Mock Version: 4.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-RoBMA.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1689735675.937230/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'a0b18a3193e845bb86d08c60a0c45ea3', '-D', '/var/lib/mock/fedora-38-x86_64-1689735675.937230/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-RoBMA.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-RoBMA.spec'], chrootPath='/var/lib/mock/fedora-38-x86_64-1689735675.937230/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '6e62bac3a205495d8e0c5db6b3a53a1e', '-D', '/var/lib/mock/fedora-38-x86_64-1689735675.937230/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.l9hw4rja:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-RoBMA.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ysQqLo + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf RoBMA + /usr/bin/mkdir -p RoBMA + cd RoBMA + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/RoBMA_3.1.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d RoBMA/src ']' + find RoBMA/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d RoBMA/src ']' + find RoBMA/src/Makevars.in RoBMA/src/Makevars.ucrt RoBMA/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.wFy3JS + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd RoBMA + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.lDmhzy + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd RoBMA + mkdir -p /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library RoBMA * installing *source* package 'RoBMA' ... file 'tools/check.env' has the wrong MD5 checksum ** using staged installation checking for pkg-config... /usr/bin/pkg-config configure: Setting compile and link flags according to pkg-config configure: Compile flags are -I/usr/include/JAGS configure: Link flags are -ljags checking for gcc... gcc checking whether the compiler supports GNU C... no checking whether gcc accepts -g... no checking for gcc option to enable C11 features... unsupported checking for gcc option to enable C99 features... unsupported checking for gcc option to enable C89 features... unsupported checking for jags_version in -ljags... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: 'gcc (GCC) 13.1.1 20230614 (Red Hat 13.1.1-4)' using C++ compiler: 'g++ (GCC) 13.1.1 20230614 (Red Hat 13.1.1-4)' g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DMN.cc -o distributions/DMN.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWMN1.cc -o distributions/DWMN1.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWMN2.cc -o distributions/DWMN2.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DMNv.cc -o distributions/DMNv.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWMN1v.cc -o distributions/DWMN1v.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWMN2v.cc -o distributions/DWMN2v.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWN1.cc -o distributions/DWN1.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWN2.cc -o distributions/DWN2.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWT1.cc -o distributions/DWT1.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWT2.cc -o distributions/DWT2.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWN.cc -o distributions/DWN.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWWN1.cc -o distributions/DWWN1.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWWN2.cc -o distributions/DWWN2.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distributions/DWB.cc -o distributions/DWB.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c transformations/z.cc -o transformations/z.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c transformations/r.cc -o transformations/r.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c transformations/d.cc -o transformations/d.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c transformations/logOR.cc -o transformations/logOR.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c functions/wmnorm.cc -o functions/wmnorm.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c functions/mnorm.cc -o functions/mnorm.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matrix/matrix.cc -o matrix/matrix.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c source/tools.cc -o source/tools.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c source/mnorm.cc -o source/mnorm.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c source/wmnorm.cc -o source/wmnorm.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c source/transformations.cc -o source/transformations.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RoBMA.cc -o RoBMA.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -DR_NO_REMAP -I'/usr/local/lib/R/library/mvtnorm/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c testRoBMA.cc -o testRoBMA.o g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o RoBMA.so distributions/DMN.o distributions/DWMN1.o distributions/DWMN2.o distributions/DMNv.o distributions/DWMN1v.o distributions/DWMN2v.o distributions/DWN1.o distributions/DWN2.o distributions/DWT1.o distributions/DWT2.o distributions/DWN.o distributions/DWWN1.o distributions/DWWN2.o distributions/DWB.o transformations/z.o transformations/r.o transformations/d.o transformations/logOR.o functions/wmnorm.o functions/mnorm.o matrix/matrix.o source/tools.o source/mnorm.o source/wmnorm.o source/transformations.o init.o RoBMA.o testRoBMA.o -ljags -ljrmath -lflexiblas -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library/00LOCK-RoBMA/00new/RoBMA/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help Loading required namespace: RoBMA Loading required namespace: runjags Loading required namespace: mvtnorm *** installing help indices converting help for package 'RoBMA' finding HTML links ... done Anderson2010 html Bem2011 html BiBMA html Kroupova2021 html Lui2015 html NoBMA html NoBMA.reg html Poulsen2006 html RoBMA-package html RoBMA html RoBMA.reg html RoBMA_control html RoBMA_options html check_RoBMA html check_setup.BiBMA html check_setup html check_setup.reg html combine_data html contr.independent html contr.meandif html contr.orthonormal html diagnostics html effect_sizes html forest html interpret html is.RoBMA html marginal_plot html marginal_summary html plot.RoBMA html plot_models html print.RoBMA html print.marginal_summary.RoBMA html print.summary.RoBMA html prior html prior_PEESE html prior_PET html prior_factor html prior_informed html prior_none html prior_weightfunction html sample_sizes html standard_errors html summary.RoBMA html update.BiBMA html update.RoBMA html weighted_multivariate_normal html weighted_normal html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RoBMA) + test -d RoBMA/src + cd RoBMA/src + rm -f RoBMA.o init.o testRoBMA.o RoBMA.so + rm -f /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 3.1.0-1.fc38.copr6183882 --unique-debug-suffix -3.1.0-1.fc38.copr6183882.x86_64 --unique-debug-src-base R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/RoBMA extracting debug info from /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/usr/local/lib/R/library/RoBMA/libs/RoBMA.so /usr/bin/gdb.minimal original debug info size: 1964kB, size after compression: 1020kB /usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 281 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/z.