/steps_cubit.py to steps_cubit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/utilities/steps_shadow.py to steps_shadow.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/Colors.py to Colors.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/Control.py to Control.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/DynamicComponent.py to DynamicComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/PartitionViewer.py to PartitionViewer.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/Plotting.py to Plotting.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/SimDisplay.py to SimDisplay.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/StaticComponent.py to StaticComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/visual/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/geom.py to geom.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/model.py to model.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/quiet.py to quiet.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/rng.py to rng.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/solver.py to solver.cpython-38.pyc writing byte-compilation script '/tmp/tmppxdyaxo5.py' /usr/bin/python3 /tmp/tmppxdyaxo5.py removing /tmp/tmppxdyaxo5.py running install_egg_info Writing /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps-3.5.0-py3.8.egg-info + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 11284 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 11284 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.8/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi *** INSTALLING steps-3.5.0-openmpi *** ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export MPI_YES=True + MPI_YES=True + export MPI_COMPILE_TYPE=-openmpi + MPI_COMPILE_TYPE=-openmpi + echo + echo '*** INSTALLING steps-3.5.0-openmpi ***' + echo + make install DESTDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 'INSTALL=install -p' 'CPPROG=cp -p' -C build-openmpi make: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' /usr/bin/cmake -S/builddir/build/BUILD/STEPS-3.5.0 -B/builddir/build/BUILD/STEPS-3.5.0/build-openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src/CMakeFiles/libsteps-obj.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps-obj.dir/build.make src/CMakeFiles/libsteps-obj.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps-obj.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 86%] Built target libsteps-obj make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src/CMakeFiles/libsteps_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps_static.dir/build.make src/CMakeFiles/libsteps_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps_static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 86%] Built target libsteps_static make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/src/CMakeFiles/libsteps.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f src/CMakeFiles/libsteps.dir/build.make src/CMakeFiles/libsteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'src/CMakeFiles/libsteps.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 87%] Built target libsteps make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/pysteps/CMakeFiles/cysteps.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f pysteps/CMakeFiles/cysteps.dir/build.make pysteps/CMakeFiles/cysteps.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'pysteps/CMakeFiles/cysteps.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 88%] Built target cysteps make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_point3d.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_point3d.dir/build.make test/unit/cpp/CMakeFiles/test_point3d.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_point3d.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 89%] Built target test_point3d make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_rng.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_rng.dir/build.make test/unit/cpp/CMakeFiles/test_rng.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_rng.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 90%] Built target test_rng make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_bbox.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_bbox.dir/build.make test/unit/cpp/CMakeFiles/test_bbox.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bbox.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 92%] Built target test_bbox make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_tetmesh.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_tetmesh.dir/build.make test/unit/cpp/CMakeFiles/test_tetmesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_tetmesh.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 94%] Built target test_tetmesh make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_membership.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_membership.dir/build.make test/unit/cpp/CMakeFiles/test_membership.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_membership.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 96%] Built target test_membership make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_sample.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_sample.dir/build.make test/unit/cpp/CMakeFiles/test_sample.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_sample.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 97%] Built target test_sample make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_small_binomial.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_small_binomial.dir/build.make test/unit/cpp/CMakeFiles/test_small_binomial.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_small_binomial.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 98%] Built target test_small_binomial make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_checkid.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_checkid.dir/build.make test/unit/cpp/CMakeFiles/test_checkid.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_checkid.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [ 99%] Built target test_checkid make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/depend make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' cd /builddir/build/BUILD/STEPS-3.5.0/build-openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/STEPS-3.5.0 /builddir/build/BUILD/STEPS-3.5.0/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/test/unit/cpp/CMakeFiles/test_bdsystem.