Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-tiledb.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1682646379.667036/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b747489967d641ef877640df58745058', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1682646379.667036/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-tiledb.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-tiledb.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1682646379.667036/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '858a334937574285a0ecee40c4431cfb', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1682646379.667036/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.g82luszj:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-tiledb.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qN8I0X + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf tiledb + /usr/bin/mkdir -p tiledb + cd tiledb + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/tiledb_0.19.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d tiledb/src ']' + find tiledb/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d tiledb/src ']' + find tiledb/src/Makevars.in tiledb/src/Makevars.ucrt tiledb/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5AsrYe + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd tiledb + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Xvn0um + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd tiledb + mkdir -p /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library tiledb * installing *source* package 'tiledb' ... ** package 'tiledb' successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++17 accepts -g... yes checking for g++ -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... g++ -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether g++ -std=gnu++17 accepts -g... (cached) yes checking for g++ -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether g++ -std=gnu++17 supports C++17 features by default... yes checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows TileDB... yes checking for pkg-config checking TileDB version... >= 2.0.0 checking for pkg-config checking TileDB deprecation silencer... enabled checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for tiledb/tiledb... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: 'g++ (GCC) 13.1.1 20230426 (Red Hat 13.1.1-1)' using C++17 g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c arrowio.cpp -o arrowio.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c batched.cpp -o batched.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c deprecation.cpp -o deprecation.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c durations.cpp -o durations.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c libtiledb.cpp -o libtiledb.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c nullable.cpp -o nullable.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c shmem.cpp -o shmem.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I../inst/include/ -DTILEDB_SILENT_BUILD -I'/usr/local/lib/R/library/Rcpp/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -c utilities.cpp -o utilities.o g++ -std=gnu++17 -shared -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -fpic -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tiledb.so RcppExports.o arrowio.o batched.o deprecation.o durations.o libtiledb.o nullable.o shmem.o utilities.o -ltiledb -L/usr/lib64/R/lib -lR if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ] && [ -f ../inst/tiledb/lib/libtiledb.dylib ] && [ -f tiledb.so ]; then install_name_tool -change libz.1.dylib @rpath/libz.1.dylib ../inst/tiledb/lib/libtiledb.dylib; install_name_tool -add_rpath @loader_path/../tiledb/lib tiledb.so; fi installing to /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library/00LOCK-tiledb/00new/tiledb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'tiledb' finding HTML links ... done array_consolidate html array_vacuum html as.data.frame.tiledb_config html as.vector.tiledb_config html attrs-set-tiledb_array-method html attrs-tiledb_array-ANY-method html attrs-tiledb_array_schema-ANY-method html attrs-tiledb_array_schema-character-method html attrs-tiledb_array_schema-numeric-method html cell_order-tiledb_array_schema-method html completedBatched html config-tiledb_ctx-method html createBatched html datatype-tiledb_attr-method html datatype-tiledb_dim-method html datatype-tiledb_domain-method html datetimes_as_int64-set-tiledb_array-method html datetimes_as_int64-tiledb_array-method html describe html dim.tiledb_array_schema html dim.tiledb_dim html dim.tiledb_domain html dimensions-tiledb_array_schema-method html dimensions-tiledb_domain-method html domain-tiledb_array_schema-method html domain-tiledb_dim-method html extended-set-tiledb_array-method html extended-tiledb_array-method html fetchBatched html filter_list-set-tiledb_attr-method html filter_list-set-tiledb_dim-method html filter_list-tiledb_array_schema-method html filter_list-tiledb_attr-method html filter_list-tiledb_dim-method html fromDataFrame html fromMatrix html fromSparseMatrix html generics html has_attribute html is.anonymous html is.anonymous.tiledb_dim html is.integral-tiledb_domain-method html is.sparse-tiledb_array_schema-method html limitTileDBCores html name-tiledb_attr-method html name-tiledb_dim-method html nfilters-tiledb_filter_list-method html parse_query_condition html print.tiledb_metadata