Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c156' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7308084-fedora-38-x86_64 --chroot fedora-38-x86_64 Version: 0.72 PID: 10774 Logging PID: 10775 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'bootstrap': 'off', 'build_id': 7308084, 'buildroot_pkgs': [], 'chroot': 'fedora-38-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '3d54340d95d25f5890c8f8338d736e8116bc4166', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-galamm', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-CRAN-galamm', 'package_version': '0.2.0-1.copr7308084', 'project_dirname': 'cran', 'project_name': 'cran', 'project_owner': 'iucar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-38-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'iucar/cran--iucar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'iucar', 'tags': [], 'task_id': '7308084-fedora-38-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-galamm /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-galamm', '/var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm'... Running: git checkout 3d54340d95d25f5890c8f8338d736e8116bc4166 -- cmd: ['git', 'checkout', '3d54340d95d25f5890c8f8338d736e8116bc4166', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm rc: 0 stdout: stderr: Note: switching to '3d54340d95d25f5890c8f8338d736e8116bc4166'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 3d54340 automatic import of R-CRAN-galamm Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cwd: /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading galamm_0.2.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o galamm_0.2.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-galamm/galamm_0.2.0.tar.gz/md5/282273a8cb6226c12f694192507279a6/galamm_0.2.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3567k 100 3567k 0 0 1271k 0 0:00:02 0:00:02 --:--:-- 1271k INFO: Reading stdout from command: md5sum galamm_0.2.0.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm/R-CRAN-galamm.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1713089157.707426 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm/R-CRAN-galamm.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1713089157.707426 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm/R-CRAN-galamm.spec) Config(fedora-38-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-38-x86_64-1713089157.707426/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 42 kB/s | 1.5 kB 00:00 Copr repository 66 MB/s | 42 MB 00:00 fedora 70 kB/s | 24 kB 00:00 updates 159 kB/s | 21 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.26-1.fc38 updates 1.8 M bzip2 x86_64 1.0.8-13.fc38 fedora 52 k coreutils x86_64 9.1-12.fc38 updates 1.1 M cpio x86_64 2.13-14.fc38 fedora 276 k diffutils x86_64 3.10-1.fc38 updates 398 k fedora-release-common noarch 38-36 updates 22 k findutils x86_64 1:4.9.0-3.fc38 fedora 492 k gawk x86_64 5.1.1-5.fc38 fedora 1.0 M glibc-minimal-langpack x86_64 2.37-18.fc38 updates 41 k grep x86_64 3.8-3.fc38 fedora 293 k gzip x86_64 1.12-3.fc38 fedora 166 k info x86_64 7.0.2-2.fc38 fedora 181 k patch x86_64 2.7.6-19.fc38 fedora 126 k redhat-rpm-config noarch 257-1.fc38 updates 76 k rpm-build x86_64 4.18.2-1.fc38 updates 76 k sed x86_64 4.8-12.fc38 fedora 306 k shadow-utils x86_64 2:4.13-6.fc38 fedora 1.3 M tar x86_64 2:1.34-8.fc38 fedora 889 k unzip x86_64 6.0-60.fc38 fedora 184 k util-linux x86_64 2.38.1-4.fc38 fedora 2.3 M which x86_64 2.21-39.fc38 fedora 42 k xz x86_64 5.4.1-1.fc38 fedora 419 k Installing dependencies: alternatives x86_64 1.26-1.fc38 updates 39 k ansible-srpm-macros noarch 1-12.fc38 updates 21 k audit-libs x86_64 3.1.2-8.fc38 updates 117 k authselect x86_64 1.4.3-1.fc38 updates 149 k authselect-libs x86_64 1.4.3-1.fc38 updates 249 k basesystem noarch 11-15.fc38 fedora 7.0 k binutils x86_64 2.39-16.fc38 updates 5.4 M binutils-gold x86_64 2.39-16.fc38 updates 795 k bzip2-libs x86_64 1.0.8-13.fc38 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-1.0.fc38 updates 837 k coreutils-common x86_64 9.1-12.fc38 updates 2.0 M cracklib x86_64 2.9.11-1.fc38 updates 93 k crypto-policies noarch 20230301-1.gita12f7b2.fc38 fedora 93 k curl x86_64 8.0.1-7.fc38 updates 348 k cyrus-sasl-lib x86_64 2.1.28-9.fc38 fedora 794 k debugedit x86_64 5.0-9.fc38 updates 78 k dwz x86_64 0.15-2.fc38 fedora 135 k ed x86_64 1.19-2.fc38 fedora 78 k efi-srpm-macros noarch 5-7.fc38 fedora 22 k elfutils x86_64 0.191-1.fc38 updates 557 k elfutils-debuginfod-client x86_64 0.191-1.fc38 updates 37 k elfutils-default-yama-scope noarch 0.191-1.fc38 updates 12 k elfutils-libelf x86_64 0.191-1.fc38 updates 208 k elfutils-libs x86_64 0.191-1.fc38 updates 263 k fedora-gpg-keys noarch 38-1 fedora 126 k fedora-release noarch 38-36 updates 12 k fedora-release-identity-basic noarch 38-36 updates 13 k fedora-repos noarch 38-1 fedora 9.1 k file x86_64 5.44-3.fc38 fedora 49 k file-libs x86_64 5.44-3.fc38 fedora 730 k filesystem x86_64 3.18-3.fc38 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 fedora 26 k forge-srpm-macros noarch 0.2.0-3.fc38 updates 19 k fpc-srpm-macros noarch 1.3-7.fc38 fedora 7.8 k gdb-minimal x86_64 14.1-3.fc38 updates 4.3 M gdbm-libs x86_64 1:1.23-3.fc38 fedora 56 k ghc-srpm-macros noarch 1.6.1-1.fc38 fedora 8.0 k glibc x86_64 2.37-18.fc38 updates 2.1 M glibc-common x86_64 2.37-18.fc38 updates 320 k glibc-gconv-extra x86_64 2.37-18.fc38 updates 1.6 M gmp x86_64 1:6.2.1-4.fc38 fedora 313 k gnat-srpm-macros noarch 6-2.fc38 fedora 8.8 k go-srpm-macros noarch 3.5.0-1.fc38 updates 27 k jansson x86_64 2.13.1-6.fc38 fedora 44 k kernel-srpm-macros noarch 1.0-19.fc38 updates 10 k keyutils-libs x86_64 1.6.3-1.fc38 updates 31 k krb5-libs x86_64 1.21-3.fc38 updates 764 k libacl x86_64 2.3.1-7.fc38 updates 23 k libarchive x86_64 3.6.1-4.fc38 fedora 400 k libattr x86_64 2.5.1-6.fc38 fedora 18 k libblkid x86_64 2.38.1-4.fc38 fedora 106 k libbrotli x86_64 1.0.9-11.fc38 fedora 317 k libcap x86_64 2.48-8.fc38 updates 68 k libcap-ng x86_64 0.8.3-8.fc38 updates 32 k libcom_err x86_64 1.46.5-4.fc38 fedora 26 k libcurl x86_64 8.0.1-7.fc38 updates 315 k libdb x86_64 5.3.28-55.fc38 fedora 758 k libeconf x86_64 0.5.2-1.fc38 updates 30 k libevent x86_64 2.1.12-8.fc38 fedora 257 k libfdisk x86_64 2.38.1-4.fc38 fedora 161 k libffi x86_64 3.4.4-2.fc38 fedora 38 k libgcc x86_64 13.2.1-7.fc38 updates 115 k libgomp x86_64 13.2.1-7.fc38 updates 324 k libidn2 x86_64 2.3.7-1.fc38 updates 119 k libmount x86_64 2.38.1-4.fc38 fedora 135 k libnghttp2 x86_64 1.52.0-2.fc38 updates 75 k libnsl2 x86_64 2.0.0-5.fc38 fedora 30 k libpkgconf x86_64 1.8.0-6.fc38 fedora 35 k libpsl x86_64 0.21.2-2.fc38 fedora 65 k libpwquality x86_64 1.4.5-3.fc38 fedora 119 k libselinux x86_64 3.5-1.fc38 fedora 87 k libsemanage x86_64 3.5-2.fc38 fedora 120 k libsepol x86_64 3.5-1.fc38 fedora 324 k libsigsegv x86_64 2.14-4.fc38 fedora 27 k libsmartcols x86_64 2.38.1-4.fc38 fedora 64 k libssh x86_64 0.10.6-2.fc38 updates 212 k libssh-config noarch 0.10.6-2.fc38 updates 9.0 k libstdc++ x86_64 13.2.1-7.fc38 updates 870 k libtasn1 x86_64 4.19.0-2.fc38 fedora 74 k libtirpc x86_64 1.3.4-1.rc3.fc38 updates 93 k libunistring x86_64 1.1-3.fc38 fedora 545 k libunistring1.0 x86_64 1.0-1.fc38 fedora 539 k libutempter x86_64 1.2.1-8.fc38 fedora 26 k libuuid x86_64 2.38.1-4.fc38 fedora 28 k libverto x86_64 0.3.2-5.fc38 fedora 21 k libxcrypt x86_64 4.4.36-1.fc38 updates 119 k libxml2 x86_64 2.10.4-1.fc38 updates 701 k libzstd x86_64 1.5.5-1.fc38 updates 308 k lua-libs x86_64 5.4.4-9.fc38 fedora 133 k lua-srpm-macros noarch 1-13.fc38 updates 8.7 k lz4-libs x86_64 1.9.4-2.fc38 fedora 67 k mpfr x86_64 4.1.1-3.fc38 fedora 600 k ncurses-base noarch 6.4-7.20230520.fc38.1 updates 88 k ncurses-libs x86_64 6.4-7.20230520.fc38.1 updates 336 k ocaml-srpm-macros noarch 7-3.fc38 fedora 13 k openblas-srpm-macros noarch 2-13.fc38 fedora 7.5 k openldap x86_64 2.6.6-1.fc38 updates 254 k openssl-libs x86_64 1:3.0.9-2.fc38 updates 2.1 M p11-kit x86_64 0.25.3-1.fc38 updates 521 k p11-kit-trust x86_64 0.25.3-1.fc38 updates 142 k package-notes-srpm-macros noarch 0.5-8.fc38 updates 11 k pam x86_64 1.5.2-16.fc38 fedora 560 k pam-libs x86_64 1.5.2-16.fc38 fedora 58 k pcre2 x86_64 10.42-1.fc38.1 fedora 234 k pcre2-syntax noarch 10.42-1.fc38.1 fedora 144 k perl-srpm-macros noarch 1-48.fc38 fedora 8.4 k pkgconf x86_64 1.8.0-6.fc38 fedora 41 k pkgconf-m4 noarch 1.8.0-6.fc38 fedora 14 k pkgconf-pkg-config x86_64 1.8.0-6.fc38 fedora 9.6 k popt x86_64 1.19-2.fc38 fedora 67 k publicsuffix-list-dafsa noarch 20240107-1.fc38 updates 58 k pyproject-srpm-macros noarch 1.12.0-1.fc38 updates 14 k python-srpm-macros noarch 3.11-10.fc38 fedora 26 k qt5-srpm-macros noarch 5.15.12-1.fc38 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc38 updates 8.6 k readline x86_64 8.2-4.fc38 updates 212 k rpm x86_64 4.18.2-1.fc38 updates 567 k rpm-build-libs x86_64 4.18.2-1.fc38 updates 93 k rpm-libs x86_64 4.18.2-1.fc38 updates 310 k rpm-sequoia x86_64 1.6.0-1.fc38 updates 872 k rpmautospec-rpm-macros noarch 0.6.3-1.fc38 updates 10 k rust-srpm-macros noarch 26.2-1.fc38 updates 13 k setup noarch 2.14.3-2.fc38 fedora 152 k sqlite-libs x86_64 3.40.1-2.fc38 fedora 666 k systemd-libs x86_64 253.17-1.fc38 updates 649 k tzdata noarch 2024a-1.fc38 updates 715 k util-linux-core x86_64 2.38.1-4.fc38 fedora 473 k xxhash-libs x86_64 0.8.2-1.fc38 updates 37 k xz-libs x86_64 5.4.1-1.fc38 fedora 108 k zip x86_64 3.0-37.fc38 updates 265 k zlib x86_64 1.2.13-3.fc38 fedora 95 k zstd x86_64 1.5.5-1.fc38 updates 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 154 Packages Total size: 54 M Installed size: 187 M Downloading Packages: [SKIPPED] basesystem-11-15.fc38.noarch.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-14.fc38.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20230301-1.gita12f7b2.fc38.noarch.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-9.fc38.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.15-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] ed-1.19-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-7.fc38.noarch.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-38-1.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-38-1.noarch.rpm: Already downloaded [SKIPPED] file-5.44-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.44-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] filesystem-3.18-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.9.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-11.fc38.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-7.fc38.noarch.rpm: Already downloaded [SKIPPED] gawk-5.1.1-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.6.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] gmp-6.2.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-6-2.fc38.noarch.rpm: Already downloaded [SKIPPED] grep-3.8-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.12-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] info-7.0.2-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] jansson-2.13.1-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.6.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.5.1-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.46.5-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-55.fc38.x86_64.rpm: Already downloaded [SKIPPED] libevent-2.1.12-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libffi-3.4.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libmount-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpkgconf-1.8.0-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpsl-0.21.2-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libselinux-3.5-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsemanage-3.5-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsepol-3.5-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libtasn1-4.19.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libunistring-1.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libunistring1.0-1.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libverto-0.3.2-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] lua-libs-5.4.4-9.fc38.x86_64.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] mpfr-4.1.1-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] 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shadow-utils-4.13-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.40.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] tar-1.34-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] unzip-6.0-60.fc38.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] util-linux-core-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-39.fc38.x86_64.rpm: Already downloaded [SKIPPED] xz-5.4.1-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.4.1-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.13-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] alternatives-1.26-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-12.fc38.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] authselect-1.4.