mri_watershed {freesurfer} | R Documentation |
This function calls mri_watershed
to extract a brain
from an image, usually for skull stripping.
mri_watershed(file, outfile = NULL, retimg = TRUE, opts = "", ...)
file |
(character) input filename |
outfile |
(character) output filename |
retimg |
(logical) return image of class nifti |
opts |
(character) additional options to |
... |
additional arguments passed to |
Character or nifti depending on retimg
## Not run:
if (have_fs()){
mri_watershed("/path/to/T1.nii.gz")
}
## End(Not run)