viewpathway {TPEA} | R Documentation |
Input the number of the interested pathway in KEGG Database and genes you interested in, such as differentially expressed genes.
viewpathway(pathwayID, DEGs)
pathwayID |
The number of interested pathway ID in KEGG Database, such as "hsa05210". |
DEGs |
The genes you interested in, such as differentially expressed genes. |
The "DEGs" must be Entrez ID. If not, please translate them into Entrez ID.
The interface link to KEGG Database to visualize the pathway you input.
Wei Jiang
DEGs<-c(836,842,5594,595);
DEG<-as.data.frame(DEGs);
pathwayID<-"hsa05210";
viewpathway(pathwayID,DEG);