Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1d7' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6665194-fedora-38-x86_64 --chroot fedora-38-x86_64 Version: 0.69 PID: 7845 Logging PID: 7846 Task: {'appstream': False, 'background': True, 'bootstrap': 'off', 'build_id': 6665194, 'buildroot_pkgs': [], 'chroot': 'fedora-38-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '0b031220206424ed20cb1e07acdaa47cb614b27c', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-psqn', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-CRAN-psqn', 'package_version': '0.3.1-1', 'project_dirname': 'cran', 'project_name': 'cran', 'project_owner': 'iucar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-38-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'iucar/cran--iucar', 'source_json': {}, 'source_type': None, 'submitter': 'iucar', 'tags': [], 'task_id': '6665194-fedora-38-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-psqn /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-psqn', '/var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn'... Running: git checkout 0b031220206424ed20cb1e07acdaa47cb614b27c -- cmd: ['git', 'checkout', '0b031220206424ed20cb1e07acdaa47cb614b27c', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn rc: 0 stdout: stderr: Note: switching to '0b031220206424ed20cb1e07acdaa47cb614b27c'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 0b03122 automatic import of R-CRAN-psqn Running: copr-distgit-client sources INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o psqn_0.3.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-psqn/psqn_0.3.1.tar.gz/md5/696c0cf9c266eb547cff9b238f90a081/psqn_0.3.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 180k 100 180k 0 0 2413k 0 --:--:-- --:--:-- --:--:-- 2436k INFO: Reading stdout from command: md5sum psqn_0.3.1.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn/R-CRAN-psqn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1700309121.690007 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn/R-CRAN-psqn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1700309121.690007 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn/R-CRAN-psqn.spec) Config(fedora-38-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.2 INFO: Mock Version: 5.2 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-38-x86_64-1700309121.690007/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 33 MB/s | 26 MB 00:00 fedora 338 kB/s | 83 MB 04:11 updates 258 kB/s | 35 MB 02:18 Last metadata expiration check: 0:00:05 ago on Sat Nov 18 12:10:27 2023. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.15-3.fc38 fedora 1.8 M bzip2 x86_64 1.0.8-13.fc38 fedora 52 k coreutils x86_64 9.1-12.fc38 updates 1.1 M cpio x86_64 2.13-14.fc38 fedora 276 k diffutils x86_64 3.10-1.fc38 updates 398 k fedora-release-common noarch 38-36 updates 22 k findutils x86_64 1:4.9.0-3.fc38 fedora 492 k gawk x86_64 5.1.1-5.fc38 fedora 1.0 M glibc-minimal-langpack x86_64 2.37-13.fc38 updates 39 k grep x86_64 3.8-3.fc38 fedora 293 k gzip x86_64 1.12-3.fc38 fedora 166 k info x86_64 7.0.2-2.fc38 fedora 181 k patch x86_64 2.7.6-19.fc38 fedora 126 k redhat-rpm-config noarch 255-1.fc38 updates 81 k rpm-build x86_64 4.18.1-3.fc38 updates 77 k sed x86_64 4.8-12.fc38 fedora 306 k shadow-utils x86_64 2:4.13-6.fc38 fedora 1.3 M tar x86_64 2:1.34-8.fc38 fedora 889 k unzip x86_64 6.0-60.fc38 fedora 184 k util-linux x86_64 2.38.1-4.fc38 fedora 2.3 M which x86_64 2.21-39.fc38 fedora 42 k xz x86_64 5.4.1-1.fc38 fedora 419 k Installing dependencies: alternatives x86_64 1.25-1.fc38 updates 38 k ansible-srpm-macros noarch 1-10.fc38 updates 21 k audit-libs x86_64 3.1.2-1.fc38 updates 117 k authselect x86_64 1.4.3-1.fc38 updates 149 k authselect-libs x86_64 1.4.3-1.fc38 updates 249 k basesystem noarch 11-15.fc38 fedora 7.0 k binutils x86_64 2.39-16.fc38 updates 5.4 M binutils-gold x86_64 2.39-16.fc38 updates 795 k bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-1.0.fc38 updates 837 k coreutils-common x86_64 9.1-12.fc38 updates 2.0 M cracklib x86_64 2.9.11-1.fc38 updates 93 k crypto-policies noarch 20230301-1.gita12f7b2.fc38 fedora 93 k curl x86_64 8.0.1-5.fc38 updates 348 k cyrus-sasl-lib x86_64 2.1.28-9.fc38 fedora 794 k debugedit x86_64 5.0-9.fc38 updates 78 k dwz x86_64 0.15-2.fc38 fedora 135 k ed x86_64 1.19-2.fc38 fedora 78 k efi-srpm-macros noarch 5-7.fc38 fedora 22 k elfutils x86_64 0.189-3.fc38 updates 533 k elfutils-debuginfod-client x86_64 0.189-3.fc38 updates 38 k elfutils-default-yama-scope noarch 0.189-3.fc38 updates 13 k elfutils-libelf x86_64 0.189-3.fc38 updates 195 k elfutils-libs x86_64 0.189-3.fc38 updates 258 k fedora-gpg-keys noarch 38-1 fedora 126 k fedora-release noarch 38-36 updates 12 k fedora-release-identity-basic noarch 38-36 updates 13 k fedora-repos noarch 38-1 fedora 9.1 k file x86_64 5.44-3.fc38 fedora 49 k file-libs x86_64 5.44-3.fc38 fedora 730 k filesystem x86_64 3.18-3.fc38 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 fedora 26 k fpc-srpm-macros noarch 1.3-7.fc38 fedora 7.8 k gdb-minimal x86_64 13.2-6.fc38 updates 4.2 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k ghc-srpm-macros noarch 1.6.1-1.fc38 fedora 8.0 k glibc x86_64 2.37-13.fc38 updates 2.1 M glibc-common x86_64 2.37-13.fc38 updates 319 k glibc-gconv-extra x86_64 2.37-13.fc38 updates 1.6 M gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnat-srpm-macros noarch 6-2.fc38 fedora 8.8 k go-srpm-macros noarch 3.2.0-2.fc38 fedora 27 k jansson x86_64 2.13.1-6.fc38 fedora 44 k kernel-srpm-macros noarch 1.0-19.fc38 updates 10 k keyutils-libs x86_64 1.6.1-6.fc38 fedora 31 k krb5-libs x86_64 1.21-3.fc38 updates 764 k libacl x86_64 2.3.1-6.fc38 fedora 23 k libarchive x86_64 3.6.1-4.fc38 fedora 400 k libattr x86_64 2.5.1-6.fc38 fedora 18 k libblkid x86_64 2.38.1-4.fc38 fedora 106 k libbrotli x86_64 1.0.9-11.fc38 fedora 317 k libcap x86_64 2.48-6.fc38 fedora 67 k libcap-ng x86_64 0.8.3-8.fc38 updates 32 k libcom_err x86_64 1.46.5-4.fc38 fedora 26 k libcurl x86_64 8.0.1-5.fc38 updates 312 k libdb x86_64 5.3.28-55.fc38 fedora 758 k libeconf x86_64 0.5.2-1.fc38 updates 30 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libfdisk x86_64 2.38.1-4.fc38 fedora 161 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libgcc x86_64 13.2.1-4.fc38 updates 111 k libgomp x86_64 13.2.1-4.fc38 updates 320 k libidn2 x86_64 2.3.4-2.fc38 fedora 160 k libmount x86_64 2.38.1-4.fc38 fedora 135 k libnghttp2 x86_64 1.52.0-2.fc38 updates 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpkgconf x86_64 1.8.0-6.fc38 fedora 35 k libpsl x86_64 0.21.2-2.fc38 fedora 65 k libpwquality x86_64 1.4.5-3.fc38 fedora 119 k libselinux x86_64 3.5-1.fc38 fedora 87 k libsemanage x86_64 3.5-2.fc38 fedora 120 k libsepol x86_64 3.5-1.fc38 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.38.1-4.fc38 fedora 64 k libssh x86_64 0.10.5-1.fc38 updates 211 k libssh-config noarch 0.10.5-1.fc38 updates 9.0 k libstdc++ x86_64 13.2.1-4.fc38 updates 865 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.4-0.fc38 updates 94 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libutempter x86_64 1.2.1-8.fc38 fedora 26 k libuuid x86_64 2.38.1-4.fc38 fedora 28 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.36-1.fc38 updates 119 k libxml2 x86_64 2.10.4-1.fc38 updates 701 k libzstd x86_64 1.5.5-1.fc38 updates 308 k lua-libs x86_64 5.4.4-9.fc38 fedora 133 k lua-srpm-macros noarch 1-8.fc38 fedora 8.6 k lz4-libs x86_64 1.9.4-2.fc38 fedora 67 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-3.20230114.fc38 fedora 87 k ncurses-libs x86_64 6.4-3.20230114.fc38 fedora 333 k ocaml-srpm-macros noarch 7-3.fc38 fedora 13 k openblas-srpm-macros noarch 2-13.fc38 fedora 7.5 k openldap x86_64 2.6.6-1.fc38 updates 254 k openssl-libs x86_64 1:3.0.9-2.fc38 updates 2.1 M p11-kit x86_64 0.25.2-1.fc38 updates 520 k p11-kit-trust x86_64 0.25.2-1.fc38 updates 140 k package-notes-srpm-macros noarch 0.5-8.fc38 updates 11 k pam x86_64 1.5.2-16.fc38 fedora 560 k pam-libs x86_64 1.5.2-16.fc38 fedora 58 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k perl-srpm-macros noarch 1-48.fc38 fedora 8.4 k pkgconf x86_64 1.8.0-6.fc38 fedora 41 k pkgconf-m4 noarch 1.8.0-6.fc38 fedora 14 k pkgconf-pkg-config x86_64 1.8.0-6.fc38 fedora 9.6 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20230812-1.fc38 updates 57 k pyproject-srpm-macros noarch 1.10.0-1.fc38 updates 14 k python-srpm-macros noarch 3.11-10.fc38 fedora 26 k qt5-srpm-macros noarch 5.15.11-1.fc38 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc38 updates 8.6 k readline x86_64 8.2-3.fc38 fedora 212 k rpm x86_64 4.18.1-3.fc38 updates 570 k rpm-build-libs x86_64 4.18.1-3.fc38 updates 94 k rpm-libs x86_64 4.18.1-3.fc38 updates 313 k rpm-sequoia x86_64 1.5.0-1.fc38 updates 884 k rpmautospec-rpm-macros noarch 0.3.5-1.fc38 fedora 9.3 k rust-srpm-macros noarch 25.2-2.fc38 updates 13 k setup noarch 2.14.3-2.fc38 fedora 152 k sqlite-libs x86_64 3.40.1-2.fc38 fedora 666 k systemd-libs x86_64 253.12-1.fc38 updates 652 k tzdata noarch 2023c-1.fc38 fedora 718 k util-linux-core x86_64 2.38.1-4.fc38 fedora 473 k xxhash-libs x86_64 0.8.2-1.fc38 updates 37 k xz-libs x86_64 5.4.1-1.fc38 fedora 108 k zip x86_64 3.0-37.fc38 updates 265 k zlib x86_64 1.2.13-3.fc38 fedora 95 k zstd x86_64 1.5.5-1.fc38 updates 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 152 Packages Total download size: 53 M Installed size: 185 M Downloading Packages: (1/152): basesystem-11-15.fc38.noarch.rpm 33 kB/s | 7.0 kB 00:00 (2/152): bzip2-libs-1.0.8-13.fc38.x86_64.rpm 259 kB/s | 41 kB 00:00 (3/152): cpio-2.13-14.fc38.x86_64.rpm 841 kB/s | 276 kB 00:00 (4/152): bzip2-1.0.8-13.fc38.x86_64.rpm 70 kB/s | 52 kB 00:00 (5/152): crypto-policies-20230301-1.gita12f7b2. 