%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  biomod2
%global packver   4.2-4
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          4.2.4
Release:          1%{?dist}%{?buildtag}
Summary:          Ensemble Platform for Species Distribution Modeling

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1
Requires:         R-core >= 4.1
BuildArch:        noarch
BuildRequires:    R-CRAN-gbm >= 2.1.3
BuildRequires:    R-CRAN-terra >= 1.6.33
BuildRequires:    R-CRAN-pROC >= 1.15.0
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-methods 
BuildRequires:    R-CRAN-sp 
BuildRequires:    R-CRAN-reshape 
BuildRequires:    R-CRAN-reshape2 
BuildRequires:    R-CRAN-abind 
BuildRequires:    R-CRAN-foreach 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-nnet 
BuildRequires:    R-CRAN-xgboost 
BuildRequires:    R-CRAN-mda 
BuildRequires:    R-CRAN-randomForest 
BuildRequires:    R-CRAN-maxnet 
BuildRequires:    R-CRAN-rpart 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-PresenceAbsence 
BuildRequires:    R-CRAN-earth 
BuildRequires:    R-CRAN-dplyr 
Requires:         R-CRAN-gbm >= 2.1.3
Requires:         R-CRAN-terra >= 1.6.33
Requires:         R-CRAN-pROC >= 1.15.0
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-methods 
Requires:         R-CRAN-sp 
Requires:         R-CRAN-reshape 
Requires:         R-CRAN-reshape2 
Requires:         R-CRAN-abind 
Requires:         R-CRAN-foreach 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-nnet 
Requires:         R-CRAN-xgboost 
Requires:         R-CRAN-mda 
Requires:         R-CRAN-randomForest 
Requires:         R-CRAN-maxnet 
Requires:         R-CRAN-rpart 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-PresenceAbsence 
Requires:         R-CRAN-earth 
Requires:         R-CRAN-dplyr 

%description
Functions for species distribution modeling, calibration and evaluation,
ensemble of models, ensemble forecasting and visualization. The package
permits to run consistently up to 10 single models on a presence/absences
(resp presences/pseudo-absences) dataset and to combine them in ensemble
models and ensemble projections. Some bench of other evaluation and
visualisation tools are also available within the package.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}