fsleyes.plugins.tools.saveflirtxfm

This module provides the SaveFlirtXfmAction class, an Action which allows the user to save an Image transformation to disk for use with FLIRT.

class fsleyes.plugins.tools.saveflirtxfm.SaveFlirtXfmAction(overlayList, displayCtx, frame)

Bases: fsleyes.actions.base.NeedOverlayAction

The SaveFlirtXfmAction class is an Action which allows the user to save an Image transformation to disk, either as a FLIRT matrix, or a voxel-to-world matrix.

__init__(overlayList, displayCtx, frame)

Create a SaveFlirtXfmAction.

Parameters

• overlayList – The OverlayList.

• displayCtx – The DisplayContext.

• frame – The FSLeyesFrame.

destroy()

Must be called when this SaveFlirtXfmAction is no longer needed.

__saveFlirtXfm()

Called when this action is executed. Prompts the user to save a FLIRT transform for the currently selected image.

__annotations__ = {}

__module__ = 'fsleyes.plugins.tools.saveflirtxfm'

fsleyes.plugins.tools.saveflirtxfm.calculateTransform(overlay, overlayList, displayCtx, refFile, srcXform=None)

Calculates and returns FLIRT transformation from the given overlay to the image specified by the given refFile.