1.5 MB/s | 93 kB 00:00 (6/152): bash-5.2.15-3.fc38.x86_64.rpm 2.3 MB/s | 1.8 MB 00:00 (7/152): dwz-0.15-2.fc38.x86_64.rpm 1.9 MB/s | 135 kB 00:00 (8/152): ed-1.19-2.fc38.x86_64.rpm 1.8 MB/s | 78 kB 00:00 (9/152): efi-srpm-macros-5-7.fc38.noarch.rpm 560 kB/s | 22 kB 00:00 (10/152): fedora-gpg-keys-38-1.noarch.rpm 2.9 MB/s | 126 kB 00:00 (11/152): fedora-repos-38-1.noarch.rpm 248 kB/s | 9.1 kB 00:00 (12/152): file-5.44-3.fc38.x86_64.rpm 1.2 MB/s | 49 kB 00:00 (13/152): cyrus-sasl-lib-2.1.28-9.fc38.x86_64.r 3.5 MB/s | 794 kB 00:00 (14/152): filesystem-3.18-3.fc38.x86_64.rpm 16 MB/s | 1.1 MB 00:00 (15/152): findutils-4.9.0-3.fc38.x86_64.rpm 8.8 MB/s | 492 kB 00:00 (16/152): fonts-srpm-macros-2.0.5-11.fc38.noarc 673 kB/s | 26 kB 00:00 (17/152): file-libs-5.44-3.fc38.x86_64.rpm 5.6 MB/s | 730 kB 00:00 (18/152): fpc-srpm-macros-1.3-7.fc38.noarch.rpm 202 kB/s | 7.8 kB 00:00 (19/152): gdbm-libs-1.23-3.fc38.x86_64.rpm 1.4 MB/s | 56 kB 00:00 (20/152): gawk-5.1.1-5.fc38.x86_64.rpm 16 MB/s | 1.0 MB 00:00 (21/152): ghc-srpm-macros-1.6.1-1.fc38.noarch.r 207 kB/s | 8.0 kB 00:00 (22/152): gmp-6.2.1-4.fc38.x86_64.rpm 6.7 MB/s | 313 kB 00:00 (23/152): gnat-srpm-macros-6-2.fc38.noarch.rpm 225 kB/s | 8.8 kB 00:00 (24/152): go-srpm-macros-3.2.0-2.fc38.noarch.rp 670 kB/s | 27 kB 00:00 (25/152): grep-3.8-3.fc38.x86_64.rpm 6.4 MB/s | 293 kB 00:00 (26/152): gzip-1.12-3.fc38.x86_64.rpm 3.8 MB/s | 166 kB 00:00 (27/152): info-7.0.2-2.fc38.x86_64.rpm 4.0 MB/s | 181 kB 00:00 (28/152): jansson-2.13.1-6.fc38.x86_64.rpm 1.2 MB/s | 44 kB 00:00 (29/152): keyutils-libs-1.6.1-6.fc38.x86_64.rpm 792 kB/s | 31 kB 00:00 (30/152): libacl-2.3.1-6.fc38.x86_64.rpm 594 kB/s | 23 kB 00:00 (31/152): libarchive-3.6.1-4.fc38.x86_64.rpm 8.0 MB/s | 400 kB 00:00 (32/152): libattr-2.5.1-6.fc38.x86_64.rpm 458 kB/s | 18 kB 00:00 (33/152): libblkid-2.38.1-4.fc38.x86_64.rpm 2.5 MB/s | 106 kB 00:00 (34/152): libcap-2.48-6.fc38.x86_64.rpm 1.6 MB/s | 67 kB 00:00 (35/152): libbrotli-1.0.9-11.fc38.x86_64.rpm 6.7 MB/s | 317 kB 00:00 (36/152): libcom_err-1.46.5-4.fc38.x86_64.rpm 661 kB/s | 26 kB 00:00 (37/152): libevent-2.1.12-8.fc38.x86_64.rpm 5.4 MB/s | 257 kB 00:00 (38/152): libdb-5.3.28-55.fc38.x86_64.rpm 12 MB/s | 758 kB 00:00 (39/152): libfdisk-2.38.1-4.fc38.x86_64.rpm 3.2 MB/s | 161 kB 00:00 (40/152): libffi-3.4.4-2.fc38.x86_64.rpm 944 kB/s | 38 kB 00:00 (41/152): libidn2-2.3.4-2.fc38.x86_64.rpm 3.7 MB/s | 160 kB 00:00 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Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-3.fc38.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-4.fc38.x86_64 1/152 Running scriptlet: libgcc-13.2.1-4.fc38.x86_64 1/152 Installing : crypto-policies-20230301-1.gita12f7b2.fc38.noarc 2/152 Running scriptlet: crypto-policies-20230301-1.gita12f7b2.fc38.noarc 2/152 Installing : fedora-release-identity-basic-38-36.noarch 3/152 Installing : tzdata-2023c-1.fc38.noarch 4/152 Installing : rust-srpm-macros-25.2-2.fc38.noarch 5/152 Installing : qt6-srpm-macros-6.6.0-1.fc38.noarch 6/152 Installing : qt5-srpm-macros-5.15.11-1.fc38.noarch 7/152 Installing : publicsuffix-list-dafsa-20230812-1.fc38.noarch 8/152 Installing : package-notes-srpm-macros-0.5-8.fc38.noarch 9/152 Installing : libssh-config-0.10.5-1.fc38.noarch 10/152 Installing : kernel-srpm-macros-1.0-19.fc38.noarch 11/152 Installing : coreutils-common-9.1-12.fc38.x86_64 12/152 Installing : ansible-srpm-macros-1-10.fc38.noarch 13/152 Installing : 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ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 103/152 Installing : ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 103/152 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 103/152 Installing : gzip-1.12-3.fc38.x86_64 104/152 Running scriptlet: authselect-libs-1.4.3-1.fc38.x86_64 105/152 Installing : authselect-libs-1.4.3-1.fc38.x86_64 105/152 Installing : rpm-sequoia-1.5.0-1.fc38.x86_64 106/152 Installing : rpm-libs-4.18.1-3.fc38.x86_64 107/152 Installing : authselect-1.4.3-1.fc38.x86_64 108/152 Installing : cracklib-2.9.11-1.fc38.x86_64 109/152 Installing : libpwquality-1.4.5-3.fc38.x86_64 110/152 Installing : libarchive-3.6.1-4.fc38.x86_64 111/152 Installing : libevent-2.1.12-8.fc38.x86_64 112/152 Installing : openldap-2.6.6-1.fc38.x86_64 113/152 Installing : libpkgconf-1.8.0-6.fc38.x86_64 114/152 Installing : pkgconf-1.8.0-6.fc38.x86_64 115/152 Installing : pkgconf-pkg-config-1.8.0-6.fc38.x86_64 116/152 Installing : libsigsegv-2.14-4.fc38.x86_64 117/152 Installing : gawk-5.1.1-5.fc38.x86_64 118/152 Installing : libverto-0.3.2-5.fc38.x86_64 119/152 Installing : krb5-libs-1.21-3.fc38.x86_64 120/152 Installing : libtirpc-1.3.4-0.fc38.x86_64 121/152 Installing : libnsl2-2.0.0-5.fc38.x86_64 122/152 Installing : pam-1.5.2-16.fc38.x86_64 123/152 Installing : libssh-0.10.5-1.fc38.x86_64 124/152 Installing : diffutils-3.10-1.fc38.x86_64 125/152 Installing : libgomp-13.2.1-4.fc38.x86_64 126/152 Installing : libnghttp2-1.52.0-2.fc38.x86_64 127/152 Installing : libcurl-8.0.1-5.fc38.x86_64 128/152 Installing : curl-8.0.1-5.fc38.x86_64 129/152 Running scriptlet: rpm-4.18.1-3.fc38.x86_64 130/152 Installing : rpm-4.18.1-3.fc38.x86_64 130/152 Installing : efi-srpm-macros-5-7.fc38.noarch 131/152 Installing : lua-srpm-macros-1-8.fc38.noarch 132/152 Installing : rpmautospec-rpm-macros-0.3.5-1.fc38.noarch 133/152 Installing : xxhash-libs-0.8.2-1.fc38.x86_64 134/152 Installing : elfutils-default-yama-scope-0.189-3.fc38.noarch 135/152 Running scriptlet: elfutils-default-yama-scope-0.189-3.fc38.noarch 135/152 Installing : elfutils-libs-0.189-3.fc38.x86_64 136/152 Installing : elfutils-debuginfod-client-0.189-3.fc38.x86_64 137/152 Installing : binutils-gold-2.39-16.fc38.x86_64 138/152 Installing : binutils-2.39-16.fc38.x86_64 139/152 Running scriptlet: binutils-2.39-16.fc38.x86_64 139/152 Installing : elfutils-0.189-3.fc38.x86_64 140/152 Installing : gdb-minimal-13.2-6.fc38.x86_64 141/152 Installing : debugedit-5.0-9.fc38.x86_64 142/152 Installing : rpm-build-libs-4.18.1-3.fc38.x86_64 143/152 Installing : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 144/152 Installing : go-srpm-macros-3.2.0-2.fc38.noarch 145/152 Installing : python-srpm-macros-3.11-10.fc38.noarch 146/152 Installing : redhat-rpm-config-255-1.fc38.noarch 147/152 Installing : rpm-build-4.18.1-3.fc38.x86_64 148/152 Installing : pyproject-srpm-macros-1.10.0-1.fc38.noarch 149/152 Installing : util-linux-2.38.1-4.fc38.x86_64 150/152 Installing : which-2.21-39.fc38.x86_64 151/152 Installing : info-7.0.2-2.fc38.x86_64 152/152 Running scriptlet: filesystem-3.18-3.fc38.x86_64 152/152 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 152/152 Running scriptlet: authselect-libs-1.4.3-1.fc38.x86_64 152/152 Running scriptlet: rpm-4.18.1-3.fc38.x86_64 152/152 Running scriptlet: info-7.0.2-2.fc38.x86_64 152/152 Verifying : basesystem-11-15.fc38.noarch 1/152 Verifying : bash-5.2.15-3.fc38.x86_64 2/152 Verifying : bzip2-1.0.8-13.fc38.x86_64 3/152 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 4/152 Verifying : cpio-2.13-14.fc38.x86_64 5/152 Verifying : crypto-policies-20230301-1.gita12f7b2.fc38.noarc 6/152 Verifying : cyrus-sasl-lib-2.1.28-9.fc38.x86_64 7/152 Verifying : dwz-0.15-2.fc38.x86_64 8/152 Verifying : ed-1.19-2.fc38.x86_64 9/152 Verifying : efi-srpm-macros-5-7.fc38.noarch 10/152 Verifying : fedora-gpg-keys-38-1.noarch 11/152 Verifying : fedora-repos-38-1.noarch 12/152 Verifying : file-5.44-3.fc38.x86_64 13/152 Verifying : file-libs-5.44-3.fc38.x86_64 14/152 Verifying : filesystem-3.18-3.fc38.x86_64 15/152 Verifying : findutils-1:4.9.0-3.fc38.x86_64 16/152 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 17/152 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 18/152 Verifying : gawk-5.1.1-5.fc38.x86_64 19/152 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 20/152 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 21/152 Verifying : gmp-1:6.2.1-4.fc38.x86_64 22/152 Verifying : gnat-srpm-macros-6-2.fc38.noarch 23/152 Verifying : go-srpm-macros-3.2.0-2.fc38.noarch 24/152 Verifying : grep-3.8-3.fc38.x86_64 25/152 Verifying : gzip-1.12-3.fc38.x86_64 26/152 Verifying : info-7.0.2-2.fc38.x86_64 27/152 Verifying : jansson-2.13.1-6.fc38.x86_64 28/152 Verifying : keyutils-libs-1.6.1-6.fc38.x86_64 29/152 Verifying : libacl-2.3.1-6.fc38.x86_64 30/152 Verifying : libarchive-3.6.1-4.fc38.x86_64 31/152 Verifying : libattr-2.5.1-6.fc38.x86_64 32/152 Verifying : libblkid-2.38.1-4.fc38.x86_64 33/152 Verifying : libbrotli-1.0.9-11.fc38.x86_64 34/152 Verifying : libcap-2.48-6.fc38.x86_64 35/152 Verifying : libcom_err-1.46.5-4.fc38.x86_64 36/152 Verifying : libdb-5.3.28-55.fc38.x86_64 37/152 Verifying : libevent-2.1.12-8.fc38.x86_64 38/152 Verifying : libfdisk-2.38.1-4.fc38.x86_64 39/152 Verifying : libffi-3.4.4-2.fc38.x86_64 40/152 Verifying : libidn2-2.3.4-2.fc38.x86_64 41/152 Verifying : libmount-2.38.1-4.fc38.x86_64 42/152 Verifying : libnsl2-2.0.0-5.fc38.x86_64 43/152 Verifying : libpkgconf-1.8.0-6.fc38.x86_64 44/152 Verifying : libpsl-0.21.2-2.fc38.x86_64 45/152 Verifying : libpwquality-1.4.5-3.fc38.x86_64 46/152 Verifying : libselinux-3.5-1.fc38.x86_64 47/152 Verifying : libsemanage-3.5-2.fc38.x86_64 48/152 Verifying : libsepol-3.5-1.fc38.x86_64 49/152 Verifying : libsigsegv-2.14-4.fc38.x86_64 50/152 Verifying : libsmartcols-2.38.1-4.fc38.x86_64 51/152 Verifying : libtasn1-4.19.0-2.fc38.x86_64 52/152 Verifying : libunistring1.0-1.0-1.fc38.x86_64 53/152 Verifying : libutempter-1.2.1-8.fc38.x86_64 54/152 Verifying : libuuid-2.38.1-4.fc38.x86_64 55/152 Verifying : libverto-0.3.2-5.fc38.x86_64 56/152 Verifying : lua-libs-5.4.4-9.fc38.x86_64 57/152 Verifying : lua-srpm-macros-1-8.fc38.noarch 58/152 Verifying : lz4-libs-1.9.4-2.fc38.x86_64 59/152 Verifying : mpfr-4.1.1-3.fc38.x86_64 60/152 Verifying : ncurses-base-6.4-3.20230114.fc38.noarch 61/152 Verifying : ncurses-libs-6.4-3.20230114.fc38.x86_64 62/152 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 63/152 Verifying : openblas-srpm-macros-2-13.fc38.noarch 64/152 Verifying : pam-1.5.2-16.fc38.x86_64 65/152 Verifying : pam-libs-1.5.2-16.fc38.x86_64 66/152 Verifying : patch-2.7.6-19.fc38.x86_64 67/152 Verifying : pcre2-10.42-1.fc38.1.x86_64 68/152 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 69/152 Verifying : perl-srpm-macros-1-48.fc38.noarch 70/152 Verifying : pkgconf-1.8.0-6.fc38.x86_64 71/152 Verifying : pkgconf-m4-1.8.0-6.fc38.noarch 72/152 Verifying : pkgconf-pkg-config-1.8.0-6.fc38.x86_64 73/152 Verifying : popt-1.19-2.fc38.x86_64 74/152 Verifying : python-srpm-macros-3.11-10.fc38.noarch 75/152 Verifying : readline-8.2-3.fc38.x86_64 76/152 Verifying : rpmautospec-rpm-macros-0.3.5-1.fc38.noarch 77/152 Verifying : sed-4.8-12.fc38.x86_64 78/152 Verifying : setup-2.14.3-2.fc38.noarch 79/152 Verifying : shadow-utils-2:4.13-6.fc38.x86_64 80/152 Verifying : sqlite-libs-3.40.1-2.fc38.x86_64 81/152 Verifying : tar-2:1.34-8.fc38.x86_64 82/152 Verifying : tzdata-2023c-1.fc38.noarch 83/152 Verifying : unzip-6.0-60.fc38.x86_64 84/152 Verifying : util-linux-2.38.1-4.fc38.x86_64 85/152 Verifying : util-linux-core-2.38.1-4.fc38.x86_64 86/152 