Warning: Permanently added '35.172.221.200' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6293730-fedora-39-x86_64 --chroot fedora-39-x86_64 Version: 0.68 PID: 6928 Logging PID: 6929 Task: {'appstream': False, 'background': True, 'bootstrap': 'off', 'build_id': 6293730, 'buildroot_pkgs': [], 'chroot': 'fedora-39-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'a533bbc360353d323e98f5d8d6892b7d39f8211d', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-cytometree', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-CRAN-cytometree', 'package_version': '2.0.2-3.copr6293730', 'project_dirname': 'cran', 'project_name': 'cran', 'project_owner': 'iucar', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-39-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'iucar/cran--iucar', 'source_json': {}, 'source_type': None, 'submitter': 'iucar', 'tags': [], 'task_id': '6293730-fedora-39-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-cytometree /var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-cytometree', '/var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree'... Running: git checkout a533bbc360353d323e98f5d8d6892b7d39f8211d -- cmd: ['git', 'checkout', 'a533bbc360353d323e98f5d8d6892b7d39f8211d', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree rc: 0 stdout: stderr: Note: switching to 'a533bbc360353d323e98f5d8d6892b7d39f8211d'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at a533bbc automatic import of R-CRAN-cytometree Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading cytometree_2.0.2.tar.gz INFO: Calling: curl -H Pragma: -o cytometree_2.0.2.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-cytometree/cytometree_2.0.2.tar.gz/md5/c2db466ee7825ed47ab03496ec4db086/cytometree_2.0.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2167k 100 2167k 0 0 21.6M 0 --:--:-- --:--:-- --:--:-- 21.8M INFO: Reading stdout from command: md5sum cytometree_2.0.2.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree/R-CRAN-cytometree.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1692173985.069351 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.0 starting (python version = 3.11.3, NVR = mock-5.0-1.fc38)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree/R-CRAN-cytometree.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.0 INFO: Mock Version: 5.0 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1692173985.069351/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 44 kB/s | 1.5 kB 00:00 Copr repository 209 MB/s | 27 MB 00:00 fedora 78 kB/s | 21 kB 00:00 updates 124 kB/s | 23 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.15-5.fc39 fedora 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-2.fc39 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-0.24 fedora 18 k findutils x86_64 1:4.9.0-5.fc39 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-1.fc39 fedora 67 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 262-1.fc39 fedora 84 k rpm-build x86_64 4.18.92-1.fc39 fedora 78 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.13-8.fc39 fedora 1.3 M tar x86_64 2:1.35-1.fc39 fedora 862 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.1-3.fc39 fedora 1.2 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 3.1.2-1.fc39 fedora 117 k authselect x86_64 1.4.2-3.fc39 fedora 144 k authselect-libs x86_64 1.4.2-3.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-13.fc39 fedora 5.6 M binutils-gold x86_64 2.40-13.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 fedora 837 k coreutils-common x86_64 9.3-2.fc39 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20230731-1.git5ed06e0.fc39 fedora 99 k curl x86_64 8.2.1-1.fc39 fedora 346 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-10.fc39 fedora 77 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.189-4.fc39 fedora 537 k elfutils-debuginfod-client x86_64 0.189-4.fc39 fedora 38 k elfutils-default-yama-scope noarch 0.189-4.fc39 fedora 13 k elfutils-libelf x86_64 0.189-4.fc39 fedora 194 k elfutils-libs x86_64 0.189-4.fc39 fedora 258 k fedora-gpg-keys noarch 39-0.5 fedora 130 k fedora-release noarch 39-0.24 fedora 7.5 k fedora-release-identity-basic noarch 39-0.24 fedora 8.3 k fedora-repos noarch 39-0.5 fedora 9.0 k file x86_64 5.44-5.fc39 fedora 49 k file-libs x86_64 5.44-5.fc39 fedora 729 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 13.2-7.fc39 fedora 4.2 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-1.fc39 fedora 2.2 M glibc-common x86_64 2.38-1.fc39 fedora 348 k glibc-gconv-extra x86_64 2.38-1.fc39 fedora 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.2.0-6.fc39 fedora 27 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21-3.fc39 fedora 765 k libacl x86_64 2.3.1-8.fc39 fedora 23 k libarchive x86_64 3.7.1-1.fc39 fedora 408 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.1-3.fc39 fedora 116 k libbrotli x86_64 1.0.9-13.fc39 fedora 317 k libcap x86_64 2.48-7.fc39 fedora 68 k libcap-ng x86_64 0.8.3-7.fc39 fedora 32 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-1.fc39 fedora 324 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.4.0-6.fc39 fedora 27 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.1-3.fc39 fedora 162 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-1.fc39 fedora 109 k libgomp x86_64 13.2.1-1.fc39 fedora 319 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.1-3.fc39 fedora 154 k libnghttp2 x86_64 1.55.1-2.fc39 fedora 75 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-6.fc39 fedora 120 k libselinux x86_64 3.5-5.fc39 fedora 87 k libsemanage x86_64 3.5-4.fc39 fedora 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.1-3.fc39 fedora 67 k libssh x86_64 0.10.5-2.fc39 fedora 211 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ x86_64 13.2.1-1.fc39 fedora 860 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.3-1.rc2.fc39 fedora 94 k libunistring x86_64 1.1-4.