%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  ggscidca
%global packver   0.2.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.2.1
Release:          1%{?dist}%{?buildtag}
Summary:          Plotting Decision Curve Analysis with Coloured Bars

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-CRAN-cmprsk 
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-kernlab 
BuildRequires:    R-CRAN-randomForest 
BuildRequires:    R-CRAN-reshape2 
BuildRequires:    R-CRAN-survival 
Requires:         R-CRAN-cmprsk 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-kernlab 
Requires:         R-CRAN-randomForest 
Requires:         R-CRAN-reshape2 
Requires:         R-CRAN-survival 

%description
Decision curve analysis is a method for evaluating and comparing
prediction models that incorporates clinical consequences, requires only
the data set on which the models are tested, and can be applied to models
that have either continuous or dichotomous results. The 'ggscidca' package
adds coloured bars of discriminant relevance to the traditional decision
curve. Improved practicality and aesthetics. This method was described by
Balachandran VP (2015) <doi:10.1016/S1470-2045(14)71116-7>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}