Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1684276089.810538/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e27b11a679c14647b5ac02fcfcb0f3d2', '-D', '/var/lib/mock/fedora-38-x86_64-1684276089.810538/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False error: %changelog not in descending chronological order Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1684195200 Wrote: /builddir/build/SRPMS/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1684276089.810538/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'f0cc0d7c2d9f43ca90da544a6c2e1630', '-D', '/var/lib/mock/fedora-38-x86_64-1684276089.810538/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False error: %changelog not in descending chronological order Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1684195200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.EqurXh + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf bioframe-0.4.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-bioframe-0.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd bioframe-0.4.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.YZoUBI + umask 022 + cd /builddir/build/BUILD + cd bioframe-0.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir --output /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1684276089.810538/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e3c4caf463b14869ad005e0c4614197e', '-D', '/var/lib/mock/fedora-38-x86_64-1684276089.810538/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False error: %changelog not in descending chronological order Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1684195200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qILTCC + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf bioframe-0.4.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-bioframe-0.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd bioframe-0.4.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.E0MWgG + umask 022 + cd /builddir/build/BUILD + cd bioframe-0.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir --output /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 65.5.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) running dist_info creating bioframe.egg-info writing bioframe.egg-info/PKG-INFO writing dependency_links to bioframe.egg-info/dependency_links.txt writing requirements to bioframe.egg-info/requires.txt writing top-level names to bioframe.egg-info/top_level.txt writing manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'bioframe.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/bioframe-0.4.1/bioframe-0.4.1.dist-info' Handling numpy (>=1.10) from hook generated metadata: Requires-Dist Requirement not satisfied: numpy (>=1.10) Handling matplotlib from hook generated metadata: Requires-Dist Requirement not satisfied: matplotlib Handling pandas (>=1.3) from hook generated metadata: Requires-Dist Requirement not satisfied: pandas (>=1.3) Handling requests from hook generated metadata: Requires-Dist Requirement not satisfied: requests + cat /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires + rm -rfv bioframe-0.4.1.dist-info/ removed 'bioframe-0.4.1.dist-info/LICENSE' removed 'bioframe-0.4.1.dist-info/METADATA' removed 'bioframe-0.4.1.dist-info/top_level.txt' removed directory 'bioframe-0.4.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1684276089.810538/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '7f1bfb872011480a94cbea365a49d5c8', '-D', '/var/lib/mock/fedora-38-x86_64-1684276089.810538/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False error: %changelog not in descending chronological order Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1684195200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.zQFiCJ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf bioframe-0.4.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-bioframe-0.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd bioframe-0.4.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.lH88sP + umask 022 + cd /builddir/build/BUILD + cd bioframe-0.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir --output /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 65.5.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) running dist_info creating bioframe.egg-info writing bioframe.egg-info/PKG-INFO writing dependency_links to bioframe.egg-info/dependency_links.txt writing requirements to bioframe.egg-info/requires.txt writing top-level names to bioframe.egg-info/top_level.txt writing manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'bioframe.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/bioframe-0.4.1/bioframe-0.4.1.dist-info' Handling numpy (>=1.10) from hook generated metadata: Requires-Dist Requirement satisfied: numpy (>=1.10) (installed: numpy 1.24.3) Handling matplotlib from hook generated metadata: Requires-Dist Requirement satisfied: matplotlib (installed: matplotlib 3.7.1) Handling pandas (>=1.3) from hook generated metadata: Requires-Dist Requirement satisfied: pandas (>=1.3) (installed: pandas 1.5.3) Handling requests from hook generated metadata: Requires-Dist Requirement satisfied: requests (installed: requests 2.28.2) + cat /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires + rm -rfv bioframe-0.4.1.dist-info/ removed 'bioframe-0.4.1.dist-info/LICENSE' removed 'bioframe-0.4.1.dist-info/METADATA' removed 'bioframe-0.4.1.dist-info/top_level.txt' removed directory 'bioframe-0.4.