Warning: Permanently added '54.234.73.253' (ECDSA) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 2224037 --chroot centos-stream-8-x86_64 --detached Version: 0.51 Task: {'background': False, 'bootstrap': 'off', 'build_id': 2224037, 'buildroot_pkgs': ['epel-release'], 'chroot': 'centos-stream-8-x86_64', 'enable_net': True, 'fedora_review': False, 'git_hash': '4a04bd1551e92ceb89f4fb2c583f8717cc0f80ae', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'h5py', 'package_version': '2.10.0-4.el7', 'project_dirname': 'Huawei-HiQ', 'project_name': 'Huawei-HiQ', 'project_owner': 'huaweihiq', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/huaweihiq/Huawei-HiQ/centos-stream-8-x86_64/', 'id': 'copr_base', 'module_hotfixes': True, 'name': 'Copr repository'}, {'baseurl': 'http://pkg.adfinis.com/centos/8-stream/PowerTools/x86_64/os/', 'id': 'http_pkg_adfinis_com_centos_8_stream_PowerTools_x86_64_os', 'name': 'Additional repo http_pkg_adfinis_com_centos_8_stream_PowerTools_x86_64_os'}, {'baseurl': 'https://mirror.init7.net/fedora/epel/8/Everything/x86_64/', 'id': 'https_mirror_init7_net_fedora_epel_8_Everything_x86_64', 'name': 'Additional repo https_mirror_init7_net_fedora_epel_8_Everything_x86_64'}, {'baseurl': 'http://linuxsoft.cern.ch/epel/8/Modular/x86_64/', 'id': 'http_linuxsoft_cern_ch_epel_8_Modular_x86_64', 'name': 'Additional repo http_linuxsoft_cern_ch_epel_8_Modular_x86_64'}], 'sandbox': 'huaweihiq/Huawei-HiQ--huaweihiq', 'source_json': {}, 'source_type': None, 'submitter': 'huaweihiq', 'task_id': '2224037-centos-stream-8-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git /var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/huaweihiq/Huawei-HiQ/h5py.git', '/var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py'... Running: git checkout 4a04bd1551e92ceb89f4fb2c583f8717cc0f80ae cmd: ['git', 'checkout', '4a04bd1551e92ceb89f4fb2c583f8717cc0f80ae'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py rc: 0 stdout: stderr: Note: switching to '4a04bd1551e92ceb89f4fb2c583f8717cc0f80ae'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 4a04bd1 automatic import of h5py Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading h5py-2.10.0.tar.gz INFO: Calling: curl -H Pragma: -o h5py-2.10.0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/huaweihiq/Huawei-HiQ/h5py/h5py-2.10.0.tar.gz/md5/504b595237409ab766fbbe568e60a080/h5py-2.10.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 294k 100 294k 0 0 17.9M 0 --:--:-- --:--:-- --:--:-- 17.9M INFO: Reading stdout from command: md5sum h5py-2.10.0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py/h5py.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1622759296.159212 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.10 starting (python version = 3.9.5, NVR = mock-2.10-1.fc34)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py/h5py.spec) Config(centos-stream-8-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.10 INFO: Mock Version: 2.10 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk Invalid configuration value: failovermethod=priority in /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/etc/dnf/dnf.conf; Configuration: OptionBinding with id "failovermethod" does not exist Copr repository 1.2 MB/s | 103 kB 00:00 Additional repo http_pkg_adfinis_com_centos_8_s 1.9 MB/s | 2.4 MB 00:01 Additional repo https_mirror_init7_net_fedora_e 4.4 MB/s | 9.4 MB 00:02 Additional repo http_linuxsoft_cern_ch_epel_8_M 58 kB/s | 610 kB 00:10 CentOS-Stream - Base 5.2 MB/s | 5.7 MB 00:01 CentOS-Stream - AppStream 7.9 MB/s | 9.6 MB 00:01 CentOS-Stream - Extras 49 kB/s | 13 kB 00:00 CentOS-Stream - PowerTools 2.7 MB/s | 2.4 MB 00:00 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k [1mpcre [m x86_64 8.42-5.el8.0.1 Stream-BaseOS 211 k [1mpcre2 [m x86_64 10.32-2.el8 Stream-BaseOS 246 k [1mperl-srpm-macros [m noarch 1-25.el8 Stream-AppStream 11 k [1mpkgconf [m x86_64 1.4.2-1.el8 Stream-BaseOS 38 k [1mpkgconf-m4 [m noarch 1.4.2-1.el8 Stream-BaseOS 17 k [1mpkgconf-pkg-config [m x86_64 1.4.2-1.el8 Stream-BaseOS 15 k [1mplatform-python [m x86_64 3.6.8-38.el8 Stream-BaseOS 84 k [1mplatform-python-setuptools [m noarch 39.2.0-6.el8 Stream-BaseOS 632 k [1mpopt [m x86_64 1.18-1.el8 Stream-BaseOS 61 k [1mprocps-ng [m x86_64 3.3.15-6.el8 Stream-BaseOS 329 k [1mpublicsuffix-list-dafsa [m noarch 20180723-1.el8 Stream-BaseOS 56 k [1mpython-rpm-macros [m noarch 3-41.el8 Stream-AppStream 15 k [1mpython-srpm-macros [m noarch 3-41.el8 Stream-AppStream 15 k [1mpython3-libs [m x86_64 3.6.8-38.el8 Stream-BaseOS 7.8 M [1mpython3-pip-wheel [m noarch 9.0.3-19.el8 Stream-BaseOS 1.0 M [1mpython3-rpm-macros [m noarch 3-41.el8 Stream-AppStream 14 k [1mpython3-setuptools-wheel [m noarch 39.2.0-6.el8 Stream-BaseOS 289 k [1mqt5-srpm-macros [m noarch 5.15.2-1.el8 Stream-AppStream 11 k [1mrdma-core [m x86_64 35.0-1.el8 Stream-BaseOS 59 k [1mreadline [m x86_64 7.0-10.el8 Stream-BaseOS 199 k [1mrpm [m x86_64 4.14.3-14.el8_4 Stream-BaseOS 542 k [1mrpm-build-libs [m x86_64 4.14.3-14.el8_4 Stream-BaseOS 155 k [1mrpm-libs [m x86_64 4.14.3-14.el8_4 Stream-BaseOS 339 k [1mrust-srpm-macros [m noarch 5-2.el8 Stream-AppStream 9.2 k [1msetup [m noarch 2.12.2-6.el8 Stream-BaseOS 181 k [1msqlite-libs [m x86_64 3.26.0-15.el8 Stream-BaseOS 581 k [1msystemd-libs [m x86_64 239-45.el8 Stream-BaseOS 1.1 M [1msystemd-pam [m x86_64 239-45.el8 Stream-BaseOS 468 k [1msystemd-udev [m x86_64 239-45.el8 Stream-BaseOS 1.4 M [1mtpm2-tss [m x86_64 2.3.2-4.el8 Stream-BaseOS 275 k [1mtrousers-lib [m x86_64 0.3.15-1.el8 Stream-BaseOS 168 k [1mtzdata [m noarch 2021a-1.el8 Stream-BaseOS 473 k [1mxkeyboard-config [m noarch 2.28-1.el8 Stream-AppStream 782 k [1mxz-libs [m x86_64 5.2.4-3.el8 Stream-BaseOS 94 k [1mzip [m x86_64 3.0-23.el8 Stream-BaseOS 270 k [1mzlib [m x86_64 1.2.11-17.el8 Stream-BaseOS 102 k [1mzstd [m x86_64 1.4.4-1.el8 Stream-AppStream 393 k Installing weak dependencies: [1mcrypto-policies-scripts [m noarch 20210209-1.gitbfb6bed.el8_3 Stream-BaseOS 67 k [1melfutils-debuginfod-client [m x86_64 0.182-3.el8 Stream-BaseOS 65 k [1mgnupg2-smime [m x86_64 2.2.20-2.el8 Stream-BaseOS 283 k [1mgrubby [m x86_64 8.40-41.el8 Stream-BaseOS 49 k [1mhardlink [m x86_64 1:1.3-6.el8 Stream-BaseOS 29 k [1mkbd [m x86_64 2.0.4-10.el8 Stream-BaseOS 390 k [1mkpartx [m x86_64 0.8.4-13.el8 Stream-BaseOS 112 k [1mlibxkbcommon [m x86_64 0.9.1-1.el8 Stream-AppStream 116 k [1mmemstrack [m x86_64 0.1.11-1.el8 Stream-BaseOS 48 k [1mopenssl-pkcs11 [m x86_64 0.4.10-2.el8 Stream-BaseOS 66 k [1mpigz [m x86_64 2.4-4.el8 Stream-BaseOS 79 k [1mpinentry [m x86_64 1.1.0-2.el8 Stream-AppStream 100 k [1mplatform-python-pip [m noarch 9.0.3-19.el8 Stream-BaseOS 1.7 M [1mshared-mime-info [m x86_64 1.9-3.el8 Stream-BaseOS 329 k [1msystemd [m x86_64 239-45.el8 Stream-BaseOS 3.6 M [1mtrousers [m x86_64 0.3.15-1.el8 Stream-BaseOS 152 k Transaction Summary ============================================================================================== Install 225 Packages Total download size: 181 M Installed size: 897 M Downloading Packages: (1/225): basesystem-11-5.el8.noarch.rpm 78 kB/s | 10 kB 00:00 (2/225): acl-2.2.53-1.el8.x86_64.rpm 328 kB/s | 81 kB 00:00 (3/225): audit-libs-3.0-0.17.20191104git1c2f876 370 kB/s | 116 kB 00:00 (4/225): brotli-1.0.6-3.el8.x86_64.rpm 1.0 MB/s | 323 kB 00:00 (5/225): bash-4.4.20-1.el8_4.x86_64.rpm 2.8 MB/s | 1.5 MB 00:00 (6/225): bzip2-1.0.6-26.el8.x86_64.rpm 898 kB/s | 60 kB 00:00 (7/225): bzip2-libs-1.0.6-26.el8.x86_64.rpm 636 kB/s | 48 kB 00:00 (8/225): centos-gpg-keys-8-2.el8.noarch.rpm 201 kB/s | 12 kB 00:00 (9/225): ca-certificates-2020.2.41-80.0.el8_2.n 2.5 MB/s | 391 kB 00:00 (10/225): binutils-2.30-102.el8.x86_64.rpm 9.3 MB/s | 5.8 MB 00:00 (11/225): centos-stream-release-8.5-3.el8.noarc 363 kB/s | 22 kB 00:00 (12/225): centos-stream-repos-8-2.el8.noarch.rp 312 kB/s | 19 kB 00:00 (13/225): chkconfig-1.13-2.el8.x86_64.rpm 2.6 MB/s | 194 kB 00:00 (14/225): cpio-2.12-10.el8.x86_64.rpm 4.1 MB/s | 265 kB 00:00 (15/225): coreutils-8.30-9.el8.x86_64.rpm 9.1 MB/s | 1.2 MB 00:00 (16/225): coreutils-common-8.30-9.el8.x86_64.rp 11 MB/s | 2.0 MB 00:00 (17/225): cracklib-2.9.6-15.el8.x86_64.rpm 1.1 MB/s | 93 kB 00:00 (18/225): crypto-policies-20210209-1.gitbfb6bed 1.0 MB/s | 62 kB 00:00 (19/225): crypto-policies-scripts-20210209-1.gi 1.1 MB/s | 67 kB 00:00 (20/225): cryptsetup-libs-2.3.3-4.el8.x86_64.rp 6.4 MB/s | 470 kB 00:00 (21/225): curl-7.61.1-18.el8.x86_64.rpm 4.6 MB/s | 353 kB 00:00 (22/225): cracklib-dicts-2.9.6-15.el8.x86_64.rp 17 MB/s | 4.0 MB 00:00 (23/225): dbus-1.12.8-14.el8.x86_64.rpm 682 kB/s | 41 kB 00:00 (24/225): cyrus-sasl-lib-2.1.27-5.el8.x86_64.rp 1.7 MB/s | 123 kB 00:00 (25/225): dbus-common-1.12.8-14.el8.noarch.rpm 758 kB/s | 46 kB 00:00 (26/225): dbus-daemon-1.12.8-14.el8.x86_64.rpm 3.5 MB/s | 240 kB 00:00 (27/225): dbus-libs-1.12.8-14.el8.x86_64.rpm 2.9 MB/s | 184 kB 00:00 (28/225): dbus-tools-1.12.8-14.el8.x86_64.rpm 1.3 MB/s | 85 kB 00:00 (29/225): device-mapper-1.02.175-5.el8.x86_64.r 5.6 MB/s | 375 kB 00:00 (30/225): device-mapper-libs-1.02.175-5.el8.x86 6.0 MB/s | 408 kB 00:00 (31/225): diffutils-3.6-6.el8.x86_64.rpm 4.7 MB/s | 358 kB 00:00 (32/225): dracut-049-136.git20210426.el8.x86_64 5.3 MB/s | 371 kB 00:00 (33/225): elfutils-0.182-3.el8.x86_64.rpm 7.6 MB/s | 540 kB 00:00 (34/225): elfutils-debuginfod-client-0.182-3.el 1.0 MB/s | 65 kB 00:00 (35/225): elfutils-libelf-0.182-3.el8.x86_64.rp 3.4 MB/s | 216 kB 00:00 (36/225): elfutils-libs-0.182-3.el8.x86_64.rpm 4.5 MB/s | 293 kB 00:00 (37/225): elfutils-default-yama-scope-0.182-3.e 560 kB/s | 49 kB 00:00 (38/225): file-5.33-20.el8.x86_64.rpm 1.2 MB/s | 77 kB 00:00 (39/225): expat-2.2.5-4.el8.x86_64.rpm 1.3 MB/s | 111 kB 00:00 (40/225): file-libs-5.33-20.el8.x86_64.rpm 7.8 MB/s | 543 kB 00:00 (41/225): gawk-4.2.1-2.el8.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (42/225): filesystem-3.8-3.el8.x86_64.rpm 10 MB/s | 1.1 MB 00:00 (43/225): findutils-4.6.0-20.el8.x86_64.rpm 5.0 MB/s | 528 kB 00:00 (44/225): gdbm-1.18-1.el8.x86_64.rpm 1.8 MB/s | 130 kB 00:00 (45/225): gdbm-libs-1.18-1.el8.x86_64.rpm 883 kB/s | 60 kB 00:00 (46/225): gettext-0.19.8.1-17.el8.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (47/225): gettext-libs-0.19.8.1-17.el8.x86_64.r 4.3 MB/s | 314 kB 00:00 (48/225): glib2-2.56.4-13.el8.x86_64.rpm 18 MB/s | 2.5 MB 00:00 (49/225): glibc-2.28-158.el8.x86_64.rpm 17 MB/s | 3.6 MB 00:00 (50/225): glibc-common-2.28-158.el8.x86_64.rpm 13 MB/s | 1.3 MB 00:00 (51/225): glibc-devel-2.28-158.el8.x86_64.rpm 11 MB/s | 1.0 MB 00:00 (52/225): glibc-headers-2.28-158.el8.x86_64.rpm 4.6 MB/s | 479 kB 00:00 (53/225): gmp-6.1.2-10.el8.x86_64.rpm 3.8 MB/s | 322 kB 00:00 (54/225): gnupg2-smime-2.2.20-2.el8.x86_64.rpm 3.4 MB/s | 283 kB 00:00 (55/225): gnupg2-2.2.20-2.el8.x86_64.rpm 15 MB/s | 2.4 MB 00:00 (56/225): gnutls-3.6.14-8.el8_3.x86_64.rpm 13 MB/s | 1.0 MB 00:00 (57/225): grep-3.1-6.el8.x86_64.rpm 3.3 MB/s | 274 kB 00:00 (58/225): grub2-common-2.02-99.el8.noarch.rpm 10 MB/s | 890 kB 00:00 (59/225): grub2-tools-minimal-2.02-99.el8.x86_6 3.3 MB/s | 209 kB 00:00 (60/225): grubby-8.40-41.el8.x86_64.rpm 813 kB/s | 49 kB 00:00 (61/225): grub2-tools-2.02-99.el8.x86_64.rpm 10 MB/s | 2.0 MB 00:00 (62/225): gzip-1.9-12.el8.x86_64.rpm 2.7 MB/s | 167 kB 00:00 (63/225): hardlink-1.3-6.el8.x86_64.rpm 448 kB/s | 29 kB 00:00 (64/225): ima-evm-utils-1.3.2-12.el8.x86_64.rpm 1.0 MB/s | 64 kB 00:00 (65/225): hwdata-0.314-8.8.el8.noarch.rpm 13 MB/s | 1.7 MB 00:00 (66/225): info-6.5-6.el8.x86_64.rpm 2.6 MB/s | 198 kB 00:00 (67/225): iptables-libs-1.8.4-17.el8.x86_64.rpm 1.7 MB/s | 107 kB 00:00 (68/225): json-c-0.13.1-2.el8.x86_64.rpm 669 kB/s | 40 kB 00:00 (69/225): kbd-2.0.4-10.el8.x86_64.rpm 4.9 MB/s | 390 kB 00:00 (70/225): kbd-legacy-2.0.4-10.el8.noarch.rpm 5.9 MB/s | 481 kB 00:00 (71/225): glibc-all-langpacks-2.28-158.el8.x86_ 21 MB/s | 25 MB 00:01 (72/225): kbd-misc-2.0.4-10.el8.noarch.rpm 7.9 MB/s | 1.5 MB 00:00 (73/225): keyutils-libs-1.5.10-6.el8.x86_64.rpm 472 kB/s | 34 kB 00:00 (74/225): kmod-25-17.el8.x86_64.rpm 2.0 MB/s | 126 kB 00:00 (75/225): kmod-libs-25-17.el8.x86_64.rpm 1.1 MB/s | 68 kB 00:00 (76/225): kpartx-0.8.4-13.el8.x86_64.rpm 1.8 MB/s | 112 kB 00:00 (77/225): libacl-2.2.53-1.el8.x86_64.rpm 553 kB/s | 35 kB 00:00 (78/225): krb5-libs-1.18.2-10.el8.x86_64.rpm 11 MB/s | 838 kB 00:00 (79/225): kernel-headers-4.18.0-305.3.1.el8.x86 17 MB/s | 7.1 MB 00:00 (80/225): libassuan-2.5.1-3.el8.x86_64.rpm 1.3 MB/s | 83 kB 00:00 (81/225): libarchive-3.3.3-1.el8.x86_64.rpm 4.8 MB/s | 359 kB 00:00 (82/225): libblkid-2.32.1-27.el8.x86_64.rpm 3.4 MB/s | 217 kB 00:00 (83/225): libattr-2.4.48-3.el8.x86_64.rpm 391 kB/s | 27 kB 00:00 (84/225): libbabeltrace-1.5.4-3.el8.x86_64.rpm 2.4 MB/s | 200 kB 00:00 (85/225): libcap-ng-0.7.9-5.el8.x86_64.rpm 490 kB/s | 33 kB 00:00 (86/225): libcap-2.26-4.el8.x86_64.rpm 821 kB/s | 60 kB 00:00 (87/225): libcom_err-1.45.6-1.el8.x86_64.rpm 675 kB/s | 49 kB 00:00 (88/225): libcurl-7.61.1-18.el8.x86_64.rpm 4.6 MB/s | 299 kB 00:00 (89/225): libcroco-0.6.12-4.el8_2.1.x86_64.rpm 1.5 MB/s | 113 kB 00:00 (90/225): libdb-5.3.28-40.el8.x86_64.rpm 10 MB/s | 751 kB 00:00 (91/225): libdb-utils-5.3.28-40.el8.x86_64.rpm 2.4 MB/s | 150 kB 00:00 (92/225): libfdisk-2.32.1-27.el8.x86_64.rpm 3.9 MB/s | 250 kB 00:00 (93/225): libffi-3.1-22.el8.x86_64.rpm 621 kB/s | 37 kB 00:00 (94/225): libgcc-8.5.0-1.el8.x86_64.rpm 1.3 MB/s | 79 kB 00:00 (95/225): libgcrypt-1.8.5-5.el8.x86_64.rpm 6.9 MB/s | 463 kB 00:00 (96/225): libgomp-8.5.0-1.el8.x86_64.rpm 3.2 MB/s | 206 kB 00:00 (97/225): libgpg-error-1.31-1.el8.x86_64.rpm 3.8 MB/s | 242 kB 00:00 (98/225): libibverbs-35.0-1.el8.x86_64.rpm 5.1 MB/s | 335 kB 00:00 (99/225): libidn2-2.2.0-1.el8.x86_64.rpm 1.2 MB/s | 94 kB 00:00 (100/225): libkcapi-1.2.0-2.el8.x86_64.rpm 706 kB/s | 48 kB 00:00 (101/225): libkcapi-hmaccalc-1.2.0-2.el8.x86_64 516 kB/s | 31 kB 00:00 (102/225): libksba-1.3.5-7.el8.x86_64.rpm 2.2 MB/s | 135 kB 00:00 (103/225): libmetalink-0.1.3-7.el8.x86_64.rpm 472 kB/s | 32 kB 00:00 (104/225): libmount-2.32.1-27.el8.x86_64.rpm 3.6 MB/s | 233 kB 00:00 (105/225): libnghttp2-1.33.0-3.el8_2.1.x86_64.r 1.1 MB/s | 77 kB 00:00 (106/225): libnsl2-1.2.0-2.20180605git4a062cf.e 957 kB/s | 58 kB 00:00 (107/225): libnl3-3.5.0-1.el8.x86_64.rpm 3.8 MB/s | 320 kB 00:00 (108/225): libpcap-1.9.1-5.el8.x86_64.rpm 2.7 MB/s | 169 kB 00:00 (109/225): libpkgconf-1.4.2-1.el8.x86_64.rpm 577 kB/s | 35 kB 00:00 (110/225): libpsl-0.20.2-6.el8.x86_64.rpm 1.0 MB/s | 61 kB 00:00 (111/225): libpwquality-1.4.4-3.el8.x86_64.rpm 1.7 MB/s | 107 kB 00:00 (112/225): libseccomp-2.5.1-1.el8.x86_64.rpm 1.1 MB/s | 71 kB 00:00 (113/225): libsecret-0.18.6-1.el8.x86_64.rpm 2.6 MB/s | 163 kB 00:00 (114/225): libselinux-2.9-5.el8.x86_64.rpm 2.6 MB/s | 165 kB 00:00 (115/225): libsemanage-2.9-6.el8.x86_64.rpm 2.6 MB/s | 165 kB 00:00 (116/225): libsepol-2.9-2.el8.x86_64.rpm 5.2 MB/s | 339 kB 00:00 (117/225): libsigsegv-2.11-5.el8.x86_64.rpm 443 kB/s | 30 kB 00:00 (118/225): libsmartcols-2.32.1-27.el8.x86_64.rp 2.8 MB/s | 176 kB 00:00 (119/225): libssh-0.9.4-3.el8.x86_64.rpm 2.7 MB/s | 215 kB 00:00 (120/225): libssh-config-0.9.4-3.el8.noarch.rpm 310 kB/s | 19 kB 00:00 (121/225): libstdc++-8.5.0-1.el8.x86_64.rpm 6.6 MB/s | 452 kB 00:00 (122/225): libtasn1-4.13-3.el8.x86_64.rpm 1.2 MB/s | 76 kB 00:00 (123/225): libtirpc-1.1.4-5.el8.x86_64.rpm 1.7 MB/s | 112 kB 00:00 (124/225): libtool-ltdl-2.4.6-25.el8.x86_64.rpm 770 kB/s | 58 kB 00:00 (125/225): libunistring-0.9.9-3.el8.x86_64.rpm 6.2 MB/s | 422 kB 00:00 (126/225): libusbx-1.0.23-4.el8.x86_64.rpm 1.1 MB/s | 74 kB 00:00 (127/225): libutempter-1.1.6-14.el8.x86_64.rpm 469 kB/s | 32 kB 00:00 (128/225): libuuid-2.32.1-27.el8.x86_64.rpm 1.6 MB/s | 95 kB 00:00 (129/225): libverto-0.3.0-5.el8.x86_64.rpm 359 kB/s | 24 kB 00:00 (130/225): libxcrypt-4.1.1-6.el8.x86_64.rpm 1.2 MB/s | 73 kB 00:00 (131/225): libxcrypt-devel-4.1.1-6.el8.x86_64.r 362 kB/s | 25 kB 00:00 (132/225): libxml2-2.9.7-11.el8.x86_64.rpm 7.6 MB/s | 696 kB 00:00 (133/225): libzstd-1.4.4-1.el8.x86_64.rpm 4.0 MB/s | 266 kB 00:00 (134/225): lua-libs-5.3.4-11.el8.x86_64.rpm 1.9 MB/s | 118 kB 00:00 (135/225): lz4-libs-1.8.3-3.el8.x86_64.rpm 1.1 MB/s | 66 kB 00:00 (136/225): make-4.2.1-10.el8.x86_64.rpm 6.3 MB/s | 498 kB 00:00 (137/225): memstrack-0.1.11-1.el8.x86_64.rpm 643 kB/s | 48 kB 00:00 (138/225): mpfr-3.1.6-1.el8.x86_64.rpm 3.5 MB/s | 221 kB 00:00 (139/225): ncurses-6.1-9.20180224.el8.x86_64.rp 5.6 MB/s | 387 kB 00:00 (140/225): ncurses-base-6.1-9.20180224.el8.noar 1.2 MB/s | 81 kB 00:00 (141/225): ncurses-libs-6.1-9.20180224.el8.x86_ 4.9 MB/s | 334 kB 00:00 (142/225): nettle-3.4.1-4.el8_3.x86_64.rpm 4.6 MB/s | 301 kB 00:00 (143/225): npth-1.5-4.el8.x86_64.rpm 378 kB/s | 26 kB 00:00 (144/225): openldap-2.4.46-16.el8.x86_64.rpm 5.4 MB/s | 351 kB 00:00 (145/225): openssl-1.1.1k-1.el8.x86_64.rpm 9.4 MB/s | 707 kB 00:00 (146/225): openssl-pkcs11-0.4.10-2.el8.x86_64.r 1.0 MB/s | 66 kB 00:00 (147/225): openssl-libs-1.1.1k-1.el8.x86_64.rpm 16 MB/s | 1.5 MB 00:00 (148/225): os-prober-1.74-6.el8.x86_64.rpm 845 kB/s | 51 kB 00:00 (149/225): p11-kit-0.23.22-1.el8.x86_64.rpm 4.9 MB/s | 324 kB 00:00 (150/225): p11-kit-trust-0.23.22-1.el8.x86_64.r 2.2 MB/s | 137 kB 00:00 (151/225): pam-1.3.1-15.el8.x86_64.rpm 10 MB/s | 739 kB 00:00 (152/225): patch-2.7.6-11.el8.x86_64.rpm 2.2 MB/s | 138 kB 00:00 (153/225): pciutils-3.7.0-1.el8.x86_64.rpm 1.7 MB/s | 105 kB 00:00 (154/225): pciutils-libs-3.7.0-1.el8.x86_64.rpm 897 kB/s | 54 kB 00:00 (155/225): pcre-8.42-5.el8.0.1.x86_64.rpm 3.3 MB/s | 211 kB 00:00 (156/225): pcre2-10.32-2.el8.x86_64.rpm 3.8 MB/s | 246 kB 00:00 (157/225): pigz-2.4-4.el8.x86_64.rpm 1.3 MB/s | 79 kB 00:00 (158/225): pkgconf-1.4.2-1.el8.x86_64.rpm 633 kB/s | 38 kB 00:00 (159/225): pkgconf-m4-1.4.2-1.el8.noarch.rpm 289 kB/s | 17 kB 00:00 (160/225): pkgconf-pkg-config-1.4.2-1.el8.x86_6 255 kB/s | 15 kB 00:00 (161/225): platform-python-3.6.8-38.el8.x86_64. 