Verifying : which-2.21-39.fc38.x86_64 87/152 Verifying : xz-5.4.1-1.fc38.x86_64 88/152 Verifying : xz-libs-5.4.1-1.fc38.x86_64 89/152 Verifying : zlib-1.2.13-3.fc38.x86_64 90/152 Verifying : alternatives-1.25-1.fc38.x86_64 91/152 Verifying : ansible-srpm-macros-1-10.fc38.noarch 92/152 Verifying : audit-libs-3.1.2-1.fc38.x86_64 93/152 Verifying : authselect-1.4.3-1.fc38.x86_64 94/152 Verifying : authselect-libs-1.4.3-1.fc38.x86_64 95/152 Verifying : binutils-2.39-16.fc38.x86_64 96/152 Verifying : binutils-gold-2.39-16.fc38.x86_64 97/152 Verifying : ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 98/152 Verifying : coreutils-9.1-12.fc38.x86_64 99/152 Verifying : coreutils-common-9.1-12.fc38.x86_64 100/152 Verifying : cracklib-2.9.11-1.fc38.x86_64 101/152 Verifying : curl-8.0.1-5.fc38.x86_64 102/152 Verifying : debugedit-5.0-9.fc38.x86_64 103/152 Verifying : diffutils-3.10-1.fc38.x86_64 104/152 Verifying : elfutils-0.189-3.fc38.x86_64 105/152 Verifying : elfutils-debuginfod-client-0.189-3.fc38.x86_64 106/152 Verifying : elfutils-default-yama-scope-0.189-3.fc38.noarch 107/152 Verifying : elfutils-libelf-0.189-3.fc38.x86_64 108/152 Verifying : elfutils-libs-0.189-3.fc38.x86_64 109/152 Verifying : fedora-release-38-36.noarch 110/152 Verifying : fedora-release-common-38-36.noarch 111/152 Verifying : fedora-release-identity-basic-38-36.noarch 112/152 Verifying : gdb-minimal-13.2-6.fc38.x86_64 113/152 Verifying : glibc-2.37-13.fc38.x86_64 114/152 Verifying : glibc-common-2.37-13.fc38.x86_64 115/152 Verifying : glibc-gconv-extra-2.37-13.fc38.x86_64 116/152 Verifying : glibc-minimal-langpack-2.37-13.fc38.x86_64 117/152 Verifying : kernel-srpm-macros-1.0-19.fc38.noarch 118/152 Verifying : krb5-libs-1.21-3.fc38.x86_64 119/152 Verifying : libcap-ng-0.8.3-8.fc38.x86_64 120/152 Verifying : libcurl-8.0.1-5.fc38.x86_64 121/152 Verifying : libeconf-0.5.2-1.fc38.x86_64 122/152 Verifying : libgcc-13.2.1-4.fc38.x86_64 123/152 Verifying : libgomp-13.2.1-4.fc38.x86_64 124/152 Verifying : libnghttp2-1.52.0-2.fc38.x86_64 125/152 Verifying : libssh-0.10.5-1.fc38.x86_64 126/152 Verifying : libssh-config-0.10.5-1.fc38.noarch 127/152 Verifying : libstdc++-13.2.1-4.fc38.x86_64 128/152 Verifying : libtirpc-1.3.4-0.fc38.x86_64 129/152 Verifying : libxcrypt-4.4.36-1.fc38.x86_64 130/152 Verifying : libxml2-2.10.4-1.fc38.x86_64 131/152 Verifying : libzstd-1.5.5-1.fc38.x86_64 132/152 Verifying : openldap-2.6.6-1.fc38.x86_64 133/152 Verifying : openssl-libs-1:3.0.9-2.fc38.x86_64 134/152 Verifying : p11-kit-0.25.2-1.fc38.x86_64 135/152 Verifying : p11-kit-trust-0.25.2-1.fc38.x86_64 136/152 Verifying : package-notes-srpm-macros-0.5-8.fc38.noarch 137/152 Verifying : publicsuffix-list-dafsa-20230812-1.fc38.noarch 138/152 Verifying : pyproject-srpm-macros-1.10.0-1.fc38.noarch 139/152 Verifying : qt5-srpm-macros-5.15.11-1.fc38.noarch 140/152 Verifying : qt6-srpm-macros-6.6.0-1.fc38.noarch 141/152 Verifying : redhat-rpm-config-255-1.fc38.noarch 142/152 Verifying : rpm-4.18.1-3.fc38.x86_64 143/152 Verifying : rpm-build-4.18.1-3.fc38.x86_64 144/152 Verifying : rpm-build-libs-4.18.1-3.fc38.x86_64 145/152 Verifying : rpm-libs-4.18.1-3.fc38.x86_64 146/152 Verifying : rpm-sequoia-1.5.0-1.fc38.x86_64 147/152 Verifying : rust-srpm-macros-25.2-2.fc38.noarch 148/152 Verifying : systemd-libs-253.12-1.fc38.x86_64 149/152 Verifying : xxhash-libs-0.8.2-1.fc38.x86_64 150/152 Verifying : zip-3.0-37.fc38.x86_64 151/152 Verifying : zstd-1.5.5-1.fc38.x86_64 152/152 Installed products updated. Installed: alternatives-1.25-1.fc38.x86_64 ansible-srpm-macros-1-10.fc38.noarch audit-libs-3.1.2-1.fc38.x86_64 authselect-1.4.3-1.fc38.x86_64 authselect-libs-1.4.3-1.fc38.x86_64 basesystem-11-15.fc38.noarch bash-5.2.15-3.fc38.x86_64 binutils-2.39-16.fc38.x86_64 binutils-gold-2.39-16.fc38.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noarch coreutils-9.1-12.fc38.x86_64 coreutils-common-9.1-12.fc38.x86_64 cpio-2.13-14.fc38.x86_64 cracklib-2.9.11-1.fc38.x86_64 crypto-policies-20230301-1.gita12f7b2.fc38.noarch curl-8.0.1-5.fc38.x86_64 cyrus-sasl-lib-2.1.28-9.fc38.x86_64 debugedit-5.0-9.fc38.x86_64 diffutils-3.10-1.fc38.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-7.fc38.noarch elfutils-0.189-3.fc38.x86_64 elfutils-debuginfod-client-0.189-3.fc38.x86_64 elfutils-default-yama-scope-0.189-3.fc38.noarch elfutils-libelf-0.189-3.fc38.x86_64 elfutils-libs-0.189-3.fc38.x86_64 fedora-gpg-keys-38-1.noarch fedora-release-38-36.noarch fedora-release-common-38-36.noarch fedora-release-identity-basic-38-36.noarch fedora-repos-38-1.noarch file-5.44-3.fc38.x86_64 file-libs-5.44-3.fc38.x86_64 filesystem-3.18-3.fc38.x86_64 findutils-1:4.9.0-3.fc38.x86_64 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.1.1-5.fc38.x86_64 gdb-minimal-13.2-6.fc38.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37-13.fc38.x86_64 glibc-common-2.37-13.fc38.x86_64 glibc-gconv-extra-2.37-13.fc38.x86_64 glibc-minimal-langpack-2.37-13.fc38.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-2.fc38.noarch grep-3.8-3.fc38.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.2-2.fc38.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc38.noarch keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-3.fc38.x86_64 libacl-2.3.1-6.fc38.x86_64 libarchive-3.6.1-4.fc38.x86_64 libattr-2.5.1-6.fc38.x86_64 libblkid-2.38.1-4.fc38.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-8.fc38.x86_64 libcom_err-1.46.5-4.fc38.x86_64 libcurl-8.0.1-5.fc38.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.5.2-1.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.38.1-4.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.2.1-4.fc38.x86_64 libgomp-13.2.1-4.fc38.x86_64 libidn2-2.3.4-2.fc38.x86_64 libmount-2.38.1-4.fc38.x86_64 libnghttp2-1.52.0-2.fc38.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.8.0-6.fc38.x86_64 libpsl-0.21.2-2.fc38.x86_64 libpwquality-1.4.5-3.fc38.x86_64 libselinux-3.5-1.fc38.x86_64 libsemanage-3.5-2.fc38.x86_64 libsepol-3.5-1.fc38.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.38.1-4.fc38.x86_64 libssh-0.10.5-1.fc38.x86_64 libssh-config-0.10.5-1.fc38.noarch libstdc++-13.2.1-4.fc38.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.4-0.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-8.fc38.x86_64 libuuid-2.38.1-4.fc38.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.36-1.fc38.x86_64 libxml2-2.10.4-1.fc38.x86_64 libzstd-1.5.5-1.fc38.x86_64 lua-libs-5.4.4-9.fc38.x86_64 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-2.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-3.20230114.fc38.noarch ncurses-libs-6.4-3.20230114.fc38.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.6-1.fc38.x86_64 openssl-libs-1:3.0.9-2.fc38.x86_64 p11-kit-0.25.2-1.fc38.x86_64 p11-kit-trust-0.25.2-1.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc38.noarch pam-1.5.2-16.fc38.x86_64 pam-libs-1.5.2-16.fc38.x86_64 patch-2.7.6-19.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.8.0-6.fc38.x86_64 pkgconf-m4-1.8.0-6.fc38.noarch pkgconf-pkg-config-1.8.0-6.fc38.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230812-1.fc38.noarch pyproject-srpm-macros-1.10.0-1.fc38.noarch python-srpm-macros-3.11-10.fc38.noarch qt5-srpm-macros-5.15.11-1.fc38.noarch qt6-srpm-macros-6.6.0-1.fc38.noarch readline-8.2-3.fc38.x86_64 redhat-rpm-config-255-1.fc38.noarch rpm-4.18.1-3.fc38.x86_64 rpm-build-4.18.1-3.fc38.x86_64 rpm-build-libs-4.18.1-3.fc38.x86_64 rpm-libs-4.18.1-3.fc38.x86_64 rpm-sequoia-1.5.0-1.fc38.x86_64 rpmautospec-rpm-macros-0.3.5-1.fc38.noarch rust-srpm-macros-25.2-2.fc38.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-2.fc38.noarch shadow-utils-2:4.13-6.fc38.x86_64 sqlite-libs-3.40.1-2.fc38.x86_64 systemd-libs-253.12-1.fc38.x86_64 tar-2:1.34-8.fc38.x86_64 tzdata-2023c-1.fc38.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.38.1-4.fc38.x86_64 util-linux-core-2.38.1-4.fc38.x86_64 which-2.21-39.fc38.x86_64 xxhash-libs-0.8.2-1.fc38.x86_64 xz-5.4.1-1.fc38.x86_64 xz-libs-5.4.1-1.fc38.x86_64 zip-3.0-37.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc38.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc38.x86_64 ansible-srpm-macros-1-10.fc38.noarch audit-libs-3.1.2-1.fc38.x86_64 authselect-1.4.3-1.fc38.x86_64 authselect-libs-1.4.3-1.fc38.x86_64 basesystem-11-15.fc38.noarch bash-5.2.15-3.fc38.x86_64 binutils-2.39-16.fc38.x86_64 binutils-gold-2.39-16.fc38.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noarch coreutils-9.1-12.fc38.x86_64 coreutils-common-9.1-12.fc38.x86_64 cpio-2.13-14.fc38.x86_64 cracklib-2.9.11-1.fc38.x86_64 crypto-policies-20230301-1.gita12f7b2.fc38.noarch curl-8.0.1-5.fc38.x86_64 cyrus-sasl-lib-2.1.28-9.fc38.x86_64 debugedit-5.0-9.fc38.x86_64 diffutils-3.10-1.fc38.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-7.fc38.noarch elfutils-0.189-3.fc38.x86_64 elfutils-debuginfod-client-0.189-3.fc38.x86_64 elfutils-default-yama-scope-0.189-3.fc38.noarch elfutils-libelf-0.189-3.fc38.x86_64 elfutils-libs-0.189-3.fc38.x86_64 fedora-gpg-keys-38-1.noarch fedora-release-38-36.noarch fedora-release-common-38-36.noarch fedora-release-identity-basic-38-36.noarch fedora-repos-38-1.noarch file-5.44-3.fc38.x86_64 file-libs-5.44-3.fc38.x86_64 filesystem-3.18-3.fc38.x86_64 findutils-4.9.0-3.fc38.x86_64 fonts-srpm-macros-2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.1.1-5.fc38.x86_64 gdb-minimal-13.2-6.fc38.x86_64 gdbm-libs-1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37-13.fc38.x86_64 glibc-common-2.37-13.fc38.x86_64 glibc-gconv-extra-2.37-13.fc38.x86_64 glibc-minimal-langpack-2.37-13.fc38.x86_64 gmp-6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-2.fc38.noarch gpg-pubkey-eb10b464-6202d9c6 grep-3.8-3.fc38.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.2-2.fc38.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc38.noarch keyutils-libs-1.6.1-6.fc38.x86_64 krb5-libs-1.21-3.fc38.x86_64 libacl-2.3.1-6.fc38.x86_64 libarchive-3.6.1-4.fc38.x86_64 libattr-2.5.1-6.fc38.x86_64 libblkid-2.38.1-4.fc38.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-6.fc38.x86_64 libcap-ng-0.8.3-8.fc38.x86_64 libcom_err-1.46.5-4.fc38.x86_64 libcurl-8.0.1-5.fc38.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.5.2-1.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.38.1-4.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.2.1-4.fc38.x86_64 libgomp-13.2.1-4.fc38.x86_64 libidn2-2.3.4-2.fc38.x86_64 libmount-2.38.1-4.fc38.x86_64 libnghttp2-1.52.0-2.fc38.