%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  gWQS
%global packver   3.0.5
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          3.0.5
Release:          1%{?dist}%{?buildtag}
Summary:          Generalized Weighted Quantile Sum Regression

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-broom 
BuildRequires:    R-CRAN-rlist 
BuildRequires:    R-CRAN-MASS 
BuildRequires:    R-CRAN-reshape2 
BuildRequires:    R-CRAN-plotROC 
BuildRequires:    R-CRAN-knitr 
BuildRequires:    R-CRAN-kableExtra 
BuildRequires:    R-CRAN-nnet 
BuildRequires:    R-CRAN-future 
BuildRequires:    R-CRAN-future.apply 
BuildRequires:    R-CRAN-pscl 
BuildRequires:    R-CRAN-ggrepel 
BuildRequires:    R-CRAN-cowplot 
BuildRequires:    R-CRAN-Matrix 
BuildRequires:    R-CRAN-car 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-bookdown 
Requires:         R-CRAN-ggplot2 
Requires:         R-stats 
Requires:         R-CRAN-broom 
Requires:         R-CRAN-rlist 
Requires:         R-CRAN-MASS 
Requires:         R-CRAN-reshape2 
Requires:         R-CRAN-plotROC 
Requires:         R-CRAN-knitr 
Requires:         R-CRAN-kableExtra 
Requires:         R-CRAN-nnet 
Requires:         R-CRAN-future 
Requires:         R-CRAN-future.apply 
Requires:         R-CRAN-pscl 
Requires:         R-CRAN-ggrepel 
Requires:         R-CRAN-cowplot 
Requires:         R-CRAN-Matrix 
Requires:         R-CRAN-car 
Requires:         R-utils 
Requires:         R-CRAN-bookdown 

%description
Fits Weighted Quantile Sum (WQS) regression (Carrico et al. (2014)
<doi:10.1007/s13253-014-0180-3>), a random subset implementation of WQS
(Curtin et al. (2019) <doi:10.1080/03610918.2019.1577971>), a repeated
holdout validation WQS (Tanner et al. (2019)
<doi:10.1016/j.mex.2019.11.008>) and a WQS with 2 indices (Renzetti et al.
(2023) <doi:10.3389/fpubh.2023.1289579>) for continuous, binomial,
multinomial, Poisson, quasi-Poisson and negative binomial outcomes.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}