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] bash-5.2.26-1.fc38.x86_64.rpm: Already 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rpm-build-4.18.2-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.18.2-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.18.2-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpm-sequoia-1.6.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] rpmautospec-rpm-macros-0.6.3-1.fc38.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-26.2-1.fc38.noarch.rpm: Already downloaded [SKIPPED] systemd-libs-253.17-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2024a-1.fc38.noarch.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.2-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-37.fc38.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.5.5-1.fc38.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xEB10B464: Userid : "Fedora (38) " Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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Installing : rpm-build-libs-4.18.2-1.fc38.x86_64 136/154 Installing : curl-8.0.1-7.fc38.x86_64 137/154 Running scriptlet: rpm-4.18.2-1.fc38.x86_64 138/154 Installing : rpm-4.18.2-1.fc38.x86_64 138/154 Installing : efi-srpm-macros-5-7.fc38.noarch 139/154 Installing : lua-srpm-macros-1-13.fc38.noarch 140/154 Installing : rpmautospec-rpm-macros-0.6.3-1.fc38.noarch 141/154 Installing : xxhash-libs-0.8.2-1.fc38.x86_64 142/154 Installing : gdb-minimal-14.1-3.fc38.x86_64 143/154 Installing : debugedit-5.0-9.fc38.x86_64 144/154 Installing : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 145/154 Installing : python-srpm-macros-3.11-10.fc38.noarch 146/154 Installing : forge-srpm-macros-0.2.0-3.fc38.noarch 147/154 Installing : go-srpm-macros-3.5.0-1.fc38.noarch 148/154 Installing : redhat-rpm-config-257-1.fc38.noarch 149/154 Installing : rpm-build-4.18.2-1.fc38.x86_64 150/154 Installing : pyproject-srpm-macros-1.12.0-1.fc38.noarch 151/154 Installing : util-linux-2.38.1-4.fc38.x86_64 152/154 Installing : which-2.21-39.fc38.x86_64 153/154 Installing : info-7.0.2-2.fc38.x86_64 154/154 Running scriptlet: filesystem-3.18-3.fc38.x86_64 154/154 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 154/154 Running scriptlet: authselect-libs-1.4.3-1.fc38.x86_64 154/154 Running scriptlet: rpm-4.18.2-1.fc38.x86_64 154/154 Running scriptlet: info-7.0.2-2.fc38.x86_64 154/154 Verifying : basesystem-11-15.fc38.noarch 1/154 Verifying : bzip2-1.0.8-13.fc38.x86_64 2/154 Verifying : bzip2-libs-1.0.8-13.fc38.x86_64 3/154 Verifying : cpio-2.13-14.fc38.x86_64 4/154 Verifying : crypto-policies-20230301-1.gita12f7b2.fc38.noarc 5/154 Verifying : cyrus-sasl-lib-2.1.28-9.fc38.x86_64 6/154 Verifying : dwz-0.15-2.fc38.x86_64 7/154 Verifying : ed-1.19-2.fc38.x86_64 8/154 Verifying : efi-srpm-macros-5-7.fc38.noarch 9/154 Verifying : fedora-gpg-keys-38-1.noarch 10/154 Verifying : fedora-repos-38-1.noarch 11/154 Verifying : file-5.44-3.fc38.x86_64 12/154 Verifying : file-libs-5.44-3.fc38.x86_64 13/154 Verifying : filesystem-3.18-3.fc38.x86_64 14/154 Verifying : findutils-1:4.9.0-3.fc38.x86_64 15/154 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 16/154 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 17/154 Verifying : gawk-5.1.1-5.fc38.x86_64 18/154 Verifying : gdbm-libs-1:1.23-3.fc38.x86_64 19/154 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 20/154 Verifying : gmp-1:6.2.1-4.fc38.x86_64 21/154 Verifying : gnat-srpm-macros-6-2.fc38.noarch 22/154 Verifying : grep-3.8-3.fc38.x86_64 23/154 Verifying : gzip-1.12-3.fc38.x86_64 24/154 Verifying : info-7.0.2-2.fc38.x86_64 25/154 Verifying : jansson-2.13.1-6.fc38.x86_64 26/154 Verifying : libarchive-3.6.1-4.fc38.x86_64 27/154 Verifying : libattr-2.5.1-6.fc38.x86_64 28/154 Verifying : libblkid-2.38.1-4.fc38.x86_64 29/154 Verifying : libbrotli-1.0.9-11.fc38.x86_64 30/154 Verifying : libcom_err-1.46.5-4.fc38.x86_64 31/154 Verifying : libdb-5.3.28-55.fc38.x86_64 32/154 Verifying : libevent-2.1.12-8.fc38.x86_64 33/154 Verifying : libfdisk-2.38.1-4.fc38.x86_64 34/154 Verifying : libffi-3.4.4-2.fc38.x86_64 35/154 Verifying : libmount-2.38.1-4.fc38.x86_64 36/154 Verifying : libnsl2-2.0.0-5.fc38.x86_64 37/154 Verifying : libpkgconf-1.8.0-6.fc38.x86_64 38/154 Verifying : libpsl-0.21.2-2.fc38.x86_64 39/154 Verifying : libpwquality-1.4.5-3.fc38.x86_64 40/154 Verifying : libselinux-3.5-1.fc38.x86_64 41/154 Verifying : libsemanage-3.5-2.fc38.x86_64 42/154 Verifying : libsepol-3.5-1.fc38.x86_64 43/154 Verifying : libsigsegv-2.14-4.fc38.x86_64 44/154 Verifying : libsmartcols-2.38.1-4.fc38.x86_64 45/154 Verifying : libtasn1-4.19.0-2.fc38.x86_64 46/154 Verifying : libunistring-1.1-3.fc38.x86_64 47/154 Verifying : libunistring1.0-1.0-1.fc38.x86_64 48/154 Verifying : libutempter-1.2.1-8.fc38.x86_64 49/154 Verifying : libuuid-2.38.1-4.fc38.x86_64 50/154 Verifying : libverto-0.3.2-5.fc38.x86_64 51/154 Verifying : lua-libs-5.4.4-9.fc38.x86_64 52/154 Verifying : lz4-libs-1.9.4-2.fc38.x86_64 53/154 Verifying : mpfr-4.1.1-3.fc38.x86_64 54/154 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 55/154 Verifying : openblas-srpm-macros-2-13.fc38.noarch 56/154 Verifying : pam-1.5.2-16.fc38.x86_64 57/154 Verifying : pam-libs-1.5.2-16.fc38.x86_64 58/154 Verifying : patch-2.7.6-19.fc38.x86_64 59/154 Verifying : pcre2-10.42-1.fc38.1.x86_64 60/154 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 61/154 Verifying : perl-srpm-macros-1-48.fc38.noarch 62/154 Verifying : pkgconf-1.8.0-6.fc38.x86_64 63/154 Verifying : pkgconf-m4-1.8.0-6.fc38.noarch 64/154 Verifying : pkgconf-pkg-config-1.8.0-6.fc38.x86_64 65/154 Verifying : popt-1.19-2.fc38.x86_64 66/154 Verifying : python-srpm-macros-3.11-10.fc38.noarch 67/154 Verifying : sed-4.8-12.fc38.x86_64 68/154 Verifying : setup-2.14.3-2.fc38.noarch 69/154 Verifying : shadow-utils-2:4.13-6.fc38.x86_64 70/154 Verifying : sqlite-libs-3.40.1-2.fc38.x86_64 71/154 Verifying : tar-2:1.34-8.fc38.x86_64 72/154 Verifying : unzip-6.0-60.fc38.x86_64 73/154 Verifying : util-linux-2.38.1-4.fc38.x86_64 74/154 Verifying : util-linux-core-2.38.1-4.fc38.x86_64 75/154 Verifying : which-2.21-39.fc38.x86_64 76/154 Verifying : xz-5.4.1-1.fc38.x86_64 77/154 Verifying : xz-libs-5.4.1-1.fc38.x86_64 78/154 Verifying : zlib-1.2.13-3.fc38.x86_64 79/154 Verifying : alternatives-1.26-1.fc38.x86_64 80/154 Verifying : ansible-srpm-macros-1-12.fc38.noarch 81/154 Verifying : audit-libs-3.1.2-8.fc38.x86_64 82/154 Verifying : authselect-1.4.3-1.fc38.x86_64 83/154 Verifying : authselect-libs-1.4.3-1.fc38.x86_64 84/154 Verifying : bash-5.2.26-1.fc38.x86_64 85/154 Verifying : binutils-2.39-16.fc38.x86_64 86/154 Verifying : binutils-gold-2.39-16.fc38.x86_64 87/154 Verifying : ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noar 88/154 Verifying : coreutils-9.1-12.fc38.x86_64 89/154 Verifying : coreutils-common-9.1-12.fc38.x86_64 90/154 Verifying : cracklib-2.9.11-1.fc38.x86_64 91/154 Verifying : curl-8.0.1-7.fc38.x86_64 92/154 Verifying : debugedit-5.0-9.fc38.x86_64 93/154 Verifying : diffutils-3.10-1.fc38.x86_64 94/154 Verifying : elfutils-0.191-1.fc38.x86_64 95/154 Verifying : elfutils-debuginfod-client-0.191-1.fc38.x86_64 96/154 Verifying : elfutils-default-yama-scope-0.191-1.fc38.noarch 97/154 Verifying : elfutils-libelf-0.191-1.fc38.x86_64 98/154 Verifying : elfutils-libs-0.191-1.fc38.x86_64 99/154 Verifying : fedora-release-38-36.noarch 100/154 Verifying : fedora-release-common-38-36.noarch 101/154 Verifying : fedora-release-identity-basic-38-36.noarch 102/154 Verifying : forge-srpm-macros-0.2.0-3.fc38.noarch 103/154 Verifying : gdb-minimal-14.1-3.fc38.x86_64 104/154 Verifying : glibc-2.37-18.fc38.x86_64 105/154 Verifying : glibc-common-2.37-18.fc38.x86_64 106/154 Verifying : glibc-gconv-extra-2.37-18.fc38.x86_64 107/154 Verifying : glibc-minimal-langpack-2.37-18.fc38.x86_64 108/154 Verifying : go-srpm-macros-3.5.0-1.fc38.noarch 109/154 Verifying : kernel-srpm-macros-1.0-19.fc38.noarch 110/154 Verifying : keyutils-libs-1.6.3-1.fc38.x86_64 111/154 Verifying : krb5-libs-1.21-3.fc38.x86_64 112/154 Verifying : libacl-2.3.1-7.fc38.x86_64 113/154 Verifying : libcap-2.48-8.fc38.x86_64 114/154 Verifying : libcap-ng-0.8.3-8.fc38.x86_64 115/154 Verifying : libcurl-8.0.1-7.fc38.x86_64 116/154 Verifying : libeconf-0.5.2-1.fc38.x86_64 117/154 Verifying : libgcc-13.2.1-7.fc38.x86_64 118/154 Verifying : libgomp-13.2.1-7.fc38.x86_64 119/154 Verifying : libidn2-2.3.7-1.fc38.x86_64 120/154 Verifying : libnghttp2-1.52.0-2.fc38.x86_64 121/154 Verifying : libssh-0.10.6-2.fc38.x86_64 122/154 Verifying : libssh-config-0.10.6-2.fc38.noarch 123/154 Verifying : libstdc++-13.2.1-7.fc38.x86_64 124/154 Verifying : libtirpc-1.3.4-1.rc3.fc38.x86_64 125/154 Verifying : libxcrypt-4.4.36-1.fc38.x86_64 126/154 Verifying : libxml2-2.10.4-1.fc38.x86_64 127/154 Verifying : libzstd-1.5.5-1.fc38.x86_64 128/154 Verifying : lua-srpm-macros-1-13.fc38.noarch 129/154 Verifying : ncurses-base-6.4-7.20230520.fc38.1.noarch 130/154 Verifying : ncurses-libs-6.4-7.20230520.fc38.1.x86_64 131/154 Verifying : openldap-2.6.6-1.fc38.x86_64 132/154 Verifying : openssl-libs-1:3.0.9-2.fc38.x86_64 133/154 Verifying : p11-kit-0.25.3-1.fc38.x86_64 134/154 Verifying : p11-kit-trust-0.25.3-1.fc38.x86_64 135/154 Verifying : package-notes-srpm-macros-0.5-8.fc38.noarch 136/154 Verifying : publicsuffix-list-dafsa-20240107-1.fc38.noarch 137/154 Verifying : pyproject-srpm-macros-1.12.0-1.fc38.noarch 138/154 Verifying : qt5-srpm-macros-5.15.12-1.fc38.noarch 139/154 Verifying : qt6-srpm-macros-6.6.0-1.fc38.noarch 140/154 Verifying : readline-8.2-4.fc38.x86_64 141/154 Verifying : redhat-rpm-config-257-1.fc38.noarch 142/154 Verifying : rpm-4.18.2-1.fc38.x86_64 143/154 Verifying : rpm-build-4.18.2-1.fc38.x86_64 144/154 Verifying : rpm-build-libs-4.18.2-1.fc38.x86_64 145/154 Verifying : rpm-libs-4.18.2-1.fc38.x86_64 146/154 Verifying : rpm-sequoia-1.6.0-1.fc38.x86_64 147/154 Verifying : rpmautospec-rpm-macros-0.6.3-1.fc38.noarch 148/154 Verifying : rust-srpm-macros-26.2-1.fc38.noarch 149/154 Verifying : systemd-libs-253.17-1.fc38.x86_64 150/154 Verifying : tzdata-2024a-1.fc38.noarch 151/154 Verifying : xxhash-libs-0.8.2-1.fc38.x86_64 152/154 Verifying : zip-3.0-37.fc38.x86_64 153/154 Verifying : zstd-1.5.5-1.fc38.x86_64 154/154 Installed products updated. Installed: alternatives-1.26-1.fc38.x86_64 ansible-srpm-macros-1-12.fc38.noarch audit-libs-3.1.2-8.fc38.x86_64 authselect-1.4.3-1.fc38.x86_64 authselect-libs-1.4.3-1.fc38.x86_64 basesystem-11-15.fc38.noarch bash-5.2.26-1.fc38.x86_64 binutils-2.39-16.fc38.x86_64 binutils-gold-2.39-16.fc38.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noarch coreutils-9.1-12.fc38.x86_64 coreutils-common-9.1-12.fc38.x86_64 cpio-2.13-14.fc38.x86_64 cracklib-2.9.11-1.fc38.x86_64 crypto-policies-20230301-1.gita12f7b2.fc38.noarch curl-8.0.1-7.fc38.x86_64 cyrus-sasl-lib-2.1.28-9.fc38.x86_64 debugedit-5.0-9.fc38.x86_64 diffutils-3.10-1.fc38.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-7.fc38.noarch elfutils-0.191-1.fc38.x86_64 elfutils-debuginfod-client-0.191-1.fc38.x86_64 elfutils-default-yama-scope-0.191-1.fc38.noarch elfutils-libelf-0.191-1.fc38.x86_64 elfutils-libs-0.191-1.fc38.x86_64 fedora-gpg-keys-38-1.noarch fedora-release-38-36.noarch fedora-release-common-38-36.noarch fedora-release-identity-basic-38-36.noarch fedora-repos-38-1.noarch file-5.44-3.fc38.x86_64 file-libs-5.44-3.fc38.x86_64 filesystem-3.18-3.fc38.x86_64 findutils-1:4.9.0-3.fc38.x86_64 fonts-srpm-macros-1:2.0.5-11.fc38.noarch forge-srpm-macros-0.2.0-3.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.1.1-5.fc38.x86_64 gdb-minimal-14.1-3.fc38.x86_64 gdbm-libs-1:1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37-18.fc38.x86_64 glibc-common-2.37-18.fc38.x86_64 glibc-gconv-extra-2.37-18.fc38.x86_64 glibc-minimal-langpack-2.37-18.fc38.x86_64 gmp-1:6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.5.0-1.fc38.noarch grep-3.8-3.fc38.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.2-2.fc38.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc38.noarch keyutils-libs-1.6.3-1.fc38.x86_64 krb5-libs-1.21-3.fc38.x86_64 libacl-2.3.1-7.fc38.x86_64 libarchive-3.6.1-4.fc38.x86_64 libattr-2.5.1-6.fc38.x86_64 libblkid-2.38.1-4.fc38.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-8.fc38.x86_64 libcap-ng-0.8.3-8.fc38.x86_64 libcom_err-1.46.5-4.fc38.x86_64 libcurl-8.0.1-7.fc38.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.5.2-1.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.38.1-4.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.2.1-7.fc38.x86_64 libgomp-13.2.1-7.fc38.x86_64 libidn2-2.3.7-1.fc38.x86_64 libmount-2.38.1-4.fc38.x86_64 libnghttp2-1.52.0-2.fc38.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.8.0-6.fc38.x86_64 libpsl-0.21.2-2.fc38.x86_64 libpwquality-1.4.5-3.fc38.x86_64 libselinux-3.5-1.fc38.x86_64 libsemanage-3.5-2.fc38.x86_64 libsepol-3.5-1.fc38.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.38.1-4.fc38.x86_64 libssh-0.10.6-2.fc38.x86_64 libssh-config-0.10.6-2.fc38.noarch libstdc++-13.2.1-7.fc38.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.4-1.rc3.fc38.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-8.fc38.x86_64 libuuid-2.38.1-4.fc38.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.36-1.fc38.x86_64 libxml2-2.10.4-1.fc38.x86_64 libzstd-1.5.5-1.fc38.x86_64 lua-libs-5.4.4-9.fc38.x86_64 lua-srpm-macros-1-13.fc38.noarch lz4-libs-1.9.4-2.