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.1-3.fc39 fedora 28 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.10.4-3.fc39 fedora 701 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-6.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-6.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-1.fc39 fedora 2.2 M p11-kit x86_64 0.25.0-2.fc39 fedora 486 k p11-kit-trust x86_64 0.25.0-2.fc39 fedora 142 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-2.fc39 fedora 548 k pam-libs x86_64 1.5.3-2.fc39 fedora 58 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20230614-2.fc39 fedora 57 k pyproject-srpm-macros noarch 1.9.0-2.fc39 fedora 14 k python-srpm-macros noarch 3.12-2.fc39 fedora 25 k qt5-srpm-macros noarch 5.15.10-2.fc39 fedora 8.3 k qt6-srpm-macros noarch 6.5.2-2.fc39 fedora 9.2 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.18.92-1.fc39 fedora 533 k rpm-build-libs x86_64 4.18.92-1.fc39 fedora 96 k rpm-libs x86_64 4.18.92-1.fc39 fedora 312 k rpm-sequoia x86_64 1.4.1-2.fc39 fedora 869 k rpmautospec-rpm-macros noarch 0.3.5-4.fc39 fedora 8.8 k rust-srpm-macros noarch 24-3.fc39 fedora 12 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.1-2.fc39 fedora 689 k tzdata noarch 2023c-2.fc39 fedora 717 k util-linux-core x86_64 2.39.1-3.fc39 fedora 494 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-38.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 152 Packages Total size: 53 M Installed size: 180 M Downloading Packages: [SKIPPED] alternatives-1.25-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] authselect-1.4.2-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.2-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.15-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.40-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.40-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-9.3-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.14-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.11-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20230731-1.git5ed06e0.fc39.noarch.rpm: Already downloaded [SKIPPED] curl-8.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-11.fc39.x86_64.rpm: Already downloaded [SKIPPED] debugedit-5.0-10.fc39.x86_64.rpm: Already downloaded [SKIPPED] diffutils-3.10-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.15-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] ed-1.19-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.189-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.189-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.189-4.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.189-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.189-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-39-0.5.noarch.rpm: Already downloaded [SKIPPED] fedora-release-39-0.24.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-39-0.24.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-39-0.24.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-39-0.5.noarch.rpm: Already downloaded [SKIPPED] file-5.44-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.44-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] filesystem-3.18-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.9.0-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-12.fc39.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-8.fc39.noarch.rpm: Already downloaded [SKIPPED] gawk-5.2.2-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] gdb-minimal-13.2-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.6.1-2.fc39.noarch.rpm: Already downloaded [SKIPPED] glibc-2.38-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.38-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.38-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.38-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] gmp-6.2.1-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-6-3.fc39.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.2.0-6.fc39.noarch.rpm: Already downloaded [SKIPPED] grep-3.11-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.12-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] info-7.0.3-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] jansson-2.13.1-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-20.fc39.noarch.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] krb5-libs-1.21-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libacl-2.3.1-8.fc39.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.7.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.5.1-8.fc39.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.39.1-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] libcap-2.48-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.47.0-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libcurl-8.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-56.fc39.x86_64.rpm: Already downloaded [SKIPPED] libeconf-0.4.0-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] libevent-2.1.12-9.fc39.x86_64.rpm: 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[SKIPPED] which-2.21-40.fc39.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.2-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] xz-5.4.4-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.4.4-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-38.fc39.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.13-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.5.5-4.fc39.