1.4 MB/s | 84 kB 00:00 (162/225): platform-python-setuptools-39.2.0-6. 9.1 MB/s | 632 kB 00:00 (163/225): popt-1.18-1.el8.x86_64.rpm 1.0 MB/s | 61 kB 00:00 (164/225): platform-python-pip-9.0.3-19.el8.noa 13 MB/s | 1.7 MB 00:00 (165/225): procps-ng-3.3.15-6.el8.x86_64.rpm 5.0 MB/s | 329 kB 00:00 (166/225): publicsuffix-list-dafsa-20180723-1.e 931 kB/s | 56 kB 00:00 (167/225): python3-setuptools-wheel-39.2.0-6.el 4.4 MB/s | 289 kB 00:00 (168/225): python3-pip-wheel-9.0.3-19.el8.noarc 13 MB/s | 1.0 MB 00:00 (169/225): rdma-core-35.0-1.el8.x86_64.rpm 983 kB/s | 59 kB 00:00 (170/225): readline-7.0-10.el8.x86_64.rpm 3.0 MB/s | 199 kB 00:00 (171/225): rpm-4.14.3-14.el8_4.x86_64.rpm 7.7 MB/s | 542 kB 00:00 (172/225): rpm-build-libs-4.14.3-14.el8_4.x86_6 2.1 MB/s | 155 kB 00:00 (173/225): 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15 kB 00:00 (218/225): python-srpm-macros-3-41.el8.noarch.r 244 kB/s | 15 kB 00:00 (219/225): python3-rpm-macros-3-41.el8.noarch.r 240 kB/s | 14 kB 00:00 (220/225): qt5-srpm-macros-5.15.2-1.el8.noarch. 150 kB/s | 11 kB 00:00 (221/225): redhat-rpm-config-125-1.el8.noarch.r 1.4 MB/s | 86 kB 00:00 (222/225): rpm-build-4.14.3-14.el8_4.x86_64.rpm 2.3 MB/s | 173 kB 00:00 (223/225): rust-srpm-macros-5-2.el8.noarch.rpm 128 kB/s | 9.2 kB 00:00 (224/225): xkeyboard-config-2.28-1.el8.noarch.r 11 MB/s | 782 kB 00:00 (225/225): zstd-1.4.4-1.el8.x86_64.rpm 5.2 MB/s | 393 kB 00:00 -------------------------------------------------------------------------------- Total 23 MB/s | 181 MB 00:07 warning: /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/cache/dnf/Stream-BaseOS-8470e1c6c4b81471/packages/acl-2.2.53-1.el8.x86_64.rpm: Header V3 RSA/SHA256 Signature, key ID 8483c65d: NOKEY CentOS-Stream - Base 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x8483C65D: Userid : "CentOS (CentOS Official Signing Key) " Fingerprint: 99DB 70FA E1D7 CE22 7FB6 4882 05B5 55B3 8483 C65D From : /usr/share/distribution-gpg-keys/centos/RPM-GPG-KEY-CentOS-Official Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.8-3.el8.x86_64 1/1 Preparing : 1/1 Installing : libgcc-8.5.0-1.el8.x86_64 1/225 Running scriptlet: libgcc-8.5.0-1.el8.x86_64 1/225 Installing : python-srpm-macros-3-41.el8.noarch 2/225 Installing : python3-setuptools-wheel-39.2.0-6.el8.noarch 3/225 Installing : python3-pip-wheel-9.0.3-19.el8.noarch 4/225 Installing : python-rpm-macros-3-41.el8.noarch 5/225 Installing : python3-rpm-macros-3-41.el8.noarch 6/225 Installing : xkeyboard-config-2.28-1.el8.noarch 7/225 Installing : rust-srpm-macros-5-2.el8.noarch 8/225 Installing : qt5-srpm-macros-5.15.2-1.el8.noarch 9/225 Installing : perl-srpm-macros-1-25.el8.noarch 10/225 Installing : openblas-srpm-macros-2-2.el8.noarch 11/225 Installing : ocaml-srpm-macros-5-4.el8.noarch 12/225 Installing : go-srpm-macros-2-17.el8.noarch 13/225 Installing : ghc-srpm-macros-1.4.2-7.el8.noarch 14/225 Installing : tzdata-2021a-1.el8.noarch 15/225 Installing : publicsuffix-list-dafsa-20180723-1.el8.noarch 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Installing : libcap-2.26-4.el8.x86_64 46/225 Installing : libgpg-error-1.31-1.el8.x86_64 47/225 Installing : libxcrypt-4.1.1-6.el8.x86_64 48/225 Installing : readline-7.0-10.el8.x86_64 49/225 Running scriptlet: readline-7.0-10.el8.x86_64 49/225 Installing : mpfr-3.1.6-1.el8.x86_64 50/225 Running scriptlet: mpfr-3.1.6-1.el8.x86_64 50/225 Installing : libunistring-0.9.9-3.el8.x86_64 51/225 Installing : libuuid-2.32.1-27.el8.x86_64 52/225 Running scriptlet: libuuid-2.32.1-27.el8.x86_64 52/225 Installing : libzstd-1.4.4-1.el8.x86_64 53/225 Installing : popt-1.18-1.el8.x86_64 54/225 Installing : chkconfig-1.13-2.el8.x86_64 55/225 Installing : libgcrypt-1.8.5-5.el8.x86_64 56/225 Running scriptlet: libgcrypt-1.8.5-5.el8.x86_64 56/225 Installing : libxml2-2.9.7-11.el8.x86_64 57/225 Installing : libattr-2.4.48-3.el8.x86_64 58/225 Installing : libacl-2.2.53-1.el8.x86_64 59/225 Installing : sed-4.5-2.el8.x86_64 60/225 Running scriptlet: sed-4.5-2.el8.x86_64 60/225 Installing : libcom_err-1.45.6-1.el8.x86_64 61/225 Running scriptlet: libcom_err-1.45.6-1.el8.x86_64 61/225 Installing : libidn2-2.2.0-1.el8.x86_64 62/225 Installing : findutils-1:4.6.0-20.el8.x86_64 63/225 Running scriptlet: findutils-1:4.6.0-20.el8.x86_64 63/225 Installing : expat-2.2.5-4.el8.x86_64 64/225 Installing : libffi-3.1-22.el8.x86_64 65/225 Installing : lua-libs-5.3.4-11.el8.x86_64 66/225 Installing : p11-kit-0.23.22-1.el8.x86_64 67/225 Installing : libmpc-1.1.0-9.1.el8.x86_64 68/225 Installing : libassuan-2.5.1-3.el8.x86_64 69/225 Installing : libgomp-8.5.0-1.el8.x86_64 70/225 Running scriptlet: libgomp-8.5.0-1.el8.x86_64 70/225 Installing : file-libs-5.33-20.el8.x86_64 71/225 Installing : file-5.33-20.el8.x86_64 72/225 Installing : libcap-ng-0.7.9-5.el8.x86_64 73/225 Installing : audit-libs-3.0-0.17.20191104git1c2f876.el8.x86_6 74/225 Installing : lz4-libs-1.8.3-3.el8.x86_64 75/225 Installing : libksba-1.3.5-7.el8.x86_64 76/225 Installing : unzip-6.0-45.el8.x86_64 77/225 Installing : 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crypto-policies-20210209-1.gitbfb6bed.el8_3.noar 154/225 Running scriptlet: crypto-policies-20210209-1.gitbfb6bed.el8_3.noar 154/225 Installing : elfutils-default-yama-scope-0.182-3.el8.noarch 155/225 Running scriptlet: elfutils-default-yama-scope-0.182-3.el8.noarch 155/225 Installing : gzip-1.9-12.el8.x86_64 156/225 Running scriptlet: gzip-1.9-12.el8.x86_64 156/225 Installing : cracklib-2.9.6-15.el8.x86_64 157/225 Installing : cracklib-dicts-2.9.6-15.el8.x86_64 158/225 Installing : procps-ng-3.3.15-6.el8.x86_64 159/225 Installing : krb5-libs-1.18.2-10.el8.x86_64 160/225 Installing : libtirpc-1.1.4-5.el8.x86_64 161/225 Running scriptlet: libtirpc-1.1.4-5.el8.x86_64 161/225 Installing : libnsl2-1.2.0-2.20180605git4a062cf.el8.x86_64 162/225 Running scriptlet: libnsl2-1.2.0-2.20180605git4a062cf.el8.x86_64 162/225 Installing : kpartx-0.8.4-13.el8.x86_64 163/225 Installing : device-mapper-8:1.02.175-5.el8.x86_64 164/225 Installing : elfutils-debuginfod-client-0.182-3.el8.x86_64 165/225 Installing : elfutils-libs-0.182-3.el8.x86_64 166/225 Installing : openssl-pkcs11-0.4.10-2.el8.x86_64 167/225 Installing : rpm-4.14.3-14.el8_4.x86_64 168/225 Installing : gettext-libs-0.19.8.1-17.el8.x86_64 169/225 Installing : libcroco-0.6.12-4.el8_2.1.x86_64 170/225 Running scriptlet: libcroco-0.6.12-4.el8_2.1.x86_64 170/225 Installing : libfdisk-2.32.1-27.el8.x86_64 171/225 Running scriptlet: libfdisk-2.32.1-27.el8.x86_64 171/225 Installing : libmount-2.32.1-27.el8.x86_64 172/225 Running scriptlet: libmount-2.32.1-27.el8.x86_64 172/225 Installing : dbus-libs-1:1.12.8-14.el8.x86_64 173/225 Running scriptlet: dbus-libs-1:1.12.8-14.el8.x86_64 173/225 Installing : dbus-tools-1:1.12.8-14.el8.x86_64 174/225 Installing : coreutils-8.30-9.el8.x86_64 175/225 Installing : systemd-libs-239-45.el8.x86_64 176/225 Running scriptlet: systemd-libs-239-45.el8.x86_64 176/225 Installing : libblkid-2.32.1-27.el8.x86_64 177/225 Running scriptlet: libblkid-2.32.1-27.el8.x86_64 177/225 Installing : device-mapper-libs-8:1.02.175-5.el8.x86_64 178/225 Installing : shadow-utils-2:4.6-13.el8.x86_64 179/225 Running scriptlet: ca-certificates-2020.2.41-80.0.el8_2.noarch 180/225 Installing : ca-certificates-2020.2.41-80.0.el8_2.noarch 180/225 Running scriptlet: ca-certificates-2020.2.41-80.0.el8_2.noarch 180/225 Installing : openssl-libs-1:1.1.1k-1.el8.x86_64 181/225 Running scriptlet: openssl-libs-1:1.1.1k-1.el8.x86_64 181/225 Installing : libdb-5.3.28-40.el8.x86_64 182/225 Running scriptlet: libdb-5.3.28-40.el8.x86_64 182/225 Installing : rpm-libs-4.14.3-14.el8_4.x86_64 183/225 Running scriptlet: rpm-libs-4.14.3-14.el8_4.x86_64 183/225 Installing : kmod-libs-25-17.el8.x86_64 184/225 Running scriptlet: kmod-libs-25-17.el8.x86_64 184/225 Installing : kmod-25-17.el8.x86_64 185/225 Installing : cryptsetup-libs-2.3.3-4.el8.x86_64 186/225 Running scriptlet: cryptsetup-libs-2.3.3-4.el8.x86_64 186/225 Installing : trousers-lib-0.3.15-1.el8.x86_64 187/225 Running scriptlet: trousers-lib-0.3.15-1.el8.x86_64 187/225 Running scriptlet: dbus-daemon-1:1.12.8-14.el8.x86_64 188/225 Installing : dbus-daemon-1:1.12.8-14.el8.x86_64 188/225 Running scriptlet: dbus-daemon-1:1.12.8-14.el8.x86_64 188/225 Running scriptlet: libutempter-1.1.6-14.el8.x86_64 189/225 Installing : libutempter-1.1.6-14.el8.x86_64 189/225 Installing : kbd-2.0.4-10.el8.x86_64 190/225 Installing : libpwquality-1.4.4-3.el8.x86_64 191/225 Installing : pam-1.3.1-15.el8.x86_64 192/225 Running scriptlet: pam-1.3.1-15.el8.x86_64 192/225 Installing : util-linux-2.32.1-27.el8.x86_64 193/225 Running scriptlet: util-linux-2.32.1-27.el8.x86_64 193/225 Installing : systemd-pam-239-45.el8.x86_64 194/225 Installing : dracut-049-136.git20210426.el8.x86_64 195/225 Installing : os-prober-1.74-6.el8.x86_64 196/225 Installing : gettext-0.19.8.1-17.el8.x86_64 197/225 Running scriptlet: gettext-0.19.8.1-17.el8.x86_64 197/225 Running scriptlet: grub2-tools-1:2.02-99.el8.x86_64 198/225 Installing : grub2-tools-1:2.02-99.el8.x86_64 198/225 Running scriptlet: grub2-tools-1:2.02-99.el8.x86_64 198/225 Installing : glib2-2.56.4-13.el8.x86_64 199/225 Installing : shared-mime-info-1.9-3.el8.x86_64 200/225 Running scriptlet: shared-mime-info-1.9-3.el8.x86_64 200/225 Installing : gnutls-3.6.14-8.el8_3.x86_64 201/225 Installing : dbus-1:1.12.8-14.el8.x86_64 202/225 Running scriptlet: systemd-239-45.el8.x86_64 203/225 Installing : systemd-239-45.el8.x86_64 203/225 Running scriptlet: systemd-239-45.el8.x86_64 203/225 Installing : systemd-udev-239-45.el8.x86_64 204/225 Running scriptlet: systemd-udev-239-45.el8.x86_64 204/225 Running scriptlet: trousers-0.3.15-1.el8.x86_64 205/225 Installing : trousers-0.3.15-1.el8.x86_64 205/225 Running scriptlet: trousers-0.3.15-1.el8.x86_64 205/225 Installing : binutils-2.30-102.el8.x86_64 206/225 Running scriptlet: binutils-2.30-102.el8.x86_64 206/225 Installing : gcc-8.5.0-1.el8.x86_64 207/225 Running scriptlet: gcc-8.5.0-1.el8.x86_64 207/225 Installing : annobin-9.65-1.el8.0.1.x86_64 208/225 Installing : libbabeltrace-1.5.4-3.el8.x86_64 209/225 Running scriptlet: libbabeltrace-1.5.4-3.el8.x86_64 209/225 Installing : libsecret-0.18.6-1.el8.x86_64 210/225 Installing : pinentry-1.1.0-2.el8.x86_64 211/225 Running scriptlet: pinentry-1.1.0-2.el8.x86_64 211/225 Running scriptlet: tpm2-tss-2.3.2-4.el8.x86_64 212/225 Installing : tpm2-tss-2.3.2-4.el8.x86_64 212/225 Running scriptlet: tpm2-tss-2.3.2-4.el8.x86_64 212/225 Installing : ima-evm-utils-1.3.2-12.el8.x86_64 213/225 Installing : libusbx-1.0.23-4.el8.x86_64 214/225 Installing : gnupg2-smime-2.2.20-2.el8.x86_64 215/225 Installing : gnupg2-2.2.20-2.el8.x86_64 216/225 Installing : rpm-build-libs-4.14.3-14.el8_4.x86_64 217/225 Running scriptlet: rpm-build-libs-4.14.3-14.el8_4.x86_64 217/225 Installing : guile-5:2.0.14-7.el8.x86_64 218/225 Running scriptlet: guile-5:2.0.14-7.el8.x86_64 218/225 Installing : gdb-headless-8.2-15.el8.x86_64 219/225 Installing : efi-srpm-macros-3-3.el8.noarch 220/225 Installing : redhat-rpm-config-125-1.el8.noarch 221/225 Installing : elfutils-0.182-3.el8.x86_64 222/225 Installing : rpm-build-4.14.3-14.el8_4.x86_64 223/225 Installing : gcc-c++-8.5.0-1.el8.x86_64 224/225 Installing : make-1:4.2.1-10.el8.x86_64 225/225 Running scriptlet: make-1:4.2.1-10.el8.x86_64 225/225 Running scriptlet: filesystem-3.8-3.el8.x86_64 225/225 Running scriptlet: glibc-all-langpacks-2.28-158.el8.x86_64 225/225 Running scriptlet: crypto-policies-scripts-20210209-1.gitbfb6bed.el 225/225 Running scriptlet: ca-certificates-2020.2.41-80.0.el8_2.noarch 225/225 Running scriptlet: guile-5:2.0.14-7.el8.x86_64 225/225 Running scriptlet: make-1:4.2.1-10.el8.x86_64 225/225 Verifying : acl-2.2.53-1.el8.x86_64 1/225 Verifying : audit-libs-3.0-0.17.20191104git1c2f876.el8.x86_6 2/225 Verifying : basesystem-11-5.el8.noarch 3/225 Verifying : bash-4.4.20-1.el8_4.x86_64 4/225 Verifying : binutils-2.30-102.el8.x86_64 5/225 Verifying : brotli-1.0.6-3.el8.x86_64 6/225 Verifying : bzip2-1.0.6-26.el8.x86_64 7/225 Verifying : bzip2-libs-1.0.6-26.el8.x86_64 8/225 Verifying : ca-certificates-2020.2.41-80.0.el8_2.noarch 9/225 Verifying : centos-gpg-keys-1:8-2.el8.noarch 10/225 Verifying : centos-stream-release-8.5-3.el8.noarch 11/225 Verifying : centos-stream-repos-8-2.el8.noarch 12/225 Verifying : chkconfig-1.13-2.el8.x86_64 13/225 Verifying : coreutils-8.30-9.el8.x86_64 14/225 Verifying : coreutils-common-8.30-9.el8.x86_64 15/225 Verifying : cpio-2.12-10.el8.x86_64 16/225 Verifying : cracklib-2.9.6-15.el8.x86_64 17/225 Verifying : cracklib-dicts-2.9.6-15.el8.x86_64 18/225 Verifying : crypto-policies-20210209-1.gitbfb6bed.el8_3.noar 19/225 Verifying : crypto-policies-scripts-20210209-1.gitbfb6bed.el 20/225 Verifying : cryptsetup-libs-2.3.3-4.el8.x86_64 21/225 Verifying : curl-7.61.1-18.el8.x86_64 22/225 Verifying : cyrus-sasl-lib-2.1.27-5.el8.x86_64 23/225 Verifying : dbus-1:1.12.8-14.el8.x86_64 24/225 Verifying : dbus-common-1:1.12.8-14.el8.noarch 25/225 Verifying : dbus-daemon-1:1.12.8-14.el8.x86_64 26/225 Verifying : dbus-libs-1:1.12.8-14.el8.x86_64 27/225 Verifying : dbus-tools-1:1.12.8-14.el8.x86_64 28/225 Verifying : device-mapper-8:1.02.175-5.el8.x86_64 29/225 Verifying : device-mapper-libs-8:1.02.175-5.el8.x86_64 30/225 Verifying : diffutils-3.6-6.el8.x86_64 31/225 Verifying : dracut-049-136.git20210426.el8.x86_64 32/225 Verifying : elfutils-0.182-3.el8.x86_64 33/225 Verifying : elfutils-debuginfod-client-0.182-3.el8.x86_64 34/225 Verifying : elfutils-default-yama-scope-0.182-3.el8.noarch 35/225 Verifying : elfutils-libelf-0.182-3.el8.x86_64 36/225 Verifying : elfutils-libs-0.182-3.el8.x86_64 37/225 Verifying : expat-2.2.5-4.el8.x86_64 38/225 Verifying : file-5.33-20.el8.x86_64 39/225 Verifying : file-libs-5.33-20.el8.x86_64 40/225 Verifying : filesystem-3.8-3.el8.x86_64 41/225 Verifying : findutils-1:4.6.0-20.el8.x86_64 42/225 Verifying : gawk-4.2.1-2.el8.x86_64 43/225 Verifying : gdbm-1:1.18-1.el8.x86_64 44/225 Verifying : gdbm-libs-1:1.18-1.el8.x86_64 45/225 Verifying : gettext-0.19.8.1-17.el8.x86_64 46/225 Verifying : gettext-libs-0.19.8.1-17.el8.x86_64 47/225 Verifying : glib2-2.56.4-13.el8.x86_64 48/225 Verifying : glibc-2.28-158.el8.x86_64 49/225 Verifying : glibc-all-langpacks-2.28-158.el8.x86_64 50/225 Verifying : glibc-common-2.28-158.el8.x86_64 51/225 Verifying : glibc-devel-2.28-158.el8.x86_64 52/225 Verifying : glibc-headers-2.28-158.el8.x86_64 53/225 Verifying : gmp-1:6.1.2-10.el8.x86_64 54/225 Verifying : gnupg2-2.2.20-2.el8.x86_64 55/225 Verifying : gnupg2-smime-2.2.20-2.el8.x86_64 56/225 Verifying : gnutls-3.6.14-8.el8_3.x86_64 57/225 Verifying : grep-3.1-6.el8.x86_64 58/225 Verifying : grub2-common-1:2.02-99.el8.noarch 59/225 Verifying : grub2-tools-1:2.02-99.el8.x86_64 60/225 Verifying : grub2-tools-minimal-1:2.02-99.el8.x86_64 61/225 Verifying : grubby-8.40-41.el8.x86_64 62/225 Verifying : gzip-1.9-12.el8.x86_64 63/225 Verifying : hardlink-1:1.3-6.el8.x86_64 64/225 Verifying : hwdata-0.314-8.8.el8.noarch 65/225 Verifying : ima-evm-utils-1.3.2-12.el8.x86_64 66/225 Verifying : info-6.5-6.el8.x86_64 67/225 Verifying : iptables-libs-1.8.4-17.el8.x86_64 68/225 Verifying : json-c-0.13.1-2.el8.x86_64 69/225 Verifying : kbd-2.0.4-10.el8.x86_64 70/225 Verifying : kbd-legacy-2.0.4-10.el8.noarch 71/225 Verifying : kbd-misc-2.0.4-10.el8.noarch 72/225 Verifying : kernel-headers-4.18.0-305.3.1.el8.x86_64 73/225 Verifying : keyutils-libs-1.5.10-6.el8.x86_64 74/225 Verifying : kmod-25-17.el8.x86_64 75/225 Verifying : kmod-libs-25-17.el8.x86_64 76/225 Verifying : kpartx-0.8.4-13.el8.x86_64 77/225 Verifying : krb5-libs-1.18.2-10.el8.x86_64 78/225 Verifying : libacl-2.2.53-1.el8.x86_64 79/225 Verifying : libarchive-3.3.3-1.el8.x86_64 80/225 Verifying : libassuan-2.5.1-3.el8.x86_64 81/225 Verifying : libattr-2.4.48-3.el8.x86_64 82/225 Verifying : libbabeltrace-1.5.4-3.el8.x86_64 83/225 Verifying : libblkid-2.32.1-27.el8.x86_64 84/225 Verifying : libcap-2.26-4.el8.x86_64 85/225 Verifying : libcap-ng-0.7.9-5.el8.x86_64 86/225 Verifying : libcom_err-1.45.6-1.el8.x86_64 87/225 Verifying : libcroco-0.6.12-4.el8_2.1.x86_64 