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/z.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/r.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/r.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/logOR.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/logOR.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/transformations/d.h is executable but has no shebang, removing executable bit *** WARNING: 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./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/source/tools.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/source/tools.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/source/mnorm.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/source/mnorm.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/matrix/matrix.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/matrix/matrix.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/init.c is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/functions/wmnorm.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/functions/wmnorm.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/functions/mnorm.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/functions/mnorm.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWWN2.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWWN2.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWWN1.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWWN1.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWT2.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWT2.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWT1.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWT1.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN2.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN2.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN1.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN1.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWN.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN2v.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN2v.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN2.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN2.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN1v.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN1v.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN1.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWMN1.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWB.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DWB.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DMNv.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DMNv.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DMN.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/distributions/DMN.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64/RoBMA/src/RoBMA.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/CITATION is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/REFERENCES.bib is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/apa.csl is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/CustomEnsembles.R is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/CustomEnsembles.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/CustomEnsembles.html is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/HierarchicalBMA.R is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/HierarchicalBMA.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/HierarchicalBMA.html is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/MedicineBMA.R is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/MedicineBMA.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/MedicineBMA.html is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/ReproducingBMA.R is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/ReproducingBMA.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/ReproducingBMA.html is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/Tutorial.R is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/Tutorial.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/RoBMA/doc/Tutorial.html is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 Provides: R-CRAN-RoBMA = 3.1.0-1.fc38.copr6183882 R-CRAN-RoBMA(x86-64) = 3.1.0-1.fc38.copr6183882 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libjags.so.4()(64bit) libjrmath.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-RoBMA-debugsource-3.1.0-1.fc38.copr6183882.x86_64 Provides: R-CRAN-RoBMA-debugsource = 3.1.0-1.fc38.copr6183882 R-CRAN-RoBMA-debugsource(x86-64) = 3.1.0-1.fc38.copr6183882 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-RoBMA-debuginfo-3.1.0-1.fc38.copr6183882.x86_64 Provides: R-CRAN-RoBMA-debuginfo = 3.1.0-1.fc38.copr6183882 R-CRAN-RoBMA-debuginfo(x86-64) = 3.1.0-1.fc38.copr6183882 debuginfo(build-id) = 44b60032ed6b823867f086c20fc65d60019a8e23 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-RoBMA-debugsource(x86-64) = 3.1.0-1.fc38.copr6183882 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-RoBMA-debuginfo-3.1.0-1.fc38.copr6183882.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-RoBMA-debugsource-3.1.0-1.fc38.copr6183882.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.WOAl13 + umask 022 + cd /builddir/build/BUILD + cd RoBMA + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-RoBMA-3.1.0-1.fc38.copr6183882.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.yVCKu1 + umask 022 + cd /builddir/build/BUILD + rm -rf RoBMA RoBMA.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Child return code was: 0