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.8.0-6.fc38.x86_64 libpsl-0.21.2-2.fc38.x86_64 libpwquality-1.4.5-3.fc38.x86_64 libselinux-3.5-1.fc38.x86_64 libsemanage-3.5-2.fc38.x86_64 libsepol-3.5-1.fc38.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.38.1-4.fc38.x86_64 libssh-0.10.5-1.fc38.x86_64 libssh-config-0.10.5-1.fc38.noarch libstdc++-13.2.1-4.fc38.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.4-0.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-8.fc38.x86_64 libuuid-2.38.1-4.fc38.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.36-1.fc38.x86_64 libxml2-2.10.4-1.fc38.x86_64 libzstd-1.5.5-1.fc38.x86_64 lua-libs-5.4.4-9.fc38.x86_64 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-2.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-3.20230114.fc38.noarch ncurses-libs-6.4-3.20230114.fc38.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.6-1.fc38.x86_64 openssl-libs-3.0.9-2.fc38.x86_64 p11-kit-0.25.2-1.fc38.x86_64 p11-kit-trust-0.25.2-1.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc38.noarch pam-1.5.2-16.fc38.x86_64 pam-libs-1.5.2-16.fc38.x86_64 patch-2.7.6-19.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.8.0-6.fc38.x86_64 pkgconf-m4-1.8.0-6.fc38.noarch pkgconf-pkg-config-1.8.0-6.fc38.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20230812-1.fc38.noarch pyproject-srpm-macros-1.10.0-1.fc38.noarch python-srpm-macros-3.11-10.fc38.noarch qt5-srpm-macros-5.15.11-1.fc38.noarch qt6-srpm-macros-6.6.0-1.fc38.noarch readline-8.2-3.fc38.x86_64 redhat-rpm-config-255-1.fc38.noarch rpm-4.18.1-3.fc38.x86_64 rpm-build-4.18.1-3.fc38.x86_64 rpm-build-libs-4.18.1-3.fc38.x86_64 rpm-libs-4.18.1-3.fc38.x86_64 rpm-sequoia-1.5.0-1.fc38.x86_64 rpmautospec-rpm-macros-0.3.5-1.fc38.noarch rust-srpm-macros-25.2-2.fc38.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-2.fc38.noarch shadow-utils-4.13-6.fc38.x86_64 sqlite-libs-3.40.1-2.fc38.x86_64 systemd-libs-253.12-1.fc38.x86_64 tar-1.34-8.fc38.x86_64 tzdata-2023c-1.fc38.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.38.1-4.fc38.x86_64 util-linux-core-2.38.1-4.fc38.x86_64 which-2.21-39.fc38.x86_64 xxhash-libs-0.8.2-1.fc38.x86_64 xz-5.4.1-1.fc38.x86_64 xz-libs-5.4.1-1.fc38.x86_64 zip-3.0-37.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc38.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.rpm.log /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.librepo.log /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-uqlsze5r/R-CRAN-psqn/R-CRAN-psqn.spec) Config(child) 7 minutes 21 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm) Config(fedora-38-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-38-x86_64-1700309121.690007/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.18.1-3.fc38.x86_64 rpm-sequoia-1.4.0-3.fc38.x86_64 python3-dnf-4.18.1-1.fc38.noarch python3-dnf-plugins-core-4.4.3-1.fc38.noarch yum-4.18.1-1.fc38.noarch Start: build phase for R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm Start: build setup for R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 29 kB/s | 1.5 kB 00:00 Copr repository 28 MB/s | 26 MB 00:00 fedora 570 kB/s | 25 kB 00:00 updates 220 kB/s | 9.7 kB 00:00 Dependencies resolved. ======================================================================================== Package Arch Version Repo Size ======================================================================================== Installing: R-CRAN-Matrix x86_64 1.6.3-1.fc38.copr6636945 copr_base 4.1 M R-CRAN-Rcpp x86_64 1.0.11-1.fc38.copr6148288 copr_base 2.0 M R-CRAN-RcppEigen x86_64 0.3.3.9.4-1.fc38.copr6596539 copr_base 1.2 M R-CRAN-testthat x86_64 3.2.0-1.fc38.copr6501172 copr_base 1.7 M R-devel x86_64 4.3.2-1.fc38 updates 9.9 k Installing dependencies: R-CRAN-R6 noarch 2.5.1-1.fc38.copr5812135 copr_base 96 k R-CRAN-brio x86_64 1.1.3-1.fc38.copr5814660 copr_base 47 k R-CRAN-callr noarch 3.7.3-1.fc38.copr5817800 copr_base 433 k R-CRAN-cli x86_64 3.6.1-1.fc38.copr5812158 copr_base 1.3 M R-CRAN-crayon noarch 1.5.2-1.fc38.copr5812139 copr_base 182 k R-CRAN-desc noarch 1.4.2-1.fc38.copr5815615 copr_base 352 k R-CRAN-diffobj x86_64 0.3.5-1.fc38.copr5815679 copr_base 1.0 M R-CRAN-digest x86_64 0.6.33-1.fc38.copr6150922 copr_base 216 k R-CRAN-ellipsis x86_64 0.3.2-1.fc38.copr5815610 copr_base 49 k R-CRAN-evaluate noarch 0.23-1.fc38.copr6589765 copr_base 98 k R-CRAN-fansi x86_64 1.0.5-1.fc38.copr6506680 copr_base 340 k R-CRAN-fs x86_64 1.6.3-1.fc38.copr6193673 copr_base 312 k R-CRAN-glue x86_64 1.6.2-1.fc38.copr5812116 copr_base 162 k R-CRAN-jsonlite x86_64 1.8.7-1.fc38.copr6127729 copr_base 637 k R-CRAN-lattice x86_64 0.22.5-1.fc38.copr6562879 copr_base 1.4 M R-CRAN-lifecycle noarch 1.0.4-1.fc38.copr6614518 copr_base 131 k R-CRAN-magrittr x86_64 2.0.3-1.fc38.copr5812133 copr_base 222 k R-CRAN-pillar noarch 1.9.0-1.fc38.copr5819458 copr_base 624 k R-CRAN-pkgbuild noarch 1.4.2-1.fc38.copr6116915 copr_base 203 k R-CRAN-pkgconfig noarch 2.0.3-3.fc38.copr5812134 copr_base 30 k R-CRAN-pkgload noarch 1.3.3-1.fc38.copr6437975 copr_base 200 k R-CRAN-praise noarch 1.0.0-3.fc38.copr5812240 copr_base 28 k R-CRAN-prettyunits noarch 1.2.0-1.fc38.copr6439833 copr_base 169 k R-CRAN-processx x86_64 3.8.2-1.fc38.copr6131588 copr_base 356 k R-CRAN-ps x86_64 1.7.5-1.fc38.copr5812153 copr_base 338 k R-CRAN-rematch2 noarch 2.1.2-3.fc38.copr5826107 copr_base 59 k R-CRAN-rlang x86_64 1.1.2-1.fc38.copr6598950 copr_base 1.6 M R-CRAN-rprojroot noarch 2.0.4-1.fc38.copr6601156 copr_base 121 k R-CRAN-tibble x86_64 3.2.1-1.fc38.copr5821162 copr_base 632 k R-CRAN-utf8 x86_64 1.2.4-1.fc38.copr6555966 copr_base 151 k R-CRAN-vctrs x86_64 0.6.4-1.fc38.copr6524681 copr_base 1.3 M R-CRAN-waldo noarch 0.5.2-1.fc38.copr6596563 copr_base 115 k R-CRAN-withr noarch 2.5.2-1.fc38.copr6583488 copr_base 257 k R-core x86_64 4.3.2-1.fc38 updates 64 M R-core-devel x86_64 4.3.2-1.fc38 updates 93 k R-java x86_64 4.3.2-1.fc38 updates 11 k R-java-devel x86_64 4.3.2-1.fc38 updates 10 k R-littler x86_64 0.3.18-4.fc38 updates 76 k R-rpm-macros noarch 1.2.1-6.fc38 fedora 11 k alsa-lib x86_64 1.2.10-2.fc38 updates 521 k annobin-docs noarch 12.27-1.fc38 updates 92 k annobin-plugin-gcc x86_64 12.27-1.fc38 updates 957 k avahi-libs x86_64 0.8-22.fc38 updates 66 k brotli x86_64 1.0.9-11.fc38 fedora 316 k brotli-devel x86_64 1.0.9-11.fc38 fedora 31 k bzip2-devel x86_64 1.0.8-13.fc38 fedora 214 k cairo x86_64 1.17.8-4.fc38 updates 704 k cmake-filesystem x86_64 3.27.7-1.fc38 updates 19 k copy-jdk-configs noarch 4.1-2.fc38 fedora 28 k cpp x86_64 13.2.1-4.fc38 updates 11 M crypto-policies-scripts noarch 20230301-1.gita12f7b2.fc38 fedora 116 k cups-libs x86_64 1:2.4.7-2.fc38 updates 271 k dbus-libs x86_64 1:1.14.10-1.fc38 updates 156 k desktop-file-utils x86_64 0.26-8.fc38 fedora 71 k emacs-filesystem noarch 1:28.3-0.rc1.fc38 updates 8.1 k expat x86_64 2.5.0-2.fc38 fedora 110 k flexiblas x86_64 3.3.1-5.fc38 updates 33 k flexiblas-devel x86_64 3.3.1-5.fc38 updates 117 k flexiblas-netlib x86_64 3.3.1-5.fc38 updates 3.1 M flexiblas-netlib64 x86_64 3.3.1-5.fc38 updates 3.0 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc38 updates 17 k flexiblas-openblas-openmp64 x86_64 3.3.1-5.fc38 updates 17 k fontconfig x86_64 2.14.2-1.fc38 fedora 295 k fontconfig-devel x86_64 2.14.2-1.fc38 fedora 164 k fonts-filesystem noarch 1:2.0.5-11.fc38 fedora 8.1 k freetype x86_64 2.13.0-2.fc38 fedora 414 k freetype-devel x86_64 2.13.0-2.fc38 fedora 945 k fribidi x86_64 1.0.12-3.fc38 fedora 89 k gc x86_64 8.2.2-3.fc38 fedora 110 k gcc x86_64 13.2.1-4.fc38 updates 34 M gcc-c++ x86_64 13.2.1-4.fc38 updates 13 M gcc-gfortran x86_64 13.2.1-4.fc38 updates 12 M gcc-plugin-annobin x86_64 13.2.1-4.fc38 updates 48 k gettext x86_64 0.21.1-2.fc38 fedora 1.0 M gettext-envsubst x86_64 0.21.1-2.fc38 fedora 36 k gettext-libs x86_64 0.21.1-2.fc38 fedora 320 k gettext-runtime x86_64 0.21.1-2.fc38 fedora 117 k glib2 x86_64 2.76.5-2.fc38 updates 2.8 M glib2-devel x86_64 2.76.5-2.fc38 updates 586 k glibc-devel x86_64 2.37-13.fc38 updates 53 k glibc-headers-x86 noarch 2.37-13.fc38 updates 534 k gnutls x86_64 3.8.1-1.fc38 updates 1.1 M google-noto-fonts-common noarch 20230201-2.fc38 updates 16 k google-noto-sans-vf-fonts noarch 20230201-2.fc38 updates 579 k graphite2 x86_64 1.3.14-11.fc38 fedora 95 k graphite2-devel x86_64 1.3.14-11.fc38 fedora 20 k guile22 x86_64 2.2.7-7.fc38 fedora 6.5 M harfbuzz x86_64 7.1.0-1.fc38 fedora 889 k harfbuzz-devel x86_64 7.1.0-1.fc38 fedora 445 k harfbuzz-icu x86_64 7.1.0-1.fc38 fedora 16 k java-17-openjdk x86_64 1:17.0.8.0.7-1.fc38 updates 441 k java-17-openjdk-devel x86_64 1:17.0.8.0.7-1.fc38 updates 4.7 M java-17-openjdk-headless x86_64 1:17.0.8.0.7-1.fc38 updates 45 M javapackages-filesystem noarch 6.1.0-7.fc38 fedora 13 k jbigkit-libs x86_64 2.1-25.fc38 fedora 53 k kernel-headers x86_64 6.5.4-200.fc38 updates 1.5 M langpacks-core-font-en noarch 3.0-32.fc38 updates 9.6 k libICE x86_64 1.0.10-10.fc38 fedora 71 k libRmath x86_64 4.3.2-1.fc38 updates 122 k libRmath-devel x86_64 4.3.2-1.fc38 updates 16 k libSM x86_64 1.2.3-12.fc38 fedora 41 k libX11 x86_64 1.8.7-1.fc38 updates 650 k libX11-common noarch 1.8.7-1.fc38 updates 176 k libX11-devel x86_64 1.8.7-1.fc38 updates 1.0 M libX11-xcb x86_64 1.8.7-1.fc38 updates 12 k libXau x86_64 1.0.11-2.fc38 fedora 32 k libXau-devel x86_64 1.0.11-2.fc38 fedora 14 k libXcomposite x86_64 0.4.5-9.fc38 fedora 23 k libXext x86_64 1.3.5-2.fc38 fedora 39 k libXft x86_64 2.3.8-2.fc38 updates 72 k libXft-devel x86_64 2.3.8-2.fc38 updates 50 k libXi x86_64 1.8.1-1.fc38 updates 40 k libXmu x86_64 1.1.4-2.fc38 fedora 77 k libXrender x86_64 0.9.11-2.fc38 fedora 27 k libXrender-devel x86_64 0.9.11-2.fc38 fedora 19 k libXt x86_64 1.2.1-4.fc38 fedora 179 k libXtst x86_64 1.2.4-2.fc38 fedora 20 k libb2 x86_64 0.98.1-8.fc38 fedora 25 k libblkid-devel x86_64 2.38.1-4.fc38 fedora 16 k libdatrie x86_64 0.2.13-5.fc38 fedora 32 k libffi-devel x86_64 3.4.4-2.fc38 fedora 29 k libfontenc x86_64 1.1.6-2.fc38 fedora 32 k libgfortran x86_64 13.2.1-4.fc38 updates 905 k libicu x86_64 72.1-2.fc38 fedora 10 M libicu-devel x86_64 72.1-2.fc38 fedora 918 k libjpeg-turbo x86_64 2.1.4-2.fc38 fedora 183 k liblerc x86_64 4.0.0-3.fc38 fedora 202 k libmount-devel x86_64 2.38.1-4.fc38 fedora 18 k libmpc x86_64 1.3.1-2.fc38 fedora 70 k libpng x86_64 2:1.6.37-14.fc38 fedora 120 k libpng-devel x86_64 2:1.6.37-14.fc38 fedora 291 k libquadmath x86_64 13.2.1-4.fc38 updates 196 k libquadmath-devel