env.extract {EnvNJ} | R Documentation |
Extracts the sequence environment around a given position.
env.extract(seq, c, r)
seq |
a string protein sequence. |
c |
center of the environment. |
r |
radius of the environment. |
Returns a a strings with the extracted environment sequence.
Aledo et al. Sci Rep. 2015; 5: 16955. (PMID: 26597773)
env.matrices(), env.sp()
env.extract('ARGGQQQCATSYV', c = 8, r = 2)