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-7.20230520.fc38.1.noarch ncurses-libs-6.4-7.20230520.fc38.1.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.6-1.fc38.x86_64 openssl-libs-1:3.0.9-2.fc38.x86_64 p11-kit-0.25.3-1.fc38.x86_64 p11-kit-trust-0.25.3-1.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc38.noarch pam-1.5.2-16.fc38.x86_64 pam-libs-1.5.2-16.fc38.x86_64 patch-2.7.6-19.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.8.0-6.fc38.x86_64 pkgconf-m4-1.8.0-6.fc38.noarch pkgconf-pkg-config-1.8.0-6.fc38.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20240107-1.fc38.noarch pyproject-srpm-macros-1.12.0-1.fc38.noarch python-srpm-macros-3.11-10.fc38.noarch qt5-srpm-macros-5.15.12-1.fc38.noarch qt6-srpm-macros-6.6.0-1.fc38.noarch readline-8.2-4.fc38.x86_64 redhat-rpm-config-257-1.fc38.noarch rpm-4.18.2-1.fc38.x86_64 rpm-build-4.18.2-1.fc38.x86_64 rpm-build-libs-4.18.2-1.fc38.x86_64 rpm-libs-4.18.2-1.fc38.x86_64 rpm-sequoia-1.6.0-1.fc38.x86_64 rpmautospec-rpm-macros-0.6.3-1.fc38.noarch rust-srpm-macros-26.2-1.fc38.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-2.fc38.noarch shadow-utils-2:4.13-6.fc38.x86_64 sqlite-libs-3.40.1-2.fc38.x86_64 systemd-libs-253.17-1.fc38.x86_64 tar-2:1.34-8.fc38.x86_64 tzdata-2024a-1.fc38.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.38.1-4.fc38.x86_64 util-linux-core-2.38.1-4.fc38.x86_64 which-2.21-39.fc38.x86_64 xxhash-libs-0.8.2-1.fc38.x86_64 xz-5.4.1-1.fc38.x86_64 xz-libs-5.4.1-1.fc38.x86_64 zip-3.0-37.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc38.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-1.fc38.x86_64 ansible-srpm-macros-1-12.fc38.noarch audit-libs-3.1.2-8.fc38.x86_64 authselect-1.4.3-1.fc38.x86_64 authselect-libs-1.4.3-1.fc38.x86_64 basesystem-11-15.fc38.noarch bash-5.2.26-1.fc38.x86_64 binutils-2.39-16.fc38.x86_64 binutils-gold-2.39-16.fc38.x86_64 bzip2-1.0.8-13.fc38.x86_64 bzip2-libs-1.0.8-13.fc38.x86_64 ca-certificates-2023.2.60_v7.0.306-1.0.fc38.noarch coreutils-9.1-12.fc38.x86_64 coreutils-common-9.1-12.fc38.x86_64 cpio-2.13-14.fc38.x86_64 cracklib-2.9.11-1.fc38.x86_64 crypto-policies-20230301-1.gita12f7b2.fc38.noarch curl-8.0.1-7.fc38.x86_64 cyrus-sasl-lib-2.1.28-9.fc38.x86_64 debugedit-5.0-9.fc38.x86_64 diffutils-3.10-1.fc38.x86_64 dwz-0.15-2.fc38.x86_64 ed-1.19-2.fc38.x86_64 efi-srpm-macros-5-7.fc38.noarch elfutils-0.191-1.fc38.x86_64 elfutils-debuginfod-client-0.191-1.fc38.x86_64 elfutils-default-yama-scope-0.191-1.fc38.noarch elfutils-libelf-0.191-1.fc38.x86_64 elfutils-libs-0.191-1.fc38.x86_64 fedora-gpg-keys-38-1.noarch fedora-release-38-36.noarch fedora-release-common-38-36.noarch fedora-release-identity-basic-38-36.noarch fedora-repos-38-1.noarch file-5.44-3.fc38.x86_64 file-libs-5.44-3.fc38.x86_64 filesystem-3.18-3.fc38.x86_64 findutils-4.9.0-3.fc38.x86_64 fonts-srpm-macros-2.0.5-11.fc38.noarch forge-srpm-macros-0.2.0-3.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.1.1-5.fc38.x86_64 gdb-minimal-14.1-3.fc38.x86_64 gdbm-libs-1.23-3.fc38.x86_64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37-18.fc38.x86_64 glibc-common-2.37-18.fc38.x86_64 glibc-gconv-extra-2.37-18.fc38.x86_64 glibc-minimal-langpack-2.37-18.fc38.x86_64 gmp-6.2.1-4.fc38.x86_64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.5.0-1.fc38.noarch gpg-pubkey-eb10b464-6202d9c6 grep-3.8-3.fc38.x86_64 gzip-1.12-3.fc38.x86_64 info-7.0.2-2.fc38.x86_64 jansson-2.13.1-6.fc38.x86_64 kernel-srpm-macros-1.0-19.fc38.noarch keyutils-libs-1.6.3-1.fc38.x86_64 krb5-libs-1.21-3.fc38.x86_64 libacl-2.3.1-7.fc38.x86_64 libarchive-3.6.1-4.fc38.x86_64 libattr-2.5.1-6.fc38.x86_64 libblkid-2.38.1-4.fc38.x86_64 libbrotli-1.0.9-11.fc38.x86_64 libcap-2.48-8.fc38.x86_64 libcap-ng-0.8.3-8.fc38.x86_64 libcom_err-1.46.5-4.fc38.x86_64 libcurl-8.0.1-7.fc38.x86_64 libdb-5.3.28-55.fc38.x86_64 libeconf-0.5.2-1.fc38.x86_64 libevent-2.1.12-8.fc38.x86_64 libfdisk-2.38.1-4.fc38.x86_64 libffi-3.4.4-2.fc38.x86_64 libgcc-13.2.1-7.fc38.x86_64 libgomp-13.2.1-7.fc38.x86_64 libidn2-2.3.7-1.fc38.x86_64 libmount-2.38.1-4.fc38.x86_64 libnghttp2-1.52.0-2.fc38.x86_64 libnsl2-2.0.0-5.fc38.x86_64 libpkgconf-1.8.0-6.fc38.x86_64 libpsl-0.21.2-2.fc38.x86_64 libpwquality-1.4.5-3.fc38.x86_64 libselinux-3.5-1.fc38.x86_64 libsemanage-3.5-2.fc38.x86_64 libsepol-3.5-1.fc38.x86_64 libsigsegv-2.14-4.fc38.x86_64 libsmartcols-2.38.1-4.fc38.x86_64 libssh-0.10.6-2.fc38.x86_64 libssh-config-0.10.6-2.fc38.noarch libstdc++-13.2.1-7.fc38.x86_64 libtasn1-4.19.0-2.fc38.x86_64 libtirpc-1.3.4-1.rc3.fc38.x86_64 libunistring-1.1-3.fc38.x86_64 libunistring1.0-1.0-1.fc38.x86_64 libutempter-1.2.1-8.fc38.x86_64 libuuid-2.38.1-4.fc38.x86_64 libverto-0.3.2-5.fc38.x86_64 libxcrypt-4.4.36-1.fc38.x86_64 libxml2-2.10.4-1.fc38.x86_64 libzstd-1.5.5-1.fc38.x86_64 lua-libs-5.4.4-9.fc38.x86_64 lua-srpm-macros-1-13.fc38.noarch lz4-libs-1.9.4-2.fc38.x86_64 mpfr-4.1.1-3.fc38.x86_64 ncurses-base-6.4-7.20230520.fc38.1.noarch ncurses-libs-6.4-7.20230520.fc38.1.x86_64 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.6-1.fc38.x86_64 openssl-libs-3.0.9-2.fc38.x86_64 p11-kit-0.25.3-1.fc38.x86_64 p11-kit-trust-0.25.3-1.fc38.x86_64 package-notes-srpm-macros-0.5-8.fc38.noarch pam-1.5.2-16.fc38.x86_64 pam-libs-1.5.2-16.fc38.x86_64 patch-2.7.6-19.fc38.x86_64 pcre2-10.42-1.fc38.1.x86_64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.8.0-6.fc38.x86_64 pkgconf-m4-1.8.0-6.fc38.noarch pkgconf-pkg-config-1.8.0-6.fc38.x86_64 popt-1.19-2.fc38.x86_64 publicsuffix-list-dafsa-20240107-1.fc38.noarch pyproject-srpm-macros-1.12.0-1.fc38.noarch python-srpm-macros-3.11-10.fc38.noarch qt5-srpm-macros-5.15.12-1.fc38.noarch qt6-srpm-macros-6.6.0-1.fc38.noarch readline-8.2-4.fc38.x86_64 redhat-rpm-config-257-1.fc38.noarch rpm-4.18.2-1.fc38.x86_64 rpm-build-4.18.2-1.fc38.x86_64 rpm-build-libs-4.18.2-1.fc38.x86_64 rpm-libs-4.18.2-1.fc38.x86_64 rpm-sequoia-1.6.0-1.fc38.x86_64 rpmautospec-rpm-macros-0.6.3-1.fc38.noarch rust-srpm-macros-26.2-1.fc38.noarch sed-4.8-12.fc38.x86_64 setup-2.14.3-2.fc38.noarch shadow-utils-4.13-6.fc38.x86_64 sqlite-libs-3.40.1-2.fc38.x86_64 systemd-libs-253.17-1.fc38.x86_64 tar-1.34-8.fc38.x86_64 tzdata-2024a-1.fc38.noarch unzip-6.0-60.fc38.x86_64 util-linux-2.38.1-4.fc38.x86_64 util-linux-core-2.38.1-4.fc38.x86_64 which-2.21-39.fc38.x86_64 xxhash-libs-0.8.2-1.fc38.x86_64 xz-5.4.1-1.fc38.x86_64 xz-libs-5.4.1-1.fc38.x86_64 zip-3.0-37.fc38.x86_64 zlib-1.2.13-3.fc38.x86_64 zstd-1.5.5-1.fc38.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.log /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.librepo.log /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.rpm.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-9uzm3bqs/R-CRAN-galamm/R-CRAN-galamm.spec) Config(child) 0 minutes 29 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm) Config(fedora-38-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-38-x86_64-1713089157.707426/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc39.noarch python3-dnf-plugins-core-4.6.0-1.fc39.noarch yum-4.19.2-1.fc39.noarch dnf5-5.1.17-1.fc39.x86_64 dnf5-plugins-5.1.17-1.fc39.x86_64 Finish: chroot init Start: build phase for R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm Start: build setup for R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 26 kB/s | 1.5 kB 00:00 fedora 68 kB/s | 24 kB 00:00 updates 142 kB/s | 21 kB 00:00 Dependencies resolved. ======================================================================================== Package Arch Version Repo Size ======================================================================================== Installing: R-CRAN-Matrix x86_64 1.6.5-1.fc38.copr6886765 copr_base 4.1 M R-CRAN-Rcpp x86_64 1.0.12-1.fc38.copr6877523 copr_base 2.0 M R-CRAN-RcppEigen x86_64 0.3.4.0.0-1.fc38.copr7306782 copr_base 1.4 M R-CRAN-Rdpack noarch 2.6-1.fc38.copr6614541 copr_base 791 k R-CRAN-lme4 x86_64 1.1.35.2-1.fc38.copr7307303 copr_base 4.1 M R-CRAN-memoise noarch 2.0.1-1.fc38.copr5817811 copr_base 63 k R-CRAN-mgcv x86_64 1.9.1-1.fc38.copr6775870 copr_base 3.3 M R-CRAN-nlme x86_64 3.1.164-1.fc38.copr6700968 copr_base 2.4 M R-core x86_64 4.3.3-1.fc38 updates 64 M R-devel x86_64 4.3.3-1.fc38 updates 10 k Installing dependencies: R-CRAN-MASS x86_64 7.3.60.0.1-1.fc38.copr6895092 copr_base 1.2 M R-CRAN-boot noarch 1.3.30-1.fc38.copr7307080 copr_base 700 k R-CRAN-cachem x86_64 1.0.8-1.fc38.copr5865786 copr_base 82 k R-CRAN-fastmap x86_64 1.1.1-1.fc38.copr5813019 copr_base 79 k R-CRAN-lattice x86_64 0.22.6-1.fc38.copr7307082 copr_base 1.4 M R-CRAN-minqa x86_64 1.2.6-1.fc38.copr6395773 copr_base 125 k R-CRAN-nloptr x86_64 2.0.3-1.fc38.copr5831161 copr_base 700 k R-CRAN-rbibutils x86_64 2.2.16-1.fc38.copr6566059 copr_base 700 k R-CRAN-rlang x86_64 1.1.3-1.fc38.copr6880930 copr_base 1.7 M R-core-devel x86_64 4.3.3-1.fc38 updates 94 k R-java x86_64 4.3.3-1.fc38 updates 11 k R-java-devel x86_64 4.3.3-1.fc38 updates 10 k R-littler x86_64 0.3.19-1.fc38 updates 76 k R-rpm-macros noarch 1.2.1-6.fc38 fedora 11 k alsa-lib x86_64 1.2.11-2.fc38 updates 520 k annobin-docs noarch 12.40-1.fc38 updates 87 k annobin-plugin-gcc x86_64 12.40-1.fc38 updates 955 k avahi-libs x86_64 0.8-22.fc38 updates 66 k brotli x86_64 1.0.9-11.fc38 fedora 316 k brotli-devel x86_64 1.0.9-11.fc38 fedora 31 k bzip2-devel x86_64 1.0.8-13.fc38 fedora 214 k cairo x86_64 1.17.8-4.fc38 updates 704 k cmake-filesystem x86_64 3.27.7-1.fc38 updates 19 k copy-jdk-configs noarch 4.1-2.fc38 fedora 28 k cpp x86_64 13.2.1-7.fc38 updates 11 M crypto-policies-scripts noarch 20230301-1.gita12f7b2.fc38 fedora 116 k cups-libs x86_64 1:2.4.7-11.fc38 updates 268 k dbus-libs x86_64 1:1.14.10-1.fc38 updates 156 k desktop-file-utils x86_64 0.26-8.fc38 fedora 71 k emacs-filesystem noarch 1:29.3-1.fc38 updates 7.2 k expat x86_64 2.6.0-1.fc38 updates 112 k flexiblas x86_64 3.4.2-1.fc38 updates 25 k flexiblas-devel x86_64 3.4.2-1.fc38 updates 121 k flexiblas-netlib x86_64 3.4.2-1.fc38 updates 3.1 M flexiblas-netlib64 x86_64 3.4.2-1.fc38 updates 3.0 M flexiblas-openblas-openmp x86_64 3.4.2-1.fc38 updates 17 k flexiblas-openblas-openmp64 x86_64 3.4.2-1.fc38 updates 17 k fontconfig x86_64 2.14.2-2.fc38 updates 295 k fontconfig-devel x86_64 2.14.2-2.fc38 updates 163 k fonts-filesystem noarch 1:2.0.5-11.fc38 fedora 8.1 k freetype x86_64 2.13.0-2.fc38 fedora 414 k freetype-devel x86_64 2.13.0-2.fc38 fedora 945 k fribidi x86_64 1.0.12-3.fc38 fedora 89 k gc x86_64 8.2.2-3.fc38 fedora 110 k gcc x86_64 13.2.1-7.fc38 updates 34 M gcc-c++ x86_64 13.2.1-7.fc38 updates 13 M gcc-gfortran x86_64 13.2.1-7.fc38 updates 12 M gcc-plugin-annobin x86_64 13.2.1-7.fc38 updates 52 k gettext x86_64 0.21.1-2.fc38 fedora 1.0 M gettext-envsubst x86_64 0.21.1-2.fc38 fedora 36 k gettext-libs x86_64 0.21.1-2.fc38 fedora 320 k gettext-runtime x86_64 0.21.1-2.fc38 fedora 117 k glib2 x86_64 2.76.6-1.fc38 updates 2.8 M glib2-devel x86_64 2.76.6-1.fc38 updates 586 k glibc-devel x86_64 2.37-18.fc38 updates 54 k glibc-headers-x86 noarch 2.37-18.fc38 updates 536 k gnutls x86_64 3.8.4-1.fc38 updates 1.1 M google-noto-fonts-common noarch 20230201-2.fc38 updates 16 k google-noto-sans-vf-fonts noarch 20230201-2.fc38 updates 579 k graphite2 x86_64 1.3.14-11.fc38 fedora 95 k graphite2-devel x86_64 1.3.14-11.fc38 fedora 20 k guile22 x86_64 2.2.7-7.fc38 fedora 6.5 M harfbuzz x86_64 7.1.0-1.fc38 fedora 889 k harfbuzz-devel x86_64 7.1.0-1.fc38 fedora 445 k harfbuzz-icu x86_64 7.1.0-1.fc38 fedora 16 k java-17-openjdk x86_64 1:17.0.9.0.9-3.fc38 updates 407 k java-17-openjdk-devel x86_64 1:17.0.9.0.9-3.fc38 updates 4.7 M java-17-openjdk-headless x86_64 1:17.0.9.0.9-3.fc38 updates 44 M javapackages-filesystem noarch 6.1.0-7.fc38 fedora 13 k jbigkit-libs x86_64 2.1-25.fc38 fedora 53 k kernel-headers x86_64 6.8.3-100.fc38 updates 1.6 M langpacks-core-font-en noarch 3.0-32.fc38 updates 9.6 k libICE x86_64 1.0.10-10.fc38 fedora 71 k libRmath x86_64 4.3.3-1.fc38 updates 122 k libRmath-devel x86_64 4.3.3-1.fc38 updates 16 k libSM x86_64 1.2.3-12.fc38 fedora 41 k libX11 x86_64 1.8.7-1.fc38 updates 650 k libX11-common noarch 1.8.7-1.fc38 updates 176 k libX11-devel x86_64 1.8.7-1.fc38 updates 1.0 M libX11-xcb x86_64 1.8.7-1.fc38 updates 12 k libXau x86_64 1.0.11-2.fc38 fedora 32 k libXau-devel x86_64 1.0.11-2.fc38 fedora 14 k libXcomposite x86_64 0.4.5-9.fc38 fedora 23 k libXext x86_64 1.3.5-2.fc38 fedora 39 k libXft x86_64 2.3.8-2.fc38 updates 72 k libXft-devel x86_64 2.3.8-2.fc38 updates 50 k libXi x86_64 1.8.1-1.fc38 updates 40 k libXmu x86_64 1.1.4-2.fc38 fedora 77 k libXrender x86_64 0.9.11-2.fc38 fedora 27 k libXrender-devel x86_64 0.9.11-2.fc38 fedora 19 k libXt x86_64 1.2.1-4.fc38 fedora 179 k libXtst x86_64 1.2.4-2.fc38 fedora 20 k libb2 x86_64 0.98.1-8.fc38 fedora 25 k libblkid-devel x86_64 2.38.1-4.fc38 fedora 16 k libdatrie x86_64 0.2.13-5.fc38 fedora 32 k libffi-devel x86_64 3.4.4-2.fc38 fedora 29 k libfontenc x86_64 1.1.6-2.fc38 fedora 32 k libgfortran x86_64 13.2.1-7.fc38 updates 910 k libicu x86_64 72.1-2.fc38 fedora 10 M libicu-devel x86_64 72.1-2.fc38 fedora 918 k libjpeg-turbo x86_64 2.1.4-2.fc38 fedora 183 k liblerc x86_64 4.0.0-3.fc38 fedora 202 k libmount-devel x86_64 