x86_64 13.2.1-4.fc38 updates 38 k libselinux-devel x86_64 3.5-1.fc38 fedora 151 k libsepol-devel x86_64 3.5-1.fc38 fedora 49 k libstdc++-devel x86_64 13.2.1-4.fc38 updates 2.6 M libthai x86_64 0.1.29-4.fc38 fedora 213 k libtiff x86_64 4.4.0-8.fc38 updates 201 k libtirpc-devel x86_64 1.3.4-0.fc38 updates 125 k libtool-ltdl x86_64 2.4.7-6.fc38 fedora 37 k libunistring x86_64 1.1-3.fc38 fedora 545 k libwebp x86_64 1.3.2-2.fc38 updates 284 k libxcb x86_64 1.13.1-11.fc38 fedora 231 k libxcb-devel x86_64 1.13.1-11.fc38 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-1.fc38 updates 30 k libxml2-devel x86_64 2.10.4-1.fc38 updates 531 k lksctp-tools x86_64 1.0.19-3.fc38 fedora 92 k lua x86_64 5.4.4-9.fc38 fedora 190 k lua-posix x86_64 35.1-5.fc38 fedora 138 k make x86_64 1:4.4.1-1.fc38 updates 588 k mkfontscale x86_64 1.2.2-3.fc38 fedora 32 k mpdecimal x86_64 2.5.1-6.fc38 fedora 89 k nettle x86_64 3.8-3.fc38 fedora 412 k nspr x86_64 4.35.0-12.fc38 updates 137 k nss x86_64 3.94.0-2.fc38 updates 697 k nss-softokn x86_64 3.94.0-2.fc38 updates 412 k nss-softokn-freebl x86_64 3.94.0-2.fc38 updates 349 k nss-sysinit x86_64 3.94.0-2.fc38 updates 18 k nss-util x86_64 3.94.0-2.fc38 updates 87 k openblas x86_64 0.3.21-4.fc38 fedora 35 k openblas-openmp x86_64 0.3.21-4.fc38 fedora 5.1 M openblas-openmp64 x86_64 0.3.21-4.fc38 fedora 4.9 M pango x86_64 1.50.14-1.fc38 fedora 342 k pcre2-devel x86_64 10.42-1.fc38.1 fedora 506 k pcre2-utf16 x86_64 10.42-1.fc38.1 fedora 214 k pcre2-utf32 x86_64 10.42-1.fc38.1 fedora 201 k pixman x86_64 0.42.2-1.fc38 fedora 285 k python-pip-wheel noarch 22.3.1-3.fc38 updates 1.4 M python-setuptools-wheel noarch 65.5.1-2.fc38 fedora 715 k python3 x86_64 3.11.6-1.fc38 updates 28 k python3-libs x86_64 3.11.6-1.fc38 updates 9.6 M sysprof-capture-devel x86_64 3.48.0-1.fc38 fedora 58 k tcl x86_64 1:8.6.12-4.fc38 fedora 1.1 M tcl-devel x86_64 1:8.6.12-4.fc38 fedora 169 k tk x86_64 1:8.6.12-4.fc38 fedora 1.6 M tk-devel x86_64 1:8.6.12-4.fc38 fedora 538 k tre x86_64 0.8.0-39.20140228gitc2f5d13.fc38 fedora 43 k tre-common noarch 0.8.0-39.20140228gitc2f5d13.fc38 fedora 31 k tre-devel x86_64 0.8.0-39.20140228gitc2f5d13.fc38 fedora 12 k ttmkfdir x86_64 3.0.9-67.fc38 fedora 54 k tzdata-java noarch 2023c-1.fc38 fedora 208 k xdg-utils noarch 1.1.3-15.fc38 updates 77 k xml-common noarch 0.6.3-60.fc38 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-35.fc38 fedora 505 k xorg-x11-proto-devel noarch 2022.2-3.fc38 fedora 299 k xz-devel x86_64 5.4.1-1.fc38 fedora 65 k zlib-devel x86_64 1.2.13-3.fc38 fedora 45 k Transaction Summary ======================================================================================== Install 192 Packages Total download size: 289 M Installed size: 915 M Downloading Packages: (1/192): R-CRAN-R6-2.5.1-1.fc38.copr5812135.noa 1.4 MB/s | 96 kB 00:00 (2/192): R-CRAN-Rcpp-1.0.11-1.fc38.copr6148288. 15 MB/s | 2.0 MB 00:00 (3/192): R-CRAN-RcppEigen-0.3.3.9.4-1.fc38.copr 17 MB/s | 1.2 MB 00:00 (4/192): R-CRAN-Matrix-1.6.3-1.fc38.copr6636945 28 MB/s | 4.1 MB 00:00 (5/192): R-CRAN-brio-1.1.3-1.fc38.copr5814660.x 4.7 MB/s | 47 kB 00:00 (6/192): R-CRAN-callr-3.7.3-1.fc38.copr5817800. 32 MB/s | 433 kB 00:00 (7/192): R-CRAN-crayon-1.5.2-1.fc38.copr5812139 11 MB/s | 182 kB 00:00 (8/192): R-CRAN-cli-3.6.1-1.fc38.copr5812158.x8 54 MB/s | 1.3 MB 00:00 (9/192): R-CRAN-desc-1.4.2-1.fc38.copr5815615.n 17 MB/s | 352 kB 00:00 (10/192): R-CRAN-diffobj-0.3.5-1.fc38.copr58156 48 MB/s | 1.0 MB 00:00 (11/192): R-CRAN-digest-0.6.33-1.fc38.copr61509 15 MB/s | 216 kB 00:00 (12/192): R-CRAN-ellipsis-0.3.2-1.fc38.copr5815 3.8 MB/s | 49 kB 00:00 (13/192): R-CRAN-evaluate-0.23-1.fc38.copr65897 9.9 MB/s | 98 kB 00:00 (14/192): R-CRAN-fs-1.6.3-1.fc38.copr6193673.x8 23 MB/s | 312 kB 00:00 (15/192): R-CRAN-fansi-1.0.5-1.fc38.copr6506680 22 MB/s | 340 kB 00:00 (16/192): R-CRAN-glue-1.6.2-1.fc38.copr5812116. 16 MB/s | 162 kB 00:00 (17/192): R-CRAN-jsonlite-1.8.7-1.fc38.copr6127 43 MB/s | 637 kB 00:00 (18/192): R-CRAN-lattice-0.22.5-1.fc38.copr6562 41 MB/s | 1.4 MB 00:00 (19/192): R-CRAN-lifecycle-1.0.4-1.fc38.copr661 3.8 MB/s | 131 kB 00:00 (20/192): R-CRAN-magrittr-2.0.3-1.fc38.copr5812 9.0 MB/s | 222 kB 00:00 (21/192): R-CRAN-pillar-1.9.0-1.fc38.copr581945 41 MB/s | 624 kB 00:00 (22/192): R-CRAN-pkgconfig-2.0.3-3.fc38.copr581 2.2 MB/s | 30 kB 00:00 (23/192): R-CRAN-pkgbuild-1.4.2-1.fc38.copr6116 14 MB/s | 203 kB 00:00 (24/192): R-CRAN-pkgload-1.3.3-1.fc38.copr64379 18 MB/s | 200 kB 00:00 (25/192): R-CRAN-praise-1.0.0-3.fc38.copr581224 2.5 MB/s | 28 kB 00:00 (26/192): R-CRAN-prettyunits-1.2.0-1.fc38.copr6 15 MB/s | 169 kB 00:00 (27/192): R-CRAN-processx-3.8.2-1.fc38.copr6131 29 MB/s | 356 kB 00:00 (28/192): R-CRAN-ps-1.7.5-1.fc38.copr5812153.x8 22 MB/s | 338 kB 00:00 (29/192): R-CRAN-rematch2-2.1.2-3.fc38.copr5826 4.1 MB/s | 59 kB 00:00 (30/192): R-CRAN-rlang-1.1.2-1.fc38.copr6598950 45 MB/s | 1.6 MB 00:00 (31/192): R-CRAN-rprojroot-2.0.4-1.fc38.copr660 3.4 MB/s | 121 kB 00:00 (32/192): R-CRAN-testthat-3.2.0-1.fc38.copr6501 40 MB/s | 1.7 MB 00:00 (33/192): R-CRAN-utf8-1.2.4-1.fc38.copr6555966. 11 MB/s | 151 kB 00:00 (34/192): R-CRAN-tibble-3.2.1-1.fc38.copr582116 37 MB/s | 632 kB 00:00 (35/192): R-CRAN-vctrs-0.6.4-1.fc38.copr6524681 56 MB/s | 1.3 MB 00:00 (36/192): R-CRAN-waldo-0.5.2-1.fc38.copr6596563 7.1 MB/s | 115 kB 00:00 (37/192): R-CRAN-withr-2.5.2-1.fc38.copr6583488 16 MB/s | 257 kB 00:00 (38/192): R-rpm-macros-1.2.1-6.fc38.noarch.rpm 122 kB/s | 11 kB 00:00 (39/192): brotli-devel-1.0.9-11.fc38.x86_64.rpm 272 kB/s | 31 kB 00:00 (40/192): copy-jdk-configs-4.1-2.fc38.noarch.rp 611 kB/s | 28 kB 00:00 (41/192): brotli-1.0.9-11.fc38.x86_64.rpm 1.6 MB/s | 316 kB 00:00 (42/192): bzip2-devel-1.0.8-13.fc38.x86_64.rpm 1.9 MB/s | 214 kB 00:00 (43/192): crypto-policies-scripts-20230301-1.gi 1.5 MB/s | 116 kB 00:00 (44/192): desktop-file-utils-0.26-8.fc38.x86_64 1.4 MB/s | 71 kB 00:00 (45/192): expat-2.5.0-2.fc38.x86_64.rpm 2.1 MB/s | 110 kB 00:00 (46/192): fontconfig-devel-2.14.2-1.fc38.x86_64 2.7 MB/s | 164 kB 00:00 (47/192): fontconfig-2.14.2-1.fc38.x86_64.rpm 3.8 MB/s | 295 kB 00:00 (48/192): fonts-filesystem-2.0.5-11.fc38.noarch 127 kB/s | 8.1 kB 00:00 (49/192): fribidi-1.0.12-3.fc38.x86_64.rpm 1.9 MB/s | 89 kB 00:00 (50/192): freetype-2.13.0-2.fc38.x86_64.rpm 5.6 MB/s | 414 kB 00:00 (51/192): freetype-devel-2.13.0-2.fc38.x86_64.r 9.6 MB/s | 945 kB 00:00 (52/192): gc-8.2.2-3.fc38.x86_64.rpm 2.3 MB/s | 110 kB 00:00 (53/192): gettext-envsubst-0.21.1-2.fc38.x86_64 975 kB/s | 36 kB 00:00 (54/192): gettext-0.21.1-2.fc38.x86_64.rpm 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: copy-jdk-configs-4.1-2.fc38.noarch 1/1 Running scriptlet: java-17-openjdk-headless-1:17.0.8.0.7-1.fc38.x86_64 1/1 Preparing : 1/1 Installing : zlib-devel-1.2.13-3.fc38.x86_64 1/192 Installing : nspr-4.35.0-12.fc38.x86_64 2/192 Installing : libgfortran-13.2.1-4.fc38.x86_64 3/192 Installing : nss-util-3.94.0-2.fc38.x86_64 4/192 Installing : libquadmath-13.2.1-4.fc38.x86_64 5/192 Installing : xorg-x11-proto-devel-2022.2-3.fc38.noarch 6/192 Installing : libpng-2:1.6.37-14.fc38.x86_64 7/192 Installing : libmpc-1.3.1-2.fc38.x86_64 8/192 Installing : tcl-1:8.6.12-4.fc38.x86_64 9/192 Installing : libunistring-1.1-3.fc38.x86_64 10/192 Installing : libicu-72.1-2.fc38.x86_64 11/192 Installing : libicu-devel-72.1-2.fc38.x86_64 12/192 Installing : gettext-libs-0.21.1-2.fc38.x86_64 13/192 Installing : tcl-devel-1:8.6.12-4.fc38.x86_64 14/192 Installing : libRmath-4.3.2-1.fc38.x86_64 15/192 Installing : xz-devel-5.4.1-1.fc38.x86_64 16/192 Installing : 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libffi-devel-3.4.4-2.fc38.x86_64 79/192 Verifying : libfontenc-1.1.6-2.fc38.x86_64 80/192 Verifying : libicu-72.1-2.fc38.x86_64 81/192 Verifying : libicu-devel-72.1-2.fc38.x86_64 82/192 Verifying : libjpeg-turbo-2.1.4-2.fc38.x86_64 83/192 Verifying : liblerc-4.0.0-3.fc38.x86_64 84/192 Verifying : libmount-devel-2.38.1-4.fc38.x86_64 85/192 Verifying : libmpc-1.3.1-2.fc38.x86_64 86/192 Verifying : libpng-2:1.6.37-14.fc38.x86_64 87/192 Verifying : libpng-devel-2:1.6.37-14.fc38.x86_64 88/192 Verifying : libselinux-devel-3.5-1.fc38.x86_64 89/192 Verifying : libsepol-devel-3.5-1.fc38.x86_64 90/192 Verifying : libthai-0.1.29-4.fc38.x86_64 91/192 Verifying : libtool-ltdl-2.4.7-6.fc38.x86_64 92/192 Verifying : libunistring-1.1-3.fc38.x86_64 93/192 Verifying : libxcb-1.13.1-11.fc38.x86_64 94/192 Verifying : libxcb-devel-1.13.1-11.fc38.x86_64 95/192 Verifying : lksctp-tools-1.0.19-3.fc38.x86_64 96/192 Verifying : lua-5.4.4-9.fc38.x86_64 97/192 Verifying : lua-posix-35.1-5.fc38.x86_64 98/192 Verifying : mkfontscale-1.2.2-3.fc38.x86_64 99/192 Verifying : mpdecimal-2.5.1-6.fc38.x86_64 100/192 Verifying : nettle-3.8-3.fc38.x86_64 101/192 Verifying : openblas-0.3.21-4.fc38.x86_64 102/192 Verifying : openblas-openmp-0.3.21-4.fc38.x86_64 103/192 Verifying : openblas-openmp64-0.3.21-4.fc38.x86_64 104/192 Verifying : pango-1.50.14-1.fc38.x86_64 105/192 Verifying : pcre2-devel-10.42-1.fc38.1.x86_64 106/192 Verifying : pcre2-utf16-10.42-1.fc38.1.x86_64 107/192 Verifying : pcre2-utf32-10.42-1.fc38.1.x86_64 108/192 Verifying : pixman-0.42.2-1.fc38.x86_64 109/192 Verifying : python-setuptools-wheel-65.5.1-2.fc38.noarch 110/192 Verifying : sysprof-capture-devel-3.48.0-1.fc38.x86_64 111/192 Verifying : tcl-1:8.6.12-4.fc38.x86_64 112/192 Verifying : tcl-devel-1:8.6.12-4.fc38.x86_64 113/192 Verifying : tk-1:8.6.12-4.fc38.x86_64 114/192 Verifying : tk-devel-1:8.6.12-4.fc38.x86_64 115/192 Verifying : tre-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 116/192 Verifying : tre-common-0.8.0-39.20140228gitc2f5d13.fc38.noar 117/192 Verifying : tre-devel-0.8.0-39.20140228gitc2f5d13.fc38.x86_6 118/192 Verifying : ttmkfdir-3.0.9-67.fc38.x86_64 119/192 Verifying : tzdata-java-2023c-1.fc38.noarch 120/192 Verifying : xml-common-0.6.3-60.fc38.noarch 121/192 Verifying : xorg-x11-fonts-Type1-7.5-35.fc38.noarch 122/192 Verifying : xorg-x11-proto-devel-2022.2-3.fc38.noarch 123/192 Verifying : xz-devel-5.4.1-1.fc38.x86_64 124/192 Verifying : zlib-devel-1.2.13-3.fc38.x86_64 125/192 Verifying : R-core-4.3.2-1.fc38.x86_64 126/192 Verifying : R-core-devel-4.3.2-1.fc38.x86_64 127/192 Verifying : R-devel-4.3.2-1.fc38.x86_64 128/192 Verifying : R-java-4.3.2-1.fc38.x86_64 129/192 Verifying : R-java-devel-4.3.2-1.fc38.x86_64 130/192 Verifying : R-littler-0.3.18-4.fc38.x86_64 131/192 Verifying : alsa-lib-1.2.10-2.fc38.x86_64 132/192 