88/225 Verifying : libcurl-7.61.1-18.el8.x86_64 89/225 Verifying : libdb-5.3.28-40.el8.x86_64 90/225 Verifying : libdb-utils-5.3.28-40.el8.x86_64 91/225 Verifying : libfdisk-2.32.1-27.el8.x86_64 92/225 Verifying : libffi-3.1-22.el8.x86_64 93/225 Verifying : libgcc-8.5.0-1.el8.x86_64 94/225 Verifying : libgcrypt-1.8.5-5.el8.x86_64 95/225 Verifying : libgomp-8.5.0-1.el8.x86_64 96/225 Verifying : libgpg-error-1.31-1.el8.x86_64 97/225 Verifying : libibverbs-35.0-1.el8.x86_64 98/225 Verifying : libidn2-2.2.0-1.el8.x86_64 99/225 Verifying : libkcapi-1.2.0-2.el8.x86_64 100/225 Verifying : libkcapi-hmaccalc-1.2.0-2.el8.x86_64 101/225 Verifying : libksba-1.3.5-7.el8.x86_64 102/225 Verifying : libmetalink-0.1.3-7.el8.x86_64 103/225 Verifying : libmount-2.32.1-27.el8.x86_64 104/225 Verifying : libnghttp2-1.33.0-3.el8_2.1.x86_64 105/225 Verifying : libnl3-3.5.0-1.el8.x86_64 106/225 Verifying : libnsl2-1.2.0-2.20180605git4a062cf.el8.x86_64 107/225 Verifying : libpcap-14:1.9.1-5.el8.x86_64 108/225 Verifying : libpkgconf-1.4.2-1.el8.x86_64 109/225 Verifying : libpsl-0.20.2-6.el8.x86_64 110/225 Verifying : libpwquality-1.4.4-3.el8.x86_64 111/225 Verifying : libseccomp-2.5.1-1.el8.x86_64 112/225 Verifying : libsecret-0.18.6-1.el8.x86_64 113/225 Verifying : libselinux-2.9-5.el8.x86_64 114/225 Verifying : libsemanage-2.9-6.el8.x86_64 115/225 Verifying : libsepol-2.9-2.el8.x86_64 116/225 Verifying : libsigsegv-2.11-5.el8.x86_64 117/225 Verifying : libsmartcols-2.32.1-27.el8.x86_64 118/225 Verifying : libssh-0.9.4-3.el8.x86_64 119/225 Verifying : libssh-config-0.9.4-3.el8.noarch 120/225 Verifying : libstdc++-8.5.0-1.el8.x86_64 121/225 Verifying : libtasn1-4.13-3.el8.x86_64 122/225 Verifying : libtirpc-1.1.4-5.el8.x86_64 123/225 Verifying : libtool-ltdl-2.4.6-25.el8.x86_64 124/225 Verifying : libunistring-0.9.9-3.el8.x86_64 125/225 Verifying : libusbx-1.0.23-4.el8.x86_64 126/225 Verifying : libutempter-1.1.6-14.el8.x86_64 127/225 Verifying : libuuid-2.32.1-27.el8.x86_64 128/225 Verifying : libverto-0.3.0-5.el8.x86_64 129/225 Verifying : libxcrypt-4.1.1-6.el8.x86_64 130/225 Verifying : libxcrypt-devel-4.1.1-6.el8.x86_64 131/225 Verifying : libxml2-2.9.7-11.el8.x86_64 132/225 Verifying : libzstd-1.4.4-1.el8.x86_64 133/225 Verifying : lua-libs-5.3.4-11.el8.x86_64 134/225 Verifying : lz4-libs-1.8.3-3.el8.x86_64 135/225 Verifying : make-1:4.2.1-10.el8.x86_64 136/225 Verifying : memstrack-0.1.11-1.el8.x86_64 137/225 Verifying : mpfr-3.1.6-1.el8.x86_64 138/225 Verifying : ncurses-6.1-9.20180224.el8.x86_64 139/225 Verifying : ncurses-base-6.1-9.20180224.el8.noarch 140/225 Verifying : ncurses-libs-6.1-9.20180224.el8.x86_64 141/225 Verifying : nettle-3.4.1-4.el8_3.x86_64 142/225 Verifying : npth-1.5-4.el8.x86_64 143/225 Verifying : openldap-2.4.46-16.el8.x86_64 144/225 Verifying : openssl-1:1.1.1k-1.el8.x86_64 145/225 Verifying : openssl-libs-1:1.1.1k-1.el8.x86_64 146/225 Verifying : openssl-pkcs11-0.4.10-2.el8.x86_64 147/225 Verifying : os-prober-1.74-6.el8.x86_64 148/225 Verifying : p11-kit-0.23.22-1.el8.x86_64 149/225 Verifying : p11-kit-trust-0.23.22-1.el8.x86_64 150/225 Verifying : pam-1.3.1-15.el8.x86_64 151/225 Verifying : patch-2.7.6-11.el8.x86_64 152/225 Verifying : pciutils-3.7.0-1.el8.x86_64 153/225 Verifying : pciutils-libs-3.7.0-1.el8.x86_64 154/225 Verifying : pcre-8.42-5.el8.0.1.x86_64 155/225 Verifying : pcre2-10.32-2.el8.x86_64 156/225 Verifying : pigz-2.4-4.el8.x86_64 157/225 Verifying : pkgconf-1.4.2-1.el8.x86_64 158/225 Verifying : pkgconf-m4-1.4.2-1.el8.noarch 159/225 Verifying : pkgconf-pkg-config-1.4.2-1.el8.x86_64 160/225 Verifying : platform-python-3.6.8-38.el8.x86_64 161/225 Verifying : platform-python-pip-9.0.3-19.el8.noarch 162/225 Verifying : platform-python-setuptools-39.2.0-6.el8.noarch 163/225 Verifying : popt-1.18-1.el8.x86_64 164/225 Verifying : procps-ng-3.3.15-6.el8.x86_64 165/225 Verifying : publicsuffix-list-dafsa-20180723-1.el8.noarch 166/225 Verifying : python3-libs-3.6.8-38.el8.x86_64 167/225 Verifying : python3-pip-wheel-9.0.3-19.el8.noarch 168/225 Verifying : python3-setuptools-wheel-39.2.0-6.el8.noarch 169/225 Verifying : rdma-core-35.0-1.el8.x86_64 170/225 Verifying : readline-7.0-10.el8.x86_64 171/225 Verifying : rpm-4.14.3-14.el8_4.x86_64 172/225 Verifying : rpm-build-libs-4.14.3-14.el8_4.x86_64 173/225 Verifying : rpm-libs-4.14.3-14.el8_4.x86_64 174/225 Verifying : sed-4.5-2.el8.x86_64 175/225 Verifying : setup-2.12.2-6.el8.noarch 176/225 Verifying : shadow-utils-2:4.6-13.el8.x86_64 177/225 Verifying : shared-mime-info-1.9-3.el8.x86_64 178/225 Verifying : sqlite-libs-3.26.0-15.el8.x86_64 179/225 Verifying : systemd-239-45.el8.x86_64 180/225 Verifying : systemd-libs-239-45.el8.x86_64 181/225 Verifying : systemd-pam-239-45.el8.x86_64 182/225 Verifying : systemd-udev-239-45.el8.x86_64 183/225 Verifying : tar-2:1.30-5.el8.x86_64 184/225 Verifying : tpm2-tss-2.3.2-4.el8.x86_64 185/225 Verifying : trousers-0.3.15-1.el8.x86_64 186/225 Verifying : trousers-lib-0.3.15-1.el8.x86_64 187/225 Verifying : tzdata-2021a-1.el8.noarch 188/225 Verifying : unzip-6.0-45.el8.x86_64 189/225 Verifying : util-linux-2.32.1-27.el8.x86_64 190/225 Verifying : which-2.21-16.el8.x86_64 191/225 Verifying : xz-5.2.4-3.el8.x86_64 192/225 Verifying : xz-libs-5.2.4-3.el8.x86_64 193/225 Verifying : zip-3.0-23.el8.x86_64 194/225 Verifying : zlib-1.2.11-17.el8.x86_64 195/225 Verifying : annobin-9.65-1.el8.0.1.x86_64 196/225 Verifying : cpp-8.5.0-1.el8.x86_64 197/225 Verifying : dwz-0.12-9.el8.x86_64 198/225 Verifying : efi-srpm-macros-3-3.el8.noarch 199/225 Verifying : gc-7.6.4-3.el8.x86_64 200/225 Verifying : gcc-8.5.0-1.el8.x86_64 201/225 Verifying : gcc-c++-8.5.0-1.el8.x86_64 202/225 Verifying : gdb-headless-8.2-15.el8.x86_64 203/225 Verifying : ghc-srpm-macros-1.4.2-7.el8.noarch 204/225 Verifying : go-srpm-macros-2-17.el8.noarch 205/225 Verifying : guile-5:2.0.14-7.el8.x86_64 206/225 Verifying : isl-0.16.1-6.el8.x86_64 207/225 Verifying : libatomic_ops-7.6.2-3.el8.x86_64 208/225 Verifying : libipt-1.6.1-8.el8.x86_64 209/225 Verifying : libmpc-1.1.0-9.1.el8.x86_64 210/225 Verifying : libstdc++-devel-8.5.0-1.el8.x86_64 211/225 Verifying : libxkbcommon-0.9.1-1.el8.x86_64 212/225 Verifying : ocaml-srpm-macros-5-4.el8.noarch 213/225 Verifying : openblas-srpm-macros-2-2.el8.noarch 214/225 Verifying : perl-srpm-macros-1-25.el8.noarch 215/225 Verifying : pinentry-1.1.0-2.el8.x86_64 216/225 Verifying : python-rpm-macros-3-41.el8.noarch 217/225 Verifying : python-srpm-macros-3-41.el8.noarch 218/225 Verifying : python3-rpm-macros-3-41.el8.noarch 219/225 Verifying : qt5-srpm-macros-5.15.2-1.el8.noarch 220/225 Verifying : redhat-rpm-config-125-1.el8.noarch 221/225 Verifying : rpm-build-4.14.3-14.el8_4.x86_64 222/225 Verifying : rust-srpm-macros-5-2.el8.noarch 223/225 Verifying : xkeyboard-config-2.28-1.el8.noarch 224/225 Verifying : zstd-1.4.4-1.el8.x86_64 225/225 Installed: acl-2.2.53-1.el8.x86_64 annobin-9.65-1.el8.0.1.x86_64 audit-libs-3.0-0.17.20191104git1c2f876.el8.x86_64 basesystem-11-5.el8.noarch bash-4.4.20-1.el8_4.x86_64 binutils-2.30-102.el8.x86_64 brotli-1.0.6-3.el8.x86_64 bzip2-1.0.6-26.el8.x86_64 bzip2-libs-1.0.6-26.el8.x86_64 ca-certificates-2020.2.41-80.0.el8_2.noarch centos-gpg-keys-1:8-2.el8.noarch centos-stream-release-8.5-3.el8.noarch centos-stream-repos-8-2.el8.noarch chkconfig-1.13-2.el8.x86_64 coreutils-8.30-9.el8.x86_64 coreutils-common-8.30-9.el8.x86_64 cpio-2.12-10.el8.x86_64 cpp-8.5.0-1.el8.x86_64 cracklib-2.9.6-15.el8.x86_64 cracklib-dicts-2.9.6-15.el8.x86_64 crypto-policies-20210209-1.gitbfb6bed.el8_3.noarch crypto-policies-scripts-20210209-1.gitbfb6bed.el8_3.noarch cryptsetup-libs-2.3.3-4.el8.x86_64 curl-7.61.1-18.el8.x86_64 cyrus-sasl-lib-2.1.27-5.el8.x86_64 dbus-1:1.12.8-14.el8.x86_64 dbus-common-1:1.12.8-14.el8.noarch dbus-daemon-1:1.12.8-14.el8.x86_64 dbus-libs-1:1.12.8-14.el8.x86_64 dbus-tools-1:1.12.8-14.el8.x86_64 device-mapper-8:1.02.175-5.el8.x86_64 device-mapper-libs-8:1.02.175-5.el8.x86_64 diffutils-3.6-6.el8.x86_64 dracut-049-136.git20210426.el8.x86_64 dwz-0.12-9.el8.x86_64 efi-srpm-macros-3-3.el8.noarch elfutils-0.182-3.el8.x86_64 elfutils-debuginfod-client-0.182-3.el8.x86_64 elfutils-default-yama-scope-0.182-3.el8.noarch elfutils-libelf-0.182-3.el8.x86_64 elfutils-libs-0.182-3.el8.x86_64 expat-2.2.5-4.el8.x86_64 file-5.33-20.el8.x86_64 file-libs-5.33-20.el8.x86_64 filesystem-3.8-3.el8.x86_64 findutils-1:4.6.0-20.el8.x86_64 gawk-4.2.1-2.el8.x86_64 gc-7.6.4-3.el8.x86_64 gcc-8.5.0-1.el8.x86_64 gcc-c++-8.5.0-1.el8.x86_64 gdb-headless-8.2-15.el8.x86_64 gdbm-1:1.18-1.el8.x86_64 gdbm-libs-1:1.18-1.el8.x86_64 gettext-0.19.8.1-17.el8.x86_64 gettext-libs-0.19.8.1-17.el8.x86_64 ghc-srpm-macros-1.4.2-7.el8.noarch glib2-2.56.4-13.el8.x86_64 glibc-2.28-158.el8.x86_64 glibc-all-langpacks-2.28-158.el8.x86_64 glibc-common-2.28-158.el8.x86_64 glibc-devel-2.28-158.el8.x86_64 glibc-headers-2.28-158.el8.x86_64 gmp-1:6.1.2-10.el8.x86_64 gnupg2-2.2.20-2.el8.x86_64 gnupg2-smime-2.2.20-2.el8.x86_64 gnutls-3.6.14-8.el8_3.x86_64 go-srpm-macros-2-17.el8.noarch grep-3.1-6.el8.x86_64 grub2-common-1:2.02-99.el8.noarch grub2-tools-1:2.02-99.el8.x86_64 grub2-tools-minimal-1:2.02-99.el8.x86_64 grubby-8.40-41.el8.x86_64 guile-5:2.0.14-7.el8.x86_64 gzip-1.9-12.el8.x86_64 hardlink-1:1.3-6.el8.x86_64 hwdata-0.314-8.8.el8.noarch ima-evm-utils-1.3.2-12.el8.x86_64 info-6.5-6.el8.x86_64 iptables-libs-1.8.4-17.el8.x86_64 isl-0.16.1-6.el8.x86_64 json-c-0.13.1-2.el8.x86_64 kbd-2.0.4-10.el8.x86_64 kbd-legacy-2.0.4-10.el8.noarch kbd-misc-2.0.4-10.el8.noarch kernel-headers-4.18.0-305.3.1.el8.x86_64 keyutils-libs-1.5.10-6.el8.x86_64 kmod-25-17.el8.x86_64 kmod-libs-25-17.el8.x86_64 kpartx-0.8.4-13.el8.x86_64 krb5-libs-1.18.2-10.el8.x86_64 libacl-2.2.53-1.el8.x86_64 libarchive-3.3.3-1.el8.x86_64 libassuan-2.5.1-3.el8.x86_64 libatomic_ops-7.6.2-3.el8.x86_64 libattr-2.4.48-3.el8.x86_64 libbabeltrace-1.5.4-3.el8.x86_64 libblkid-2.32.1-27.el8.x86_64 libcap-2.26-4.el8.x86_64 libcap-ng-0.7.9-5.el8.x86_64 libcom_err-1.45.6-1.el8.x86_64 libcroco-0.6.12-4.el8_2.1.x86_64 libcurl-7.61.1-18.el8.x86_64 libdb-5.3.28-40.el8.x86_64 libdb-utils-5.3.28-40.el8.x86_64 libfdisk-2.32.1-27.el8.x86_64 libffi-3.1-22.el8.x86_64 libgcc-8.5.0-1.el8.x86_64 libgcrypt-1.8.5-5.el8.x86_64 libgomp-8.5.0-1.el8.x86_64 libgpg-error-1.31-1.el8.x86_64 libibverbs-35.0-1.el8.x86_64 libidn2-2.2.0-1.el8.x86_64 libipt-1.6.1-8.el8.x86_64 libkcapi-1.2.0-2.el8.x86_64 libkcapi-hmaccalc-1.2.0-2.el8.x86_64 libksba-1.3.5-7.el8.x86_64 libmetalink-0.1.3-7.el8.x86_64 libmount-2.32.1-27.el8.x86_64 libmpc-1.1.0-9.1.el8.x86_64 libnghttp2-1.33.0-3.el8_2.1.x86_64 libnl3-3.5.0-1.el8.x86_64 libnsl2-1.2.0-2.20180605git4a062cf.el8.x86_64 libpcap-14:1.9.1-5.el8.x86_64 libpkgconf-1.4.2-1.el8.x86_64 libpsl-0.20.2-6.el8.x86_64 libpwquality-1.4.4-3.el8.x86_64 libseccomp-2.5.1-1.el8.x86_64 libsecret-0.18.6-1.el8.x86_64 libselinux-2.9-5.el8.x86_64 libsemanage-2.9-6.el8.x86_64 libsepol-2.9-2.el8.x86_64 libsigsegv-2.11-5.el8.x86_64 libsmartcols-2.32.1-27.el8.x86_64 libssh-0.9.4-3.el8.x86_64 libssh-config-0.9.4-3.el8.noarch libstdc++-8.5.0-1.el8.x86_64 libstdc++-devel-8.5.0-1.el8.x86_64 libtasn1-4.13-3.el8.x86_64 libtirpc-1.1.4-5.el8.x86_64 libtool-ltdl-2.4.6-25.el8.x86_64 libunistring-0.9.9-3.el8.x86_64 libusbx-1.0.23-4.el8.x86_64 libutempter-1.1.6-14.el8.x86_64 libuuid-2.32.1-27.el8.x86_64 libverto-0.3.0-5.el8.x86_64 libxcrypt-4.1.1-6.el8.x86_64 libxcrypt-devel-4.1.1-6.el8.x86_64 libxkbcommon-0.9.1-1.el8.x86_64 libxml2-2.9.7-11.el8.x86_64 libzstd-1.4.4-1.el8.x86_64 lua-libs-5.3.4-11.el8.x86_64 lz4-libs-1.8.3-3.el8.x86_64 make-1:4.2.1-10.el8.x86_64 memstrack-0.1.11-1.el8.x86_64 mpfr-3.1.6-1.el8.x86_64 ncurses-6.1-9.20180224.el8.x86_64 ncurses-base-6.1-9.20180224.el8.noarch ncurses-libs-6.1-9.20180224.el8.x86_64 nettle-3.4.1-4.el8_3.x86_64 npth-1.5-4.el8.x86_64 ocaml-srpm-macros-5-4.el8.noarch openblas-srpm-macros-2-2.el8.noarch openldap-2.4.46-16.el8.x86_64 openssl-1:1.1.1k-1.el8.x86_64 openssl-libs-1:1.1.1k-1.el8.x86_64 openssl-pkcs11-0.4.10-2.el8.x86_64 os-prober-1.74-6.el8.x86_64 p11-kit-0.23.22-1.el8.x86_64 p11-kit-trust-0.23.22-1.el8.x86_64 pam-1.3.1-15.el8.x86_64 patch-2.7.6-11.el8.x86_64 pciutils-3.7.0-1.el8.x86_64 pciutils-libs-3.7.0-1.el8.x86_64 pcre-8.42-5.el8.0.1.x86_64 pcre2-10.32-2.el8.x86_64 perl-srpm-macros-1-25.el8.noarch pigz-2.4-4.el8.x86_64 pinentry-1.1.0-2.el8.x86_64 pkgconf-1.4.2-1.el8.x86_64 pkgconf-m4-1.4.2-1.el8.noarch pkgconf-pkg-config-1.4.2-1.el8.x86_64 platform-python-3.6.8-38.el8.x86_64 platform-python-pip-9.0.3-19.el8.noarch platform-python-setuptools-39.2.0-6.el8.noarch popt-1.18-1.el8.x86_64 procps-ng-3.3.15-6.el8.x86_64 publicsuffix-list-dafsa-20180723-1.el8.noarch python-rpm-macros-3-41.el8.noarch python-srpm-macros-3-41.el8.noarch python3-libs-3.6.8-38.el8.x86_64 python3-pip-wheel-9.0.3-19.el8.noarch python3-rpm-macros-3-41.el8.noarch python3-setuptools-wheel-39.2.0-6.el8.noarch qt5-srpm-macros-5.15.2-1.el8.noarch rdma-core-35.0-1.el8.x86_64 readline-7.0-10.el8.x86_64 redhat-rpm-config-125-1.el8.noarch rpm-4.14.3-14.el8_4.x86_64 rpm-build-4.14.3-14.el8_4.x86_64 rpm-build-libs-4.14.3-14.el8_4.x86_64 rpm-libs-4.14.3-14.el8_4.x86_64 rust-srpm-macros-5-2.el8.noarch sed-4.5-2.el8.x86_64 setup-2.12.2-6.el8.noarch shadow-utils-2:4.6-13.el8.x86_64 shared-mime-info-1.9-3.el8.x86_64 sqlite-libs-3.26.0-15.el8.x86_64 systemd-239-45.el8.x86_64 systemd-libs-239-45.el8.x86_64 systemd-pam-239-45.el8.x86_64 systemd-udev-239-45.el8.x86_64 tar-2:1.30-5.el8.x86_64 tpm2-tss-2.3.2-4.el8.x86_64 trousers-0.3.15-1.el8.x86_64 trousers-lib-0.3.15-1.el8.x86_64 tzdata-2021a-1.el8.noarch unzip-6.0-45.el8.x86_64 util-linux-2.32.1-27.el8.x86_64 which-2.21-16.el8.x86_64 xkeyboard-config-2.28-1.el8.noarch xz-5.2.4-3.el8.x86_64 xz-libs-5.2.4-3.el8.x86_64 zip-3.0-23.el8.x86_64 zlib-1.2.11-17.el8.x86_64 zstd-1.4.4-1.el8.x86_64 Complete! No matches found for the following disable plugin patterns: local, spacewalk Invalid configuration value: failovermethod=priority in /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/etc/dnf/dnf.conf; Configuration: OptionBinding with id "failovermethod" does not exist Copr repository 121 kB/s | 3.3 kB 00:00 Additional repo http_pkg_adfinis_com_centos_8_s 22 kB/s | 4.4 kB 00:00 Additional repo https_mirror_init7_net_fedora_e 16 kB/s | 4.7 kB 00:00 Additional repo http_linuxsoft_cern_ch_epel_8_M 8.7 kB/s | 3.0 kB 00:00 Dependencies resolved. ============================================================================================== Package Arch Version Repository Size ============================================================================================== Installing: [1mepel-release [m noarch 8-10.