2.38.1-4.fc38 fedora 18 k libmpc x86_64 1.3.1-2.fc38 fedora 70 k libpng x86_64 2:1.6.37-14.fc38 fedora 120 k libpng-devel x86_64 2:1.6.37-14.fc38 fedora 291 k libquadmath x86_64 13.2.1-7.fc38 updates 200 k libquadmath-devel x86_64 13.2.1-7.fc38 updates 41 k libselinux-devel x86_64 3.5-1.fc38 fedora 151 k libsepol-devel x86_64 3.5-1.fc38 fedora 49 k libstdc++-devel x86_64 13.2.1-7.fc38 updates 2.6 M libthai x86_64 0.1.29-4.fc38 fedora 213 k libtiff x86_64 4.4.0-8.fc38 updates 201 k libtirpc-devel x86_64 1.3.4-1.rc3.fc38 updates 124 k libtool-ltdl x86_64 2.4.7-6.fc38 fedora 37 k libwebp x86_64 1.3.2-2.fc38 updates 284 k libxcb x86_64 1.13.1-11.fc38 fedora 231 k libxcb-devel x86_64 1.13.1-11.fc38 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-1.fc38 updates 30 k libxml2-devel x86_64 2.10.4-1.fc38 updates 531 k lksctp-tools x86_64 1.0.19-3.fc38 fedora 92 k lua x86_64 5.4.4-9.fc38 fedora 190 k lua-posix x86_64 35.1-5.fc38 fedora 138 k make x86_64 1:4.4.1-1.fc38 updates 588 k mkfontscale x86_64 1.2.2-3.fc38 fedora 32 k mpdecimal x86_64 2.5.1-6.fc38 fedora 89 k nettle x86_64 3.8-3.fc38 fedora 412 k nspr x86_64 4.35.0-17.fc38 updates 137 k nss x86_64 3.99.0-1.fc38 updates 703 k nss-softokn x86_64 3.99.0-1.fc38 updates 419 k nss-softokn-freebl x86_64 3.99.0-1.fc38 updates 381 k nss-sysinit x86_64 3.99.0-1.fc38 updates 18 k nss-util x86_64 3.99.0-1.fc38 updates 87 k openblas x86_64 0.3.21-4.fc38 fedora 35 k openblas-openmp x86_64 0.3.21-4.fc38 fedora 5.1 M openblas-openmp64 x86_64 0.3.21-4.fc38 fedora 4.9 M pango x86_64 1.50.14-1.fc38 fedora 342 k pcre2-devel x86_64 10.42-1.fc38.1 fedora 506 k pcre2-utf16 x86_64 10.42-1.fc38.1 fedora 214 k pcre2-utf32 x86_64 10.42-1.fc38.1 fedora 201 k pixman x86_64 0.42.2-1.fc38 fedora 285 k python-pip-wheel noarch 22.3.1-3.fc38 updates 1.4 M python-setuptools-wheel noarch 65.5.1-2.fc38 fedora 715 k python3 x86_64 3.11.8-2.fc38 updates 28 k python3-libs x86_64 3.11.8-2.fc38 updates 9.6 M sysprof-capture-devel x86_64 3.48.0-1.fc38 fedora 58 k tcl x86_64 1:8.6.12-4.fc38 fedora 1.1 M tcl-devel x86_64 1:8.6.12-4.fc38 fedora 169 k tk x86_64 1:8.6.12-4.fc38 fedora 1.6 M tk-devel x86_64 1:8.6.12-4.fc38 fedora 538 k tre x86_64 0.8.0-39.20140228gitc2f5d13.fc38 fedora 43 k tre-common noarch 0.8.0-39.20140228gitc2f5d13.fc38 fedora 31 k tre-devel x86_64 0.8.0-39.20140228gitc2f5d13.fc38 fedora 12 k ttmkfdir x86_64 3.0.9-67.fc38 fedora 54 k tzdata-java noarch 2024a-1.fc38 updates 207 k xdg-utils noarch 1.1.3-15.fc38 updates 77 k xml-common noarch 0.6.3-60.fc38 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-35.fc38 fedora 505 k xorg-x11-proto-devel noarch 2022.2-3.fc38 fedora 299 k xz-devel x86_64 5.4.1-1.fc38 fedora 65 k zlib-devel x86_64 1.2.13-3.fc38 fedora 45 k Transaction Summary ======================================================================================== Install 171 Packages Total size: 290 M Total download size: 7.8 M Installed size: 897 M Downloading Packages: [SKIPPED] R-CRAN-MASS-7.3.60.0.1-1.fc38.copr6895092.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-Matrix-1.6.5-1.fc38.copr6886765.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-Rcpp-1.0.12-1.fc38.copr6877523.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-boot-1.3.30-1.fc38.copr7307080.noarch.rpm: Already downloaded [SKIPPED] R-CRAN-cachem-1.0.8-1.fc38.copr5865786.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-fastmap-1.1.1-1.fc38.copr5813019.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-lattice-0.22.6-1.fc38.copr7307082.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-memoise-2.0.1-1.fc38.copr5817811.noarch.rpm: Already downloaded [SKIPPED] R-CRAN-mgcv-1.9.1-1.fc38.copr6775870.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-nlme-3.1.164-1.fc38.copr6700968.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-rlang-1.1.3-1.fc38.copr6880930.x86_64.rpm: Already downloaded [SKIPPED] R-rpm-macros-1.2.1-6.fc38.noarch.rpm: Already downloaded [SKIPPED] brotli-1.0.9-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] brotli-devel-1.0.9-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] bzip2-devel-1.0.8-13.fc38.x86_64.rpm: Already downloaded [SKIPPED] copy-jdk-configs-4.1-2.fc38.noarch.rpm: Already downloaded [SKIPPED] crypto-policies-scripts-20230301-1.gita12f7b2.fc38.noarch.rpm: Already downloaded [SKIPPED] desktop-file-utils-0.26-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] fonts-filesystem-2.0.5-11.fc38.noarch.rpm: Already downloaded [SKIPPED] freetype-2.13.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] freetype-devel-2.13.0-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] fribidi-1.0.12-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] gc-8.2.2-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] gettext-0.21.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] gettext-envsubst-0.21.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] gettext-libs-0.21.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] gettext-runtime-0.21.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] graphite2-devel-1.3.14-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] guile22-2.2.7-7.fc38.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-7.1.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-devel-7.1.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-icu-7.1.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] javapackages-filesystem-6.1.0-7.fc38.noarch.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-25.fc38.x86_64.rpm: Already downloaded [SKIPPED] libICE-1.0.10-10.fc38.x86_64.rpm: Already downloaded [SKIPPED] libSM-1.2.3-12.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXau-1.0.11-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXau-devel-1.0.11-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXcomposite-0.4.5-9.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXext-1.3.5-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXmu-1.1.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXrender-0.9.11-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXrender-devel-0.9.11-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXt-1.2.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libXtst-1.2.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libb2-0.98.1-8.fc38.x86_64.rpm: Already downloaded [SKIPPED] libblkid-devel-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libdatrie-0.2.13-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] libffi-devel-3.4.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libfontenc-1.1.6-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libicu-72.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libicu-devel-72.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libjpeg-turbo-2.1.4-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] liblerc-4.0.0-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] libmount-devel-2.38.1-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libmpc-1.3.1-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpng-1.6.37-14.fc38.x86_64.rpm: Already downloaded [SKIPPED] libpng-devel-1.6.37-14.fc38.x86_64.rpm: Already downloaded [SKIPPED] libselinux-devel-3.5-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libsepol-devel-3.5-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] libthai-0.1.29-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.7-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] libxcb-1.13.1-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] libxcb-devel-1.13.1-11.fc38.x86_64.rpm: Already downloaded [SKIPPED] lksctp-tools-1.0.19-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] lua-5.4.4-9.fc38.x86_64.rpm: Already downloaded [SKIPPED] lua-posix-35.1-5.fc38.x86_64.rpm: Already downloaded [SKIPPED] mkfontscale-1.2.2-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] mpdecimal-2.5.1-6.fc38.x86_64.rpm: Already downloaded [SKIPPED] nettle-3.8-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] openblas-0.3.21-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] openblas-openmp-0.3.21-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] openblas-openmp64-0.3.21-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] pango-1.50.14-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] pcre2-devel-10.42-1.fc38.1.x86_64.rpm: Already downloaded [SKIPPED] pcre2-utf16-10.42-1.fc38.1.x86_64.rpm: Already downloaded [SKIPPED] pcre2-utf32-10.42-1.fc38.1.x86_64.rpm: Already downloaded [SKIPPED] pixman-0.42.2-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] python-setuptools-wheel-65.5.1-2.fc38.noarch.rpm: Already downloaded [SKIPPED] sysprof-capture-devel-3.48.0-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] tcl-8.6.12-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] tcl-devel-8.6.12-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] tk-8.6.12-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] tk-devel-8.6.12-4.fc38.x86_64.rpm: Already downloaded [SKIPPED] tre-0.8.0-39.20140228gitc2f5d13.fc38.x86_64.rpm: Already downloaded [SKIPPED] tre-common-0.8.0-39.20140228gitc2f5d13.fc38.noarch.rpm: Already downloaded [SKIPPED] tre-devel-0.8.0-39.20140228gitc2f5d13.fc38.x86_64.rpm: Already downloaded [SKIPPED] ttmkfdir-3.0.9-67.fc38.x86_64.rpm: Already downloaded [SKIPPED] xml-common-0.6.3-60.fc38.noarch.rpm: Already downloaded [SKIPPED] xorg-x11-fonts-Type1-7.5-35.fc38.noarch.rpm: Already downloaded [SKIPPED] xorg-x11-proto-devel-2022.2-3.fc38.noarch.rpm: Already downloaded [SKIPPED] xz-devel-5.4.1-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] zlib-devel-1.2.13-3.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-core-4.3.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-core-devel-4.3.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-devel-4.3.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-java-4.3.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-java-devel-4.3.3-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] R-littler-0.3.19-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] alsa-lib-1.2.11-2.fc38.x86_64.rpm: Already downloaded [SKIPPED] annobin-docs-12.40-1.fc38.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.40-1.fc38.x86_64.rpm: Already downloaded [SKIPPED] 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R-CRAN-rlang-1.1.3-1.fc38.copr6880930.x86_64 17/171 Verifying : R-rpm-macros-1.2.1-6.fc38.noarch 18/171 Verifying : brotli-1.0.9-11.fc38.x86_64 19/171 Verifying : brotli-devel-1.0.9-11.fc38.x86_64 20/171 Verifying : bzip2-devel-1.0.8-13.fc38.x86_64 21/171 Verifying : copy-jdk-configs-4.1-2.fc38.noarch 22/171 Verifying : crypto-policies-scripts-20230301-1.gita12f7b2.fc 23/171 Verifying : desktop-file-utils-0.26-8.fc38.x86_64 24/171 Verifying : fonts-filesystem-1:2.0.5-11.fc38.noarch 25/171 Verifying : freetype-2.13.0-2.fc38.x86_64 26/171 Verifying : freetype-devel-2.13.0-2.fc38.x86_64 27/171 Verifying : fribidi-1.0.12-3.fc38.x86_64 28/171 Verifying : gc-8.2.2-3.fc38.x86_64 29/171 Verifying : gettext-0.21.1-2.fc38.x86_64 30/171 Verifying : gettext-envsubst-0.21.1-2.fc38.x86_64 31/171 Verifying : gettext-libs-0.21.1-2.fc38.x86_64 32/171 Verifying : gettext-runtime-0.21.1-2.fc38.x86_64 33/171 Verifying : graphite2-1.3.14-11.fc38.x86_64 34/171 Verifying : graphite2-devel-1.3.14-11.fc38.x86_64 35/171 Verifying : guile22-2.2.7-7.fc38.x86_64 36/171 Verifying : harfbuzz-7.1.0-1.fc38.x86_64 37/171 Verifying : harfbuzz-devel-7.1.0-1.fc38.x86_64 38/171 Verifying : harfbuzz-icu-7.1.0-1.fc38.x86_64 39/171 Verifying : javapackages-filesystem-6.1.0-7.fc38.noarch 40/171 Verifying : jbigkit-libs-2.1-25.fc38.x86_64 41/171 Verifying : libICE-1.0.10-10.fc38.x86_64 42/171 Verifying : libSM-1.2.3-12.fc38.x86_64 43/171 Verifying : libXau-1.0.11-2.fc38.x86_64 44/171 Verifying : libXau-devel-1.0.11-2.fc38.x86_64 45/171 Verifying : libXcomposite-0.4.5-9.fc38.x86_64 46/171 Verifying : libXext-1.3.5-2.fc38.x86_64 47/171 Verifying : libXmu-1.1.4-2.fc38.x86_64 48/171 Verifying : libXrender-0.9.11-2.fc38.x86_64 49/171 Verifying : libXrender-devel-0.9.11-2.fc38.x86_64 50/171 Verifying : libXt-1.2.1-4.fc38.x86_64 51/171 Verifying : libXtst-1.2.4-2.fc38.x86_64 52/171 Verifying : libb2-0.98.1-8.fc38.x86_64 53/171 Verifying : libblkid-devel-2.38.1-4.fc38.x86_64 54/171 Verifying : libdatrie-0.2.13-5.fc38.x86_64 55/171 Verifying : libffi-devel-3.4.4-2.fc38.x86_64 56/171 Verifying : libfontenc-1.1.6-2.fc38.x86_64 57/171 Verifying : libicu-72.1-2.fc38.x86_64 58/171 Verifying : libicu-devel-72.1-2.fc38.x86_64 59/171 Verifying : libjpeg-turbo-2.1.4-2.fc38.x86_64 60/171 Verifying : liblerc-4.0.0-3.fc38.x86_64 61/171 Verifying : libmount-devel-2.38.1-4.fc38.x86_64 62/171 Verifying : libmpc-1.3.1-2.fc38.x86_64 63/171 Verifying : libpng-2:1.6.37-14.fc38.x86_64 64/171 Verifying : libpng-devel-2:1.6.37-14.fc38.x86_64 65/171 Verifying : libselinux-devel-3.5-1.fc38.x86_64 66/171 Verifying : libsepol-devel-3.5-1.fc38.x86_64 67/171 Verifying : libthai-0.1.29-4.fc38.x86_64 68/171 Verifying : libtool-ltdl-2.4.7-6.fc38.x86_64 69/171 Verifying : libxcb-1.13.1-11.fc38.x86_64 70/171 Verifying : libxcb-devel-1.13.1-11.fc38.x86_64 71/171 Verifying : lksctp-tools-1.0.19-3.fc38.x86_64 