msa.merge {EnvNJ} | R Documentation |
Carries out a MSA of a set of different orthologous proteins in different species.
msa.merge(data, outfile = 'any')
data |
input data must be a dataframe where each row corresponds to a protein and each column to a species. |
outfile |
path to the place where a fasta file is going to be saved. If 'any', no file is saved. |
The input data has the same format that the input data used for EnvNJ or SVD-n-Gram methods. Thus, the name of columns must correspond to that of species.
A dataframe containing the MSA (species x position).
msa.tree
## Not run:
data(bovids)
msa.merge(bovids)
## End(Not run)