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 22 k Transaction Summary ============================================================================================== Install 1 Package Total download size: 22 k Installed size: 32 k Downloading Packages: epel-release-8-10.el8.noarch.rpm 56 kB/s | 22 kB 00:00 -------------------------------------------------------------------------------- Total 56 kB/s | 22 kB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : epel-release-8-10.el8.noarch 1/1 Running scriptlet: epel-release-8-10.el8.noarch 1/1 Verifying : epel-release-8-10.el8.noarch 1/1 Installed: epel-release-8-10.el8.noarch Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: coreutils-common-8.30-9.el8.x86_64 libxcrypt-4.1.1-6.el8.x86_64 libatomic_ops-7.6.2-3.el8.x86_64 libgpg-error-1.31-1.el8.x86_64 libbabeltrace-1.5.4-3.el8.x86_64 zip-3.0-23.el8.x86_64 cracklib-2.9.6-15.el8.x86_64 gmp-6.1.2-10.el8.x86_64 expat-2.2.5-4.el8.x86_64 brotli-1.0.6-3.el8.x86_64 libsigsegv-2.11-5.el8.x86_64 kbd-2.0.4-10.el8.x86_64 kbd-misc-2.0.4-10.el8.noarch grep-3.1-6.el8.x86_64 libacl-2.2.53-1.el8.x86_64 hardlink-1.3-6.el8.x86_64 unzip-6.0-45.el8.x86_64 pinentry-1.1.0-2.el8.x86_64 efi-srpm-macros-3-3.el8.noarch curl-7.61.1-18.el8.x86_64 centos-stream-release-8.5-3.el8.noarch shared-mime-info-1.9-3.el8.x86_64 pam-1.3.1-15.el8.x86_64 ghc-srpm-macros-1.4.2-7.el8.noarch libcroco-0.6.12-4.el8_2.1.x86_64 info-6.5-6.el8.x86_64 xkeyboard-config-2.28-1.el8.noarch elfutils-libs-0.182-3.el8.x86_64 cryptsetup-libs-2.3.3-4.el8.x86_64 diffutils-3.6-6.el8.x86_64 qt5-srpm-macros-5.15.2-1.el8.noarch zlib-1.2.11-17.el8.x86_64 libsemanage-2.9-6.el8.x86_64 glibc-devel-2.28-158.el8.x86_64 gzip-1.9-12.el8.x86_64 libfdisk-2.32.1-27.el8.x86_64 libcom_err-1.45.6-1.el8.x86_64 basesystem-11-5.el8.noarch kbd-legacy-2.0.4-10.el8.noarch libkcapi-hmaccalc-1.2.0-2.el8.x86_64 guile-2.0.14-7.el8.x86_64 cpio-2.12-10.el8.x86_64 libuuid-2.32.1-27.el8.x86_64 file-5.33-20.el8.x86_64 libmetalink-0.1.3-7.el8.x86_64 perl-srpm-macros-1-25.el8.noarch libidn2-2.2.0-1.el8.x86_64 glib2-2.56.4-13.el8.x86_64 procps-ng-3.3.15-6.el8.x86_64 gcc-c++-8.5.0-1.el8.x86_64 pigz-2.4-4.el8.x86_64 kpartx-0.8.4-13.el8.x86_64 gdbm-libs-1.18-1.el8.x86_64 os-prober-1.74-6.el8.x86_64 zstd-1.4.4-1.el8.x86_64 glibc-2.28-158.el8.x86_64 filesystem-3.8-3.el8.x86_64 libsepol-2.9-2.el8.x86_64 glibc-headers-2.28-158.el8.x86_64 xz-5.2.4-3.el8.x86_64 libpkgconf-1.4.2-1.el8.x86_64 device-mapper-1.02.175-5.el8.x86_64 ima-evm-utils-1.3.2-12.el8.x86_64 pcre2-10.32-2.el8.x86_64 xz-libs-5.2.4-3.el8.x86_64 nettle-3.4.1-4.el8_3.x86_64 setup-2.12.2-6.el8.noarch lz4-libs-1.8.3-3.el8.x86_64 npth-1.5-4.el8.x86_64 libarchive-3.3.3-1.el8.x86_64 crypto-policies-20210209-1.gitbfb6bed.el8_3.noarch libmount-2.32.1-27.el8.x86_64 openssl-libs-1.1.1k-1.el8.x86_64 rpm-build-libs-4.14.3-14.el8_4.x86_64 libtool-ltdl-2.4.6-25.el8.x86_64 libdb-utils-5.3.28-40.el8.x86_64 coreutils-8.30-9.el8.x86_64 cyrus-sasl-lib-2.1.27-5.el8.x86_64 grubby-8.40-41.el8.x86_64 trousers-0.3.15-1.el8.x86_64 systemd-udev-239-45.el8.x86_64 elfutils-debuginfod-client-0.182-3.el8.x86_64 dbus-libs-1.12.8-14.el8.x86_64 python3-pip-wheel-9.0.3-19.el8.noarch gettext-libs-0.19.8.1-17.el8.x86_64 centos-stream-repos-8-2.el8.noarch libnghttp2-1.33.0-3.el8_2.1.x86_64 libssh-0.9.4-3.el8.x86_64 openssl-pkcs11-0.4.10-2.el8.x86_64 krb5-libs-1.18.2-10.el8.x86_64 dbus-daemon-1.12.8-14.el8.x86_64 libselinux-2.9-5.el8.x86_64 libdb-5.3.28-40.el8.x86_64 libibverbs-35.0-1.el8.x86_64 ca-certificates-2020.2.41-80.0.el8_2.noarch bzip2-libs-1.0.6-26.el8.x86_64 pcre-8.42-5.el8.0.1.x86_64 libassuan-2.5.1-3.el8.x86_64 dracut-049-136.git20210426.el8.x86_64 popt-1.18-1.el8.x86_64 file-libs-5.33-20.el8.x86_64 libxcrypt-devel-4.1.1-6.el8.x86_64 libffi-3.1-22.el8.x86_64 rpm-4.14.3-14.el8_4.x86_64 platform-python-setuptools-39.2.0-6.el8.noarch which-2.21-16.el8.x86_64 kmod-libs-25-17.el8.x86_64 libsmartcols-2.32.1-27.el8.x86_64 json-c-0.13.1-2.el8.x86_64 libstdc++-8.5.0-1.el8.x86_64 trousers-lib-0.3.15-1.el8.x86_64 gettext-0.19.8.1-17.el8.x86_64 libcap-2.26-4.el8.x86_64 ncurses-base-6.1-9.20180224.el8.noarch isl-0.16.1-6.el8.x86_64 libipt-1.6.1-8.el8.x86_64 memstrack-0.1.11-1.el8.x86_64 centos-gpg-keys-8-2.el8.noarch mpfr-3.1.6-1.el8.x86_64 libgcc-8.5.0-1.el8.x86_64 tar-1.30-5.el8.x86_64 cracklib-dicts-2.9.6-15.el8.x86_64 libcurl-7.61.1-18.el8.x86_64 keyutils-libs-1.5.10-6.el8.x86_64 dwz-0.12-9.el8.x86_64 cpp-8.5.0-1.el8.x86_64 openssl-1.1.1k-1.el8.x86_64 systemd-239-45.el8.x86_64 tzdata-2021a-1.el8.noarch libgomp-8.5.0-1.el8.x86_64 python3-libs-3.6.8-38.el8.x86_64 libpcap-1.9.1-5.el8.x86_64 libblkid-2.32.1-27.el8.x86_64 shadow-utils-4.6-13.el8.x86_64 openblas-srpm-macros-2-2.el8.noarch epel-release-8-10.el8.noarch gc-7.6.4-3.el8.x86_64 libverto-0.3.0-5.el8.x86_64 gnutls-3.6.14-8.el8_3.x86_64 ncurses-libs-6.1-9.20180224.el8.x86_64 python-srpm-macros-3-41.el8.noarch libattr-2.4.48-3.el8.x86_64 libstdc++-devel-8.5.0-1.el8.x86_64 device-mapper-libs-1.02.175-5.el8.x86_64 libmpc-1.1.0-9.1.el8.x86_64 platform-python-pip-9.0.3-19.el8.noarch python3-setuptools-wheel-39.2.0-6.el8.noarch publicsuffix-list-dafsa-20180723-1.el8.noarch pkgconf-pkg-config-1.4.2-1.el8.x86_64 glibc-common-2.28-158.el8.x86_64 rpm-libs-4.14.3-14.el8_4.x86_64 pciutils-libs-3.7.0-1.el8.x86_64 libpwquality-1.4.4-3.el8.x86_64 gnupg2-smime-2.2.20-2.el8.x86_64 findutils-4.6.0-20.el8.x86_64 elfutils-default-yama-scope-0.182-3.el8.noarch systemd-libs-239-45.el8.x86_64 redhat-rpm-config-125-1.el8.noarch libunistring-0.9.9-3.el8.x86_64 bzip2-1.0.6-26.el8.x86_64 acl-2.2.53-1.el8.x86_64 grub2-common-2.02-99.el8.noarch p11-kit-0.23.22-1.el8.x86_64 libzstd-1.4.4-1.el8.x86_64 rust-srpm-macros-5-2.el8.noarch gdbm-1.18-1.el8.x86_64 libxkbcommon-0.9.1-1.el8.x86_64 gcc-8.5.0-1.el8.x86_64 libxml2-2.9.7-11.el8.x86_64 dbus-tools-1.12.8-14.el8.x86_64 python3-rpm-macros-3-41.el8.noarch platform-python-3.6.8-38.el8.x86_64 libnsl2-1.2.0-2.20180605git4a062cf.el8.x86_64 libseccomp-2.5.1-1.el8.x86_64 gawk-4.2.1-2.el8.x86_64 gpg-pubkey-8483c65d-5ccc5b19 systemd-pam-239-45.el8.x86_64 patch-2.7.6-11.el8.x86_64 sqlite-libs-3.26.0-15.el8.x86_64 rdma-core-35.0-1.el8.x86_64 binutils-2.30-102.el8.x86_64 elfutils-libelf-0.182-3.el8.x86_64 libtasn1-4.13-3.el8.x86_64 audit-libs-3.0-0.17.20191104git1c2f876.el8.x86_64 grub2-tools-minimal-2.02-99.el8.x86_64 make-4.2.1-10.el8.x86_64 libkcapi-1.2.0-2.el8.x86_64 gdb-headless-8.2-15.el8.x86_64 dbus-1.12.8-14.el8.x86_64 crypto-policies-scripts-20210209-1.gitbfb6bed.el8_3.noarch p11-kit-trust-0.23.22-1.el8.x86_64 readline-7.0-10.el8.x86_64 sed-4.5-2.el8.x86_64 dbus-common-1.12.8-14.el8.noarch annobin-9.65-1.el8.0.1.x86_64 ocaml-srpm-macros-5-4.el8.noarch libssh-config-0.9.4-3.el8.noarch kernel-headers-4.18.0-305.3.1.el8.x86_64 libpsl-0.20.2-6.el8.x86_64 libgcrypt-1.8.5-5.el8.x86_64 util-linux-2.32.1-27.el8.x86_64 libsecret-0.18.6-1.el8.x86_64 rpm-build-4.14.3-14.el8_4.x86_64 bash-4.4.20-1.el8_4.x86_64 openldap-2.4.46-16.el8.x86_64 tpm2-tss-2.3.2-4.el8.x86_64 libusbx-1.0.23-4.el8.x86_64 libcap-ng-0.7.9-5.el8.x86_64 lua-libs-5.3.4-11.el8.x86_64 elfutils-0.182-3.el8.x86_64 libksba-1.3.5-7.el8.x86_64 ncurses-6.1-9.20180224.el8.x86_64 pkgconf-m4-1.4.2-1.el8.noarch gnupg2-2.2.20-2.el8.x86_64 pkgconf-1.4.2-1.el8.x86_64 kmod-25-17.el8.x86_64 pciutils-3.7.0-1.el8.x86_64 grub2-tools-2.02-99.el8.x86_64 go-srpm-macros-2-17.el8.noarch glibc-all-langpacks-2.28-158.el8.x86_64 chkconfig-1.13-2.el8.x86_64 libnl3-3.5.0-1.el8.x86_64 libtirpc-1.1.4-5.el8.x86_64 python-rpm-macros-3-41.el8.noarch hwdata-0.314-8.8.el8.noarch iptables-libs-1.8.4-17.el8.x86_64 libutempter-1.1.6-14.el8.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: line 85: Possible unexpanded macro in: Requires: hdf5(x86-64) = %{_hdf5_version} warning: line 105: Possible unexpanded macro in: Requires: hdf5(x86-64) = %{_hdf5_version} Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/h5py-2.10.0-4.el8.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.rpm.log /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.librepo.log /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-u9io1mec/h5py/h5py.spec) Config(child) 1 minutes 52 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el8.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1622759296.159212 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.10 starting (python version = 3.9.5, NVR = mock-2.10-1.fc34)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el8.src.rpm) Config(centos-stream-8-x86_64) Start: clean chroot Finish: clean chroot Start: chroot init INFO: mounting tmpfs at /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.10 INFO: Mock Version: 2.10 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk Invalid configuration value: failovermethod=priority in /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/etc/dnf/dnf.conf; Configuration: OptionBinding with id "failovermethod" does not exist Copr repository 157 kB/s | 3.3 kB 00:00 Additional repo http_pkg_adfinis_com_centos_8_s 23 kB/s | 4.4 kB 00:00 Additional repo https_mirror_init7_net_fedora_e 16 kB/s | 4.7 kB 00:00 Additional repo http_linuxsoft_cern_ch_epel_8_M 15 kB/s | 3.0 kB 00:00 CentOS-Stream - Base 16 kB/s | 3.9 kB 00:00 CentOS-Stream - AppStream 36 kB/s | 4.4 kB 00:00 CentOS-Stream - Extras 25 kB/s | 3.0 kB 00:00 CentOS-Stream - PowerTools 36 kB/s | 4.4 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for h5py-2.10.0-4.el8.src.rpm Start: build setup for h5py-2.10.0-4.el8.src.rpm warning: line 85: Possible unexpanded macro in: Requires: hdf5(x86-64) = %{_hdf5_version} warning: line 105: Possible unexpanded macro in: Requires: hdf5(x86-64) = %{_hdf5_version} Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/h5py-2.10.0-4.el8.src.rpm No matches found for the following disable plugin patterns: local, spacewalk Invalid configuration value: failovermethod=priority in /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/etc/dnf/dnf.conf; Configuration: OptionBinding with id "failovermethod" does not exist Copr repository 127 kB/s | 3.3 kB 00:00 Additional repo http_pkg_adfinis_com_centos_8_s 22 kB/s | 4.4 kB 00:00 Additional repo https_mirror_init7_net_fedora_e 16 kB/s | 4.7 kB 00:00 Additional repo http_linuxsoft_cern_ch_epel_8_M 15 kB/s | 3.0 kB 00:00 Package gcc-8.5.0-1.el8.x86_64 is already installed. Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing: [1mhdf5-devel [m x86_64 1.10.5-4.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 1.2 M [1mhdf5-openmpi-devel [m x86_64 1.10.5-4.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 1.1 M [1mliblzf-devel [m x86_64 3.6-16.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 13 k [1mopenmpi-devel [m x86_64 4.0.5-3.el8 Stream-AppStream 1.2 M [1mpython3-Cython [m x86_64 0.29.14-2.el8 copr_base 2.5 M [1mpython3-mpi4py-openmpi [m x86_64 3.0.2-5.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 533 k [1mpython3-numpy [m x86_64 1:1.18.5-1.el8 copr_base 4.9 M [1mpython3-pkgconfig [m noarch 1.5.1-5.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 19 k [1mpython3-six [m noarch 1.11.0-8.el8 Stream-BaseOS 38 k [1mpython36-devel [m x86_64 3.6.8-37.module_el8.5.0+771+e5d9a225 Stream-AppStream 16 k Installing dependencies: [1mLmod [m x86_64 8.2.7-1.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 236 k [1mgcc-gfortran [m x86_64 8.5.0-1.el8 Stream-AppStream 12 M [1mgroff-base [m x86_64 1.22.3-18.el8 Stream-BaseOS 1.0 M [1mhdf5 [m x86_64 1.10.5-4.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 2.1 M [1mhdf5-openmpi [m x86_64 1.10.5-4.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 2.2 M [1mhwloc-libs [m x86_64 2.2.0-2.el8 Stream-BaseOS 2.0 M [1mlibaec [m x86_64 1.0.2-3.el8 http_pkg_adfinis_com_centos_8_stream_PowerTools_x86_64_os 39 k [1mlibaec-devel [m x86_64 1.0.2-3.el8 http_pkg_adfinis_com_centos_8_stream_PowerTools_x86_64_os 12 k [1mlibedit [m x86_64 3.1-23.20170329cvs.el8 Stream-BaseOS 102 k [1mlibevent [m x86_64 2.1.8-5.el8 Stream-BaseOS 253 k 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16 k [1mmpi4py-common [m noarch 3.0.2-5.el8 https_mirror_init7_net_fedora_epel_8_Everything_x86_64 23 k [1mmunge [m x86_64 0.5.13-2.el8 Stream-AppStream 122 k [1mmunge-libs [m x86_64 0.5.13-2.el8 Stream-AppStream 30 k [1mnumactl-libs [m x86_64 2.0.12-13.el8 Stream-BaseOS 36 k [1mopenblas-threads [m x86_64 0.3.12-1.el8 Stream-AppStream 4.7 M [1mopenmpi [m x86_64 4.0.5-3.el8 Stream-AppStream 2.8 M [1mopensm-libs [m x86_64 3.3.23-4.el8 Stream-BaseOS 76 k [1mopenssh [m x86_64 8.0p1-8.el8 Stream-BaseOS 521 k [1mopenssh-clients [m x86_64 8.0p1-8.el8 Stream-BaseOS 667 k [1mperl-Carp [m noarch 1.42-396.el8 Stream-BaseOS 30 k [1mperl-Data-Dumper [m x86_64 2.167-399.el8 Stream-BaseOS 58 k [1mperl-Digest [m noarch 1.17-395.el8 Stream-AppStream 27 k [1mperl-Digest-MD5 [m x86_64 2.55-396.el8 Stream-AppStream 37 k [1mperl-Encode [m x86_64 4:2.97-3.el8 Stream-BaseOS 1.5 M [1mperl-Errno [m x86_64 1.28-419.el8 Stream-BaseOS 76 k [1mperl-Exporter [m noarch 5.72-396.el8 Stream-BaseOS 34 k 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46 k [1mperl-Term-Cap [m noarch 1.17-395.el8 Stream-BaseOS 23 k [1mperl-Text-ParseWords [m noarch 3.30-395.el8 Stream-BaseOS 18 k [1mperl-Text-Tabs+Wrap [m noarch 2013.0523-395.el8 Stream-BaseOS 24 k [1mperl-Time-Local [m noarch 1:1.280-1.el8 Stream-BaseOS 34 k [1mperl-URI [m noarch 1.73-3.el8 Stream-AppStream 116 k [1mperl-Unicode-Normalize [m x86_64 1.25-396.el8 Stream-BaseOS 82 k [1mperl-constant [m noarch 1.33-396.el8 Stream-BaseOS 25 k [1mperl-interpreter [m x86_64 4:5.26.3-419.el8 Stream-BaseOS 6.3 M [1mperl-libnet [m noarch 3.11-3.el8 Stream-AppStream 121 k [1mperl-libs [m x86_64 4:5.26.3-419.el8 Stream-BaseOS 1.6 M [1mperl-macros [m x86_64 4:5.26.3-419.el8 Stream-BaseOS 72 k [1mperl-parent [m noarch 1:0.237-1.el8 Stream-BaseOS 20 k [1mperl-podlators [m noarch 4.11-1.el8 Stream-BaseOS 118 k [1mperl-threads [m x86_64 1:2.21-2.el8 Stream-BaseOS 61 k [1mperl-threads-shared [m x86_64 1.58-2.el8 Stream-BaseOS 48 k [1mplatform-python-devel [m x86_64 3.6.8-38.el8 Stream-AppStream 249 k [1mpmix [m x86_64 2.2.4rc1-1.el8 Stream-AppStream 740 k [1mpython3-openmpi [m x86_64 4.0.5-3.el8 http_pkg_adfinis_com_centos_8_stream_PowerTools_x86_64_os 12 k [1mpython3-pip [m noarch 9.0.3-19.el8 Stream-AppStream 20 k [1mpython3-rpm-generators [m noarch 5-6.el8 Stream-AppStream 24 k [1mpython3-setuptools [m noarch 39.2.0-6.el8 Stream-BaseOS 163 k [1mpython36 [m x86_64 3.6.8-37.module_el8.5.0+771+e5d9a225 Stream-AppStream 19 k [1mrpm-mpi-hooks [m noarch 8-2.el8 Stream-AppStream 13 k [1mtcl [m x86_64 1:8.6.8-2.el8 Stream-BaseOS 1.1 M [1mtorque-libs [m x86_64 4.2.10-25.el8 Stream-AppStream 142 k [1mucx [m x86_64 1.9.0-1.el8 Stream-AppStream 525 k [1mzlib-devel [m x86_64 1.2.11-17.el8 Stream-BaseOS 58 k Installing weak dependencies: [1mperl-IO-Socket-IP [m noarch 0.39-5.el8 Stream-AppStream 47 k [1mperl-IO-Socket-SSL [m noarch 2.066-4.module_el8.4.0+517+be1595ff Stream-AppStream 298 k [1mperl-Mozilla-CA [m noarch 20160104-7.module_el8.3.0+416+dee7bcef Stream-AppStream 15 k Enabling module streams: perl 5.26 perl-IO-Socket-SSL 2.066 perl-libwww-perl 6.34 python36 3.6 Transaction Summary ========================================================================================================================================= Install 97 Packages Total download size: 58 M Installed size: 198 M Downloading Packages: (1/97): python3-numpy-1.18.5-1.el8.x86_64.rpm 47 MB/s | 4.9 MB 00:00 (2/97): python3-Cython-0.29.14-2.el8.x86_64.rpm 21 MB/s | 2.5 MB 00:00 (3/97): libaec-devel-1.0.2-3.el8.x86_64.rpm 57 kB/s | 12 kB 00:00 (4/97): libaec-1.0.2-3.el8.x86_64.rpm 122 kB/s | 39 kB 00:00 (5/97): lua-filesystem-1.6.3-7.el8.x86_64.rpm 125 kB/s | 35 kB 00:00 (6/97): python3-openmpi-4.0.5-3.el8.x86_64.rpm 100 kB/s | 12 kB 00:00 (7/97): lua-posix-33.3.1-9.el8.x86_64.rpm 417 kB/s | 176 kB 00:00 (8/97): Lmod-8.2.7-1.el8.x86_64.rpm 306 kB/s | 236 kB 00:00 (9/97): hdf5-1.10.5-4.el8.x86_64.rpm 1.8 MB/s | 2.1 MB 00:01 (10/97): hdf5-openmpi-1.10.5-4.el8.x86_64.rpm 4.3 MB/s | 2.2 MB 00:00 (11/97): hdf5-devel-1.10.5-4.el8.x86_64.rpm 1.2 MB/s | 1.2 MB 00:00 (12/97): hdf5-openmpi-devel-1.10.5-4.el8.x86_64 6.0 MB/s | 1.1 MB 00:00 (13/97): liblzf-3.6-16.el8.x86_64.rpm 211 kB/s | 28 kB 00:00 (14/97): liblzf-devel-3.6-16.el8.x86_64.rpm 123 kB/s | 13 kB 00:00 (15/97): lua-term-0.07-9.el8.x86_64.rpm 171 kB/s | 16 kB 00:00 (16/97): mpi4py-common-3.0.2-5.el8.noarch.rpm 218 kB/s | 23 kB 00:00 (17/97): python3-pkgconfig-1.5.1-5.el8.noarch.r 200 kB/s | 19 kB 00:00 (18/97): python3-mpi4py-openmpi-3.0.2-5.el8.x86 2.8 MB/s | 533 kB 00:00 (19/97): libedit-3.1-23.20170329cvs.el8.x86_64. 325 kB/s | 102 kB 00:00 (20/97): libevent-2.1.8-5.el8.x86_64.rpm 1.0 MB/s | 253 kB 00:00 (21/97): hwloc-libs-2.2.0-2.el8.x86_64.rpm 3.3 MB/s | 2.0 MB 00:00 (22/97): groff-base-1.22.3-18.el8.x86_64.rpm 1.5 MB/s | 1.0 MB 00:00 (23/97): libgfortran-8.5.0-1.el8.x86_64.rpm 7.5 MB/s | 642 kB 00:00 (24/97): libibumad-35.0-1.el8.x86_64.rpm 422 kB/s | 33 kB 00:00 (25/97): libquadmath-8.5.0-1.el8.x86_64.rpm 2.1 MB/s | 170 kB 00:00 (26/97): libpsm2-11.2.185-1.el8.x86_64.rpm 2.4 MB/s | 201 kB 00:00 (27/97): libfabric-1.12.1-1.el8.x86_64.rpm 4.0 MB/s | 824 kB 00:00 (28/97): logrotate-3.14.0-4.el8.x86_64.rpm 1.3 MB/s | 86 kB 00:00 (29/97): librdmacm-35.0-1.el8.x86_64.rpm 1.0 MB/s | 78 kB 00:00 (30/97): numactl-libs-2.0.12-13.el8.x86_64.rpm 511 kB/s | 36 kB 00:00 (31/97): opensm-libs-3.3.23-4.el8.x86_64.rpm 1.0 MB/s | 76 kB 00:00 (32/97): openssh-8.0p1-8.el8.x86_64.rpm 6.2 MB/s | 521 kB 00:00 (33/97): openssh-clients-8.0p1-8.el8.x86_64.rpm 7.6 MB/s | 667 kB 00:00 (34/97): perl-Carp-1.42-396.el8.noarch.rpm 395 kB/s | 30 kB 00:00 (35/97): perl-Data-Dumper-2.167-399.el8.x86_64. 790 kB/s | 58 kB 00:00 (36/97): perl-Errno-1.28-419.el8.x86_64.rpm 1.1 MB/s | 76 kB 00:00 (37/97): perl-Exporter-5.72-396.el8.noarch.rpm 477 kB/s | 34 kB 00:00 (38/97): perl-Encode-2.97-3.el8.x86_64.rpm 10 MB/s | 1.5 MB 00:00 (39/97): perl-File-Path-2.15-2.el8.noarch.rpm 554 kB/s | 38 kB 00:00 (40/97): perl-File-Temp-0.230.600-1.el8.noarch. 938 kB/s | 63 kB 00:00 (41/97): perl-Getopt-Long-2.50-4.el8.noarch.rpm 935 kB/s | 63 kB 00:00 (42/97): perl-HTTP-Tiny-0.074-1.el8.noarch.rpm 852 kB/s | 58 kB 00:00 (43/97): perl-IO-1.38-419.el8.x86_64.rpm 1.9 MB/s | 142 kB 00:00 (44/97): perl-MIME-Base64-3.15-396.el8.x86_64.r 476 kB/s | 31 kB 00:00 (45/97): perl-PathTools-3.74-1.el8.x86_64.rpm 1.3 MB/s | 90 kB 00:00 (46/97): perl-Pod-Escapes-1.07-395.el8.noarch.r 297 kB/s | 20 kB 00:00 (47/97): perl-Pod-Perldoc-3.28-396.el8.noarch.r 1.2 MB/s | 86 kB 00:00 (48/97): perl-Pod-Simple-3.35-395.el8.noarch.rp 2.8 MB/s | 213 kB 00:00 (49/97): perl-Pod-Usage-1.69-395.el8.noarch.rpm 492 kB/s | 34 kB 00:00 (50/97): perl-Scalar-List-Utils-1.49-2.el8.x86_ 980 kB/s | 68 kB 00:00 (51/97): perl-Socket-2.027-3.el8.x86_64.rpm 905 kB/s | 59 kB 00:00 (52/97): perl-Term-ANSIColor-4.06-396.el8.noarc 711 kB/s | 46 kB 00:00 (53/97): perl-Storable-3.11-3.el8.x86_64.rpm 1.4 MB/s | 98 kB 00:00 (54/97): perl-Term-Cap-1.17-395.el8.noarch.rpm 382 kB/s | 23 kB 00:00 (55/97): perl-Text-ParseWords-3.30-395.el8.noar 298 kB/s | 18 kB 00:00 (56/97): perl-Text-Tabs+Wrap-2013.0523-395.el8. 