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1684276089.810538/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b9a75db7fda04a04b67a666ba291b96f', '-D', '/var/lib/mock/fedora-38-x86_64-1684276089.810538/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jg5kvmw1:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target x86_64 --nodeps /builddir/build/SPECS/python-bioframe.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False error: %changelog not in descending chronological order Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1684195200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.psqdby + umask 022 + cd /builddir/build/BUILD + cd bioframe-0.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + RPM_TOXENV=py311 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir --output /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 65.5.1) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.38.4) running dist_info writing bioframe.egg-info/PKG-INFO writing dependency_links to bioframe.egg-info/dependency_links.txt writing requirements to bioframe.egg-info/requires.txt writing top-level names to bioframe.egg-info/top_level.txt reading manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'bioframe.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/bioframe-0.4.1/bioframe-0.4.1.dist-info' Handling numpy (>=1.10) from hook generated metadata: Requires-Dist Requirement satisfied: numpy (>=1.10) (installed: numpy 1.24.3) Handling matplotlib from hook generated metadata: Requires-Dist Requirement satisfied: matplotlib (installed: matplotlib 3.7.1) Handling pandas (>=1.3) from hook generated metadata: Requires-Dist Requirement satisfied: pandas (>=1.3) (installed: pandas 1.5.3) Handling requests from hook generated metadata: Requires-Dist Requirement satisfied: requests (installed: requests 2.28.2) + cat /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-buildrequires + rm -rfv bioframe-0.4.1.dist-info/ removed 'bioframe-0.4.1.dist-info/LICENSE' removed 'bioframe-0.4.1.dist-info/METADATA' removed 'bioframe-0.4.1.dist-info/top_level.txt' removed directory 'bioframe-0.4.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.E1aLKI + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bioframe-0.4.1 + mkdir -p /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir Processing /builddir/build/BUILD/bioframe-0.4.1 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info writing /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-modern-metadata-oqg2rm0f/bioframe-0.4.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: bioframe Building wheel for bioframe (pyproject.toml): started Running command Building wheel for bioframe (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/bioframe copying bioframe/vis.py -> build/lib/bioframe copying bioframe/ops.py -> build/lib/bioframe copying bioframe/extras.py -> build/lib/bioframe copying bioframe/_version.py -> build/lib/bioframe copying bioframe/__init__.py -> build/lib/bioframe creating build/lib/bioframe/io copying bioframe/io/schemas.py -> build/lib/bioframe/io copying bioframe/io/resources.py -> build/lib/bioframe/io copying bioframe/io/fileops.py -> build/lib/bioframe/io copying bioframe/io/__init__.py -> build/lib/bioframe/io creating build/lib/bioframe/core copying bioframe/core/stringops.py -> build/lib/bioframe/core copying bioframe/core/specs.py -> build/lib/bioframe/core copying bioframe/core/construction.py -> build/lib/bioframe/core copying bioframe/core/checks.py -> build/lib/bioframe/core copying bioframe/core/arrops.py -> build/lib/bioframe/core copying bioframe/core/__init__.py -> build/lib/bioframe/core creating build/lib/bioframe/io/data copying bioframe/io/data/wuhCor1.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/t2t-chm13-v1.1.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/t2t-chm13-v1.0.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/sacCer3.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/mm9.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/mm39.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/mm10.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/hg38.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/hg19.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/dm6.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/dm3.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/danRer11.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/danRer10.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/ce11.