html query_condition-set-tiledb_array-method html query_condition-tiledb_array-method html query_layout-set-tiledb_array-method html query_layout-tiledb_array-method html query_statistics-set-tiledb_array-method html query_statistics-tiledb_array-method html r_to_tiledb_type html raw_dump-tiledb_array_schema-method html raw_dump-tiledb_attr-method html raw_dump-tiledb_domain-method html return.array-set-tiledb_array-method html return.array-tiledb_array-method html return.data.frame-set-tiledb_array-method html return.data.frame-tiledb_array-method html return.matrix-set-tiledb_array-method html return.matrix-tiledb_array-method html return_as-set-tiledb_array-method html return_as-tiledb_array-method html save_allocation_size_preference html save_return_as_preference html schema-character-method html schema-tiledb_array-method html selected_points-set-tiledb_array-method html selected_points-tiledb_array-method html selected_ranges-set-tiledb_array-method html selected_ranges-tiledb_array-method html show-tiledb_array-method html show-tiledb_array_schema-method html show-tiledb_attr-method html show-tiledb_config-method html show-tiledb_dim-method html show-tiledb_domain-method html show-tiledb_filter-method html show-tiledb_filter_list-method html show-tiledb_group-method html statusBatched html strings_as_factors-set-tiledb_array-method html strings_as_factors-tiledb_array-method html sub-tiledb_array-ANY-method html sub-tiledb_config-ANY-method html sub-tiledb_filter_list-ANY-method html subset-tiledb_array-ANY-ANY-ANY-method html subset-tiledb_config-ANY-ANY-ANY-method html tdb_collect-tiledb_array-method html tdb_filter-tiledb_array-method html tdb_select-tiledb_array-method html tile-tiledb_dim-method html tile_order-tiledb_array_schema-method html tiledb-package html tiledb_array-class html tiledb_array html tiledb_array_close html tiledb_array_create html tiledb_array_delete_fragments html tiledb_array_get_non_empty_domain_from_index html tiledb_array_get_non_empty_domain_from_name html tiledb_array_is_heterogeneous html tiledb_array_is_homogeneous html tiledb_array_is_open html tiledb_array_open html tiledb_array_open_at html tiledb_array_schema-class html tiledb_array_schema html tiledb_array_schema_check html tiledb_array_schema_evolution-class html tiledb_array_schema_evolution html tiledb_array_schema_evolution_add_attribute html tiledb_array_schema_evolution_array_evolve html tiledb_array_schema_evolution_drop_attribute html tiledb_array_schema_get_allows_dups html tiledb_array_schema_get_capacity html tiledb_array_schema_set_allows_dups html tiledb_array_schema_set_capacity html tiledb_array_schema_set_coords_filter_list html tiledb_array_schema_set_offsets_filter_list html tiledb_array_schema_set_validity_filter_list html tiledb_arrow_array_ptr html tiledb_attr-class html tiledb_attr html tiledb_attribute_get_cell_size html tiledb_attribute_get_cell_val_num html tiledb_attribute_get_fill_value html tiledb_attribute_get_nullable html tiledb_attribute_is_variable_sized html tiledb_attribute_set_cell_val_num html tiledb_attribute_set_fill_value html tiledb_attribute_set_nullable html tiledb_config-class html tiledb_config html tiledb_config_load html tiledb_config_save html tiledb_config_unset html tiledb_ctx-class html tiledb_ctx html tiledb_ctx_set_default_tags html tiledb_ctx_set_tag html tiledb_ctx_stats html tiledb_datatype_R_type html tiledb_delete_metadata html tiledb_dim-class html tiledb_dim html tiledb_dim_get_cell_val_num html tiledb_domain-class html tiledb_domain html tiledb_domain_get_dimension_from_index html tiledb_domain_get_dimension_from_name html tiledb_domain_has_dimension html tiledb_error_message html tiledb_filestore_buffer_export html tiledb_filestore_buffer_import html tiledb_filestore_schema_create html tiledb_filestore_size html tiledb_filestore_uri_export html tiledb_filestore_uri_import html tiledb_filter-class html tiledb_filter html tiledb_filter_get_option html tiledb_filter_list-class html tiledb_filter_list html tiledb_filter_list_get_max_chunk_size html tiledb_filter_list_set_max_chunk_size html tiledb_filter_set_option html tiledb_filter_type html tiledb_fragment_info-class html tiledb_fragment_info html tiledb_fragment_info_dense html tiledb_fragment_info_dump html tiledb_fragment_info_get_cell_num html tiledb_fragment_info_get_non_empty_domain_index html tiledb_fragment_info_get_non_empty_domain_name html tiledb_fragment_info_get_non_empty_domain_var_index html tiledb_fragment_info_get_non_empty_domain_var_name html tiledb_fragment_info_get_num html tiledb_fragment_info_get_size html tiledb_fragment_info_get_timestamp_range html tiledb_fragment_info_get_to_vacuum_num html tiledb_fragment_info_get_to_vacuum_uri html tiledb_fragment_info_get_unconsolidated_metadata_num html tiledb_fragment_info_get_version html tiledb_fragment_info_has_consolidated_metadata html tiledb_fragment_info_sparse html tiledb_fragment_info_uri html tiledb_get_all_metadata html tiledb_get_context html tiledb_get_metadata html tiledb_get_query_status html tiledb_get_vfs html tiledb_group-class html tiledb_group html tiledb_group_add_member html tiledb_group_close html tiledb_group_create html tiledb_group_delete_metadata html tiledb_group_get_all_metadata html tiledb_group_get_config html tiledb_group_get_metadata html tiledb_group_get_metadata_from_index html tiledb_group_has_metadata html tiledb_group_is_open html