407 kB/s | 24 kB 00:00 (57/97): perl-Time-Local-1.280-1.el8.noarch.rpm 485 kB/s | 34 kB 00:00 (58/97): perl-Unicode-Normalize-1.25-396.el8.x8 1.3 MB/s | 82 kB 00:00 (59/97): perl-constant-1.33-396.el8.noarch.rpm 390 kB/s | 25 kB 00:00 (60/97): perl-macros-5.26.3-419.el8.x86_64.rpm 579 kB/s | 72 kB 00:00 (61/97): perl-libs-5.26.3-419.el8.x86_64.rpm 10 MB/s | 1.6 MB 00:00 (62/97): perl-parent-0.237-1.el8.noarch.rpm 330 kB/s | 20 kB 00:00 (63/97): perl-podlators-4.11-1.el8.noarch.rpm 1.6 MB/s | 118 kB 00:00 (64/97): perl-threads-2.21-2.el8.x86_64.rpm 978 kB/s | 61 kB 00:00 (65/97): perl-threads-shared-1.58-2.el8.x86_64. 733 kB/s | 48 kB 00:00 (66/97): perl-interpreter-5.26.3-419.el8.x86_64 19 MB/s | 6.3 MB 00:00 (67/97): python3-setuptools-39.2.0-6.el8.noarch 2.1 MB/s | 163 kB 00:00 (68/97): python3-six-1.11.0-8.el8.noarch.rpm 639 kB/s | 38 kB 00:00 (69/97): zlib-devel-1.2.11-17.el8.x86_64.rpm 806 kB/s | 58 kB 00:00 (70/97): tcl-8.6.8-2.el8.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (71/97): libquadmath-devel-8.5.0-1.el8.x86_64.r 345 kB/s | 23 kB 00:00 (72/97): lua-5.3.4-11.el8.x86_64.rpm 2.6 MB/s | 193 kB 00:00 (73/97): lua-json-1.3.2-9.el8.noarch.rpm 382 kB/s | 28 kB 00:00 (74/97): lua-lpeg-1.0.1-6.el8.x86_64.rpm 833 kB/s | 67 kB 00:00 (75/97): munge-0.5.13-2.el8.x86_64.rpm 1.8 MB/s | 122 kB 00:00 (76/97): munge-libs-0.5.13-2.el8.x86_64.rpm 465 kB/s | 30 kB 00:00 (77/97): openmpi-4.0.5-3.el8.x86_64.rpm 17 MB/s | 2.8 MB 00:00 (78/97): openblas-threads-0.3.12-1.el8.x86_64.r 16 MB/s | 4.7 MB 00:00 (79/97): openmpi-devel-4.0.5-3.el8.x86_64.rpm 10 MB/s | 1.2 MB 00:00 (80/97): gcc-gfortran-8.5.0-1.el8.x86_64.rpm 19 MB/s | 12 MB 00:00 (81/97): perl-Digest-1.17-395.el8.noarch.rpm 374 kB/s | 27 kB 00:00 (82/97): perl-Digest-MD5-2.55-396.el8.x86_64.rp 569 kB/s | 37 kB 00:00 (83/97): perl-Mozilla-CA-20160104-7.module_el8. 260 kB/s | 15 kB 00:00 (84/97): perl-IO-Socket-IP-0.39-5.el8.noarch.rp 686 kB/s | 47 kB 00:00 (85/97): perl-IO-Socket-SSL-2.066-4.module_el8. 3.9 MB/s | 298 kB 00:00 (86/97): perl-URI-1.73-3.el8.noarch.rpm 1.8 MB/s | 116 kB 00:00 (87/97): perl-Net-SSLeay-1.88-1.module_el8.4.0+ 5.2 MB/s | 379 kB 00:00 (88/97): perl-libnet-3.11-3.el8.noarch.rpm 1.9 MB/s | 121 kB 00:00 (89/97): platform-python-devel-3.6.8-38.el8.x86 3.8 MB/s | 249 kB 00:00 (90/97): python3-pip-9.0.3-19.el8.noarch.rpm 333 kB/s | 20 kB 00:00 (91/97): pmix-2.2.4rc1-1.el8.x86_64.rpm 8.2 MB/s | 740 kB 00:00 (92/97): python3-rpm-generators-5-6.el8.noarch. 408 kB/s | 24 kB 00:00 (93/97): python36-3.6.8-37.module_el8.5.0+771+e 324 kB/s | 19 kB 00:00 (94/97): python36-devel-3.6.8-37.module_el8.5.0 275 kB/s | 16 kB 00:00 (95/97): rpm-mpi-hooks-8-2.el8.noarch.rpm 181 kB/s | 13 kB 00:00 (96/97): torque-libs-4.2.10-25.el8.x86_64.rpm 1.9 MB/s | 142 kB 00:00 (97/97): ucx-1.9.0-1.el8.x86_64.rpm 6.8 MB/s | 525 kB 00:00 -------------------------------------------------------------------------------- Total 12 MB/s | 58 MB 00:04 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : libquadmath-8.5.0-1.el8.x86_64 1/97 Running scriptlet: libquadmath-8.5.0-1.el8.x86_64 1/97 Installing : libgfortran-8.5.0-1.el8.x86_64 2/97 Running scriptlet: libgfortran-8.5.0-1.el8.x86_64 2/97 Installing : munge-libs-0.5.13-2.el8.x86_64 3/97 Installing : lua-5.3.4-11.el8.x86_64 4/97 Installing : numactl-libs-2.0.12-13.el8.x86_64 5/97 Running scriptlet: numactl-libs-2.0.12-13.el8.x86_64 5/97 Installing : libevent-2.1.8-5.el8.x86_64 6/97 Installing : libaec-1.0.2-3.el8.x86_64 7/97 Installing : libaec-devel-1.0.2-3.el8.x86_64 8/97 Installing : libpsm2-11.2.185-1.el8.x86_64 9/97 Running scriptlet: libpsm2-11.2.185-1.el8.x86_64 9/97 Installing : zlib-devel-1.2.11-17.el8.x86_64 10/97 Installing : librdmacm-35.0-1.el8.x86_64 11/97 Running scriptlet: librdmacm-35.0-1.el8.x86_64 11/97 Installing : hwloc-libs-2.2.0-2.el8.x86_64 12/97 Installing : libfabric-1.12.1-1.el8.x86_64 13/97 Running scriptlet: libfabric-1.12.1-1.el8.x86_64 13/97 Installing : hdf5-1.10.5-4.el8.x86_64 14/97 Installing : ucx-1.9.0-1.el8.x86_64 15/97 Running scriptlet: ucx-1.9.0-1.el8.x86_64 15/97 Installing : lua-filesystem-1.6.3-7.el8.x86_64 16/97 Installing : openblas-threads-0.3.12-1.el8.x86_64 17/97 Running scriptlet: openblas-threads-0.3.12-1.el8.x86_64 17/97 Installing : libquadmath-devel-8.5.0-1.el8.x86_64 18/97 Installing : gcc-gfortran-8.5.0-1.el8.x86_64 19/97 Running scriptlet: gcc-gfortran-8.5.0-1.el8.x86_64 19/97 Installing : python3-rpm-generators-5-6.el8.noarch 20/97 Installing : platform-python-devel-3.6.8-38.el8.x86_64 21/97 Installing : lua-lpeg-1.0.1-6.el8.x86_64 22/97 Installing : lua-json-1.3.2-9.el8.noarch 23/97 Installing : tcl-1:8.6.8-2.el8.x86_64 24/97 Running scriptlet: tcl-1:8.6.8-2.el8.x86_64 24/97 Installing : python3-setuptools-39.2.0-6.el8.noarch 25/97 Installing : python3-pip-9.0.3-19.el8.noarch 26/97 Installing : python36-3.6.8-37.module_el8.5.0+771+e5d9a225.x86_ 27/97 Running scriptlet: python36-3.6.8-37.module_el8.5.0+771+e5d9a225.x86_ 27/97 Running scriptlet: openssh-8.0p1-8.el8.x86_64 28/97 Installing : openssh-8.0p1-8.el8.x86_64 28/97 Running scriptlet: logrotate-3.14.0-4.el8.x86_64 29/97 Installing : logrotate-3.14.0-4.el8.x86_64 29/97 Running scriptlet: munge-0.5.13-2.el8.x86_64 30/97 Installing : munge-0.5.13-2.el8.x86_64 30/97 Running scriptlet: munge-0.5.13-2.el8.x86_64 30/97 Installing : torque-libs-4.2.10-25.el8.x86_64 31/97 Installing : libibumad-35.0-1.el8.x86_64 32/97 Running scriptlet: libibumad-35.0-1.el8.x86_64 32/97 Installing : opensm-libs-3.3.23-4.el8.x86_64 33/97 Running scriptlet: opensm-libs-3.3.23-4.el8.x86_64 33/97 Installing : libedit-3.1-23.20170329cvs.el8.x86_64 34/97 Installing : openssh-clients-8.0p1-8.el8.x86_64 35/97 Installing : groff-base-1.22.3-18.el8.x86_64 36/97 Installing : perl-Digest-1.17-395.el8.noarch 37/97 Installing : perl-Digest-MD5-2.55-396.el8.x86_64 38/97 Installing : perl-Data-Dumper-2.167-399.el8.x86_64 39/97 Installing : perl-libnet-3.11-3.el8.noarch 40/97 Installing : perl-Net-SSLeay-1.88-1.module_el8.4.0+517+be1595ff 41/97 Installing : perl-URI-1.73-3.el8.noarch 42/97 Installing : perl-Pod-Escapes-1:1.07-395.el8.noarch 43/97 Installing : perl-Time-Local-1:1.280-1.el8.noarch 44/97 Installing : perl-IO-Socket-IP-0.39-5.el8.noarch 45/97 Installing : perl-Mozilla-CA-20160104-7.module_el8.3.0+416+dee7 46/97 Installing : perl-IO-Socket-SSL-2.066-4.module_el8.4.0+517+be15 47/97 Installing : perl-Term-ANSIColor-4.06-396.el8.noarch 48/97 Installing : perl-Term-Cap-1.17-395.el8.noarch 49/97 Installing : perl-File-Temp-0.230.600-1.el8.noarch 50/97 Installing : perl-HTTP-Tiny-0.074-1.el8.noarch 51/97 Installing : perl-Pod-Simple-1:3.35-395.el8.noarch 52/97 Installing : perl-podlators-4.11-1.el8.noarch 53/97 Installing : perl-Pod-Perldoc-3.28-396.el8.noarch 54/97 Installing : perl-Text-ParseWords-3.30-395.el8.noarch 55/97 Installing : perl-Pod-Usage-4:1.69-395.el8.noarch 56/97 Installing : perl-MIME-Base64-3.15-396.el8.x86_64 57/97 Installing : perl-Storable-1:3.11-3.el8.x86_64 58/97 Installing : perl-Getopt-Long-1:2.50-4.el8.noarch 59/97 Installing : perl-Errno-1.28-419.el8.x86_64 60/97 Installing : perl-Socket-4:2.027-3.el8.x86_64 61/97 Installing : perl-Encode-4:2.97-3.el8.x86_64 62/97 Installing : perl-Carp-1.42-396.el8.noarch 63/97 Installing : perl-Exporter-5.72-396.el8.noarch 64/97 Installing : perl-libs-4:5.26.3-419.el8.x86_64 65/97 Installing : perl-Scalar-List-Utils-3:1.49-2.el8.x86_64 66/97 Installing : perl-parent-1:0.237-1.el8.noarch 67/97 Installing : perl-macros-4:5.26.3-419.el8.x86_64 68/97 Installing : perl-Text-Tabs+Wrap-2013.0523-395.el8.noarch 69/97 Installing : perl-Unicode-Normalize-1.25-396.el8.x86_64 70/97 Installing : perl-File-Path-2.15-2.el8.noarch 71/97 Installing : perl-IO-1.38-419.el8.x86_64 72/97 Installing : perl-PathTools-3.74-1.el8.x86_64 73/97 Installing : perl-constant-1.33-396.el8.noarch 74/97 Installing : perl-threads-1:2.21-2.el8.x86_64 75/97 Installing : perl-threads-shared-1.58-2.el8.x86_64 76/97 Installing : perl-interpreter-4:5.26.3-419.el8.x86_64 77/97 Installing : mpi4py-common-3.0.2-5.el8.noarch 78/97 Installing : lua-term-0.07-9.el8.x86_64 79/97 Installing : liblzf-3.6-16.el8.x86_64 80/97 Installing : lua-posix-33.3.1-9.el8.x86_64 81/97 Installing : Lmod-8.2.7-1.el8.x86_64 82/97 Running scriptlet: Lmod-8.2.7-1.el8.x86_64 82/97 Installing : pmix-2.2.4rc1-1.el8.x86_64 83/97 Installing : openmpi-4.0.5-3.el8.x86_64 84/97 Installing : python3-openmpi-4.0.5-3.el8.x86_64 85/97 Installing : hdf5-openmpi-1.10.5-4.el8.x86_64 86/97 Installing : rpm-mpi-hooks-8-2.el8.noarch 87/97 Installing : openmpi-devel-4.0.5-3.el8.x86_64 88/97 Installing : hdf5-openmpi-devel-1.10.5-4.el8.x86_64 89/97 Installing : python3-mpi4py-openmpi-3.0.2-5.el8.x86_64 90/97 Installing : liblzf-devel-3.6-16.el8.x86_64 91/97 Installing : python36-devel-3.6.8-37.module_el8.5.0+771+e5d9a22 92/97 Running scriptlet: python36-devel-3.6.8-37.module_el8.5.0+771+e5d9a22 92/97 Installing : hdf5-devel-1.10.5-4.el8.x86_64 93/97 Installing : python3-numpy-1:1.18.5-1.el8.x86_64 94/97 Installing : python3-six-1.11.0-8.el8.noarch 95/97 Installing : python3-pkgconfig-1.5.1-5.el8.noarch 96/97 Installing : python3-Cython-0.29.14-2.el8.x86_64 97/97 Running scriptlet: python3-Cython-0.29.14-2.el8.x86_64 97/97 Verifying : python3-Cython-0.29.14-2.el8.x86_64 1/97 Verifying : python3-numpy-1:1.18.5-1.el8.x86_64 2/97 Verifying : libaec-1.0.2-3.el8.x86_64 3/97 Verifying : libaec-devel-1.0.2-3.el8.x86_64 4/97 Verifying : lua-filesystem-1.6.3-7.el8.x86_64 5/97 Verifying : lua-posix-33.3.1-9.el8.x86_64 6/97 Verifying : python3-openmpi-4.0.5-3.el8.x86_64 7/97 Verifying : Lmod-8.2.7-1.el8.x86_64 8/97 Verifying : hdf5-1.10.5-4.el8.x86_64 9/97 Verifying : hdf5-devel-1.10.5-4.el8.x86_64 10/97 Verifying : hdf5-openmpi-1.10.5-4.el8.x86_64 11/97 Verifying : hdf5-openmpi-devel-1.10.5-4.el8.x86_64 12/97 Verifying : liblzf-3.6-16.el8.x86_64 13/97 Verifying : liblzf-devel-3.6-16.el8.x86_64 14/97 Verifying : lua-term-0.07-9.el8.x86_64 15/97 Verifying : mpi4py-common-3.0.2-5.el8.noarch 16/97 Verifying : python3-mpi4py-openmpi-3.0.2-5.el8.x86_64 17/97 Verifying : python3-pkgconfig-1.5.1-5.el8.noarch 18/97 Verifying : groff-base-1.22.3-18.el8.x86_64 19/97 Verifying : hwloc-libs-2.2.0-2.el8.x86_64 20/97 Verifying : libedit-3.1-23.20170329cvs.el8.x86_64 21/97 Verifying : libevent-2.1.8-5.el8.x86_64 22/97 Verifying : libfabric-1.12.1-1.el8.x86_64 23/97 Verifying : libgfortran-8.5.0-1.el8.x86_64 24/97 Verifying : libibumad-35.0-1.el8.x86_64 25/97 Verifying : libpsm2-11.2.185-1.el8.x86_64 26/97 Verifying : libquadmath-8.5.0-1.el8.x86_64 27/97 Verifying : librdmacm-35.0-1.el8.x86_64 28/97 Verifying : logrotate-3.14.0-4.el8.x86_64 29/97 Verifying : numactl-libs-2.0.12-13.el8.x86_64 30/97 Verifying : opensm-libs-3.3.23-4.el8.x86_64 31/97 Verifying : openssh-8.0p1-8.el8.x86_64 32/97 Verifying : openssh-clients-8.0p1-8.el8.x86_64 33/97 Verifying : perl-Carp-1.42-396.el8.noarch 34/97 Verifying : perl-Data-Dumper-2.167-399.el8.x86_64 35/97 Verifying : perl-Encode-4:2.97-3.el8.x86_64 36/97 Verifying : perl-Errno-1.28-419.el8.x86_64 37/97 Verifying : perl-Exporter-5.72-396.el8.noarch 38/97 Verifying : perl-File-Path-2.15-2.el8.noarch 39/97 Verifying : perl-File-Temp-0.230.600-1.el8.noarch 40/97 Verifying : perl-Getopt-Long-1:2.50-4.el8.noarch 41/97 Verifying : perl-HTTP-Tiny-0.074-1.el8.noarch 42/97 Verifying : perl-IO-1.38-419.el8.x86_64 43/97 Verifying : perl-MIME-Base64-3.15-396.el8.x86_64 44/97 Verifying : perl-PathTools-3.74-1.el8.x86_64 45/97 Verifying : perl-Pod-Escapes-1:1.07-395.el8.noarch 46/97 Verifying : perl-Pod-Perldoc-3.28-396.el8.noarch 47/97 Verifying : perl-Pod-Simple-1:3.35-395.el8.noarch 48/97 Verifying : perl-Pod-Usage-4:1.69-395.el8.noarch 49/97 Verifying : perl-Scalar-List-Utils-3:1.49-2.el8.x86_64 50/97 Verifying : perl-Socket-4:2.027-3.el8.x86_64 51/97 Verifying : perl-Storable-1:3.11-3.el8.x86_64 52/97 Verifying : perl-Term-ANSIColor-4.06-396.el8.noarch 53/97 Verifying : perl-Term-Cap-1.17-395.el8.noarch 54/97 Verifying : perl-Text-ParseWords-3.30-395.el8.noarch 55/97 Verifying : perl-Text-Tabs+Wrap-2013.0523-395.el8.noarch 56/97 Verifying : perl-Time-Local-1:1.280-1.el8.noarch 57/97 Verifying : perl-Unicode-Normalize-1.25-396.el8.x86_64 58/97 Verifying : perl-constant-1.33-396.el8.noarch 59/97 Verifying : perl-interpreter-4:5.26.3-419.el8.x86_64 60/97 Verifying : perl-libs-4:5.26.3-419.el8.x86_64 61/97 Verifying : perl-macros-4:5.26.3-419.el8.x86_64 62/97 Verifying : perl-parent-1:0.237-1.el8.noarch 63/97 Verifying : perl-podlators-4.11-1.el8.noarch 64/97 Verifying : perl-threads-1:2.21-2.el8.x86_64 65/97 Verifying : perl-threads-shared-1.58-2.el8.x86_64 66/97 Verifying : python3-setuptools-39.2.0-6.el8.noarch 67/97 Verifying : python3-six-1.11.0-8.el8.noarch 68/97 Verifying : tcl-1:8.6.8-2.el8.x86_64 69/97 Verifying : zlib-devel-1.2.11-17.el8.x86_64 70/97 Verifying : gcc-gfortran-8.5.0-1.el8.x86_64 71/97 Verifying : libquadmath-devel-8.5.0-1.el8.x86_64 72/97 Verifying : lua-5.3.4-11.el8.x86_64 73/97 Verifying : lua-json-1.3.2-9.el8.noarch 74/97 Verifying : lua-lpeg-1.0.1-6.el8.x86_64 75/97 Verifying : munge-0.5.13-2.el8.x86_64 76/97 Verifying : munge-libs-0.5.13-2.el8.x86_64 77/97 Verifying : openblas-threads-0.3.12-1.el8.x86_64 78/97 Verifying : openmpi-4.0.5-3.el8.x86_64 79/97 Verifying : openmpi-devel-4.0.5-3.el8.x86_64 80/97 Verifying : perl-Digest-1.17-395.el8.noarch 81/97 Verifying : perl-Digest-MD5-2.55-396.el8.x86_64 82/97 Verifying : perl-IO-Socket-IP-0.39-5.el8.noarch 83/97 Verifying : perl-IO-Socket-SSL-2.066-4.module_el8.4.0+517+be15 84/97 Verifying : perl-Mozilla-CA-20160104-7.module_el8.3.0+416+dee7 85/97 Verifying : perl-Net-SSLeay-1.88-1.module_el8.4.0+517+be1595ff 86/97 Verifying : perl-URI-1.73-3.el8.noarch 87/97 Verifying : perl-libnet-3.11-3.el8.noarch 88/97 Verifying : platform-python-devel-3.6.8-38.el8.x86_64 89/97 Verifying : pmix-2.2.4rc1-1.el8.x86_64 90/97 Verifying : python3-pip-9.0.3-19.el8.noarch 91/97 Verifying : python3-rpm-generators-5-6.el8.noarch 92/97 Verifying : python36-3.6.8-37.module_el8.5.0+771+e5d9a225.x86_ 93/97 Verifying : python36-devel-3.6.8-37.module_el8.5.0+771+e5d9a22 94/97 Verifying : rpm-mpi-hooks-8-2.el8.noarch 95/97 Verifying : torque-libs-4.2.10-25.el8.x86_64 96/97 Verifying : ucx-1.9.0-1.el8.x86_64 97/97 Installed: Lmod-8.2.7-1.el8.x86_64 gcc-gfortran-8.5.0-1.el8.x86_64 groff-base-1.22.3-18.el8.x86_64 hdf5-1.10.5-4.el8.x86_64 hdf5-devel-1.10.5-4.el8.x86_64 hdf5-openmpi-1.10.5-4.el8.x86_64 hdf5-openmpi-devel-1.10.5-4.el8.x86_64 hwloc-libs-2.2.0-2.el8.x86_64 libaec-1.0.2-3.el8.x86_64 libaec-devel-1.0.2-3.el8.x86_64 libedit-3.1-23.20170329cvs.el8.x86_64 libevent-2.1.8-5.el8.x86_64 libfabric-1.12.1-1.el8.x86_64 libgfortran-8.5.0-1.el8.x86_64 libibumad-35.0-1.el8.x86_64 liblzf-3.6-16.el8.x86_64 liblzf-devel-3.6-16.el8.x86_64 libpsm2-11.2.185-1.el8.x86_64 libquadmath-8.5.0-1.el8.x86_64 libquadmath-devel-8.5.0-1.el8.x86_64 librdmacm-35.0-1.el8.x86_64 logrotate-3.14.0-4.el8.x86_64 lua-5.3.4-11.el8.x86_64 lua-filesystem-1.6.3-7.el8.x86_64 lua-json-1.3.2-9.el8.noarch lua-lpeg-1.0.1-6.el8.x86_64 lua-posix-33.3.1-9.el8.x86_64 lua-term-0.07-9.el8.x86_64 mpi4py-common-3.0.2-5.el8.noarch munge-0.5.13-2.el8.x86_64 munge-libs-0.5.13-2.el8.x86_64 numactl-libs-2.0.12-13.el8.x86_64 openblas-threads-0.3.12-1.el8.x86_64 openmpi-4.0.5-3.el8.x86_64 openmpi-devel-4.0.5-3.el8.x86_64 opensm-libs-3.3.23-4.el8.x86_64 openssh-8.0p1-8.el8.x86_64 openssh-clients-8.0p1-8.el8.x86_64 perl-Carp-1.42-396.el8.noarch perl-Data-Dumper-2.167-399.el8.x86_64 perl-Digest-1.17-395.el8.noarch perl-Digest-MD5-2.55-396.el8.x86_64 perl-Encode-4:2.97-3.el8.x86_64 perl-Errno-1.28-419.el8.x86_64 perl-Exporter-5.72-396.el8.noarch perl-File-Path-2.15-2.el8.noarch perl-File-Temp-0.230.600-1.el8.noarch perl-Getopt-Long-1:2.50-4.el8.noarch perl-HTTP-Tiny-0.074-1.el8.noarch perl-IO-1.38-419.el8.x86_64 perl-IO-Socket-IP-0.39-5.el8.noarch perl-IO-Socket-SSL-2.066-4.module_el8.4.0+517+be1595ff.noarch perl-MIME-Base64-3.15-396.el8.x86_64 perl-Mozilla-CA-20160104-7.module_el8.3.0+416+dee7bcef.noarch perl-Net-SSLeay-1.88-1.module_el8.4.0+517+be1595ff.x86_64 perl-PathTools-3.74-1.el8.x86_64 perl-Pod-Escapes-1:1.07-395.el8.noarch perl-Pod-Perldoc-3.28-396.el8.noarch perl-Pod-Simple-1:3.35-395.el8.noarch perl-Pod-Usage-4:1.69-395.el8.noarch perl-Scalar-List-Utils-3:1.49-2.el8.x86_64 perl-Socket-4:2.027-3.el8.x86_64 perl-Storable-1:3.11-3.el8.x86_64 perl-Term-ANSIColor-4.06-396.el8.noarch perl-Term-Cap-1.17-395.el8.noarch perl-Text-ParseWords-3.30-395.el8.noarch perl-Text-Tabs+Wrap-2013.0523-395.el8.noarch perl-Time-Local-1:1.280-1.el8.noarch perl-URI-1.73-3.el8.noarch perl-Unicode-Normalize-1.25-396.el8.x86_64 perl-constant-1.33-396.el8.noarch perl-interpreter-4:5.26.3-419.el8.x86_64 perl-libnet-3.11-3.el8.noarch perl-libs-4:5.26.3-419.el8.x86_64 perl-macros-4:5.26.3-419.el8.x86_64 perl-parent-1:0.237-1.el8.noarch perl-podlators-4.11-1.el8.noarch perl-threads-1:2.21-2.el8.x86_64 perl-threads-shared-1.58-2.el8.x86_64 platform-python-devel-3.6.8-38.el8.x86_64 pmix-2.2.4rc1-1.el8.x86_64 python3-Cython-0.29.14-2.el8.x86_64 python3-mpi4py-openmpi-3.0.2-5.el8.x86_64 python3-numpy-1:1.18.5-1.el8.x86_64 python3-openmpi-4.0.5-3.el8.x86_64 python3-pip-9.0.3-19.el8.noarch python3-pkgconfig-1.5.1-5.el8.noarch python3-rpm-generators-5-6.el8.noarch python3-setuptools-39.2.0-6.el8.noarch python3-six-1.11.0-8.el8.noarch python36-3.6.8-37.module_el8.5.0+771+e5d9a225.x86_64 python36-devel-3.6.8-37.module_el8.5.0+771+e5d9a225.x86_64 rpm-mpi-hooks-8-2.el8.noarch tcl-1:8.6.8-2.el8.x86_64 torque-libs-4.2.10-25.el8.x86_64 ucx-1.9.0-1.el8.x86_64 zlib-devel-1.2.11-17.el8.x86_64 Complete! Finish: build setup for h5py-2.10.0-4.el8.src.rpm Start: rpmbuild h5py-2.10.0-4.el8.