72/171 Verifying : lua-5.4.4-9.fc38.x86_64 73/171 Verifying : lua-posix-35.1-5.fc38.x86_64 74/171 Verifying : mkfontscale-1.2.2-3.fc38.x86_64 75/171 Verifying : mpdecimal-2.5.1-6.fc38.x86_64 76/171 Verifying : nettle-3.8-3.fc38.x86_64 77/171 Verifying : openblas-0.3.21-4.fc38.x86_64 78/171 Verifying : openblas-openmp-0.3.21-4.fc38.x86_64 79/171 Verifying : openblas-openmp64-0.3.21-4.fc38.x86_64 80/171 Verifying : pango-1.50.14-1.fc38.x86_64 81/171 Verifying : pcre2-devel-10.42-1.fc38.1.x86_64 82/171 Verifying : pcre2-utf16-10.42-1.fc38.1.x86_64 83/171 Verifying : pcre2-utf32-10.42-1.fc38.1.x86_64 84/171 Verifying : pixman-0.42.2-1.fc38.x86_64 85/171 Verifying : python-setuptools-wheel-65.5.1-2.fc38.noarch 86/171 Verifying : sysprof-capture-devel-3.48.0-1.fc38.x86_64 87/171 Verifying : tcl-1:8.6.12-4.fc38.x86_64 88/171 Verifying : tcl-devel-1:8.6.12-4.fc38.x86_64 89/171 Verifying : tk-1:8.6.12-4.fc38.x86_64 90/171 Verifying : tk-devel-1:8.6.12-4.fc38.x86_64 91/171 Verifying : tre-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 92/171 Verifying : tre-common-0.8.0-39.20140228gitc2f5d13.fc38.noar 93/171 Verifying : tre-devel-0.8.0-39.20140228gitc2f5d13.fc38.x86_6 94/171 Verifying : ttmkfdir-3.0.9-67.fc38.x86_64 95/171 Verifying : xml-common-0.6.3-60.fc38.noarch 96/171 Verifying : xorg-x11-fonts-Type1-7.5-35.fc38.noarch 97/171 Verifying : xorg-x11-proto-devel-2022.2-3.fc38.noarch 98/171 Verifying : xz-devel-5.4.1-1.fc38.x86_64 99/171 Verifying : zlib-devel-1.2.13-3.fc38.x86_64 100/171 Verifying : R-core-4.3.3-1.fc38.x86_64 101/171 Verifying : R-core-devel-4.3.3-1.fc38.x86_64 102/171 Verifying : R-devel-4.3.3-1.fc38.x86_64 103/171 Verifying : R-java-4.3.3-1.fc38.x86_64 104/171 Verifying : R-java-devel-4.3.3-1.fc38.x86_64 105/171 Verifying : R-littler-0.3.19-1.fc38.x86_64 106/171 Verifying : alsa-lib-1.2.11-2.fc38.x86_64 107/171 Verifying : annobin-docs-12.40-1.fc38.noarch 108/171 Verifying : annobin-plugin-gcc-12.40-1.fc38.x86_64 109/171 Verifying : avahi-libs-0.8-22.fc38.x86_64 110/171 Verifying : cairo-1.17.8-4.fc38.x86_64 111/171 Verifying : cmake-filesystem-3.27.7-1.fc38.x86_64 112/171 Verifying : cpp-13.2.1-7.fc38.x86_64 113/171 Verifying : cups-libs-1:2.4.7-11.fc38.x86_64 114/171 Verifying : dbus-libs-1:1.14.10-1.fc38.x86_64 115/171 Verifying : emacs-filesystem-1:29.3-1.fc38.noarch 116/171 Verifying : expat-2.6.0-1.fc38.x86_64 117/171 Verifying : flexiblas-3.4.2-1.fc38.x86_64 118/171 Verifying : flexiblas-devel-3.4.2-1.fc38.x86_64 119/171 Verifying : flexiblas-netlib-3.4.2-1.fc38.x86_64 120/171 Verifying : flexiblas-netlib64-3.4.2-1.fc38.x86_64 121/171 Verifying : flexiblas-openblas-openmp-3.4.2-1.fc38.x86_64 122/171 Verifying : flexiblas-openblas-openmp64-3.4.2-1.fc38.x86_64 123/171 Verifying : fontconfig-2.14.2-2.fc38.x86_64 124/171 Verifying : fontconfig-devel-2.14.2-2.fc38.x86_64 125/171 Verifying : gcc-13.2.1-7.fc38.x86_64 126/171 Verifying : gcc-c++-13.2.1-7.fc38.x86_64 127/171 Verifying : gcc-gfortran-13.2.1-7.fc38.x86_64 128/171 Verifying : gcc-plugin-annobin-13.2.1-7.fc38.x86_64 129/171 Verifying : glib2-2.76.6-1.fc38.x86_64 130/171 Verifying : glib2-devel-2.76.6-1.fc38.x86_64 131/171 Verifying : glibc-devel-2.37-18.fc38.x86_64 132/171 Verifying : glibc-headers-x86-2.37-18.fc38.noarch 133/171 Verifying : gnutls-3.8.4-1.fc38.x86_64 134/171 Verifying : google-noto-fonts-common-20230201-2.fc38.noarch 135/171 Verifying : google-noto-sans-vf-fonts-20230201-2.fc38.noarch 136/171 Verifying : java-17-openjdk-1:17.0.9.0.9-3.fc38.x86_64 137/171 Verifying : java-17-openjdk-devel-1:17.0.9.0.9-3.fc38.x86_64 138/171 Verifying : java-17-openjdk-headless-1:17.0.9.0.9-3.fc38.x86 139/171 Verifying : kernel-headers-6.8.3-100.fc38.x86_64 140/171 Verifying : langpacks-core-font-en-3.0-32.fc38.noarch 141/171 Verifying : libRmath-4.3.3-1.fc38.x86_64 142/171 Verifying : libRmath-devel-4.3.3-1.fc38.x86_64 143/171 Verifying : libX11-1.8.7-1.fc38.x86_64 144/171 Verifying : libX11-common-1.8.7-1.fc38.noarch 145/171 Verifying : libX11-devel-1.8.7-1.fc38.x86_64 146/171 Verifying : libX11-xcb-1.8.7-1.fc38.x86_64 147/171 Verifying : libXft-2.3.8-2.fc38.x86_64 148/171 Verifying : libXft-devel-2.3.8-2.fc38.x86_64 149/171 Verifying : libXi-1.8.1-1.fc38.x86_64 150/171 Verifying : libgfortran-13.2.1-7.fc38.x86_64 151/171 Verifying : libquadmath-13.2.1-7.fc38.x86_64 152/171 Verifying : libquadmath-devel-13.2.1-7.fc38.x86_64 153/171 Verifying : libstdc++-devel-13.2.1-7.fc38.x86_64 154/171 Verifying : libtiff-4.4.0-8.fc38.x86_64 155/171 Verifying : libtirpc-devel-1.3.4-1.rc3.fc38.x86_64 156/171 Verifying : libwebp-1.3.2-2.fc38.x86_64 157/171 Verifying : libxcrypt-devel-4.4.36-1.fc38.x86_64 158/171 Verifying : libxml2-devel-2.10.4-1.fc38.x86_64 159/171 Verifying : make-1:4.4.1-1.fc38.x86_64 160/171 Verifying : nspr-4.35.0-17.fc38.x86_64 161/171 Verifying : nss-3.99.0-1.fc38.x86_64 162/171 Verifying : nss-softokn-3.99.0-1.fc38.x86_64 163/171 Verifying : nss-softokn-freebl-3.99.0-1.fc38.x86_64 164/171 Verifying : nss-sysinit-3.99.0-1.fc38.x86_64 165/171 Verifying : nss-util-3.99.0-1.fc38.x86_64 166/171 Verifying : python-pip-wheel-22.3.1-3.fc38.noarch 167/171 Verifying : python3-3.11.8-2.fc38.x86_64 168/171 Verifying : python3-libs-3.11.8-2.fc38.x86_64 169/171 Verifying : tzdata-java-2024a-1.fc38.noarch 170/171 Verifying : xdg-utils-1.1.3-15.fc38.noarch 171/171 Installed products updated. Installed: R-CRAN-MASS-7.3.60.0.1-1.fc38.copr6895092.x86_64 R-CRAN-Matrix-1.6.5-1.fc38.copr6886765.x86_64 R-CRAN-Rcpp-1.0.12-1.fc38.copr6877523.x86_64 R-CRAN-RcppEigen-0.3.4.0.0-1.fc38.copr7306782.x86_64 R-CRAN-Rdpack-2.6-1.fc38.copr6614541.noarch R-CRAN-boot-1.3.30-1.fc38.copr7307080.noarch R-CRAN-cachem-1.0.8-1.fc38.copr5865786.x86_64 R-CRAN-fastmap-1.1.1-1.fc38.copr5813019.x86_64 R-CRAN-lattice-0.22.6-1.fc38.copr7307082.x86_64 R-CRAN-lme4-1.1.35.2-1.fc38.copr7307303.x86_64 R-CRAN-memoise-2.0.1-1.fc38.copr5817811.noarch R-CRAN-mgcv-1.9.1-1.fc38.copr6775870.x86_64 R-CRAN-minqa-1.2.6-1.fc38.copr6395773.x86_64 R-CRAN-nlme-3.1.164-1.fc38.copr6700968.x86_64 R-CRAN-nloptr-2.0.3-1.fc38.copr5831161.x86_64 R-CRAN-rbibutils-2.2.16-1.fc38.copr6566059.x86_64 R-CRAN-rlang-1.1.3-1.fc38.copr6880930.x86_64 R-core-4.3.3-1.fc38.x86_64 R-core-devel-4.3.3-1.fc38.x86_64 R-devel-4.3.3-1.fc38.x86_64 R-java-4.3.3-1.fc38.x86_64 R-java-devel-4.3.3-1.fc38.x86_64 R-littler-0.3.19-1.fc38.x86_64 R-rpm-macros-1.2.1-6.fc38.noarch alsa-lib-1.2.11-2.fc38.x86_64 annobin-docs-12.40-1.fc38.noarch annobin-plugin-gcc-12.40-1.fc38.x86_64 avahi-libs-0.8-22.fc38.x86_64 brotli-1.0.9-11.fc38.x86_64 brotli-devel-1.0.9-11.fc38.x86_64 bzip2-devel-1.0.8-13.fc38.x86_64 cairo-1.17.8-4.fc38.x86_64 cmake-filesystem-3.27.7-1.fc38.x86_64 copy-jdk-configs-4.1-2.fc38.noarch cpp-13.2.1-7.fc38.x86_64 crypto-policies-scripts-20230301-1.gita12f7b2.fc38.noarch cups-libs-1:2.4.7-11.fc38.x86_64 dbus-libs-1:1.14.10-1.fc38.x86_64 desktop-file-utils-0.26-8.fc38.x86_64 emacs-filesystem-1:29.3-1.fc38.noarch expat-2.6.0-1.fc38.x86_64 flexiblas-3.4.2-1.fc38.x86_64 flexiblas-devel-3.4.2-1.fc38.x86_64 flexiblas-netlib-3.4.2-1.fc38.x86_64 flexiblas-netlib64-3.4.2-1.fc38.x86_64 flexiblas-openblas-openmp-3.4.2-1.fc38.x86_64 flexiblas-openblas-openmp64-3.4.2-1.fc38.x86_64 fontconfig-2.14.2-2.fc38.x86_64 fontconfig-devel-2.14.2-2.fc38.x86_64 fonts-filesystem-1:2.0.5-11.fc38.noarch freetype-2.13.0-2.fc38.x86_64 freetype-devel-2.13.0-2.fc38.x86_64 fribidi-1.0.12-3.fc38.x86_64 gc-8.2.2-3.fc38.x86_64 gcc-13.2.1-7.fc38.x86_64 gcc-c++-13.2.1-7.fc38.x86_64 gcc-gfortran-13.2.1-7.fc38.x86_64 gcc-plugin-annobin-13.2.1-7.fc38.x86_64 gettext-0.21.1-2.fc38.x86_64 gettext-envsubst-0.21.1-2.fc38.x86_64 gettext-libs-0.21.1-2.fc38.x86_64 gettext-runtime-0.21.1-2.fc38.x86_64 glib2-2.76.6-1.fc38.x86_64 glib2-devel-2.76.6-1.fc38.x86_64 glibc-devel-2.37-18.fc38.x86_64 glibc-headers-x86-2.37-18.fc38.noarch gnutls-3.8.4-1.fc38.x86_64 google-noto-fonts-common-20230201-2.fc38.noarch google-noto-sans-vf-fonts-20230201-2.fc38.noarch graphite2-1.3.14-11.fc38.x86_64 graphite2-devel-1.3.14-11.fc38.x86_64 guile22-2.2.7-7.fc38.x86_64 harfbuzz-7.1.0-1.fc38.x86_64 harfbuzz-devel-7.1.0-1.fc38.x86_64 harfbuzz-icu-7.1.0-1.fc38.x86_64 java-17-openjdk-1:17.0.9.0.9-3.fc38.x86_64 java-17-openjdk-devel-1:17.0.9.0.9-3.fc38.x86_64 java-17-openjdk-headless-1:17.0.9.0.9-3.fc38.x86_64 javapackages-filesystem-6.1.0-7.fc38.noarch jbigkit-libs-2.1-25.fc38.x86_64 kernel-headers-6.8.3-100.fc38.x86_64 langpacks-core-font-en-3.0-32.fc38.noarch libICE-1.0.10-10.fc38.x86_64 libRmath-4.3.3-1.fc38.x86_64 libRmath-devel-4.3.3-1.fc38.x86_64 libSM-1.2.3-12.fc38.x86_64 libX11-1.8.7-1.fc38.x86_64 libX11-common-1.8.7-1.fc38.noarch libX11-devel-1.8.7-1.fc38.x86_64 libX11-xcb-1.8.7-1.fc38.x86_64 libXau-1.0.11-2.fc38.x86_64 libXau-devel-1.0.11-2.fc38.x86_64 libXcomposite-0.4.5-9.fc38.x86_64 libXext-1.3.5-2.fc38.x86_64 libXft-2.3.8-2.fc38.x86_64 libXft-devel-2.3.8-2.fc38.x86_64 libXi-1.8.1-1.fc38.x86_64 libXmu-1.1.4-2.fc38.x86_64 libXrender-0.9.11-2.fc38.x86_64 libXrender-devel-0.9.11-2.fc38.x86_64 libXt-1.2.1-4.fc38.x86_64 libXtst-1.2.4-2.fc38.x86_64 libb2-0.98.1-8.fc38.x86_64 libblkid-devel-2.38.1-4.fc38.x86_64 libdatrie-0.2.13-5.fc38.x86_64 libffi-devel-3.4.4-2.fc38.x86_64 libfontenc-1.1.6-2.fc38.x86_64 libgfortran-13.2.1-7.fc38.x86_64 libicu-72.1-2.fc38.x86_64 libicu-devel-72.1-2.fc38.x86_64 libjpeg-turbo-2.1.4-2.fc38.x86_64 liblerc-4.0.0-3.fc38.x86_64 libmount-devel-2.38.1-4.fc38.x86_64 libmpc-1.3.1-2.fc38.x86_64 libpng-2:1.6.37-14.fc38.x86_64 libpng-devel-2:1.6.37-14.fc38.x86_64 libquadmath-13.2.1-7.fc38.x86_64 libquadmath-devel-13.2.1-7.fc38.x86_64 libselinux-devel-3.5-1.fc38.x86_64 libsepol-devel-3.5-1.fc38.x86_64 libstdc++-devel-13.2.1-7.fc38.x86_64 libthai-0.1.29-4.fc38.x86_64 libtiff-4.4.0-8.fc38.x86_64 libtirpc-devel-1.3.4-1.rc3.fc38.x86_64 libtool-ltdl-2.4.7-6.fc38.x86_64 libwebp-1.3.2-2.fc38.x86_64 libxcb-1.13.1-11.fc38.x86_64 libxcb-devel-1.13.1-11.fc38.x86_64 libxcrypt-devel-4.4.36-1.fc38.x86_64 libxml2-devel-2.10.4-1.fc38.x86_64 lksctp-tools-1.0.19-3.fc38.x86_64 lua-5.4.4-9.fc38.x86_64 lua-posix-35.1-5.fc38.x86_64 make-1:4.4.1-1.fc38.x86_64 mkfontscale-1.2.2-3.fc38.x86_64 mpdecimal-2.5.1-6.fc38.x86_64 nettle-3.8-3.fc38.x86_64 nspr-4.35.0-17.fc38.x86_64 nss-3.99.0-1.fc38.x86_64 nss-softokn-3.99.0-1.fc38.x86_64 nss-softokn-freebl-3.99.0-1.fc38.x86_64 nss-sysinit-3.99.0-1.fc38.x86_64 nss-util-3.99.0-1.fc38.x86_64 openblas-0.3.21-4.fc38.x86_64 openblas-openmp-0.3.21-4.fc38.x86_64 openblas-openmp64-0.3.21-4.fc38.x86_64 pango-1.50.14-1.fc38.x86_64 pcre2-devel-10.42-1.fc38.1.x86_64 pcre2-utf16-10.42-1.fc38.1.x86_64 pcre2-utf32-10.42-1.fc38.1.x86_64 pixman-0.42.2-1.fc38.x86_64 python-pip-wheel-22.3.1-3.fc38.noarch python-setuptools-wheel-65.5.1-2.fc38.noarch python3-3.11.8-2.fc38.x86_64 python3-libs-3.11.8-2.fc38.x86_64 sysprof-capture-devel-3.48.0-1.fc38.x86_64 tcl-1:8.6.12-4.fc38.x86_64 tcl-devel-1:8.6.12-4.fc38.x86_64 tk-1:8.6.12-4.fc38.x86_64 tk-devel-1:8.6.12-4.fc38.x86_64 tre-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 tre-common-0.8.0-39.20140228gitc2f5d13.fc38.noarch tre-devel-0.8.0-39.20140228gitc2f5d13.fc38.x86_64 ttmkfdir-3.0.9-67.fc38.x86_64 tzdata-java-2024a-1.fc38.noarch xdg-utils-1.1.3-15.fc38.noarch xml-common-0.6.3-60.fc38.noarch xorg-x11-fonts-Type1-7.5-35.fc38.noarch xorg-x11-proto-devel-2022.2-3.fc38.noarch xz-devel-5.4.1-1.fc38.x86_64 zlib-devel-1.2.13-3.fc38.x86_64 Complete! Finish: build setup for R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm Start: rpmbuild R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.XqhHuy + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf galamm + /usr/bin/mkdir -p galamm + cd galamm + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/galamm_0.2.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d galamm/src ']' + find galamm/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d galamm/src ']' + find galamm/src/Makevars galamm/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.P5gJzo + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd galamm + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Yqx5fr + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd galamm + mkdir -p /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64/usr/local/lib/R/library galamm * installing *source* package 'galamm' ... ** package 'galamm' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (GCC) 13.2.1 20240316 (Red Hat 13.2.1-7)' using C++17 g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from 'struct Eigen::internal::traits > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from 'class Eigen::Map >' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter > >' RcppExports.cpp:20:85: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from 'class Eigen::Map >' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter > >' RcppExports.cpp:20:85: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter > >' RcppExports.cpp:20:85: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from 'class Eigen::Map >' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter > >' RcppExports.cpp:22:85: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter > >' RcppExports.cpp:22:85: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from 'class Eigen::MappedSparseMatrix' /usr/local/lib/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11: required from 'class Rcpp::ConstInputParameter >' RcppExports.cpp:23:93: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c compute_galamm.cpp -o compute_galamm.