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make -f test/unit/cpp/CMakeFiles/test_bdsystem.dir/build.make test/unit/cpp/CMakeFiles/test_bdsystem.dir/build make[2]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[2]: Nothing to be done for 'test/unit/cpp/CMakeFiles/test_bdsystem.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' [100%] Built target test_bdsystem make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/STEPS-3.5.0/build-openmpi/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/cysteps_mpi.so make: Leaving directory '/builddir/build/BUILD/STEPS-3.5.0/build-openmpi' + pushd pysteps ~/build/BUILD/STEPS-3.5.0/pysteps ~/build/BUILD/STEPS-3.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 ../build-openmpi/pysteps/cmake_setup.py build '--executable=/usr/bin/python3 -s' --build-base=../build-openmpi/pysteps/build/ install --install-lib=/usr/lib64/python3.8/site-packages/openmpi -O1 --skip-build --root /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 running build running build_py running install running install_lib creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/mpi copying ../build-openmpi/pysteps/build/lib/steps/mpi/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/mpi copying ../build-openmpi/pysteps/build/lib/steps/mpi/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/mpi creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support copying ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support copying ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support/event_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support copying ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support/matlab_parser.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support copying ../build-openmpi/pysteps/build/lib/steps/utilities/matlab_support/simulate.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support copying ../build-openmpi/pysteps/build/lib/steps/utilities/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/cubit_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/geom_decompose.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/meshctrl.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/meshio.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/metis_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/morph_support.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/sbml.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/steps_cubit.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities copying ../build-openmpi/pysteps/build/lib/steps/utilities/steps_shadow.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities creating /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/Colors.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/Control.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/DynamicComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/PartitionViewer.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/Plotting.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/SimDisplay.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/StaticComponent.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/visual/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual copying ../build-openmpi/pysteps/build/lib/steps/__init__.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps copying ../build-openmpi/pysteps/build/lib/steps/geom.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps copying ../build-openmpi/pysteps/build/lib/steps/model.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps copying ../build-openmpi/pysteps/build/lib/steps/quiet.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps copying ../build-openmpi/pysteps/build/lib/steps/rng.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps copying ../build-openmpi/pysteps/build/lib/steps/solver.py -> /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/mpi/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/mpi/solver.py to solver.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support/event_parser.py to event_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support/matlab_parser.py to matlab_parser.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/matlab_support/simulate.py to simulate.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/cubit_support.py to cubit_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/geom_decompose.py to geom_decompose.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/meshctrl.py to meshctrl.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/meshio.py to meshio.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/metis_support.py to metis_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/morph_support.py to morph_support.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/sbml.py to sbml.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/steps_cubit.py to steps_cubit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/utilities/steps_shadow.py to steps_shadow.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/Colors.py to Colors.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/Control.py to Control.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/DynamicComponent.py to DynamicComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/PartitionViewer.py to PartitionViewer.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/Plotting.py to Plotting.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/SimDisplay.py to SimDisplay.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/StaticComponent.py to StaticComponent.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/visual/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/geom.py to geom.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/model.py to model.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/quiet.py to quiet.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/rng.py to rng.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/solver.py to solver.cpython-38.pyc writing byte-compilation script '/tmp/tmp16ucr6ti.py' /usr/bin/python3 /tmp/tmp16ucr6ti.py removing /tmp/tmp16ucr6ti.py running install_egg_info Writing /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps-3.5.0-py3.8.egg-info + popd ~/build/BUILD/STEPS-3.5.