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Te5ocv + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf h5py-2.10.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/h5py-2.10.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd h5py-2.10.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (h5py-system-lzf.patch): + echo 'Patch #0 (h5py-system-lzf.patch):' + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .lzf --fuzz=0 patching file lzf/lzf_filter.c patching file setup_build.py + echo 'Patch #1 (h5py-2.10.x-branch.patch):' Patch #1 (h5py-2.10.x-branch.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 -b --suffix .2.10.x --fuzz=0 patching file h5py/_hl/dataset.py patching file h5py/h5t.pyx patching file h5py/tests/test_dataset.py + rm -rf lzf/lzf + /usr/libexec/platform-python api_gen.py + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.kPmpzt + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/libexec/platform-python setup.py build '--executable=/usr/libexec/platform-python -s' running build running build_py creating build creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/h5py copying h5py/version.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/ipy_completer.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/highlevel.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/h5py_warnings.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/__init__.py -> build/lib.linux-x86_64-3.6/h5py creating build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dataset.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/vds.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections2.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/group.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/filters.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/files.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dims.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/datatype.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/compat.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/base.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/attrs.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/__init__.py -> build/lib.linux-x86_64-3.6/h5py/_hl creating build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_threads.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_slicing.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_selections.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_objects.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5t.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5pl.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5p.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5f.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5d_direct_chunk.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_group.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_filters.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file_image.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file2.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dtype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dims_dimensionproxy.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dimension_scales.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_deprecation.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_datatype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_swmr.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_getitem.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_completions.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_base.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs_data.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attribute_create.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/common.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests creating build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_virtual_source.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_lowlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_highlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds running build_ext warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared warning: h5py/h5fd.pxd:73:6: 'H5FD_LOG_ALL' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: False Rebuild Required: True ******************************************************************************** Executing cythonize() [ 1/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.pyx [ 2/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.pyx [ 3/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.pyx [ 4/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.pyx [ 5/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/defs.pyx [ 6/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5.pyx [ 7/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.pyx [ 8/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.pyx [ 9/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.pyx [10/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.pyx [11/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.pyx [12/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.pyx [13/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.pyx [14/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.pyx [15/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.pyx [16/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.pyx [17/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.pyx [18/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.pyx [19/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.pyx [20/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.pyx [21/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.pyx [22/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.pyx [23/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/utils.pyx building 'h5py.defs' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/builddir creating build/temp.linux-x86_64-3.6/builddir/build creating build/temp.linux-x86_64-3.6/builddir/build/BUILD creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0 creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Pget_driver_info’: /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:21212:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_1 = H5Pget_driver_info(__pyx_v_plist_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 2016, __pyx_L1_error) ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:643: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so building 'h5py._errors' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_walk_cb’: /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1324:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_3 = (__pyx_v_desc[0]).desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_set_exception’: /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1613:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1696:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:643: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so building 'h5py._objects' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so building 'h5py._proxy' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5fd' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5z' extension creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5i' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5r' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so building 'h5py.utils' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c: In function ‘__pyx_pymod_exec_utils’: /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:3468:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so building 'h5py._conv' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c: In function ‘__pyx_pymod_exec__conv’: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:8545:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ At top level: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:1918:18: warning: ‘__pyx_f_4h5py_5_conv_objectify’ defined but not used [-Wunused-function] static PyObject *__pyx_f_4h5py_5_conv_objectify(PyObject *__pyx_v_o) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5t' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python3.6m/Python.h:97, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:47: /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c: In function ‘__pyx_f_4h5py_3h5t__get_available_ftypes’: /usr/include/python3.6m/tupleobject.h:62:73: warning: assignment to ‘PyObject *’ {aka ‘struct _object *’} from incompatible pointer type ‘PyTypeObject *’ {aka ‘struct _typeobject *’} [-Wincompatible-pointer-types] #define PyTuple_SET_ITEM(op, i, v) (((PyTupleObject *)(op))->ob_item[i] = v) ^ /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:3824:5: note: in expansion of macro ‘PyTuple_SET_ITEM’ PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_fdtype->typeobj); ^~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5s' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5p' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function ‘__pyx_pymod_exec_h5p’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:24837:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function ‘__Pyx_PyInt_As_hbool_t’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:31754:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:31772:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:31790:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5d' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c: In function ‘__pyx_pymod_exec_h5d’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:8785:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5a' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c: In function ‘__pyx_pymod_exec_h5a’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:9298:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5f' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5g' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c: In function ‘__pyx_pf_4h5py_3h5g_7GroupID_22__contains__’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:6565:37: warning: variable ‘__pyx_v_new_handler’ set but not used [-Wunused-but-set-variable] __pyx_t_4h5py_7_errors_err_cookie __pyx_v_new_handler; ^~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5l' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c: In function ‘__pyx_pf_4h5py_3h5l_9LinkProxy_12get_val’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:95: warning: passing argument 4 of ‘__pyx_f_4h5py_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:95: note: expected ‘const char **’ but argument is of type ‘char **’ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:121: warning: passing argument 5 of ‘__pyx_f_4h5py_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:3974:121: note: expected ‘const char **’ but argument is of type ‘char **’ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:644: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5o' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ds' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ac' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:643: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c: In function ‘__Pyx_PyInt_As_hbool_t’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:6774:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:6792:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:6810:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:643: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5pl' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:644: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared + sleep 1 + mv build serial + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 61 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + /usr/libexec/platform-python setup.py configure --mpi running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: True Rebuild Required: True ******************************************************************************** + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/libexec/platform-python setup.py build '--executable=/usr/libexec/platform-python -s' running build running build_py creating build creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/h5py copying h5py/version.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/ipy_completer.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/highlevel.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/h5py_warnings.py -> build/lib.linux-x86_64-3.6/h5py copying h5py/__init__.py -> build/lib.linux-x86_64-3.6/h5py creating build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dataset.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/vds.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections2.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/selections.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/group.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/filters.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/files.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/dims.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/datatype.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/compat.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/base.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/attrs.py -> build/lib.linux-x86_64-3.6/h5py/_hl copying h5py/_hl/__init__.py -> build/lib.linux-x86_64-3.6/h5py/_hl creating build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_threads.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_slicing.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_selections.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_objects.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5t.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5pl.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5p.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5f.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5d_direct_chunk.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_h5.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_group.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_filters.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file_image.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file2.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_file.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dtype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dims_dimensionproxy.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dimension_scales.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_deprecation.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_datatype.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_swmr.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_dataset_getitem.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_completions.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_base.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs_data.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attrs.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/test_attribute_create.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/common.py -> build/lib.linux-x86_64-3.6/h5py/tests copying h5py/tests/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests creating build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_virtual_source.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_lowlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/test_highlevel_vds.