tiledb_group_is_relative html tiledb_group_member html tiledb_group_member_count html tiledb_group_member_dump html tiledb_group_metadata_num html tiledb_group_open html tiledb_group_put_metadata html tiledb_group_query_type html tiledb_group_remove_member html tiledb_group_set_config html tiledb_group_uri html tiledb_has_metadata html tiledb_is_supported_fs html tiledb_ndim-tiledb_array_schema-method html tiledb_ndim-tiledb_dim-method html tiledb_ndim-tiledb_domain-method html tiledb_num_metadata html tiledb_object_ls html tiledb_object_mv html tiledb_object_rm html tiledb_object_type html tiledb_object_walk html tiledb_put_metadata html tiledb_query-class html tiledb_query html tiledb_query_add_range html tiledb_query_add_range_with_type html tiledb_query_alloc_buffer_ptr_char html tiledb_query_buffer_alloc_ptr html tiledb_query_condition-class html tiledb_query_condition html tiledb_query_condition_combine html tiledb_query_condition_init html tiledb_query_create_buffer_ptr html tiledb_query_create_buffer_ptr_char html tiledb_query_ctx html tiledb_query_export_buffer html tiledb_query_finalize html tiledb_query_get_buffer_char html tiledb_query_get_buffer_ptr html tiledb_query_get_est_result_size html tiledb_query_get_est_result_size_var html tiledb_query_get_fragment_num html tiledb_query_get_fragment_timestamp_range html tiledb_query_get_fragment_uri html tiledb_query_get_layout html tiledb_query_get_range html tiledb_query_get_range_num html tiledb_query_import_buffer html tiledb_query_result_buffer_elements html tiledb_query_result_buffer_elements_vec html tiledb_query_set_buffer html tiledb_query_set_buffer_ptr html tiledb_query_set_buffer_ptr_char html tiledb_query_set_condition html tiledb_query_set_layout html tiledb_query_set_subarray html tiledb_query_stats html tiledb_query_status html tiledb_query_submit html tiledb_query_submit_async html tiledb_query_type html tiledb_schema_get_dim_attr_status html tiledb_schema_get_names html tiledb_schema_get_types html tiledb_schema_object html tiledb_set_context html tiledb_set_vfs html tiledb_stats_disable html tiledb_stats_dump html tiledb_stats_enable html tiledb_stats_print html tiledb_stats_raw_dump html tiledb_stats_raw_get html tiledb_stats_raw_print html tiledb_stats_reset html tiledb_subarray-class html tiledb_subarray html tiledb_subarray_to_query html tiledb_version html tiledb_vfs-class html tiledb_vfs html tiledb_vfs_close html tiledb_vfs_create_bucket html tiledb_vfs_create_dir html tiledb_vfs_dir_size html tiledb_vfs_empty_bucket html tiledb_vfs_file_size html tiledb_vfs_is_bucket html tiledb_vfs_is_dir html tiledb_vfs_is_empty_bucket html tiledb_vfs_is_file html tiledb_vfs_ls html tiledb_vfs_move_dir html tiledb_vfs_move_file html tiledb_vfs_open html tiledb_vfs_read html tiledb_vfs_remove_bucket html tiledb_vfs_remove_dir html tiledb_vfs_remove_file html tiledb_vfs_sync html tiledb_vfs_touch html tiledb_vfs_write html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tiledb) + test -d tiledb/src + cd tiledb/src + rm -f RcppExports.o arrowio.o batched.o deprecation.o durations.o libtiledb.o nullable.o shmem.o utilities.o tiledb.so + rm -f /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.19.1-1.fc39.copr5857049 --unique-debug-suffix -0.19.1-1.fc39.copr5857049.x86_64 --unique-debug-src-base R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/tiledb extracting debug info from /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64/usr/local/lib/R/library/tiledb/libs/tiledb.so original debug info size: 17676kB, size after compression: 16080kB /usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 857 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/local/lib/R/library/tiledb/config.status from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/local/lib/R/library/tiledb/scripts/legacy_validity_convert.r from /usr/bin/env Rscript to #!/usr/bin/Rscript + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 Provides: R-CRAN-tiledb = 0.19.1-1.fc39.copr5857049 R-CRAN-tiledb(x86-64) = 0.19.1-1.fc39.copr5857049 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/Rscript /usr/bin/bash glibc >= 2.37.9000-8 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtiledb.so.2.14()(64bit) rtld(GNU_HASH) Processing files: R-CRAN-tiledb-debugsource-0.19.1-1.fc39.copr5857049.x86_64 Provides: R-CRAN-tiledb-debugsource = 0.19.1-1.fc39.copr5857049 R-CRAN-tiledb-debugsource(x86-64) = 0.19.1-1.fc39.copr5857049 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-tiledb-debuginfo-0.19.1-1.fc39.copr5857049.x86_64 Provides: R-CRAN-tiledb-debuginfo = 0.19.1-1.fc39.copr5857049 R-CRAN-tiledb-debuginfo(x86-64) = 0.19.1-1.fc39.copr5857049 debuginfo(build-id) = 0e4e6b511223e9d9733692934f8e12e51bac51fc Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-tiledb-debugsource(x86-64) = 0.19.1-1.fc39.copr5857049 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-tiledb-debugsource-0.19.1-1.fc39.copr5857049.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-tiledb-debuginfo-0.19.1-1.fc39.copr5857049.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.2PRWuq + umask 022 + cd /builddir/build/BUILD + cd tiledb + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-tiledb-0.19.1-1.fc39.copr5857049.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.VHJbCE + umask 022 + cd /builddir/build/BUILD + rm -rf tiledb tiledb.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Child return code was: 0