Verifying : annobin-docs-12.27-1.fc38.noarch 133/192 Verifying : annobin-plugin-gcc-12.27-1.fc38.x86_64 134/192 Verifying : avahi-libs-0.8-22.fc38.x86_64 135/192 Verifying : cairo-1.17.8-4.fc38.x86_64 136/192 Verifying : cmake-filesystem-3.27.7-1.fc38.x86_64 137/192 Verifying : cpp-13.2.1-4.fc38.x86_64 138/192 Verifying : cups-libs-1:2.4.7-2.fc38.x86_64 139/192 Verifying : dbus-libs-1:1.14.10-1.fc38.x86_64 140/192 Verifying : emacs-filesystem-1:28.3-0.rc1.fc38.noarch 141/192 Verifying : flexiblas-3.3.1-5.fc38.x86_64 142/192 Verifying : flexiblas-devel-3.3.1-5.fc38.x86_64 143/192 Verifying : flexiblas-netlib-3.3.1-5.fc38.x86_64 144/192 Verifying : flexiblas-netlib64-3.3.1-5.fc38.x86_64 145/192 Verifying : flexiblas-openblas-openmp-3.3.1-5.fc38.x86_64 146/192 Verifying : flexiblas-openblas-openmp64-3.3.1-5.fc38.x86_64 147/192 Verifying : gcc-13.2.1-4.fc38.x86_64 148/192 Verifying : gcc-c++-13.2.1-4.fc38.x86_64 149/192 Verifying : gcc-gfortran-13.2.1-4.fc38.x86_64 150/192 Verifying : gcc-plugin-annobin-13.2.1-4.fc38.x86_64 151/192 Verifying : glib2-2.76.5-2.fc38.x86_64 152/192 Verifying : glib2-devel-2.76.5-2.fc38.x86_64 153/192 Verifying : glibc-devel-2.37-13.fc38.x86_64 154/192 Verifying : glibc-headers-x86-2.37-13.fc38.noarch 155/192 Verifying : gnutls-3.8.1-1.fc38.x86_64 156/192 Verifying : google-noto-fonts-common-20230201-2.fc38.noarch 157/192 Verifying : google-noto-sans-vf-fonts-20230201-2.fc38.noarch 158/192 Verifying : java-17-openjdk-1:17.0.8.0.7-1.fc38.x86_64 159/192 Verifying : java-17-openjdk-devel-1:17.0.8.0.7-1.fc38.x86_64 160/192 Verifying : java-17-openjdk-headless-1:17.0.8.0.7-1.fc38.x86 161/192 Verifying : kernel-headers-6.5.4-200.fc38.x86_64 162/192 Verifying : langpacks-core-font-en-3.0-32.fc38.noarch 163/192 Verifying : libRmath-4.3.2-1.fc38.x86_64 164/192 Verifying : libRmath-devel-4.3.2-1.fc38.x86_64 165/192 Verifying : libX11-1.8.7-1.fc38.x86_64 166/192 Verifying : libX11-common-1.8.7-1.fc38.noarch 167/192 Verifying : libX11-devel-1.8.7-1.fc38.x86_64 168/192 Verifying : libX11-xcb-1.8.7-1.fc38.x86_64 169/192 Verifying : libXft-2.3.8-2.fc38.x86_64 170/192 Verifying : libXft-devel-2.3.8-2.fc38.x86_64 171/192 Verifying : libXi-1.8.1-1.fc38.x86_64 172/192 Verifying : libgfortran-13.2.1-4.fc38.x86_64 173/192 Verifying : libquadmath-13.2.1-4.fc38.x86_64 174/192 Verifying : libquadmath-devel-13.2.1-4.fc38.x86_64 175/192 Verifying : libstdc++-devel-13.2.1-4.fc38.x86_64 176/192 Verifying : libtiff-4.4.0-8.fc38.x86_64 177/192 Verifying : libtirpc-devel-1.3.4-0.fc38.x86_64 178/192 Verifying : libwebp-1.3.2-2.fc38.x86_64 179/192 Verifying : libxcrypt-devel-4.4.36-1.fc38.x86_64 180/192 Verifying : libxml2-devel-2.10.4-1.fc38.x86_64 181/192 Verifying : make-1:4.4.1-1.fc38.x86_64 182/192 Verifying : nspr-4.35.0-12.fc38.x86_64 183/192 Verifying : nss-3.94.0-2.fc38.x86_64 184/192 Verifying : nss-softokn-3.94.0-2.fc38.x86_64 185/192 Verifying : nss-softokn-freebl-3.94.0-2.fc38.x86_64 186/192 Verifying : nss-sysinit-3.94.0-2.fc38.x86_64 187/192 Verifying : nss-util-3.94.0-2.fc38.x86_64 188/192 Verifying : python-pip-wheel-22.3.1-3.fc38.noarch 189/192 Verifying : python3-3.11.6-1.fc38.x86_64 190/192 Verifying : python3-libs-3.11.6-1.fc38.x86_64 191/192 Verifying : xdg-utils-1.1.3-15.fc38.noarch 192/192 Installed products updated. Installed: R-CRAN-Matrix-1.6.3-1.fc38.copr6636945.x86_64 R-CRAN-R6-2.5.1-1.fc38.copr5812135.noarch R-CRAN-Rcpp-1.0.11-1.fc38.copr6148288.x86_64 R-CRAN-RcppEigen-0.3.3.9.4-1.fc38.copr6596539.x86_64 R-CRAN-brio-1.1.3-1.fc38.copr5814660.x86_64 R-CRAN-callr-3.7.3-1.fc38.copr5817800.noarch R-CRAN-cli-3.6.1-1.fc38.copr5812158.x86_64 R-CRAN-crayon-1.5.2-1.fc38.copr5812139.noarch R-CRAN-desc-1.4.2-1.fc38.copr5815615.noarch R-CRAN-diffobj-0.3.5-1.fc38.copr5815679.x86_64 R-CRAN-digest-0.6.33-1.fc38.copr6150922.x86_64 R-CRAN-ellipsis-0.3.2-1.fc38.copr5815610.x86_64 R-CRAN-evaluate-0.23-1.fc38.copr6589765.noarch R-CRAN-fansi-1.0.5-1.fc38.copr6506680.x86_64 R-CRAN-fs-1.6.3-1.fc38.copr6193673.x86_64 R-CRAN-glue-1.6.2-1.fc38.copr5812116.x86_64 R-CRAN-jsonlite-1.8.7-1.fc38.copr6127729.x86_64 R-CRAN-lattice-0.22.5-1.fc38.copr6562879.x86_64 R-CRAN-lifecycle-1.0.4-1.fc38.copr6614518.noarch R-CRAN-magrittr-2.0.3-1.fc38.copr5812133.x86_64 R-CRAN-pillar-1.9.0-1.fc38.copr5819458.noarch R-CRAN-pkgbuild-1.4.2-1.fc38.copr6116915.noarch R-CRAN-pkgconfig-2.0.3-3.fc38.copr5812134.noarch R-CRAN-pkgload-1.3.3-1.fc38.copr6437975.noarch R-CRAN-praise-1.0.0-3.fc38.copr5812240.noarch R-CRAN-prettyunits-1.2.0-1.fc38.copr6439833.noarch R-CRAN-processx-3.8.2-1.fc38.copr6131588.x86_64 R-CRAN-ps-1.7.5-1.fc38.copr5812153.x86_64 R-CRAN-rematch2-2.1.2-3.fc38.copr5826107.noarch R-CRAN-rlang-1.1.2-1.fc38.copr6598950.x86_64 R-CRAN-rprojroot-2.0.4-1.fc38.copr6601156.noarch R-CRAN-testthat-3.2.0-1.fc38.copr6501172.x86_64 R-CRAN-tibble-3.2.1-1.fc38.copr5821162.x86_64 R-CRAN-utf8-1.2.4-1.fc38.copr6555966.x86_64 R-CRAN-vctrs-0.6.4-1.fc38.copr6524681.x86_64 R-CRAN-waldo-0.5.2-1.fc38.copr6596563.noarch R-CRAN-withr-2.5.2-1.fc38.copr6583488.noarch R-core-4.3.2-1.fc38.x86_64 R-core-devel-4.3.2-1.fc38.x86_64 R-devel-4.3.2-1.fc38.x86_64 R-java-4.3.2-1.fc38.x86_64 R-java-devel-4.3.2-1.fc38.x86_64 R-littler-0.3.18-4.fc38.x86_64 R-rpm-macros-1.2.1-6.fc38.noarch alsa-lib-1.2.10-2.fc38.x86_64 annobin-docs-12.27-1.fc38.noarch annobin-plugin-gcc-12.27-1.fc38.x86_64 avahi-libs-0.8-22.fc38.x86_64 brotli-1.0.9-11.fc38.x86_64 brotli-devel-1.0.9-11.fc38.x86_64 bzip2-devel-1.0.8-13.fc38.x86_64 cairo-1.17.8-4.fc38.x86_64 cmake-filesystem-3.27.7-1.fc38.x86_64 copy-jdk-configs-4.1-2.fc38.noarch cpp-13.2.1-4.fc38.x86_64 crypto-policies-scripts-20230301-1.gita12f7b2.fc38.noarch cups-libs-1:2.4.7-2.fc38.x86_64 dbus-libs-1:1.14.10-1.fc38.x86_64 desktop-file-utils-0.26-8.fc38.x86_64 emacs-filesystem-1:28.3-0.rc1.fc38.noarch expat-2.5.0-2.fc38.x86_64 flexiblas-3.3.1-5.fc38.x86_64 flexiblas-devel-3.3.1-5.fc38.x86_64 flexiblas-netlib-3.3.1-5.fc38.x86_64 flexiblas-netlib64-3.3.1-5.fc38.x86_64 flexiblas-openblas-openmp-3.3.1-5.fc38.x86_64 flexiblas-openblas-openmp64-3.3.1-5.fc38.x86_64 fontconfig-2.14.2-1.fc38.x86_64 fontconfig-devel-2.14.2-1.fc38.x86_64 fonts-filesystem-1:2.0.5-11.fc38.noarch freetype-2.13.0-2.fc38.x86_64 freetype-devel-2.13.0-2.fc38.x86_64 fribidi-1.0.12-3.fc38.x86_64 gc-8.2.2-3.fc38.x86_64 gcc-13.2.1-4.fc38.x86_64 gcc-c++-13.2.1-4.fc38.x86_64 gcc-gfortran-13.2.1-4.fc38.x86_64 gcc-plugin-annobin-13.2.1-4.fc38.x86_64 gettext-0.21.1-2.fc38.x86_64 gettext-envsubst-0.21.1-2.fc38.x86_64 gettext-libs-0.21.1-2.fc38.x86_64 gettext-runtime-0.21.1-2.fc38.x86_64 glib2-2.76.5-2.fc38.x86_64 glib2-devel-2.76.5-2.fc38.x86_64 glibc-devel-2.37-13.fc38.x86_64 glibc-headers-x86-2.37-13.fc38.noarch gnutls-3.8.1-1.fc38.x86_64 google-noto-fonts-common-20230201-2.fc38.noarch google-noto-sans-vf-fonts-20230201-2.fc38.noarch graphite2-1.3.14-11.fc38.x86_64 graphite2-devel-1.3.14-11.fc38.x86_64 guile22-2.2.7-7.fc38.x86_64 harfbuzz-7.1.0-1.fc38.x86_64 harfbuzz-devel-7.1.0-1.fc38.x86_64 harfbuzz-icu-7.1.0-1.fc38.x86_64 java-17-openjdk-1:17.0.8.0.7-1.fc38.x86_64 java-17-openjdk-devel-1:17.0.8.0.7-1.fc38.x86_64 java-17-openjdk-headless-1:17.0.8.0.7-1.fc38.x86_64 javapackages-filesystem-6.1.0-7.fc38.noarch jbigkit-libs-2.1-25.fc38.x86_64 kernel-headers-6.5.4-200.fc38.x86_64 langpacks-core-font-en-3.0-32.fc38.noarch libICE-1.0.10-10.fc38.x86_64 libRmath-4.3.2-1.fc38.x86_64 libRmath-devel-4.3.2-1.fc38.x86_64 libSM-1.2.3-12.fc38.x86_64 libX11-1.8.7-1.fc38.x86_64 libX11-common-1.8.7-1.fc38.noarch libX11-devel-1.8.7-1.fc38.x86_64 libX11-xcb-1.8.7-1.fc38.x86_64 libXau-1.0.11-2.fc38.x86_64 libXau-devel-1.0.11-2.fc38.x86_64 libXcomposite-0.4.5-9.fc38.x86_64 libXext-1.3.5-2.fc38.x86_64 libXft-2.3.8-2.fc38.x86_64 libXft-devel-2.3.8-2.fc38.x86_64 libXi-1.8.1-1.fc38.x86_64 libXmu-1.1.4-2.fc38.x86_64 libXrender-0.9.11-2.fc38.x86_64 libXrender-devel-0.9.11-2.fc38.x86_64 libXt-1.2.1-4.fc38.x86_64 libXtst-1.2.4-2.fc38.x86_64 libb2-0.98.1-8.fc38.x86_64 libblkid-devel-2.38.1-4.fc38.x86_64 libdatrie-0.2.13-5.fc38.x86_64 libffi-devel-3.4.4-2.fc38.x86_64 libfontenc-1.1.6-2.fc38.x86_64 libgfortran-13.2.1-4.fc38.x86_64 libicu-72.1-2.fc38.x86_64 libicu-devel-72.1-2.fc38.x86_64 libjpeg-turbo-2.1.4-2.fc38.x86_64 liblerc-4.0.0-3.fc38.x86_64 libmount-devel-2.38.1-4.fc38.x86_64 libmpc-1.3.1-2.fc38.x86_64 libpng-2:1.6.37-14.fc38.x86_64 libpng-devel-2:1.6.37-14.fc38.x86_64 libquadmath-13.2.1-4.fc38.x86_64 libquadmath-devel-13.2.1-4.fc38.x86_64 libselinux-devel-3.5-1.fc38.x86_64 libsepol-devel-3.5-1.fc38.x86_64 libstdc++-devel-13.2.1-4.fc38.x86_64 libthai-0.1.29-4.fc38.x86_64 libtiff-4.4.0-8.fc38.x86_64 libtirpc-devel-1.3.4-0.fc38.x86_64 libtool-ltdl-2.4.7-6.fc38.x86_64 libunistring-1.1-3.fc38.x86_64 libwebp-1.3.2-2.fc38.x86_64 libxcb-1.13.1-11.fc38.x86_64 libxcb-devel-1.13.1-11.fc38.x86_64 libxcrypt-devel-4.4.36-1.fc38.x86_64 libxml2-devel-2.10.4-1.fc38.x86_64 lksctp-tools-1.0.19-3.fc38.x86_64 lua-5.4.4-9.fc38.x86_64 lua-posix-35.1-5.fc38.x86_64 make-1:4.4.1-1.fc38.x86_64 mkfontscale-1.2.2-3.fc38.x86_64 mpdecimal-2.5.1-6.fc38.x86_64 nettle-3.8-3.fc38.x86_64 nspr-4.35.0-12.fc38.x86_64 nss-3.94.0-2.fc38.x86_64 nss-softokn-3.94.0-2.fc38.x86_64 nss-softokn-freebl-3.94.0-2.fc38.x86_64 nss-sysinit-3.94.0-2.fc38.x86_64 nss-util-3.94.0-2.fc38.x86_64 openblas-0.3.21-4.fc38.x86_64 openblas-openmp-0.3.21-4.fc38.x86_64 openblas-openmp64-0.3.21-4.fc38.x86_64 pango-1.50.14-1.fc38.x86_64 pcre2-devel-10.42-1.fc38.1.x86_64 pcre2-utf16-10.42-1.fc38.1.x86_64 pcre2-utf32-10.42-1.fc38.1.x86_64 pixman-0.42.2-1.fc38.x86_64 python-pip-wheel-22.3.1-3.fc38.noarch python-setuptools-wheel-65.5.1-2.fc38.noarch python3-3.11.6-1.fc38.x86_64 python3-libs-3.11.6-1.fc38.x86_64 sysprof-capture-devel-3.48.0-1.fc38.x86_64 tcl-1:8.6.12-4.fc38.x86_64 tcl-devel-1:8.6.12-4.fc38.x86_64 tk-1:8.6.12-4.fc38.x86_64 tk-devel-1:8.6.12-4.fc38.x86_64 tre-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 tre-common-0.8.0-39.20140228gitc2f5d13.fc38.noarch tre-devel-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 ttmkfdir-3.0.9-67.fc38.x86_64 tzdata-java-2023c-1.fc38.noarch xdg-utils-1.1.3-15.fc38.noarch xml-common-0.6.3-60.fc38.noarch xorg-x11-fonts-Type1-7.5-35.fc38.noarch xorg-x11-proto-devel-2022.2-3.fc38.noarch xz-devel-5.4.1-1.fc38.x86_64 zlib-devel-1.2.13-3.fc38.x86_64 Complete! Finish: build setup for R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm Start: rpmbuild R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nf6mvA + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf psqn + /usr/bin/mkdir -p psqn + cd psqn + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/psqn_0.3.