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds copying h5py/tests/test_vds/__init__.py -> build/lib.linux-x86_64-3.6/h5py/tests/test_vds running build_ext warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared warning: h5py/h5fd.pxd:42:8: 'H5FD_MPIO_COLLECTIVE' redeclared warning: h5py/h5fd.pxd:43:8: 'H5FD_MPIO_INDEPENDENT' redeclared warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared warning: h5py/h5fd.pxd:73:6: 'H5FD_LOG_ALL' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: True Rebuild Required: True ******************************************************************************** Executing cythonize() [ 1/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.pyx [ 2/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.pyx [ 3/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.pyx [ 4/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.pyx [ 5/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/defs.pyx [ 6/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5.pyx [ 7/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.pyx [ 8/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.pyx [ 9/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.pyx [10/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.pyx [11/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.pyx [12/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.pyx [13/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.pyx [14/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.pyx [15/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.pyx [16/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.pyx [17/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.pyx [18/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.pyx [19/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.pyx [20/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.pyx [21/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.pyx [22/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.pyx [23/23] Cythonizing /builddir/build/BUILD/h5py-2.10.0/h5py/utils.pyx building 'h5py.defs' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/builddir creating build/temp.linux-x86_64-3.6/builddir/build creating build/temp.linux-x86_64-3.6/builddir/build/BUILD creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0 creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Pget_driver_info’: /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:21786:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_1 = H5Pget_driver_info(__pyx_v_plist_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 2016, __pyx_L1_error) ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/defs.c:645: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/defs.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so building 'h5py._errors' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_walk_cb’: /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1674:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_3 = (__pyx_v_desc[0]).desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_set_exception’: /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:1963:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:2046:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] __pyx_t_8 = __pyx_v_err.err.desc; ^ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_errors.c:645: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_errors.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so building 'h5py._objects' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_objects.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_objects.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so building 'h5py._proxy' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_proxy.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5fd' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5fd.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5z' extension creating build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5z.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5z.o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/lzf/lzf_filter.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5i' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5i.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5i.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5r' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5r.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5r.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so building 'h5py.utils' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:647: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c: In function ‘__pyx_pymod_exec_utils’: /builddir/build/BUILD/h5py-2.10.0/h5py/utils.c:3848:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/utils.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so building 'h5py._conv' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c: In function ‘__pyx_pymod_exec__conv’: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:8925:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ At top level: /builddir/build/BUILD/h5py-2.10.0/h5py/_conv.c:2257:18: warning: ‘__pyx_f_4h5py_5_conv_objectify’ defined but not used [-Wunused-function] static PyObject *__pyx_f_4h5py_5_conv_objectify(PyObject *__pyx_v_o) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/_conv.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5t' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python3.6m/Python.h:97, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:48: /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c: In function ‘__pyx_f_4h5py_3h5t__get_available_ftypes’: /usr/include/python3.6m/tupleobject.h:62:73: warning: assignment to ‘PyObject *’ {aka ‘struct _object *’} from incompatible pointer type ‘PyTypeObject *’ {aka ‘struct _typeobject *’} [-Wincompatible-pointer-types] #define PyTuple_SET_ITEM(op, i, v) (((PyTupleObject *)(op))->ob_item[i] = v) ^ /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:4163:5: note: in expansion of macro ‘PyTuple_SET_ITEM’ PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_fdtype->typeobj); ^~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5t.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5t.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5s' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5s.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5s.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5p' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function ‘__pyx_pymod_exec_h5p’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:25778:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c: In function ‘__Pyx_PyInt_As_hbool_t’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:32812:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:32830:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5p.c:32848:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5p.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5d' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c: In function ‘__pyx_pymod_exec_h5d’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5d.c:9165:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5d.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5a' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c: In function ‘__pyx_pymod_exec_h5a’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5a.c:9678:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] import_array(); ^~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5a.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5f' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5f.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5f.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5g' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c: In function ‘__pyx_pf_4h5py_3h5g_7GroupID_22__contains__’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:6904:37: warning: variable ‘__pyx_v_new_handler’ set but not used [-Wunused-but-set-variable] __pyx_t_4h5py_7_errors_err_cookie __pyx_v_new_handler; ^~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5g.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5g.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5l' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c: In function ‘__pyx_pf_4h5py_3h5l_9LinkProxy_12get_val’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4313:95: warning: passing argument 4 of ‘__pyx_f_4h5py_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4313:95: note: expected ‘const char **’ but argument is of type ‘char **’ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4313:121: warning: passing argument 5 of ‘__pyx_f_4h5py_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] __pyx_f_4h5py_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(PyErr_Occurred())) __PYX_ERR(1, 187, __pyx_L5_error) ~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:4313:121: note: expected ‘const char **’ but argument is of type ‘char **’ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5l.c:646: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5l.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5o' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5o.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5o.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ds' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ds.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5ac' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:645: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c: In function ‘__Pyx_PyInt_As_hbool_t’: /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:7154:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:7172:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:7190:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.c:645: At top level: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5ac.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so building 'h5py.h5pl' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 -fPIC -DH5_USE_16_API -I./h5py -I/builddir/build/BUILD/h5py-2.10.0/lzf -I/opt/local/include -I/usr/local/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/lib64/python3.6/site-packages/openmpi/mpi4py/include -I/usr/include/python3.6m -c /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c -o build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /builddir/build/BUILD/h5py-2.10.0/h5py/api_compat.h:26, from /builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.c:646: /usr/lib64/python3.6/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function] _import_array(void) ^~~~~~~~~~~~~ gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64 build/temp.linux-x86_64-3.6/builddir/build/BUILD/h5py-2.10.0/h5py/h5pl.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib64 -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -llzf -lpython3.6m -o build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared + sleep 1 + mv build openmpi + /usr/libexec/platform-python setup.py configure --reset running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: False Rebuild Required: True ******************************************************************************** + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 61 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXt9LG1wYXRoQT17Ii9ldGMvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwiL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eCIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsIi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hh ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.o2JAZs + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 ++ dirname /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 + cd h5py-2.10.0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 393 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXttcGk9e1siZm4iXT0iL2V0Yy9tb2R1bGVmaWxlcy9tcGkvb3Blbm1waS14ODZfNjQiLFsiZnVsbE5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0IixbImxvYWRPcmRlciJdPTEscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MCxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0Iix9LH0sbXBhdGhBPXsiL2V0Yy9tb2R1bGVmaWxlcyIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4IiwiL3Vzci9zaGFyZS9tb2R1 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + mv openmpi build + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + /usr/libexec/platform-python setup.py configure --mpi running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: True Rebuild Required: True ******************************************************************************** + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/libexec/platform-python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 running install running install_lib creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6 creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_highlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_lowlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_virtual_source.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/common.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attribute_create.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs_data.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_completions.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_getitem.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_swmr.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_deprecation.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dimension_scales.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dims_dimensionproxy.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dtype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file_image.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5d_direct_chunk.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5f.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5p.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5pl.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5t.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_objects.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_slicing.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_threads.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/compat.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dims.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/files.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5py_warnings.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/highlevel.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/ipy_completer.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/version.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_highlevel_vds.py to test_highlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_lowlevel_vds.py to test_lowlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_virtual_source.py to test_virtual_source.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/common.py to common.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attribute_create.py to test_attribute_create.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs.py to test_attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs_data.py to test_attrs_data.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_base.py to test_base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_completions.py to test_completions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_getitem.py to test_dataset_getitem.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_swmr.py to test_dataset_swmr.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_datatype.py to test_datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_deprecation.py to test_deprecation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dimension_scales.py to test_dimension_scales.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dims_dimensionproxy.py to test_dims_dimensionproxy.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dtype.py to test_dtype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file.py to test_file.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file2.py to test_file2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file_image.py to test_file_image.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_filters.py to test_filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_group.py to test_group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5.py to test_h5.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5d_direct_chunk.py to test_h5d_direct_chunk.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5f.py to test_h5f.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5p.py to test_h5p.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5pl.py to test_h5pl.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5t.py to test_h5t.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_objects.py to test_objects.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_selections.py to test_selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_slicing.py to test_slicing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_threads.py to test_threads.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset.py to test_dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/attrs.py to attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/base.py to base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/compat.py to compat.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/datatype.py to datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dims.py to dims.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/files.py to files.