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:205, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from data.h:4, from compute_galamm.cpp:2: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:174: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:165: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:271: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from ../inst/include/autodiff/forward/utils/gradient.hpp:35, from ../inst/include/autodiff/forward/dual/eigen.hpp:37, from data.h:6: ../inst/include/autodiff/common/classtraits.hpp:56:39: warning: unnecessary parentheses in declaration of 'f' [-Wparentheses] 56 | template static char ((&f(decltype(&C::value))))[1]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ ../inst/include/autodiff/common/classtraits.hpp:56:39: note: remove parentheses 56 | template static char ((&f(decltype(&C::value))))[1]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ | - - ../inst/include/autodiff/common/classtraits.hpp:57:39: warning: unnecessary parentheses in declaration of 'f' [-Wparentheses] 57 | template static char ((&f(...)))[2]; | ^~~~~~~~~ ../inst/include/autodiff/common/classtraits.hpp:57:39: note: remove parentheses 57 | template static char ((&f(...)))[2]; | ^~~~~~~~~ | - - /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' data.h:16:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' data.h:16:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' data.h:16:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' compute_galamm.cpp:443:1: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' compute_galamm.cpp:443:1: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from 'class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from 'class Eigen::MappedSparseMatrix' compute_galamm.cpp:443:1: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:282:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here compute_galamm.cpp:97:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > >, std::allocator, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 97 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ compute_galamm.cpp:116:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > >, std::allocator, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 116 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, autodiff::detail::Dual >, double>, const Eigen::ArrayWrapper, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, autodiff::detail::Dual >, double>, const Eigen::ArrayWrapper, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, autodiff::detail::Dual >, double>, const Eigen::ArrayWrapper, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' compute_galamm.cpp:122:70: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' compute_galamm.cpp:122:74: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, autodiff::detail::Dual > >, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, autodiff::detail::Dual > >, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, autodiff::detail::Dual > >, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >' compute_galamm.cpp:127:25: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here compute_galamm.cpp:130:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > >, std::allocator, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 130 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from 'struct Eigen::internal::cast_return_type, autodiff::detail::Dual >, -1, 1, 0, -1, 1>, const Eigen::CwiseUnaryOp, autodiff::detail::Dual >, double>, const Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::DenseBase, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >::CastXpr' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::DenseBase, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >::CastXpr::Type Eigen::DenseBase, autodiff::detail::Dual >, -1, 1, 0, -1, 1> >::cast() const [with NewType = double]' misc.h:191:54: required from 'Rcpp::List create_result(Functor1, Functor2, parameters, autodiff::detail::Dual > >&, bool) [with Functor1 = wrapper, autodiff::detail::Dual > >(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool)::, autodiff::detail::Dual > >&)>; Functor2 = wrapper, autodiff::detail::Dual > >(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool)::, autodiff::detail::Dual > >&)>; Rcpp::List = Rcpp::Vector<19>]' compute_galamm.cpp:312:23: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:452:28: required from here compute_galamm.cpp:97:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >, std::default_delete > > >, std::allocator >, std::default_delete > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 97 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ compute_galamm.cpp:116:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >, std::default_delete > > >, std::allocator >, std::default_delete > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 116 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ compute_galamm.cpp:130:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >, std::default_delete > > >, std::allocator >, std::default_delete > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 130 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from 'struct Eigen::internal::cast_return_type, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::DenseBase >::CastXpr' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::DenseBase >::CastXpr::Type Eigen::DenseBase >::cast() const [with NewType = double]' data.h:17:16: required from 'data::data(Eigen::VectorXd, Eigen::VectorXd, Eigen::MatrixXd, Eigen::SparseMatrix) [with T = double; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix]' compute_galamm.cpp:278:11: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from 'struct Eigen::internal::cast_return_type, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::DenseBase >::CastXpr' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::DenseBase >::CastXpr::Type Eigen::DenseBase >::cast() const [with NewType = double]' data.h:17:64: required from 'data::data(Eigen::VectorXd, Eigen::VectorXd, Eigen::MatrixXd, Eigen::SparseMatrix) [with T = double; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix]' compute_galamm.cpp:278:11: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, const Eigen::SparseMatrix > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::SparseMatrix, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::SparseMatrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from 'struct Eigen::internal::cast_return_type, const Eigen::CwiseUnaryOp, const Eigen::SparseMatrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::SparseMatrixBase >::CastXpr' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::SparseMatrixBase >::CastXpr::Type Eigen::SparseMatrixBase >::cast() const [with NewType = double]' data.h:18:18: required from 'data::data(Eigen::VectorXd, Eigen::VectorXd, Eigen::MatrixXd, Eigen::SparseMatrix) [with T = double; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix]' compute_galamm.cpp:278:11: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' parameters.h:57:42: required from 'parameters::parameters(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXi&, const int&, const double&, const int&) [with T = double; Eigen::VectorXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:280:17: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here compute_galamm.cpp:97:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, std::default_delete > >, std::allocator, std::default_delete > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 97 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' compute_galamm.cpp:98:77: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:513:38: required from 'struct Eigen::internal::cast_return_type, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from 'struct Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >::CastXpr' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of 'template typename Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >::CastXpr::Type Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >::cast() const [with NewType = double]' compute_galamm.cpp:99:69: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, Eigen::Array > > > >' compute_galamm.cpp:98:80: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here compute_galamm.cpp:116:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, std::default_delete > >, std::allocator, std::default_delete > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 116 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' compute_galamm.cpp:122:70: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >' compute_galamm.cpp:122:87: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Matrix, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > >' compute_galamm.cpp:122:103: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::ArrayWrapper, const Eigen::Matrix, const Eigen::Matrix > > >' compute_galamm.cpp:122:74: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, Eigen::SparseMatrix, 2> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7: required from 'class Eigen::ProductImpl, Eigen::SparseMatrix, 2, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::SparseMatrix, 2>' compute_galamm.cpp:123:45: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>' compute_galamm.cpp:123:58: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >' compute_galamm.cpp:123:79: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from 'class Eigen::SolveImpl, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from 'class Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >' compute_galamm.cpp:123:27: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >' compute_galamm.cpp:127:25: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] compute_galamm.cpp: In instantiation of 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]': compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here compute_galamm.cpp:130:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, std::default_delete > >, std::allocator, std::default_delete > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 130 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h:27:47: required from 'struct Eigen::internal::unary_evaluator, autodiff::detail::Dual > >, const Eigen::SparseMatrix >, Eigen::internal::IteratorBased, autodiff::detail::Dual, autodiff::detail::Dual > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, autodiff::detail::Dual > >, const Eigen::SparseMatrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::CwiseUnaryOp, autodiff::detail::Dual > >, const Eigen::SparseMatrix >; _Scalar = autodiff::detail::Dual, autodiff::detail::Dual >; int _Options = 0; _StorageIndex = int]' data.h:18:3: required from 'data::data(Eigen::VectorXd, Eigen::VectorXd, Eigen::MatrixXd, Eigen::SparseMatrix) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix]' compute_galamm.cpp:278:11: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from compute_galamm.cpp:6: update_funs.h: In instantiation of 'void update_Zt(SpMdual&, Vdual&, const std::vector >&, const std::vector >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; SpMdual = Eigen::SparseMatrix, autodiff::detail::Dual >, 0, int>; Vdual = Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1>]': compute_galamm.cpp:88:12: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here update_funs.h:117:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::Index' {aka 'long int'} [-Wsign-compare] 117 | for(size_t k{}; k < Zt.outerSize(); ++k){ | ~~^~~~~~~~~~~~~~~~ update_funs.h: In instantiation of 'void update_X(Mdual&, Vdual&, const Eigen::VectorXi&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Mdual = Eigen::Matrix, autodiff::detail::Dual >, -1, -1, 0, -1, -1>; Vdual = Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1>; Eigen::VectorXi = Eigen::Matrix]': compute_galamm.cpp:89:11: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here update_funs.h:64:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long int'} [-Wsign-compare] 64 | for(size_t i{}; i < lambda_mapping_X.