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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go-srpm-macros-3.2.0-6.fc39.noarch 51/152 Verifying : grep-3.11-3.fc39.x86_64 52/152 Verifying : gzip-1.12-6.fc39.x86_64 53/152 Verifying : info-7.0.3-3.fc39.x86_64 54/152 Verifying : jansson-2.13.1-7.fc39.x86_64 55/152 Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 56/152 Verifying : keyutils-libs-1.6.1-7.fc39.x86_64 57/152 Verifying : krb5-libs-1.21-3.fc39.x86_64 58/152 Verifying : libacl-2.3.1-8.fc39.x86_64 59/152 Verifying : libarchive-3.7.1-1.fc39.x86_64 60/152 Verifying : libattr-2.5.1-8.fc39.x86_64 61/152 Verifying : libblkid-2.39.1-3.fc39.x86_64 62/152 Verifying : libbrotli-1.0.9-13.fc39.x86_64 63/152 Verifying : libcap-2.48-7.fc39.x86_64 64/152 Verifying : libcap-ng-0.8.3-7.fc39.x86_64 65/152 Verifying : libcom_err-1.47.0-2.fc39.x86_64 66/152 Verifying : libcurl-8.2.1-1.fc39.x86_64 67/152 Verifying : libdb-5.3.28-56.fc39.x86_64 68/152 Verifying : libeconf-0.4.0-6.fc39.x86_64 69/152 Verifying : libevent-2.1.12-9.fc39.x86_64 70/152 Verifying : libfdisk-2.39.1-3.fc39.x86_64 71/152 Verifying : libffi-3.4.4-4.fc39.x86_64 72/152 Verifying : libgcc-13.2.1-1.fc39.x86_64 73/152 Verifying : libgomp-13.2.1-1.fc39.x86_64 74/152 Verifying : libidn2-2.3.4-3.fc39.x86_64 75/152 Verifying : libmount-2.39.1-3.fc39.x86_64 76/152 Verifying : libnghttp2-1.55.1-2.fc39.x86_64 77/152 Verifying : libnsl2-2.0.0-6.fc39.x86_64 78/152 Verifying : libpkgconf-1.9.5-2.fc39.x86_64 79/152 Verifying : libpsl-0.21.2-4.fc39.x86_64 80/152 Verifying : libpwquality-1.4.5-6.fc39.x86_64 81/152 Verifying : libselinux-3.5-5.fc39.x86_64 82/152 Verifying : libsemanage-3.5-4.fc39.x86_64 83/152 Verifying : libsepol-3.5-2.fc39.x86_64 84/152 Verifying : libsigsegv-2.14-5.fc39.x86_64 85/152 Verifying : libsmartcols-2.39.1-3.fc39.x86_64 86/152 Verifying : libssh-0.10.5-2.fc39.x86_64 87/152 Verifying : libssh-config-0.10.5-2.fc39.noarch 88/152 Verifying : libstdc++-13.2.1-1.fc39.x86_64 89/152 Verifying : libtasn1-4.19.0-3.fc39.x86_64 90/152 Verifying : libtirpc-1.3.3-1.rc2.fc39.x86_64 91/152 Verifying : libunistring-1.1-4.fc39.x86_64 92/152 Verifying : libutempter-1.2.1-10.fc39.x86_64 93/152 Verifying : libuuid-2.39.1-3.fc39.x86_64 94/152 Verifying : libverto-0.3.2-6.fc39.x86_64 95/152 Verifying : libxcrypt-4.4.36-2.fc39.x86_64 96/152 Verifying : libxml2-2.10.4-3.fc39.x86_64 97/152 Verifying : libzstd-1.5.5-4.fc39.x86_64 98/152 Verifying : lua-libs-5.4.6-3.fc39.x86_64 99/152 Verifying : lua-srpm-macros-1-9.fc39.noarch 100/152 Verifying : lz4-libs-1.9.4-4.fc39.x86_64 101/152 Verifying : mpfr-4.2.0-3.fc39.x86_64 102/152 Verifying : ncurses-base-6.4-6.20230520.fc39.noarch 103/152 Verifying : ncurses-libs-6.4-6.20230520.fc39.x86_64 104/152 Verifying : ocaml-srpm-macros-8-2.fc39.noarch 105/152 Verifying : openblas-srpm-macros-2-14.fc39.noarch 106/152 Verifying : openldap-2.6.6-1.fc39.x86_64 107/152 Verifying : openssl-libs-1:3.1.1-1.fc39.x86_64 108/152 Verifying : p11-kit-0.25.0-2.fc39.x86_64 109/152 Verifying : p11-kit-trust-0.25.0-2.fc39.x86_64 110/152 Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 111/152 Verifying : pam-1.5.3-2.fc39.x86_64 112/152 Verifying : pam-libs-1.5.3-2.fc39.x86_64 113/152 Verifying : patch-2.7.6-22.fc39.x86_64 114/152 Verifying : pcre2-10.42-1.fc39.2.x86_64 115/152 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 116/152 Verifying : perl-srpm-macros-1-51.fc39.noarch 117/152 Verifying : pkgconf-1.9.5-2.fc39.x86_64 118/152 Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 119/152 Verifying : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 120/152 Verifying : popt-1.19-3.fc39.x86_64 121/152 Verifying : publicsuffix-list-dafsa-20230614-2.fc39.noarch 122/152 Verifying : pyproject-srpm-macros-1.9.0-2.fc39.noarch 123/152 Verifying : python-srpm-macros-3.12-2.fc39.noarch 124/152 Verifying : qt5-srpm-macros-5.15.10-2.fc39.noarch 125/152 Verifying : qt6-srpm-macros-6.5.2-2.fc39.noarch 126/152 Verifying : readline-8.2-4.fc39.x86_64 127/152 Verifying : redhat-rpm-config-262-1.fc39.noarch 128/152 Verifying : rpm-4.18.92-1.fc39.x86_64 129/152 Verifying : rpm-build-4.18.92-1.fc39.x86_64 130/152 Verifying : rpm-build-libs-4.18.92-1.fc39.x86_64 131/152 Verifying : rpm-libs-4.18.92-1.fc39.x86_64 132/152 Verifying : rpm-sequoia-1.4.1-2.fc39.x86_64 133/152 Verifying : rpmautospec-rpm-macros-0.3.5-4.fc39.noarch 134/152 Verifying : rust-srpm-macros-24-3.fc39.noarch 135/152 Verifying : sed-4.8-14.fc39.x86_64 136/152 Verifying : setup-2.14.4-1.fc39.noarch 137/152 Verifying : shadow-utils-2:4.13-8.fc39.x86_64 138/152 Verifying : sqlite-libs-3.42.0-7.fc39.x86_64 139/152 Verifying : systemd-libs-254.1-2.fc39.x86_64 140/152 Verifying : tar-2:1.35-1.fc39.x86_64 141/152 Verifying : tzdata-2023c-2.fc39.noarch 142/152 Verifying : unzip-6.0-62.fc39.x86_64 143/152 Verifying : util-linux-2.39.1-3.fc39.x86_64 144/152 Verifying : util-linux-core-2.39.1-3.fc39.x86_64 145/152 Verifying : which-2.21-40.fc39.x86_64 146/152 Verifying : xxhash-libs-0.8.2-1.fc39.x86_64 147/152 Verifying : xz-5.4.4-1.fc39.x86_64 148/152 Verifying : xz-libs-5.4.4-1.fc39.x86_64 149/152 Verifying : zip-3.0-38.fc39.x86_64 150/152 Verifying : zlib-1.2.13-4.fc39.x86_64 151/152 Verifying : zstd-1.5.5-4.fc39.x86_64 152/152 Installed products updated. Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-1.fc39.x86_64 authselect-1.4.2-3.fc39.x86_64 authselect-libs-1.4.2-3.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-2.fc39.x86_64 coreutils-common-9.3-2.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch curl-8.2.1-1.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-4.fc39.x86_64 elfutils-debuginfod-client-0.189-4.fc39.x86_64 elfutils-default-yama-scope-0.189-4.fc39.noarch elfutils-libelf-0.189-4.fc39.x86_64 elfutils-libs-0.189-4.fc39.x86_64 fedora-gpg-keys-39-0.5.noarch fedora-release-39-0.24.noarch fedora-release-common-39-0.24.noarch fedora-release-identity-basic-39-0.24.noarch fedora-repos-39-0.5.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-5.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-7.