Modules {NetWeaver} | R Documentation |
This example dataset and sample code illustrate the use of NetWeaver
to visualize the complex features of gene coexpression network modules.
data(Modules)
This dataset contains a data.frame called Modules
. Each row is a module, with the module id in the first column. The second column is ranking score. The next 4 columns are coefficients of module-trait correlations. The rest columns are P values of enrichment for various gene signatures. The sample R code shows a pipeline for visualizing the module feature data using a circos style plot.
Minghui Wang <m.h.wang@live.com>, Bin Zhang <bin.zhang@mssm.edu>
## Not run:
#see a tutorial for how to plot this dataset
vignette("netweaver")
## End(Not run)