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ SUPPORT_KSH=no ++ '[' no = yes -o -n '' -o -n '' ']' ++ unset SUPPORT_KSH ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 11284 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ source /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 3.5.0-1.fc33 --unique-debug-suffix -3.5.0-1.fc33.x86_64 --unique-debug-src-base python-steps-3.5.0-1.fc33.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/STEPS-3.5.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/cysteps_mpi.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/cysteps_mpi.so extracting debug info from /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/mpich/steps/cysteps_mpi.so extracting debug info from /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/openmpi/steps/cysteps_mpi.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/cysteps.so extracting debug info from /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8/site-packages/steps/cysteps.so original debug info size: 377768kB, size after compression: 248848kB /usr/lib/rpm/sepdebugcrcfix: Updated 3 CRC32s, 0 CRC32s did match. 35752 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib/debug/usr/lib64/python3.8 using /usr/bin/python3.8 Bytecompiling .py files below /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/lib64/python3.8 using /usr/bin/python3.8 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Processing files: python3-steps-3.5.0-1.fc33.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.UBirdu + umask 022 + cd /builddir/build/BUILD + cd STEPS-3.5.0 + LICENSEDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps + cp -pr LICENSE.md /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-steps = 3.5.0-1.fc33 python3-steps = 3.5.0-1.fc33 python3-steps(x86-64) = 3.5.0-1.fc33 python3.8-steps = 3.5.0-1.fc33 python3.8dist(steps) = 3.5 python3dist(steps) = 3.5 steps = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.8 rtld(GNU_HASH) Processing files: python3-steps-openmpi-3.5.0-1.fc33.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.0jIyBw + umask 022 + cd /builddir/build/BUILD + cd STEPS-3.5.0 + LICENSEDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-openmpi + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-openmpi + cp -pr LICENSE.md /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-steps-openmpi = 3.5.0-1.fc33 python3-steps-openmpi = 3.5.0-1.fc33 python3-steps-openmpi(x86-64) = 3.5.0-1.fc33 python3.8-steps-openmpi = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.8 rtld(GNU_HASH) Processing files: python3-steps-mpich-3.5.0-1.fc33.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.XAIkfv + umask 022 + cd /builddir/build/BUILD + cd STEPS-3.5.0 + LICENSEDIR=/builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-mpich + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-mpich + cp -pr LICENSE.md /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64/usr/share/licenses/python3-steps-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-steps-mpich = 3.5.0-1.fc33 python3-steps-mpich = 3.5.0-1.fc33 python3-steps-mpich(x86-64) = 3.5.0-1.fc33 python3.8-steps-mpich = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.8 rtld(GNU_HASH) Processing files: python-steps-debugsource-3.5.0-1.fc33.x86_64 Provides: python-steps-debugsource = 3.5.0-1.fc33 python-steps-debugsource(x86-64) = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python-steps-debuginfo-3.5.0-1.fc33.x86_64 Provides: python-steps-debuginfo = 3.5.0-1.fc33 python-steps-debuginfo(x86-64) = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-steps-debugsource(x86-64) = 3.5.0-1.fc33 Processing files: python3-steps-debuginfo-3.5.0-1.fc33.x86_64 Provides: debuginfo(build-id) = 456de5f9f9c2ed920f17734aff40c0925973b21e python-steps-debuginfo = 3.5.0-1.fc33 python3-steps-debuginfo = 3.5.0-1.fc33 python3-steps-debuginfo(x86-64) = 3.5.0-1.fc33 python3.8-steps-debuginfo = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-steps-debugsource(x86-64) = 3.5.0-1.fc33 Processing files: python3-steps-openmpi-debuginfo-3.5.0-1.fc33.x86_64 Provides: debuginfo(build-id) = adf590599ea3a9609fe607a9f55e54a606763884 python-steps-openmpi-debuginfo = 3.5.0-1.fc33 python3-steps-openmpi-debuginfo = 3.5.0-1.fc33 python3-steps-openmpi-debuginfo(x86-64) = 3.5.0-1.fc33 python3.8-steps-openmpi-debuginfo = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-steps-debugsource(x86-64) = 3.5.0-1.fc33 Processing files: python3-steps-mpich-debuginfo-3.5.0-1.fc33.x86_64 Provides: debuginfo(build-id) = 2bce2eb4c79b94446695c09f80b647031af2622b python-steps-mpich-debuginfo = 3.5.0-1.fc33 python3-steps-mpich-debuginfo = 3.5.0-1.fc33 python3-steps-mpich-debuginfo(x86-64) = 3.5.0-1.fc33 python3.8-steps-mpich-debuginfo = 3.5.0-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-steps-debugsource(x86-64) = 3.5.0-1.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 Wrote: /builddir/build/RPMS/python3-steps-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-steps-openmpi-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-steps-mpich-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python-steps-debugsource-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python-steps-debuginfo-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-steps-debuginfo-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-steps-openmpi-debuginfo-3.5.0-1.fc33.x86_64.rpm Wrote: /builddir/build/RPMS/python3-steps-mpich-debuginfo-3.5.0-1.fc33.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.QtQ6Zu + umask 022 + cd /builddir/build/BUILD + cd STEPS-3.5.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-steps-3.5.0-1.fc33.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-steps-3.5.0-1.fc33.src.rpm Finish: build phase for python-steps-3.5.0-1.fc33.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1589559251.745142/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1589559251.745142/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1589559251.745142/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/python-steps-3.5.0-1.fc33.src.rpm) Config(child) 33 minutes 26 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run