filterGenes {roots} | R Documentation |
Filter genes
filterGenes(x, mu = 0.01, cv = 2, fano = FALSE)
x |
Matrix to be normalised with cells in rows and genes in columns |
mu |
Meam threshold |
cv |
Coefficient of variation or Fano factor threshold. |
fano |
Default TRUE. Predicate treat CV as Fano factor or CV |
Filter genes Filter genes by mean and either coefficient of variation, cv or Fano factor.
Returns a filtered matrix with same number of cells but fewer genes than 'x'
Wajid Jawaid
## Not run:
expressionGenesFiltered <- filterGenes(x)
## End(Not run)