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-1.fc39.x86_64 glibc-common-2.38-1.fc39.x86_64 glibc-gconv-extra-2.38-1.fc39.x86_64 glibc-minimal-langpack-2.38-1.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-6.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21-3.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.1-3.fc39.x86_64 libbrotli-1.0.9-13.fc39.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-7.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-1.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.4.0-6.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.1-3.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-1.fc39.x86_64 libgomp-13.2.1-1.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.1-3.fc39.x86_64 libnghttp2-1.55.1-2.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.1-3.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-1.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.3-1.rc2.fc39.x86_64 libunistring-1.1-4.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.1-3.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-6.20230520.fc39.noarch ncurses-libs-6.4-6.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-1.fc39.x86_64 p11-kit-0.25.0-2.fc39.x86_64 p11-kit-trust-0.25.0-2.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-2.fc39.x86_64 pam-libs-1.5.3-2.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230614-2.fc39.noarch pyproject-srpm-macros-1.9.0-2.fc39.noarch python-srpm-macros-3.12-2.fc39.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch qt6-srpm-macros-6.5.2-2.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.18.92-1.fc39.x86_64 rpm-build-4.18.92-1.fc39.x86_64 rpm-build-libs-4.18.92-1.fc39.x86_64 rpm-libs-4.18.92-1.fc39.x86_64 rpm-sequoia-1.4.1-2.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch rust-srpm-macros-24-3.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.13-8.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.1-2.fc39.x86_64 tar-2:1.35-1.fc39.x86_64 tzdata-2023c-2.fc39.noarch unzip-6.0-62.fc39.x86_64 util-linux-2.39.1-3.fc39.x86_64 util-linux-core-2.39.1-3.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-38.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: zlib-1.2.13-4.fc39.x86_64 lz4-libs-1.9.4-4.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 elfutils-debuginfod-client-0.189-4.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch xz-5.4.4-1.fc39.x86_64 audit-libs-3.1.2-1.fc39.x86_64 authselect-1.4.2-3.fc39.x86_64 systemd-libs-254.1-2.fc39.x86_64 zip-3.0-38.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch rpm-4.18.92-1.fc39.x86_64 which-2.21-40.fc39.x86_64 go-srpm-macros-3.2.0-6.fc39.noarch qt5-srpm-macros-5.15.10-2.fc39.noarch util-linux-2.39.1-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 libunistring-1.1-4.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 coreutils-9.3-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch rust-srpm-macros-24-3.fc39.noarch libuuid-2.39.1-3.fc39.x86_64 findutils-4.9.0-5.fc39.x86_64 alternatives-1.25-1.fc39.x86_64 sed-4.8-14.fc39.x86_64 libfdisk-2.39.1-3.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 openssl-libs-3.1.1-1.fc39.x86_64 libeconf-0.4.0-6.fc39.x86_64 rpm-build-4.18.92-1.fc39.x86_64 libcap-2.48-7.fc39.x86_64 pkgconf-pkg-config-1.9.5-2.fc39.x86_64 openldap-2.6.6-1.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 pam-libs-1.5.3-2.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 glibc-2.38-1.fc39.x86_64 gzip-1.12-6.fc39.x86_64 rpm-build-libs-4.18.92-1.fc39.x86_64 popt-1.19-3.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 authselect-libs-1.4.2-3.fc39.x86_64 file-5.44-5.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 keyutils-libs-1.6.1-7.fc39.x86_64 fedora-release-identity-basic-39-0.24.noarch libxcrypt-4.4.36-2.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch zstd-1.5.5-4.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch fedora-release-39-0.24.noarch libsemanage-3.5-4.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 curl-8.2.1-1.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 elfutils-0.189-4.fc39.x86_64 elfutils-default-yama-scope-0.189-4.fc39.noarch bzip2-libs-1.0.8-16.fc39.x86_64 setup-2.14.4-1.fc39.noarch grep-3.11-3.fc39.x86_64 tar-1.35-1.fc39.x86_64 tzdata-2023c-2.fc39.noarch bzip2-1.0.8-16.fc39.x86_64 coreutils-common-9.3-2.fc39.x86_64 pam-1.5.3-2.fc39.x86_64 libtirpc-1.3.3-1.rc2.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libnghttp2-1.55.1-2.fc39.x86_64 readline-8.2-4.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 libsmartcols-2.39.1-3.fc39.x86_64 libgomp-13.2.1-1.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch libpkgconf-1.9.5-2.fc39.x86_64 publicsuffix-list-dafsa-20230614-2.fc39.noarch shadow-utils-4.13-8.fc39.x86_64 fpc-srpm-macros-1.3-8.fc39.noarch elfutils-libs-0.189-4.fc39.x86_64 crypto-policies-20230731-1.git5ed06e0.fc39.noarch libverto-0.3.2-6.fc39.x86_64 gdb-minimal-13.2-7.fc39.x86_64 ncurses-base-6.4-6.20230520.fc39.noarch pcre2-10.42-1.fc39.2.x86_64 glibc-common-2.38-1.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 gawk-5.2.2-2.fc39.x86_64 libstdc++-13.2.1-1.fc39.x86_64 glibc-minimal-langpack-2.38-1.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch libbrotli-1.0.9-13.fc39.x86_64 fedora-gpg-keys-39-0.5.noarch libattr-2.5.1-8.fc39.x86_64 rpm-sequoia-1.4.1-2.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 fedora-release-common-39-0.24.noarch cracklib-2.9.11-2.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 glibc-gconv-extra-2.38-1.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 rpm-libs-4.18.92-1.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch cyrus-sasl-lib-2.1.28-11.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 bash-5.2.15-5.