%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  CancerEvolutionVisualization
%global packver   2.0.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          2.0.1
Release:          1%{?dist}%{?buildtag}
Summary:          Publication Quality Phylogenetic Tree Plots

License:          GPL-2
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 3.5.0
Requires:         R-core >= 3.5.0
BuildArch:        noarch
BuildRequires:    R-graphics 
BuildRequires:    R-grid 
BuildRequires:    R-CRAN-gridExtra 
BuildRequires:    R-CRAN-gtable 
BuildRequires:    R-CRAN-plyr 
BuildRequires:    R-grDevices 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-stringr 
BuildRequires:    R-CRAN-BoutrosLab.plotting.general 
Requires:         R-graphics 
Requires:         R-grid 
Requires:         R-CRAN-gridExtra 
Requires:         R-CRAN-gtable 
Requires:         R-CRAN-plyr 
Requires:         R-grDevices 
Requires:         R-utils 
Requires:         R-CRAN-stringr 
Requires:         R-CRAN-BoutrosLab.plotting.general 

%description
Generates tree plots with precise branch lengths, gene annotations, and
cellular prevalence. The package handles complex tree structures (angles,
lengths, etc.) and can be further refined as needed by the user.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}