plot.ggmncv {GGMncv} | R Documentation |
ggmncv
ObjectsPlot the solution path for the partial correlations.
## S3 method for class 'ggmncv'
plot(x, size = 1, alpha = 0.5, ...)
x |
An object of class |
size |
Numeric. Line size in |
alpha |
Numeric. The transparency of the lines. |
... |
Currently ignored. |
A ggplot
object.
# data
Y <- GGMncv::ptsd[,1:10]
# correlations
S <- cor(Y, method = "spearman")
# fit model
# default: atan
fit <- ggmncv(R = S, n = nrow(Y), progress = FALSE)
# plot
plot(fit)
# lasso
fit <- ggmncv(R = S, n = nrow(Y), progress = FALSE,
penalty = "lasso")
# plot
plot(fit)