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 binutils-2.40-13.fc39.x86_64 gpg-pubkey-18b8e74c-62f2920f pyproject-srpm-macros-1.9.0-2.fc39.noarch filesystem-3.18-6.fc39.x86_64 ed-1.19-4.fc39.x86_64 qt6-srpm-macros-6.5.2-2.fc39.noarch libcap-ng-0.8.3-7.fc39.x86_64 python-srpm-macros-3.12-2.fc39.noarch libblkid-2.39.1-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch gmp-6.2.1-5.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch info-7.0.3-3.fc39.x86_64 p11-kit-trust-0.25.0-2.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 cpio-2.14-4.fc39.x86_64 libcurl-8.2.1-1.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch util-linux-core-2.39.1-3.fc39.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch ncurses-libs-6.4-6.20230520.fc39.x86_64 perl-srpm-macros-1-51.fc39.noarch p11-kit-0.25.0-2.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libmount-2.39.1-3.fc39.x86_64 fedora-repos-39-0.5.noarch ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch libgcc-13.2.1-1.fc39.x86_64 basesystem-11-18.fc39.noarch krb5-libs-1.21-3.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch elfutils-libelf-0.189-4.fc39.x86_64 unzip-6.0-62.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ibinkyx2/R-CRAN-cytometree/R-CRAN-cytometree.spec) Config(child) 0 minutes 19 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1692173985.069351 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.0 starting (python version = 3.11.3, NVR = mock-5.0-1.fc38)... Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.0 INFO: Mock Version: 5.0 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1692173985.069351/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 42 kB/s | 1.5 kB 00:00 fedora 78 kB/s | 21 kB 00:00 updates 610 kB/s | 23 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm Start: build setup for R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 57 kB/s | 1.5 kB 00:00 Copr repository 164 MB/s | 27 MB 00:00 fedora 586 kB/s | 21 kB 00:00 updates 286 kB/s | 23 kB 00:00 Dependencies resolved. ======================================================================================== Package Arch Version Repo Size ======================================================================================== Installing: R-CRAN-GoFKernel noarch 2.1.1-3.fc39.copr6283428 copr_base 77 k R-CRAN-Rcpp x86_64 1.0.11-1.fc39.copr6279302 copr_base 2.0 M R-CRAN-RcppArmadillo x86_64 0.12.6.1.0-1.fc39.copr6282865 copr_base 928 k R-CRAN-cowplot noarch 1.1.1-1.fc39.copr6291051 copr_base 1.3 M R-CRAN-ggplot2 noarch 3.4.3-1.fc39.copr6290076 copr_base 3.3 M R-CRAN-igraph x86_64 1.5.1-1.fc39.copr6285207 copr_base 4.5 M R-CRAN-mclust x86_64 6.0.0-1.fc39.copr6279409 copr_base 3.9 M R-core x86_64 4.3.1-3.fc39 fedora 64 M R-devel x86_64 4.3.1-3.fc39 fedora 10 k Installing dependencies: R-CRAN-MASS x86_64 7.3.60-1.fc39.copr6282081 copr_base 1.2 M R-CRAN-Matrix x86_64 1.6.1-1.fc39.copr6284603 copr_base 4.2 M R-CRAN-R6 noarch 2.5.1-1.fc39.copr6279323 copr_base 96 k R-CRAN-RColorBrewer noarch 1.1.3-1.fc39.copr6279333 copr_base 65 k R-CRAN-cli x86_64 3.6.1-1.fc39.copr6279347 copr_base 1.3 M R-CRAN-colorspace x86_64 2.1.0-1.fc39.copr6279338 copr_base 2.4 M R-CRAN-fansi x86_64 1.0.4-1.fc39.copr6279337 copr_base 338 k R-CRAN-farver x86_64 2.1.1-1.fc39.copr6279385 copr_base 1.3 M R-CRAN-glue x86_64 1.6.2-1.fc39.copr6279303 copr_base 162 k R-CRAN-gtable noarch 0.3.3-1.fc39.copr6285201 copr_base 232 k R-CRAN-isoband x86_64 0.2.7-1.fc39.copr6280488 copr_base 1.6 M R-CRAN-labeling noarch 0.4.2-1.fc39.copr6279332 copr_base 77 k R-CRAN-lattice x86_64 0.21.8-1.fc39.copr6282080 copr_base 1.4 M R-CRAN-lifecycle noarch 1.0.3-1.fc39.copr6283543 copr_base 130 k R-CRAN-magrittr x86_64 2.0.3-1.fc39.copr6279321 copr_base 222 k R-CRAN-mgcv x86_64 1.9.0-1.fc39.copr6286334 copr_base 3.3 M R-CRAN-munsell noarch 0.5.0-3.fc39.copr6282866 copr_base 251 k R-CRAN-nlme x86_64 3.1.163-1.fc39.copr6284604 copr_base 2.4 M R-CRAN-pillar noarch 1.9.0-1.fc39.copr6286818 copr_base 626 k R-CRAN-pkgconfig noarch 2.0.3-3.fc39.copr6279322 copr_base 30 k R-CRAN-rlang x86_64 1.1.1-1.fc39.copr6279308 copr_base 1.6 M R-CRAN-scales noarch 1.2.1-1.fc39.copr6285210 copr_base 638 k R-CRAN-tibble x86_64 3.2.1-1.fc39.copr6288598 copr_base 632 k R-CRAN-utf8 x86_64 1.2.3-1.fc39.copr6279339 copr_base 150 k R-CRAN-vctrs x86_64 0.6.3-1.fc39.copr6285213 copr_base 1.3 M R-CRAN-viridisLite noarch 0.4.2-1.fc39.copr6279312 copr_base 1.2 M R-CRAN-withr noarch 2.5.0-1.fc39.copr6279313 copr_base 257 k R-core-devel x86_64 4.3.1-3.fc39 fedora 94 k R-java x86_64 4.3.1-3.fc39 fedora 11 k R-java-devel x86_64 4.3.1-3.fc39 fedora 10 k R-littler x86_64 0.3.18-4.fc39 fedora 76 k R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k alsa-lib x86_64 1.2.9-4.fc39 fedora 518 k annobin-docs noarch 12.23-1.fc39 fedora 96 k annobin-plugin-gcc x86_64 12.23-1.fc39 fedora 960 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k brotli x86_64 1.0.9-13.fc39 fedora 315 k brotli-devel x86_64 1.0.9-13.fc39 fedora 31 k bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cairo x86_64 1.17.8-5.fc39 fedora 705 k cmake-filesystem x86_64 3.27.2-1.fc39 fedora 18 k copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k cpp x86_64 13.2.1-1.fc39 fedora 11 M crypto-policies-scripts noarch 20230731-1.git5ed06e0.fc39 fedora 115 k cups-libs x86_64 1:2.4.6-4.fc39 fedora 267 k dbus-libs x86_64 1:1.14.8-2.