gensearch {colocalized} | R Documentation |
Search the whole genome for clusters of colocalized TF binding sequences.
gensearch(choose, n, cores)
choose |
List of .bed tables |
n |
The cut-off distance |
cores |
Number of cores for parallel processing. Leaving this blank causes the program to use default (series) processing |
Table containing the addresses (as one dimensional intervals) of the members of every cluster, with some annotation data.