k_mers {PSSMCOOL} | R Documentation |
This function produces all possible 2-mers or 3-mers by counting paths of length 2 or 3 in a dataframe which is thought as a graph
k_mers(s, h)
s |
a dataframe with 2 columns |
h |
is length of k-mer |
all k-mers by counting paths of length h in dataframe which is considered as a graph
s1<-LETTERS[1:4]
s2<-LETTERS[3:6]
s<-data.frame(s1,s2)
dc<-k_mers(s,3)