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-8.fc39 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.1-1.fc39 fedora 8.4 k expat x86_64 2.5.0-3.fc39 fedora 110 k flexiblas x86_64 3.3.1-5.fc39 fedora 33 k flexiblas-devel x86_64 3.3.1-5.fc39 fedora 117 k flexiblas-netlib x86_64 3.3.1-5.fc39 fedora 3.1 M flexiblas-netlib64 x86_64 3.3.1-5.fc39 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc39 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.3.1-5.fc39 fedora 17 k fontconfig x86_64 2.14.2-4.fc39 fedora 296 k fontconfig-devel x86_64 2.14.2-4.fc39 fedora 165 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k freetype-devel x86_64 2.13.1-2.fc39 fedora 950 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc x86_64 13.2.1-1.fc39 fedora 34 M gcc-c++ x86_64 13.2.1-1.fc39 fedora 13 M gcc-gfortran x86_64 13.2.1-1.fc39 fedora 12 M gcc-plugin-annobin x86_64 13.2.1-1.fc39 fedora 47 k gettext x86_64 0.22-2.fc39 fedora 1.1 M gettext-envsubst x86_64 0.22-2.fc39 fedora 36 k gettext-libs x86_64 0.22-2.fc39 fedora 328 k gettext-runtime x86_64 0.22-2.fc39 fedora 120 k glib2 x86_64 2.77.2-1.fc39 fedora 2.8 M glib2-devel x86_64 2.77.2-1.fc39 fedora 595 k glibc-devel x86_64 2.38-1.fc39 fedora 80 k glibc-headers-x86 noarch 2.38-1.fc39 fedora 565 k glpk x86_64 5.0-7.fc39 fedora 387 k gnutls x86_64 3.8.0-7.fc39 fedora 1.1 M google-noto-fonts-common noarch 20230801-2.fc39 fedora 16 k google-noto-sans-vf-fonts noarch 20230801-2.fc39 fedora 583 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphite2-devel x86_64 1.3.14-12.fc39 fedora 20 k guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M harfbuzz x86_64 8.1.1-1.fc39 fedora 949 k harfbuzz-devel x86_64 8.1.1-1.fc39 fedora 449 k harfbuzz-icu x86_64 8.1.1-1.fc39 fedora 17 k java-17-openjdk x86_64 1:17.0.8.0.7-1.fc39 fedora 407 k java-17-openjdk-devel x86_64 1:17.0.8.0.7-1.fc39 fedora 4.7 M java-17-openjdk-headless x86_64 1:17.0.8.0.7-1.fc39 fedora 44 M javapackages-filesystem noarch 6.1.0-10.fc39 fedora 12 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k kernel-headers x86_64 6.5.0-0.rc6.git0.1.fc39 fedora 1.5 M libICE x86_64 1.0.10-11.fc39 fedora 70 k libRmath x86_64 4.3.1-3.fc39 fedora 122 k libRmath-devel x86_64 4.3.1-3.fc39 fedora 16 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.6-2.fc39 fedora 649 k libX11-common noarch 1.8.6-2.fc39 fedora 175 k libX11-devel x86_64 1.8.6-2.fc39 fedora 1.0 M libX11-xcb x86_64 1.8.6-2.fc39 fedora 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXau-devel x86_64 1.0.11-3.fc39 fedora 14 k libXcomposite x86_64 0.4.5-10.fc39 fedora 23 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXft-devel x86_64 2.3.8-3.fc39 fedora 50 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXmu x86_64 1.1.4-3.fc39 fedora 76 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXrender-devel x86_64 0.9.11-3.fc39 fedora 19 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXtst x86_64 1.2.4-3.fc39 fedora 20 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libblkid-devel x86_64 2.39.1-3.fc39 fedora 18 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libffi-devel x86_64 3.4.4-4.fc39 fedora 29 k libfontenc x86_64 1.1.6-3.fc39 fedora 32 k libgfortran x86_64 13.2.1-1.fc39 fedora 903 k libicu x86_64 73.2-2.fc39 fedora 11 M libicu-devel x86_64 73.2-2.fc39 fedora 924 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k libmount-devel x86_64 2.39.1-3.fc39 fedora 18 k libmpc x86_64 1.3.1-3.fc39 fedora 70 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libpng-devel x86_64 2:1.6.37-15.fc39 fedora 291 k libquadmath x86_64 13.2.1-1.fc39 fedora 194 k libquadmath-devel x86_64 13.2.1-1.fc39 fedora 36 k libselinux-devel x86_64 3.5-5.fc39 fedora 151 k libsepol-devel x86_64 3.5-2.fc39 fedora 49 k libstdc++-devel x86_64 13.2.1-1.fc39 fedora 2.6 M libthai x86_64 0.1.29-6.fc39 fedora 213 k libtiff x86_64 4.4.0-7.fc39 fedora 197 k libtirpc-devel x86_64 1.3.3-1.rc2.fc39 fedora 125 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libwebp x86_64 1.3.1-2.fc39 fedora 284 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxcb-devel x86_64 1.13.1-12.fc39 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-2.fc39 fedora 30 k libxml2-devel x86_64 2.10.4-3.fc39 fedora 527 k lksctp-tools x86_64 1.0.19-4.fc39 fedora 92 k lua x86_64 5.4.6-3.fc39 fedora 191 k lua-posix x86_64 36.2.1-3.fc39 fedora 143 k make x86_64 1:4.4.1-2.fc39 fedora 589 k mkfontscale x86_64 1.2.2-4.fc39 fedora 32 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k nettle x86_64 3.9.1-2.fc39 fedora 425 k nspr x86_64 4.35.0-11.fc39 fedora 137 k nss x86_64 3.92.0-1.fc39 fedora 696 k nss-softokn x86_64 3.92.0-1.fc39 fedora 1.0 M nss-softokn-freebl x86_64 3.92.0-1.fc39 fedora 327 k nss-sysinit x86_64 3.92.0-1.fc39 fedora 18 k nss-util x86_64 3.92.0-1.fc39 fedora 87 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openblas-openmp64 x86_64 0.3.21-6.fc39 fedora 4.8 M pango x86_64 1.51.0-1.fc39 fedora 343 k pcre2-devel x86_64 10.42-1.fc39.2 fedora 505 k pcre2-utf16 x86_64 10.42-1.fc39.2 fedora 212 k pcre2-utf32 x86_64 10.42-1.fc39.2 fedora 200 k pixman x86_64 0.42.2-2.fc39 fedora 288 k python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M python3 x86_64 3.12.0~rc1-1.fc39 fedora 26 k python3-libs x86_64 3.12.0~rc1-1.fc39 fedora 9.2 M python3-setuptools noarch 67.7.2-5.fc39 fedora 1.5 M suitesparse x86_64 5.13.0-3.fc39 fedora 1.1 M sysprof-capture-devel x86_64 3.48.0-2.fc39 fedora 52 k tcl x86_64 1:8.6.12-5.fc39 fedora 1.1 M tcl-devel x86_64 1:8.6.12-5.fc39 fedora 169 k tk x86_64 1:8.6.12-5.fc39 fedora 1.6 M tk-devel x86_64 1:8.6.12-5.fc39 fedora 537 k tre x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 43 k tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k tre-devel x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k ttmkfdir x86_64 3.0.9-69.fc39 fedora 56 k tzdata-java noarch 2023c-2.fc39 fedora 208 k xdg-utils noarch 1.1.3-14.fc39 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k xorg-x11-proto-devel noarch 2023.2-2.fc39 fedora 298 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Transaction Summary ======================================================================================== Install 190 Packages Total size: 311 M Total download size: 12 M Installed size: 930 M Downloading Packages: [SKIPPED] R-CRAN-MASS-7.3.60-1.fc39.copr6282081.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-Matrix-1.6.1-1.fc39.copr6284603.