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/ce10.seqinfo.tsv -> build/lib/bioframe/io/data copying bioframe/io/data/GRCh37.seqinfo.tsv -> build/lib/bioframe/io/data installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/bioframe creating build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/__init__.py -> build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/arrops.py -> build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/checks.py -> build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/construction.py -> build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/specs.py -> build/bdist.linux-x86_64/wheel/bioframe/core copying build/lib/bioframe/core/stringops.py -> build/bdist.linux-x86_64/wheel/bioframe/core creating build/bdist.linux-x86_64/wheel/bioframe/io creating build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/GRCh37.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/ce10.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/ce11.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/danRer10.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/danRer11.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/dm3.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/dm6.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/hg19.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/hg38.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/mm10.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/mm39.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/mm9.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/sacCer3.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/t2t-chm13-v1.0.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/t2t-chm13-v1.1.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/data/wuhCor1.seqinfo.tsv -> build/bdist.linux-x86_64/wheel/bioframe/io/data copying build/lib/bioframe/io/__init__.py -> build/bdist.linux-x86_64/wheel/bioframe/io copying build/lib/bioframe/io/fileops.py -> build/bdist.linux-x86_64/wheel/bioframe/io copying build/lib/bioframe/io/resources.py -> build/bdist.linux-x86_64/wheel/bioframe/io copying build/lib/bioframe/io/schemas.py -> build/bdist.linux-x86_64/wheel/bioframe/io copying build/lib/bioframe/__init__.py -> build/bdist.linux-x86_64/wheel/bioframe copying build/lib/bioframe/_version.py -> build/bdist.linux-x86_64/wheel/bioframe copying build/lib/bioframe/extras.py -> build/bdist.linux-x86_64/wheel/bioframe copying build/lib/bioframe/ops.py -> build/bdist.linux-x86_64/wheel/bioframe copying build/lib/bioframe/vis.py -> build/bdist.linux-x86_64/wheel/bioframe running install_egg_info running egg_info writing bioframe.egg-info/PKG-INFO writing dependency_links to bioframe.egg-info/dependency_links.txt writing requirements to bioframe.egg-info/requires.txt writing top-level names to bioframe.egg-info/top_level.txt reading manifest file 'bioframe.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'bioframe.egg-info/SOURCES.txt' Copying bioframe.egg-info to build/bdist.linux-x86_64/wheel/bioframe-0.4.1-py3.11.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/bioframe-0.4.1.dist-info/WHEEL creating '/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir/pip-wheel-kfg0i7wd/tmp5a7l7z4e/bioframe-0.4.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'bioframe/__init__.py' adding 'bioframe/_version.py' adding 'bioframe/extras.py' adding 'bioframe/ops.py' adding 'bioframe/vis.py' adding 'bioframe/core/__init__.py' adding 'bioframe/core/arrops.py' adding 'bioframe/core/checks.py' adding 'bioframe/core/construction.py' adding 'bioframe/core/specs.py' adding 'bioframe/core/stringops.py' adding 'bioframe/io/__init__.py' adding 'bioframe/io/fileops.py' adding 'bioframe/io/resources.py' adding 'bioframe/io/schemas.py' adding 'bioframe/io/data/GRCh37.seqinfo.tsv' adding 'bioframe/io/data/ce10.seqinfo.tsv' adding 'bioframe/io/data/ce11.seqinfo.tsv' adding 'bioframe/io/data/danRer10.seqinfo.tsv' adding 'bioframe/io/data/danRer11.seqinfo.tsv' adding 'bioframe/io/data/dm3.seqinfo.tsv' adding 'bioframe/io/data/dm6.seqinfo.tsv' adding 'bioframe/io/data/hg19.seqinfo.tsv' adding 'bioframe/io/data/hg38.seqinfo.tsv' adding 'bioframe/io/data/mm10.seqinfo.tsv' adding 'bioframe/io/data/mm39.seqinfo.tsv' adding 'bioframe/io/data/mm9.seqinfo.tsv' adding 'bioframe/io/data/sacCer3.seqinfo.tsv' adding 'bioframe/io/data/t2t-chm13-v1.0.seqinfo.tsv' adding 'bioframe/io/data/t2t-chm13-v1.1.seqinfo.tsv' adding 'bioframe/io/data/wuhCor1.seqinfo.tsv' adding 'bioframe-0.4.1.dist-info/LICENSE' adding 'bioframe-0.4.1.dist-info/METADATA' adding 'bioframe-0.4.1.dist-info/WHEEL' adding 'bioframe-0.4.1.dist-info/top_level.txt' adding 'bioframe-0.4.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for bioframe (pyproject.toml): finished with status 'done' Created wheel for bioframe: filename=bioframe-0.4.1-py2.py3-none-any.whl size=114481 sha256=073c4a0d491f079943e73d774626875bde39822d4f9f3c0b0085959e8cfc74b8 Stored in directory: /builddir/.cache/pip/wheels/77/28/07/dbbaf955b63350f708e1543e167226d6f1cea47bca874d0c6e Successfully built bioframe + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.SM9cPH + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 ++ dirname /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bioframe-0.4.1 ++ ls /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir/bioframe-0.4.1-py2.py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=bioframe==0.4.1 + TMPDIR=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir bioframe==0.4.1 Using pip 22.3.1 from /usr/lib/python3.11/site-packages/pip (python 3.11) Looking in links: /builddir/build/BUILD/bioframe-0.4.1/pyproject-wheeldir Processing ./pyproject-wheeldir/bioframe-0.4.1-py2.py3-none-any.whl Installing collected packages: bioframe Successfully installed bioframe-0.4.1 + '[' -d /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/bin ']' + rm -f /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages ']' + site_dirs+=("/usr/lib/python3.11/site-packages") + '[' /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib64/python3.11/site-packages '!