%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  kfino
%global packver   1.0.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          1.0.0
Release:          1%{?dist}%{?buildtag}
Summary:          Kalman Filter for Impulse Noised Outliers

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-ggplot2 
BuildRequires:    R-CRAN-dplyr 
Requires:         R-CRAN-ggplot2 
Requires:         R-CRAN-dplyr 

%description
A method for detecting outliers with a Kalman filter on impulsed noised
outliers and prediction on cleaned data. 'kfino' is a robust sequential
algorithm allowing to filter data with a large number of outliers. This
algorithm is based on simple latent linear Gaussian processes as in the
Kalman Filter method and is devoted to detect impulse-noised outliers.
These are data points that differ significantly from other observations.
'ML' (Maximization Likelihood) and 'EM' (Expectation-Maximization
algorithm) algorithms were implemented in 'kfino'. The method is described
in full details in the following arXiv e-Print: <arXiv:2208.00961>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}