centered_AUC {GCalcium} | R Documentation |
'centered_AUC' computes the area under the curve (AUC) after centering values using a specified function, such as mean or min. Computed using trapezoidal integration.
centered_AUC(Dataframe, Trial, FUN = mean)
Dataframe |
a GCalcium-format data frame or matrix |
Trial |
a single trial number |
FUN |
a function to apply to each window |
Data frame of AUCs and curve number for each curve
# Get AUCs for trial 2, centered at the mean
df.new <- format_data(data = GCaMP)
centered_AUC(Dataframe = df.new, Trial = 2, FUN = mean)