pssm_seg {PSSMCOOL} | R Documentation |
This feature vector uses PSSM-SD to produce Segmented Auto Covariance Features.
pssm_seg(pssm_name, m = 4)
pssm_name |
name of PSSM Matrix file |
m |
a parameter between 1 and 11 |
feature vector of length 100
A. Dehzangi, K. Paliwal, J. Lyons, A. Sharma, A. J. I. A. T. o. C. B. Sattar, and Bioinformatics, "A segmentation-based method to extract structural and evolutionary features for protein fold recognition," vol. 11, no. 3, pp. 510-519, 2014.
q<-pssm_seg(system.file("extdata", "C7GQS7.txt.pssm", package="PSSMCOOL"),3)