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/filters.py to filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/group.py to group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections.py to selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections2.py to selections2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/vds.py to vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dataset.py to dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/h5py_warnings.py to h5py_warnings.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/highlevel.py to highlevel.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/ipy_completer.py to ipy_completer.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/version.py to version.cpython-36.pyc writing byte-compilation script '/tmp/tmp0v94qp5k.py' /usr/libexec/platform-python /tmp/tmp0v94qp5k.py removing /tmp/tmp0v94qp5k.py running install_egg_info running egg_info writing h5py.egg-info/PKG-INFO writing dependency_links to h5py.egg-info/dependency_links.txt writing requirements to h5py.egg-info/requires.txt writing top-level names to h5py.egg-info/top_level.txt reading manifest file 'h5py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'docs/_build' no previously-included directories found matching 'docs_api/_build' warning: no previously-included files matching '.DS_Store' found under directory '*' warning: no previously-included files found matching 'ci' warning: no previously-included files found matching 'other' warning: no previously-included files found matching '.github' warning: no previously-included files matching '*' found under directory 'ci' warning: no previously-included files matching '*' found under directory 'other' warning: no previously-included files matching '*' found under directory '.github' warning: no previously-included files found matching 'pavement.py' warning: no previously-included files found matching '*.yml' warning: no previously-included files found matching '*.yaml' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.mailmap' warning: no previously-included files found matching 'rever.xsh' no previously-included directories found matching 'news' writing manifest file 'h5py.egg-info/SOURCES.txt' Copying h5py.egg-info to /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info running install_scripts + mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/openmpi + mv /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/ /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/openmpi + /usr/libexec/platform-python setup.py configure --reset running configure Loading library to get version: libhdf5.so Autodetected HDF5 1.10.5 ******************************************************************************** Summary of the h5py configuration Path to HDF5: None HDF5 Version: '1.10.5' MPI Enabled: False Rebuild Required: True ******************************************************************************** + mv build openmpi + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 393 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + mv serial build + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fopenmp -I/usr/include/openmpi-x86_64' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/libexec/platform-python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 running install running install_lib creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5pl.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ac.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5ds.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5o.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5l.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5g.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5f.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5a.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5d.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5p.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5s.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5t.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_conv.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/utils.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5r.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5i.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5z.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5fd.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_proxy.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_objects.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/_errors.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/defs.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_highlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_lowlevel_vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/test_vds/test_virtual_source.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds copying build/lib.linux-x86_64-3.6/h5py/tests/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/common.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attribute_create.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_attrs_data.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_completions.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_getitem.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset_swmr.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_deprecation.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dimension_scales.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dims_dimensionproxy.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dtype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_file_image.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5d_direct_chunk.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5f.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5p.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5pl.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_h5t.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_objects.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_slicing.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_threads.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests copying build/lib.linux-x86_64-3.6/h5py/tests/test_dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests creating /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/attrs.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/base.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/compat.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/datatype.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dims.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/files.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/filters.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/group.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/selections2.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/vds.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/_hl/dataset.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl copying build/lib.linux-x86_64-3.6/h5py/__init__.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/h5py_warnings.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/highlevel.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/ipy_completer.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py copying build/lib.linux-x86_64-3.6/h5py/version.py -> /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_highlevel_vds.py to test_highlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_lowlevel_vds.py to test_lowlevel_vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_vds/test_virtual_source.py to test_virtual_source.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/common.py to common.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attribute_create.py to test_attribute_create.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs.py to test_attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_attrs_data.py to test_attrs_data.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_base.py to test_base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_completions.py to test_completions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_getitem.py to test_dataset_getitem.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset_swmr.py to test_dataset_swmr.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_datatype.py to test_datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_deprecation.py to test_deprecation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dimension_scales.py to test_dimension_scales.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dims_dimensionproxy.py to test_dims_dimensionproxy.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dtype.py to test_dtype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file.py to test_file.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file2.py to test_file2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_file_image.py to test_file_image.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_filters.py to test_filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_group.py to test_group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5.py to test_h5.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5d_direct_chunk.py to test_h5d_direct_chunk.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5f.py to test_h5f.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5p.py to test_h5p.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5pl.py to test_h5pl.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_h5t.py to test_h5t.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_objects.py to test_objects.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_selections.py to test_selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_slicing.py to test_slicing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_threads.py to test_threads.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/tests/test_dataset.py to test_dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/attrs.py to attrs.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/base.py to base.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/compat.py to compat.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/datatype.py to datatype.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dims.py to dims.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/files.py to files.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/filters.py to filters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/group.py to group.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections.py to selections.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/selections2.py to selections2.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/vds.py to vds.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/_hl/dataset.py to dataset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/h5py_warnings.py to h5py_warnings.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/highlevel.py to highlevel.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/ipy_completer.py to ipy_completer.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py/version.py to version.cpython-36.pyc writing byte-compilation script '/tmp/tmp9dxpsy4u.py' /usr/libexec/platform-python /tmp/tmp9dxpsy4u.py removing /tmp/tmp9dxpsy4u.py running install_egg_info running egg_info writing h5py.egg-info/PKG-INFO writing dependency_links to h5py.egg-info/dependency_links.txt writing requirements to h5py.egg-info/requires.txt writing top-level names to h5py.egg-info/top_level.txt reading manifest file 'h5py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'docs/_build' no previously-included directories found matching 'docs_api/_build' warning: no previously-included files matching '.DS_Store' found under directory '*' warning: no previously-included files found matching 'ci' warning: no previously-included files found matching 'other' warning: no previously-included files found matching '.github' warning: no previously-included files matching '*' found under directory 'ci' warning: no previously-included files matching '*' found under directory 'other' warning: no previously-included files matching '*' found under directory '.github' warning: no previously-included files found matching 'pavement.py' warning: no previously-included files found matching '*.yml' warning: no previously-included files found matching '*.yaml' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' warning: no previously-included files found matching '.coveragerc' warning: no previously-included files found matching '.mailmap' warning: no previously-included files found matching 'rever.xsh' no previously-included directories found matching 'news' writing manifest file 'h5py.egg-info/SOURCES.txt' Copying h5py.egg-info to /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages/h5py-2.10.0-py3.6.egg-info running install_scripts + mv build serial + python_binary=/usr/libexec/platform-python + buildroot_path=/builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6/site-packages + bytecode_compilation_path=./usr/lib64/python3.6/site-packages + failure=0 + pushd /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 ~/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 ~/build/BUILD/h5py-2.10.0 + xargs -0 /usr/libexec/platform-python -O -m py_compile + find ./usr/lib64/python3.6/site-packages -type f -a -name '*.py' -print0 + find ./usr/lib64/python3.6/site-packages -type f -a -name '*.py' -print0 + xargs -0 /usr/libexec/platform-python -m py_compile + popd ~/build/BUILD/h5py-2.10.0 + test 0 -eq 0 + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile '' 1 Bytecompiling .py files below /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/lib64/python3.6 using /usr/libexec/platform-python + /usr/lib/rpm/brp-python-hardlink + PYTHON3=/usr/libexec/platform-python + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.DbyZ7t + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + exit 0 Processing files: python3-h5py-2.10.0-4.el8.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.bewvzw + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + DOCDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py + cp -pr ANN.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py + cp -pr README.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py + cp -pr examples /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.X3c3pw + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + LICENSEDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py + cp -pr licenses/hdf5.txt licenses/license.txt licenses/pytables.txt licenses/python.txt licenses/stdint.txt /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py + exit 0 Provides: python3-h5py = 2.10.0-4.el8 python3-h5py(x86-64) = 2.10.0-4.el8 python3.6dist(h5py) = 2.10.0 python3dist(h5py) = 2.10.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgomp.so.1()(64bit) libhdf5.so.103()(64bit) libhdf5_hl.so.100()(64bit) liblzf.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: python3-h5py-openmpi-2.10.0-4.el8.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.jAtKOw + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + DOCDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py-openmpi + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py-openmpi + cp -pr ANN.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py-openmpi + cp -pr README.rst /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/doc/python3-h5py-openmpi + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.5c4Vqx + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + LICENSEDIR=/builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py-openmpi + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py-openmpi + cp -pr licenses/hdf5.txt licenses/license.txt licenses/pytables.txt licenses/python.txt licenses/stdint.txt /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64/usr/share/licenses/python3-h5py-openmpi + exit 0 Provides: python3-h5py-openmpi = 2.10.0-4.el8 python3-h5py-openmpi(x86-64) = 2.10.0-4.el8 python3.6dist(h5py) = 2.10.0 python3dist(h5py) = 2.10.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgomp.so.1()(64bit) libhdf5.so.103()(64bit)(openmpi-x86_64) libhdf5_hl.so.100()(64bit)(openmpi-x86_64) liblzf.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 Wrote: /builddir/build/RPMS/python3-h5py-2.10.0-4.el8.x86_64.rpm Wrote: /builddir/build/RPMS/python3-h5py-openmpi-2.10.0-4.el8.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.SWrWAu + umask 022 + cd /builddir/build/BUILD + cd h5py-2.10.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/h5py-2.10.0-4.el8.x86_64 + exit 0 Finish: rpmbuild h5py-2.10.0-4.el8.src.rpm Finish: build phase for h5py-2.10.0-4.el8.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.rpm.log /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.librepo.log /var/lib/mock/centos-stream-8-x86_64-1622759296.159212/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/h5py-2.10.0-4.el8.src.rpm) Config(child) 4 minutes 20 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run