manhattan_plot {pleiotest} | R Documentation |
Manhattan plot of results from mt_gwas function.
manhattan_plot(mt_gwas_results, trait, bp_positions, ...)
mt_gwas_results |
Object returned by mt_gwas |
trait |
integer indicating the position of the trait (see: names(mt_gwas_results)) to be plotted. |
bp_positions |
dataframe with SNPs base pair positions. colnames msut be 'chr' and 'position', rownames must be SNP identifiers matching names in mt_gwas. |
... |
further graphical parameters. Options include: title=, bty=, pch=, cex.lab=, and cex.main=. |
Manhattan plot