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d psqn/src ']' + find psqn/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d psqn/src ']' + find psqn/src/Makevars -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.htRs0C + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd psqn + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.C8xNCz + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd psqn + mkdir -p /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64/usr/local/lib/R/library psqn * installing *source* package 'psqn' ... ** package 'psqn' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)' using C++11 g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:397, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:377: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:370: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:439: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:110:39: required from 'SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from 'SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' RcppExports.cpp:57:33: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:80:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:110:39: required from 'SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from 'SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' RcppExports.cpp:57:33: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c r-api.cpp -o r-api.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:397, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from ../inst/include/psqn-Rcpp-wrapper.h:9, from r-api.cpp:6: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:377: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:370: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:439: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::OuterStride<> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from 'class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from 'struct Eigen::internal::is_ref_compatible_impl >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from 'struct Eigen::internal::is_ref_compatible >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from 'class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from 'class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >' ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from 'struct Eigen::internal::is_ref_compatible_impl >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from 'struct Eigen::internal::is_ref_compatible >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from 'class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from 'class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >' ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from 'struct Eigen::internal::is_ref_compatible_impl >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from 'struct Eigen::internal::is_ref_compatible >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from 'class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from 'class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >' ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:179:14: required from 'class Eigen::IncompleteCholesky' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:381:18: required from 'class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from 'class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >' ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:179:14: required from 'class Eigen::IncompleteCholesky' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:381:18: required from 'class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from 'class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >' ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 3, Eigen::IncompleteCholesky >, Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >' ../inst/include/psqn.h:492:21: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:218:17: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:219:17: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:241:30: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:241:42: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from 'class Eigen::RefBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:235:77: required from 'class Eigen::Ref, 0, Eigen::InnerStride<1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from 'class Eigen::Ref, 0, Eigen::InnerStride<1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from 'class Eigen::Ref, 0, Eigen::InnerStride<1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::InnerStride<1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:811:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:246:101: required by substitution of 'template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::ScalarTypeMatch), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:476: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:245:30: note: after user-defined conversion: 'Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::ScalarTypeMatch), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; TPlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::ScalarTypeMatch), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]' 245 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/IterativeLinearSolvers:44, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:33: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:92: note: initializing argument 1 of 'void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]' 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of 'template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:216:30: note: after user-defined conversion: 'Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; PlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]' 216 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:114: note: initializing argument 2 of 'void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]' 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of 'template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:216:30: note: after user-defined conversion: 'Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; PlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]' 216 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:136: note: initializing argument 3 of 'void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]' 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:329:16: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:330:18: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:352:42: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:445: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from 'struct Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of 'template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block, -1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:352:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from 'class Eigen::VectorBlock, -1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:353:42: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from 'struct Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of 'template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block, -1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:353:21: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' ../inst/include/psqn.h:1903:33: required from 'void PSQN::optimizer::fill_sparse_B_mat() [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]' ../inst/include/psqn.h:1979:5: required from 'Eigen::SparseMatrix PSQN::optimizer::true_hess_sparse(const double*, double, double, double, unsigned int) [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]' r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]' ../inst/include/psqn.h:438:32: required from 'void PSQN::base_optimizer::add_constraints_to_sparse_hess(Eigen::SparseMatrix&) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint]' ../inst/include/psqn.h:472:7: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Array >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Array > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, Eigen::Array > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Array >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]' ../inst/include/psqn.h:438:32: required from 'void PSQN::base_optimizer::add_constraints_to_sparse_hess(Eigen::SparseMatrix&) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint]' ../inst/include/psqn.h:472:7: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::InnerStride<1> >, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::InnerStride<1> >, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:385:19: required from 'void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:11: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' ../inst/include/psqn.h:1903:33: required from 'void PSQN::optimizer::fill_sparse_B_mat() [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]' ../inst/include/psqn.h:1979:5: required from 'Eigen::SparseMatrix PSQN::optimizer::true_hess_sparse(const double*, double, double, double, unsigned int) [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]' r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:317:3: required from 'void Eigen::DenseBase::fill(const Scalar&) [with Derived = Eigen::Matrix; Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:226:19: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:232:18: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 0, Eigen::InnerStride<1> >, -1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from 'class Eigen::internal::visitor_evaluator, 0, Eigen::InnerStride<1> >, -1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from 'void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor, 0, Eigen::InnerStride<1> >, -1, 1, false> >; Derived = Eigen::Block, 0, Eigen::InnerStride<1> >, -1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:229:14: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block, 0, Eigen::InnerStride<1> >, -1, 1, false>; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:385:34: required from 'void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:11: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from 