gg_kronos_circle {kronos} | R Documentation |
Wrapper around 'ggplot2' to make circadian circleplots.
gg_kronos_circle(kronosOut)
kronosOut |
an output object from the main |
a 'ggplot2' compatible object.
#Load prepared data stored in Kronos library
data("kronos_demo")
output <- kronos(formula = Variable_1 ~ time(Timepoint),
data = onevariable, period = 24, verbose = TRUE, pairwise = FALSE)
#Extracting data from the output object:
getKronos_fit(output)
getKronos_trace(output)
getKronos_groupwise(output)
#Plotting:
gg_kronos_circle(output)
gg_kronos_sinusoid(output)
#For high-dimensional data, use fw_kronos:
out_list = fw_kronos(x = bigdata[1:50,], formula = ~ Group + time(Timepoint),
metadata = bigmeta, period = 24, verbose = FALSE, pairwise = TRUE)
#Extracting data from the output object:
kronosListToTable(out_list)
#Plotting:
gg_kronos_acrogram(out_list)