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-R6-2.5.1-1.fc39.copr6279323.noarch.rpm: Already downloaded [SKIPPED] R-CRAN-RColorBrewer-1.1.3-1.fc39.copr6279333.noarch.rpm: Already downloaded [SKIPPED] R-CRAN-Rcpp-1.0.11-1.fc39.copr6279302.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-cli-3.6.1-1.fc39.copr6279347.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-colorspace-2.1.0-1.fc39.copr6279338.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-fansi-1.0.4-1.fc39.copr6279337.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-farver-2.1.1-1.fc39.copr6279385.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-ggplot2-3.4.3-1.fc39.copr6290076.noarch.rpm: Already downloaded [SKIPPED] R-CRAN-glue-1.6.2-1.fc39.copr6279303.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-gtable-0.3.3-1.fc39.copr6285201.noarch.rpm: Already downloaded [SKIPPED] 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annobin-docs-12.23-1.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.23-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-24.fc39.x86_64.rpm: Already downloaded [SKIPPED] brotli-1.0.9-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] brotli-devel-1.0.9-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-devel-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] cairo-1.17.8-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.27.2-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] copy-jdk-configs-4.1-3.fc39.noarch.rpm: Already downloaded [SKIPPED] cpp-13.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch.rpm: Already downloaded [SKIPPED] cups-libs-2.4.6-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] dbus-libs-1.14.8-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] default-fonts-core-sans-4.0-8.fc39.noarch.rpm: Already downloaded [SKIPPED] 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google-noto-fonts-common-20230801-2.fc39.noarch.rpm: Already downloaded [SKIPPED] google-noto-sans-vf-fonts-20230801-2.fc39.noarch.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-12.fc39.x86_64.rpm: Already downloaded [SKIPPED] graphite2-devel-1.3.14-12.fc39.x86_64.rpm: Already downloaded [SKIPPED] guile22-2.2.7-9.fc39.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-8.1.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-devel-8.1.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] harfbuzz-icu-8.1.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] java-17-openjdk-17.0.8.0.7-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] java-17-openjdk-devel-17.0.8.0.7-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] java-17-openjdk-headless-17.0.8.0.7-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] javapackages-filesystem-6.1.0-10.fc39.noarch.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-26.fc39.x86_64.rpm: Already downloaded [SKIPPED] kernel-headers-6.5.0-0.rc6.git0.1.fc39.x86_64.rpm: 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libmpc-1.3.1-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] libpng-1.6.37-15.fc39.x86_64.rpm: Already downloaded [SKIPPED] libpng-devel-1.6.37-15.fc39.x86_64.rpm: Already downloaded [SKIPPED] libquadmath-13.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] libquadmath-devel-13.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] libselinux-devel-3.5-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] libsepol-devel-3.5-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libstdc++-devel-13.2.1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] libthai-0.1.29-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] libtiff-4.4.0-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] libtirpc-devel-1.3.3-1.rc2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.7-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] libwebp-1.3.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libxcb-1.13.1-12.fc39.x86_64.rpm: Already downloaded [SKIPPED] libxcb-devel-1.13.1-12.fc39.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-devel-4.4.36-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] libxml2-devel-2.10.4-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] lksctp-tools-1.0.19-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] lua-5.4.6-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] lua-posix-36.2.1-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] make-4.4.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] mkfontscale-1.2.2-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] mpdecimal-2.5.1-7.fc39.x86_64.rpm: Already downloaded [SKIPPED] nettle-3.9.1-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] nspr-4.35.0-11.fc39.x86_64.rpm: Already downloaded [SKIPPED] nss-3.92.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] nss-softokn-3.92.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] nss-softokn-freebl-3.92.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] nss-sysinit-3.92.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] nss-util-3.92.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] openblas-0.3.21-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] openblas-openmp-0.3.21-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] openblas-openmp64-0.3.21-6.fc39.x86_64.rpm: Already downloaded [SKIPPED] pango-1.51.