=' /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib64/python3.11/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 --record /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/RECORD --output /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-record + rm -fv /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages/bioframe-0.4.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-modules --buildroot /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 --sitelib /usr/lib/python3.11/site-packages --sitearch /usr/lib64/python3.11/site-packages --python-version 3.11 --pyproject-record /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-record --prefix /usr bioframe + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.4.1-1.20230516222727641209.pr4.fc38 --unique-debug-suffix -0.4.1-1.20230516222727641209.pr4.fc38.x86_64 --unique-debug-src-base python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/bioframe-0.4.1 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.n1yR5h + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd bioframe-0.4.1 + '[' '!' -f /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages + _PYTHONSITE=/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64-pyproject-modules Check import: bioframe Check import: bioframe.core Check import: bioframe.core.arrops Check import: bioframe.core.checks Check import: bioframe.core.construction Check import: bioframe.core.specs Check import: bioframe.core.stringops Check import: bioframe.extras Check import: bioframe.io Check import: bioframe.io.fileops Check import: bioframe.io.resources Check import: bioframe.io.schemas Check import: bioframe.ops Check import: bioframe.vis + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib64/python3.11/site-packages:/builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64/usr/lib/python3.11/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/bioframe-0.4.1/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest ============================= test session starts ============================== platform linux -- Python 3.11.3, pytest-7.2.2, pluggy-1.0.0 rootdir: /builddir/build/BUILD/bioframe-0.4.1 collected 50 items tests/test_core_checks.py ........ [ 16%] tests/test_core_construction.py .... [ 24%] tests/test_core_specs.py ..... [ 34%] tests/test_core_stringops.py .... [ 42%] tests/test_extras.py ..sss.. [ 56%] tests/test_io.py .. [ 60%] tests/test_ops.py ............. [ 86%] tests/test_ops_select.py ....... [100%] =============================== warnings summary =============================== tests/test_io.py:23 /builddir/build/BUILD/bioframe-0.4.1/tests/test_io.py:23: DeprecationWarning: invalid escape sequence '\s' assert bioframe.read_table(StringIO(d), schema="bed3", sep="\s+").shape == (3, 3) tests/test_io.py:24 /builddir/build/BUILD/bioframe-0.4.1/tests/test_io.py:24: DeprecationWarning: invalid escape sequence '\s' assert bioframe.read_table(StringIO(d), schema="bed6", sep="\s+").shape == (3, 6) tests/test_io.py:25 /builddir/build/BUILD/bioframe-0.4.1/tests/test_io.py:25: DeprecationWarning: invalid escape sequence '\s' assert bioframe.read_table(StringIO(d), schema="bed12", sep="\s+").shape == (3, 12) tests/test_io.py:33 /builddir/build/BUILD/bioframe-0.4.1/tests/test_io.py:33: DeprecationWarning: invalid escape sequence '\s' StringIO(d), schema="bedpe", sep="\s+", schema_is_strict=True -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================== 47 passed, 3 skipped, 4 warnings in 2.91s =================== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.noarch Provides: python-bioframe = 0.4.1-1.20230516222727641209.pr4.fc38 python3-bioframe = 0.4.1-1.20230516222727641209.pr4.fc38 python3.11-bioframe = 0.4.1-1.20230516222727641209.pr4.fc38 python3.11dist(bioframe) = 0.4.1 python3dist(bioframe) = 0.4.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.11 python3.11dist(matplotlib) python3.11dist(numpy) >= 1.10 python3.11dist(pandas) >= 1.3 python3.11dist(requests) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 Wrote: /builddir/build/SRPMS/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.src.rpm Wrote: /builddir/build/RPMS/python3-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.vwKs96 + umask 022 + cd /builddir/build/BUILD + cd bioframe-0.4.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-bioframe-0.4.1-1.20230516222727641209.pr4.fc38.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.eFOf5B + umask 022 + cd /builddir/build/BUILD + rm -rf bioframe-0.4.1 bioframe-0.4.1.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0