%global __brp_check_rpaths %{nil}
%global packname  clusterhap
%global packver   0.1
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1
Release:          3%{?dist}%{?buildtag}
Summary:          Clustering Genotypes in Haplotypes

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 2.10
Requires:         R-core >= 2.10
BuildArch:        noarch
BuildRequires:    R-graphics 
BuildRequires:    R-utils 
Requires:         R-graphics 
Requires:         R-utils 

%description
One haplotype is a combination of SNP (Single Nucleotide Polymorphisms)
within the QTL (Quantitative Trait Loci). clusterhap groups together all
individuals of a population with the same haplotype. Each group contains
individual with the same allele in each SNP, whether or not missing data.
Thus, clusterhap groups individuals, that to be imputed, have a non-zero
probability of having the same alleles in the entire sequence of SNP's.
Moreover, clusterhap calculates such probability from relative
frequencies.

%prep
%setup -q -c -n %{packname}


%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css

%files
%{rlibdir}/%{packname}