TajimaD.dosage {hierfstat} | R Documentation |
Estimates Tajima's D from dosage data
TajimaD.dosage(dos)
dos |
a ni X nl dosage matrix containing the number of derived/alternate alleles each individual carries at each SNP |
Tajima's D (eqn 38 of Tajima, 1989)
Tajima F. 1989 Statistical Method for Testing the Neutral Mutation Hypothesis by DNA Polymorphism. Genetics 123:585-595.