'void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from 'Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:774:26: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:709:13: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]' r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:217:27: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:434:57: required from 'void Eigen::internal::permute_symm_to_fullsymm(const MatrixType&, Eigen::SparseMatrix&, const typename MatrixType::StorageIndex*) [with int Mode = 3; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int DestOrder = 1; typename MatrixType::Scalar = double; typename MatrixType::StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:641:45: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Sparse2Sparse>::run(Eigen::SparseMatrix&, const SrcXprType&, const Eigen::internal::assign_op&) [with int Options = 0; DstXprType = Eigen::SparseMatrix; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int Mode = 3; Scalar = double; typename DstXprType::StorageIndex = int; SrcXprType = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; typename MatrixType::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:783:29: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:208:9: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 0, Eigen::OuterStride<> >, 1024>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 0, Eigen::OuterStride<> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:223:23: required from 'void Eigen::ConjugateGradient<_MatrixType, _UpLo, _Preconditioner>::_solve_with_guess_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; _MatrixType = Eigen::SparseMatrix; int _UpLo = 3; _Preconditioner = Eigen::IncompleteCholesky]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:237:27: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:35: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:29: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:64:20: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:71:25: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:16: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:86:11: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:467:24: required from 'void Eigen::internal::permute_symm_to_fullsymm(const MatrixType&, Eigen::SparseMatrix&, const typename MatrixType::StorageIndex*) [with int Mode = 3; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int DestOrder = 1; typename MatrixType::Scalar = double; typename MatrixType::StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:641:45: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Sparse2Sparse>::run(Eigen::SparseMatrix&, const SrcXprType&, const Eigen::internal::assign_op&) [with int Options = 0; DstXprType = Eigen::SparseMatrix; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int Mode = 3; Scalar = double; typename DstXprType::StorageIndex = int; SrcXprType = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; typename MatrixType::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:783:29: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:208:9: required from 'void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from 'Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]' ../inst/include/psqn.h:480:19: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from 'struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: required from 'void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = add_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = Eigen::internal::add_assign_op; Weak = void]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from 'Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Derived = Eigen::Block, -1, 1, true>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix, const Eigen::Matrix > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:67:48: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:158:50: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix, 1>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Matrix, 1, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Matrix, 1, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Matrix, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:160:32: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 1> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl, 1, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from 'class Eigen::TriangularView, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:161:45: required from 'void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::IncompleteCholesky; RhsType = Eigen::Matrix; Scalar = double; SrcXprType = Eigen::Solve, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, Eigen::Matrix >; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1>, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1>, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 1>, Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:161:53: required from 'void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:22: required from 'void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >, 2> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl >, 2, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from 'class Eigen::TriangularView >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:55: required from 'void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::IncompleteCholesky; RhsType = Eigen::Matrix; Scalar = double; SrcXprType = Eigen::Solve, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, Eigen::Matrix >; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 2>, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 2>, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 2>, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl >, 2>, Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve >, 2>, Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:63: required from 'void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix, 2>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Matrix, 2, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Matrix, 2, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Matrix, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:165:30: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:174:81: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, 1, false, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, 1, false, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = swap_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from 'void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, 1, false>; Derived = Eigen::Block, 1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:992:18: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' ../inst/include/psqn.h:492:11: required from 'bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' ../inst/include/psqn.h:854:11: required from 'PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]' r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-intrapolate.cpp -o test-intrapolate.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-lp.cpp -o test-lp.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-richardson-extrapolation.cpp -o test-richardson-extrapolation.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-runner.cpp -o test-runner.o g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o psqn.so RcppExports.o r-api.o test-intrapolate.o test-lp.o test-richardson-extrapolation.o test-runner.o -lflexiblas -lflexiblas -lgfortran -lm -lquadmath -fopenmp -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64/usr/local/lib/R/library/00LOCK-psqn/00new/psqn/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'psqn' finding HTML links ... done psqn-package html psqn html psqn_bfgs html psqn_generic html psqn_hess html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (psqn) + test -d psqn/src + cd psqn/src + rm -f RcppExports.o r-api.o test-intrapolate.o test-lp.o test-richardson-extrapolation.o test-runner.o psqn.so + rm -f /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.3.1-1.fc38.copr6665194 --unique-debug-suffix -0.3.1-1.fc38.copr6665194.x86_64 --unique-debug-src-base R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/psqn find-debuginfo: starting Extracting debug info from 1 files /usr/bin/gdb.minimal DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 383 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 Provides: R-CRAN-psqn = 0.3.1-1.fc38.copr6665194 R-CRAN-psqn(x86-64) = 0.3.1-1.fc38.copr6665194 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-psqn-debugsource-0.3.1-1.fc38.copr6665194.x86_64 Provides: R-CRAN-psqn-debugsource = 0.3.1-1.fc38.copr6665194 R-CRAN-psqn-debugsource(x86-64) = 0.3.1-1.fc38.copr6665194 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-psqn-debuginfo-0.3.1-1.fc38.copr6665194.x86_64 Provides: R-CRAN-psqn-debuginfo = 0.3.1-1.fc38.copr6665194 R-CRAN-psqn-debuginfo(x86-64) = 0.3.1-1.fc38.copr6665194 debuginfo(build-id) = f4774ba4cf89e778fb6720e9ad447af1feb40612 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-psqn-debugsource(x86-64) = 0.3.1-1.fc38.copr6665194 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-psqn-debugsource-0.3.1-1.fc38.copr6665194.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-psqn-debuginfo-0.3.1-1.fc38.copr6665194.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.92ZDvl + umask 022 + cd /builddir/build/BUILD + cd psqn + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.J5LjgL + umask 022 + cd /builddir/build/BUILD + rm -rf psqn psqn.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm Finish: build phase for R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.rpm.log /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.librepo.log /var/lib/mock/fedora-38-x86_64-1700309121.690007/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-psqn-0.3.1-1.fc38.copr6665194.src.rpm) Config(child) 1 minutes 39 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-psqn-debugsource", "epoch": null, "version": "0.3.1", "release": "1.fc38.copr6665194", "arch": "x86_64" }, { "name": "R-CRAN-psqn-debuginfo", "epoch": null, "version": "0.3.1", "release": "1.fc38.copr6665194", "arch": "x86_64" }, { "name": "R-CRAN-psqn", "epoch": null, "version": "0.3.1", "release": "1.fc38.copr6665194", "arch": "x86_64" }, { "name": "R-CRAN-psqn", "epoch": null, "version": "0.3.1", "release": "1.fc38.copr6665194", "arch": "src" } ] } RPMResults finished