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ compute_galamm.cpp: In instantiation of 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Vdual = Eigen::Matrix, autodiff::detail::Dual >, -1, 1, 0, -1, 1>; ldlt = Eigen::SimplicialLDLT, autodiff::detail::Dual >, 0, int>, 1, Eigen::AMDOrdering >]': compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual, autodiff::detail::Dual >]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual, autodiff::detail::Dual >; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:446:28: required from here compute_galamm.cpp:36:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > >, std::allocator, autodiff::detail::Dual > >, std::default_delete, autodiff::detail::Dual > > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 36 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ update_funs.h: In instantiation of 'void update_Zt(SpMdual&, Vdual&, const std::vector >&, const std::vector >&) [with T = autodiff::detail::Dual; SpMdual = Eigen::SparseMatrix, 0, int>; Vdual = Eigen::Matrix, -1, 1, 0, -1, 1>]': compute_galamm.cpp:88:12: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:452:28: required from here update_funs.h:117:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::Index' {aka 'long int'} [-Wsign-compare] 117 | for(size_t k{}; k < Zt.outerSize(); ++k){ | ~~^~~~~~~~~~~~~~~~ update_funs.h: In instantiation of 'void update_X(Mdual&, Vdual&, const Eigen::VectorXi&) [with T = autodiff::detail::Dual; Mdual = Eigen::Matrix, -1, -1, 0, -1, -1>; Vdual = Eigen::Matrix, -1, 1, 0, -1, 1>; Eigen::VectorXi = Eigen::Matrix]': compute_galamm.cpp:89:11: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:452:28: required from here update_funs.h:64:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long int'} [-Wsign-compare] 64 | for(size_t i{}; i < lambda_mapping_X.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ compute_galamm.cpp: In instantiation of 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = autodiff::detail::Dual; Vdual = Eigen::Matrix, -1, 1, 0, -1, 1>; ldlt = Eigen::SimplicialLDLT, 0, int>, 1, Eigen::AMDOrdering >]': compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = autodiff::detail::Dual]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = autodiff::detail::Dual; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:452:28: required from here compute_galamm.cpp:36:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >, std::default_delete > > >, std::allocator >, std::default_delete > > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 36 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ update_funs.h: In instantiation of 'void update_Zt(SpMdual&, Vdual&, const std::vector >&, const std::vector >&) [with T = double; SpMdual = Eigen::SparseMatrix; Vdual = Eigen::Matrix]': compute_galamm.cpp:88:12: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here update_funs.h:117:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::Index' {aka 'long int'} [-Wsign-compare] 117 | for(size_t k{}; k < Zt.outerSize(); ++k){ | ~~^~~~~~~~~~~~~~~~ update_funs.h: In instantiation of 'void update_X(Mdual&, Vdual&, const Eigen::VectorXi&) [with T = double; Mdual = Eigen::Matrix; Vdual = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]': compute_galamm.cpp:89:11: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here update_funs.h:64:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'Eigen::EigenBase >::Index' {aka 'long int'} [-Wsign-compare] 64 | for(size_t i{}; i < lambda_mapping_X.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 0>' misc.h:28:20: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' misc.h:28:57: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >, Eigen::Transpose >, 2> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose >, 2, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose >, 2>' misc.h:28:60: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Transpose >, 2>, Eigen::Matrix, 0>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Transpose >, 2>, Eigen::Matrix, 0, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl >, Eigen::Transpose >, 2>, Eigen::Matrix, 0, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0>' misc.h:29:33: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >' misc.h:28:35: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7: required from 'class Eigen::ProductImpl, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>' misc.h:60:39: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7: required from 'class Eigen::ProductImpl, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>' misc.h:60:43: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:145:7: required from 'class Eigen::ProductImpl, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>' misc.h:61:28: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] compute_galamm.cpp: In instantiation of 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]': compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here compute_galamm.cpp:36:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, std::default_delete > >, std::allocator, std::default_delete > > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 36 | for(int k{}; k < modvec.size(); k++){ | ~~^~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 1>' compute_galamm.cpp:54:21: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' compute_galamm.cpp:60:27: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' compute_galamm.cpp:60:33: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:312:36: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from 'struct Eigen::internal::product_evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>, 8, Eigen::SparseShape, Eigen::SparseShape, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: required from 'struct Eigen::internal::evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from 'struct Eigen::internal::product_evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>, 8, Eigen::SparseShape, Eigen::SparseShape, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: required from 'struct Eigen::internal::evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' compute_galamm.cpp:59:37: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Product, Eigen::Matrix, 1>; U = Eigen::Product, Eigen::Matrix, 1>; bool NeedToTranspose = false; ResScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Product, Eigen::Matrix, 1>; Derived = Eigen::Product, Eigen::Matrix, 1>; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' compute_galamm.cpp:54:30: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:312:36: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from 'struct Eigen::internal::product_evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, 8, Eigen::SparseShape, Eigen::SparseShape, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product&) [with Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:689:15: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from 'struct Eigen::internal::product_evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, 8, Eigen::SparseShape, Eigen::SparseShape, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: required from 'struct Eigen::internal::evaluator, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseUtil.h:121:8: required from 'struct Eigen::internal::plain_object_eval, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:71:53: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product&) [with Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:689:15: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, const Eigen::SparseMatrix, const Eigen::SparseMatrix > >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::SparseMatrix, const Eigen::SparseMatrix, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::SparseMatrix, const Eigen::SparseMatrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:36:14: required from 'void Eigen::internal::ordering_helper_at_plus_a(const MatrixType&, MatrixType&) [with MatrixType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:63:42: required from 'void Eigen::AMDOrdering::operator()(const MatrixType&, PermutationType&) [with MatrixType = Eigen::SparseMatrix; StorageIndex = int; PermutationType = Eigen::PermutationMatrix<-1, -1, int>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:671:15: required from 'void Eigen::SimplicialCholeskyBase::ordering(const MatrixType&, const CholMatrixType*&, CholMatrixType&) [with Derived = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >; MatrixType = Eigen::SparseMatrix; ConstCholMatrixPtr = const Eigen::SparseMatrix*; CholMatrixType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:244:7: required from 'void Eigen::SimplicialCholeskyBase::analyzePattern(const MatrixType&, bool) [with Derived = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >; MatrixType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:483:27: required from 'void Eigen::SimplicialLDLT<_MatrixType, _UpLo, _Ordering>::analyzePattern(const MatrixType&) [with _MatrixType = Eigen::SparseMatrix; int _UpLo = 1; _Ordering = Eigen::AMDOrdering; MatrixType = Eigen::SparseMatrix]' compute_galamm.cpp:107:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper > > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' compute_galamm.cpp:60:39: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:200:20: required from 'static void Eigen::internal::conservative_sparse_sparse_product_selector::run(const Lhs&, const Rhs&, ResultType&) [with Lhs = Eigen::SparseMatrix; Rhs = Eigen::Transpose >; ResultType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:76:107: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dest&, const Lhs&, const Rhs&, Eigen::SparseShape) [with Dest = Eigen::SparseMatrix; Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; int ProductType = 8]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:43:11: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dest&, const Lhs&, const Rhs&) [with Dest = Eigen::SparseMatrix; Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; int ProductType = 8]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product&) [with Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:689:15: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' compute_galamm.cpp:59:37: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from 'struct Eigen::internal::evaluator > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from 'struct Eigen::internal::evaluator >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1181:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:202:9: required from 'static void Eigen::internal::conservative_sparse_sparse_product_selector::run(const Lhs&, const Rhs&, ResultType&) [with Lhs = Eigen::SparseMatrix; Rhs = Eigen::Transpose >; ResultType = Eigen::SparseMatrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:76:107: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product&) [with Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:689:15: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 1>, const Eigen::Product, Eigen::Matrix, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Product, Eigen::Matrix, 1>; U = Eigen::Product, Eigen::Matrix, 1>; bool NeedToTranspose = false; ResScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from 'typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Product, Eigen::Matrix, 1>; Derived = Eigen::Product, Eigen::Matrix, 1>; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]' compute_galamm.cpp:54:30: required from 'T loss(const parameters&, const data&, Vdual&, std::vector > >&, ldlt&, Vdual&) [with T = double; Vdual = Eigen::Matrix; ldlt = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' compute_galamm.cpp:110:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:173:20: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 5> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl, 5, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:187:58: required from 'class Eigen::TriangularView, 5>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:178:26: required from 'void Eigen::SimplicialCholeskyBase::_solve_impl(const Eigen::MatrixBase&, Eigen::MatrixBase&) const [with Rhs = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >; Dest = Eigen::Matrix; Derived = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >; RhsType = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >; Scalar = double; SrcXprType = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DiagonalMatrix.h:278:47: required from 'struct Eigen::internal::traits, const Eigen::Matrix > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/EigenBase.h:42:59: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix > >, Eigen::Matrix, 1>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, const Eigen::Matrix > >, Eigen::Matrix, 1, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, const Eigen::Matrix > >, Eigen::Matrix, 1, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, const Eigen::Matrix > >, Eigen::Matrix, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:181:46: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >, 6> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from 'class Eigen::TriangularViewImpl >, 6, Eigen::Sparse>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:187:58: required from 'class Eigen::TriangularView >, 6>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:184:26: required from 'void Eigen::SimplicialCholeskyBase::_solve_impl(const Eigen::MatrixBase&, Eigen::MatrixBase&) const [with Rhs = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >; Dest = Eigen::Matrix; Derived = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from 'static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SimplicialLDLT, 1, Eigen::AMDOrdering >; RhsType = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix >; Scalar = double; SrcXprType = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix, 2> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Matrix, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCholesky/SimplicialCholesky.h:187:23: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseProduct.h:174:51: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::Product&) [with Lhs = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>; Rhs = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:689:15: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::DiagonalMatrix, 0>, Eigen::Transpose >, 2>, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' misc.h:61:56: required from 'SpMdual inner_hessian(const parameters&, const data&, const Eigen::DiagonalMatrix&) [with T = double; SpMdual = Eigen::SparseMatrix]' compute_galamm.cpp:106:31: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:333: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'class Eigen::internal::gemv_traits': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:87:38: required from 'struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'class Eigen::internal::gemv_traits': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:91:42: required from 'struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of 'class Eigen::internal::gemv_traits': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:95:45: required from 'struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:253:134: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from 'static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from 'static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, Eigen::Matrix, Eigen::DenseShape, Eigen::DenseShape, 7>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro 'PACKET_DECL_COND_PREFIX' 42 | prefix ## name ## Packet | ^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:40: required from 'static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; typename Dest::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from 'class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose, 1, -1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from 'static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 1, -1, false>; U = Eigen::Block, -1, 1, true>; ResScalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 3>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase, 1, 1, false>, 1>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, 1, false, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, 1, false>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, 1, 1, false>, 2>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, 1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, 1, false>, 0>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, 1, false, true>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:277: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from 'struct Eigen::internal::evaluator, 1, -1, false> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from 'struct Eigen::internal::unary_evaluator, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator, 1, -1, false> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from 'struct Eigen::internal::evaluator, 1, -1, false> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::Matrix, 0>, const Eigen::Product >, Eigen::Transpose >, 2>, Eigen::Matrix, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' misc.h:29:43: required from 'Vdual linpred(const parameters&, const data&) [with T = double; Vdual = Eigen::Matrix]' compute_galamm.cpp:92:24: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = swap_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:424:22: required from 'void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, 1, false>; Derived = Eigen::Block, 1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1033:18: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, 1, false> >': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 1, Eigen::AMDOrdering >, Eigen::CwiseBinaryOp, const Eigen::Product, Eigen::SparseMatrix, 2>, Eigen::Matrix, 0>, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' compute_galamm.cpp:123:13: required from 'logLikObject logLik(parameters, data, std::vector > >&) [with T = double]' compute_galamm.cpp:305:22: required from 'Rcpp::List wrapper(const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::MatrixXd&, const Eigen::SparseMatrix&, const Eigen::SparseMatrix&, const Eigen::VectorXd&, const Eigen::VectorXd&, const std::vector&, const Eigen::VectorXd&, const Eigen::VectorXd&, const Eigen::VectorXi&, const Rcpp::ListOf >&, const Rcpp::ListOf >&, const Eigen::VectorXd&, const std::vector&, const std::vector >&, const Eigen::VectorXi&, const Eigen::VectorXd&, const int&, const double&, bool) [with T = double; Rcpp::List = Rcpp::Vector<19>; Eigen::VectorXd = Eigen::Matrix; Eigen::MatrixXd = Eigen::Matrix; Eigen::VectorXi = Eigen::Matrix]' compute_galamm.cpp:458:27: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >' model.h:153:31: required from 'T Poisson::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:151:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >' model.h:69:16: required from 'T Binomial::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:67:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' model.h:69:44: required from 'T Binomial::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:67:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >' model.h:69:47: required from 'T Binomial::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:67:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >' model.h:77:34: required from 'Vdual Binomial::meanfun(Vdual&, Vdual&) [with T = double; Vdual = Eigen::Matrix]' model.h:75:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >' model.h:77:64: required from 'Vdual Binomial::meanfun(Vdual&, Vdual&) [with T = double; Vdual = Eigen::Matrix]' model.h:75:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >' model.h:84:49: required from 'Vdual Binomial::get_V(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:80:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >' model.h:85:29: required from 'Vdual Binomial::get_V(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:80:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >' model.h:84:66: required from 'Vdual Binomial::get_V(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:80:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' model.h:124:44: required from 'Vdual Gaussian::get_V(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:122:12: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1>, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from 'class Eigen::internal::dense_product_base, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1, 7>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from 'class Eigen::ProductImpl, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1>' model.h:131:24: required from 'T Gaussian::get_phi(Vdual&, Vdual&, Vdual&, Ddual&, int) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:128:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::Matrix, 1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::Matrix, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::Matrix, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Product, Eigen::Matrix, 1>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Product, Eigen::Matrix, 1>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' model.h:111:41: required from 'T Gaussian::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:109:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >, 0>': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> > >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1>, Eigen::Dense>' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' model.h:131:52: required from 'T Gaussian::get_phi(Vdual&, Vdual&, Vdual&, Ddual&, int) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:128:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper > > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' model.h:153:37: required from 'T Poisson::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:151:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > > > >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]' model.h:69:68: required from 'T Binomial::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:67:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 1> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 1> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Product, Eigen::Matrix, 1> > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::Matrix, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Product, Eigen::Matrix, 1>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' model.h:111:41: required from 'T Gaussian::cumulant(Vdual&, Vdual&, Ddual&) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:109:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >; Eigen::Index = long int]': /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> > >; Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1> >; typename Eigen::internal::traits::Scalar = double]' /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Product, Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >, 1>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' model.h:131:52: required from 'T Gaussian::get_phi(Vdual&, Vdual&, Vdual&, Ddual&, int) [with T = double; Vdual = Eigen::Matrix; Ddual = Eigen::DiagonalMatrix]' model.h:128:5: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o galamm.so RcppExports.o compute_galamm.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64/usr/local/lib/R/library/00LOCK-galamm/00new/galamm/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'galamm' finding HTML links ... done VarCorr html anova.galamm html coef.galamm html cognition html confint.galamm html deviance.galamm html diet html epilep html extract_optim_parameters.galamm html factor_loadings.galamm html family.galamm html fitted.galamm html fixef html formula.galamm html galamm-package html galamm html galamm_control html hsced html latent_covariates html latent_covariates_long html lifespan html llikAIC html logLik.galamm html mresp html mresp_hsced html nobs.galamm html plot.galamm html plot_smooth.galamm html predict.galamm html print.VarCorr.galamm html print.summary.galamm html ranef.galamm html residuals.galamm html sigma.galamm html sl html summary.galamm html t2l html vcov.galamm html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (galamm) + test -d galamm/src + cd galamm/src + rm -f RcppExports.o compute_galamm.o galamm.so + rm -f /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.2.0-1.fc38.copr7308084 --unique-debug-suffix -0.2.0-1.fc38.copr7308084.x86_64 --unique-debug-src-base R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/galamm find-debuginfo: starting Extracting debug info from 1 files /usr/bin/gdb.minimal DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 304 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 Provides: R-CRAN-galamm = 0.2.0-1.fc38.copr7308084 R-CRAN-galamm(x86-64) = 0.2.0-1.fc38.copr7308084 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-galamm-debugsource-0.2.0-1.fc38.copr7308084.x86_64 Provides: R-CRAN-galamm-debugsource = 0.2.0-1.fc38.copr7308084 R-CRAN-galamm-debugsource(x86-64) = 0.2.0-1.fc38.copr7308084 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-galamm-debuginfo-0.2.0-1.fc38.copr7308084.x86_64 Provides: R-CRAN-galamm-debuginfo = 0.2.0-1.fc38.copr7308084 R-CRAN-galamm-debuginfo(x86-64) = 0.2.0-1.fc38.copr7308084 debuginfo(build-id) = dff667675f1c16912a3406dc022ab737922f7cdc Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-galamm-debugsource(x86-64) = 0.2.0-1.fc38.copr7308084 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-galamm-debugsource-0.2.0-1.fc38.copr7308084.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-galamm-debuginfo-0.2.0-1.fc38.copr7308084.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.B23bPU + umask 022 + cd /builddir/build/BUILD + cd galamm + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.EKAfoz + umask 022 + cd /builddir/build/BUILD + rm -rf galamm galamm.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm Finish: build phase for R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.log /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.librepo.log /var/lib/mock/fedora-38-x86_64-1713089157.707426/root/var/log/dnf.rpm.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-galamm-0.2.0-1.fc38.copr7308084.src.rpm) Config(child) 1 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-galamm-debuginfo", "epoch": null, "version": "0.2.0", "release": "1.fc38.copr7308084", "arch": "x86_64" }, { "name": "R-CRAN-galamm-debugsource", "epoch": null, "version": "0.2.0", "release": "1.fc38.copr7308084", "arch": "x86_64" }, { "name": "R-CRAN-galamm", "epoch": null, "version": "0.2.0", "release": "1.fc38.copr7308084", "arch": "src" }, { "name": "R-CRAN-galamm", "epoch": null, "version": "0.2.0", "release": "1.fc38.copr7308084", "arch": "x86_64" } ] } RPMResults finished