%global packname BiocParallel %global __suggests_exclude ^R\\((BBmisc|BatchJobs|BiocStyle|RNAseqData\\.HNRNPC\\.bam\\.chr14|Rmpi|ShortRead|TxDb\\.Hsapiens\\.UCSC\\.hg19\\.knownGene|VariantAnnotation|batchtools)\\) Name: R-%{packname} Version: 1.30.3 Release: 8%{?dist} Summary: Bioconductor facilities for parallel evaluation License: GPLv2 or GPLv3 URL: http://www.bioconductor.org/packages/release/bioc/html/BiocParallel.html Source0: http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz Requires: texlive-latex # Depends BuildRequires: R-devel >= 3.5.0, R-methods # Imports BuildRequires: R-stats, R-utils, R-futile.logger, R-parallel, R-snow, R-codetools # LinkingTo BuildRequires: R-BH-devel BuildRequires: gcc, gcc-c++ BuildRequires: autoconf automake %description This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects. %prep %setup -c -q -n %{packname} chmod -x BiocParallel/inst/snow/RMPInode.R pushd %{packname} autoreconf -ifv popd %build %install mkdir -p $RPM_BUILD_ROOT%{_libdir}/R/library %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -rf $RPM_BUILD_ROOT%{_libdir}/R/library/R.css %check # All sorts of missing Suggests prevents this from working. # %%{_bindir}/R CMD check %%{packname} %files %dir %{_libdir}/R/library/%{packname} %doc %{_libdir}/R/library/%{packname}/html %{_libdir}/R/library/%{packname}/DESCRIPTION %doc %{_libdir}/R/library/%{packname}/NEWS %doc %{_libdir}/R/library/%{packname}/doc/ %{_libdir}/R/library/%{packname}/INDEX %{_libdir}/R/library/%{packname}/NAMESPACE %{_libdir}/R/library/%{packname}/Meta %{_libdir}/R/library/%{packname}/R %{_libdir}/R/library/%{packname}/help %{_libdir}/R/library/%{packname}/libs/ %{_libdir}/R/library/%{packname}/unitTests/ %{_libdir}/R/library/%{packname}/*.sh %{_libdir}/R/library/%{packname}/snow/ %changelog * Wed Jul 17 2024 Fedora Release Engineering - 1.30.3-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Thu Apr 25 2024 Iñaki Úcar - 1.30.3-7 - R-maint-sig mass rebuild * Mon Jan 22 2024 Fedora Release Engineering - 1.30.3-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Fri Jan 19 2024 Fedora Release Engineering - 1.30.3-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Wed Jul 19 2023 Fedora Release Engineering - 1.30.3-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Fri Apr 21 2023 Iñaki Úcar - 1.30.3-3 - R-maint-sig mass rebuild * Wed Jan 18 2023 Fedora Release Engineering - 1.30.3-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Sat Sep 3 2022 Tom Callaway - 1.30.3-1 - update to 1.30.3 - rebuild for R 4.2.1 * Wed Jul 20 2022 Fedora Release Engineering - 1.26.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jan 19 2022 Fedora Release Engineering - 1.26.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Wed Jul 21 2021 Fedora Release Engineering - 1.26.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild * Wed Jun 16 2021 Tom Callaway - 1.26.0-1 - update to 1.26.0 - Rebuilt for R 4.1.0 * Wed Feb 3 2021 Tom Callaway - 1.24.1-1 - update to 1.24.1 * Mon Jan 25 2021 Fedora Release Engineering - 1.22.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Mon Jul 27 2020 Fedora Release Engineering - 1.22.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Mon Jun 8 2020 Tom Callaway - 1.22.0-1 - update to 1.22.0 - rebuild for R 4 * Tue Jan 28 2020 Fedora Release Engineering - 1.20.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Wed Nov 06 2019 Elliott Sales de Andrade - 1.20.0-2 - Exclude Suggests for unavailable packages * Tue Nov 5 2019 Tom Callaway - 1.20.0-1 - update to 1.20.0 * Mon Aug 12 2019 Elliott Sales de Andrade - 1.16.5-3 - Remove explicit dependencies provided by automatic dependency generator * Wed Jul 24 2019 Fedora Release Engineering - 1.16.5-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Wed Feb 6 2019 Tom Callaway - 1.16.5-1 - update to 1.16.5 * Thu Jan 31 2019 Fedora Release Engineering - 1.14.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Thu Jul 12 2018 Fedora Release Engineering - 1.14.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed May 16 2018 Tom Callaway - 1.14.1-1 - update to 1.14.1 * Wed Mar 14 2018 Tom Callaway - 1.12.0-1 - update to 1.12.0 * Wed Feb 07 2018 Fedora Release Engineering - 1.10.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering - 1.10.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Wed May 31 2017 Tom Callaway - 1.10.1-1 - initial package