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] pcre2-devel-10.42-1.fc39.2.x86_64.rpm: Already downloaded [SKIPPED] pcre2-utf16-10.42-1.fc39.2.x86_64.rpm: Already downloaded [SKIPPED] pcre2-utf32-10.42-1.fc39.2.x86_64.rpm: Already downloaded [SKIPPED] pixman-0.42.2-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] python-pip-wheel-23.2.1-1.fc39.noarch.rpm: Already downloaded [SKIPPED] python3-3.12.0~rc1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] python3-libs-3.12.0~rc1-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] python3-setuptools-67.7.2-5.fc39.noarch.rpm: Already downloaded [SKIPPED] sysprof-capture-devel-3.48.0-2.fc39.x86_64.rpm: Already downloaded [SKIPPED] tcl-8.6.12-5.fc39.x86_64.rpm: Already downloaded [SKIPPED] tcl-devel-8.6.12-5.fc39.x86_64.rpm: Already 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(185/190): R-CRAN-cowplot-1.1.1-1.fc39.copr6291 39 MB/s | 1.3 MB 00:00 (186/190): R-CRAN-GoFKernel-2.1.1-3.fc39.copr62 2.2 MB/s | 77 kB 00:00 (187/190): R-CRAN-igraph-1.5.1-1.fc39.copr62852 180 MB/s | 4.5 MB 00:00 (188/190): R-CRAN-mclust-6.0.0-1.fc39.copr62794 129 MB/s | 3.9 MB 00:00 (189/190): glpk-5.0-7.fc39.x86_64.rpm 12 MB/s | 387 kB 00:00 (190/190): suitesparse-5.13.0-3.fc39.x86_64.rpm 74 MB/s | 1.1 MB 00:00 -------------------------------------------------------------------------------- Total 25 MB/s | 12 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: copy-jdk-configs-4.1-3.fc39.noarch 1/1 Running scriptlet: java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86_64 1/1 Preparing : 1/1 Installing : zlib-devel-1.2.13-4.fc39.x86_64 1/190 Installing : nspr-4.35.0-11.fc39.x86_64 2/190 Installing : libgfortran-13.2.1-1.fc39.x86_64 3/190 Installing : nss-util-3.92.0-1.fc39.x86_64 4/190 Installing : xorg-x11-proto-devel-2023.2-2.fc39.noarch 5/190 Installing : libquadmath-13.2.1-1.fc39.x86_64 6/190 Installing : libpng-2:1.6.37-15.fc39.x86_64 7/190 Installing : libmpc-1.3.1-3.fc39.x86_64 8/190 Installing : tcl-1:8.6.12-5.fc39.x86_64 9/190 Installing : libicu-73.2-2.fc39.x86_64 10/190 Installing : fonts-filesystem-1:2.0.5-12.fc39.noarch 11/190 Installing : libicu-devel-73.2-2.fc39.x86_64 12/190 Installing : tcl-devel-1:8.6.12-5.fc39.x86_64 13/190 Installing : xz-devel-5.4.4-1.fc39.x86_64 14/190 Installing : openblas-0.3.21-6.fc39.x86_64 15/190 Installing : libjpeg-turbo-2.1.4-3.fc39.x86_64 16/190 Installing : 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R-CRAN-rlang-1.1.1-1.fc39.copr6279308.x86_64 28/190 Verifying : R-CRAN-scales-1.2.1-1.fc39.copr6285210.noarch 29/190 Verifying : R-CRAN-tibble-3.2.1-1.fc39.copr6288598.x86_64 30/190 Verifying : R-CRAN-utf8-1.2.3-1.fc39.copr6279339.x86_64 31/190 Verifying : R-CRAN-vctrs-0.6.3-1.fc39.copr6285213.x86_64 32/190 Verifying : R-CRAN-viridisLite-0.4.2-1.fc39.copr6279312.noar 33/190 Verifying : R-CRAN-withr-2.5.0-1.fc39.copr6279313.noarch 34/190 Verifying : R-core-4.3.1-3.fc39.x86_64 35/190 Verifying : R-core-devel-4.3.1-3.fc39.x86_64 36/190 Verifying : R-devel-4.3.1-3.fc39.x86_64 37/190 Verifying : R-java-4.3.1-3.fc39.x86_64 38/190 Verifying : R-java-devel-4.3.1-3.fc39.x86_64 39/190 Verifying : R-littler-0.3.18-4.fc39.x86_64 40/190 Verifying : R-rpm-macros-1.2.1-7.fc39.noarch 41/190 Verifying : abattis-cantarell-vf-fonts-0.301-10.fc39.noarch 42/190 Verifying : alsa-lib-1.2.9-4.fc39.x86_64 43/190 Verifying : annobin-docs-12.23-1.fc39.noarch 44/190 Verifying : 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Verifying : flexiblas-netlib64-3.3.1-5.fc39.x86_64 64/190 Verifying : flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64 65/190 Verifying : flexiblas-openblas-openmp64-3.3.1-5.fc39.x86_64 66/190 Verifying : fontconfig-2.14.2-4.fc39.x86_64 67/190 Verifying : fontconfig-devel-2.14.2-4.fc39.x86_64 68/190 Verifying : fonts-filesystem-1:2.0.5-12.fc39.noarch 69/190 Verifying : freetype-2.13.1-2.fc39.x86_64 70/190 Verifying : freetype-devel-2.13.1-2.fc39.x86_64 71/190 Verifying : fribidi-1.0.13-2.fc39.x86_64 72/190 Verifying : gc-8.2.2-4.fc39.x86_64 73/190 Verifying : gcc-13.2.1-1.fc39.x86_64 74/190 Verifying : gcc-c++-13.2.1-1.fc39.x86_64 75/190 Verifying : gcc-gfortran-13.2.1-1.fc39.x86_64 76/190 Verifying : gcc-plugin-annobin-13.2.1-1.fc39.x86_64 77/190 Verifying : gettext-0.22-2.fc39.x86_64 78/190 Verifying : gettext-envsubst-0.22-2.fc39.x86_64 79/190 Verifying : gettext-libs-0.22-2.fc39.x86_64 80/190 Verifying : gettext-runtime-0.22-2.fc39.x86_64 81/190 Verifying : glib2-2.77.2-1.fc39.x86_64 82/190 Verifying : glib2-devel-2.77.2-1.fc39.x86_64 83/190 Verifying : glibc-devel-2.38-1.fc39.x86_64 84/190 Verifying : glibc-headers-x86-2.38-1.fc39.noarch 85/190 Verifying : glpk-5.0-7.fc39.x86_64 86/190 Verifying : gnutls-3.8.0-7.fc39.x86_64 87/190 Verifying : google-noto-fonts-common-20230801-2.fc39.noarch 88/190 Verifying : google-noto-sans-vf-fonts-20230801-2.fc39.noarch 89/190 Verifying : graphite2-1.3.14-12.fc39.x86_64 90/190 Verifying : graphite2-devel-1.3.14-12.fc39.x86_64 91/190 Verifying : guile22-2.2.7-9.fc39.x86_64 92/190 Verifying : harfbuzz-8.1.1-1.fc39.x86_64 93/190 Verifying : harfbuzz-devel-8.1.1-1.fc39.x86_64 94/190 Verifying : harfbuzz-icu-8.1.1-1.fc39.x86_64 95/190 Verifying : java-17-openjdk-1:17.0.8.0.7-1.fc39.x86_64 96/190 Verifying : java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.x86_64 97/190 Verifying : java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86 98/190 Verifying : javapackages-filesystem-6.1.0-10.fc39.noarch 99/190 Verifying : jbigkit-libs-2.1-26.fc39.x86_64 100/190 Verifying : kernel-headers-6.5.0-0.rc6.git0.1.fc39.x86_64 101/190 Verifying : libICE-1.0.10-11.fc39.x86_64 102/190 Verifying : libRmath-4.3.1-3.fc39.x86_64 103/190 Verifying : libRmath-devel-4.3.1-3.fc39.x86_64 104/190 Verifying : libSM-1.2.3-13.fc39.x86_64 105/190 Verifying : libX11-1.8.6-2.fc39.x86_64 106/190 Verifying : libX11-common-1.8.6-2.fc39.noarch 107/190 Verifying : libX11-devel-1.8.6-2.fc39.x86_64 108/190 Verifying : libX11-xcb-1.8.6-2.fc39.x86_64 109/190 Verifying : libXau-1.0.11-3.fc39.x86_64 110/190 Verifying : libXau-devel-1.0.11-3.fc39.x86_64 111/190 Verifying : libXcomposite-0.4.5-10.fc39.x86_64 112/190 Verifying : libXext-1.3.5-3.fc39.x86_64 113/190 Verifying : libXft-2.3.8-3.fc39.x86_64 114/190 Verifying : libXft-devel-2.3.8-3.fc39.x86_64 115/190 Verifying : libXi-1.8.1-2.fc39.x86_64 116/190 Verifying : libXmu-1.1.4-3.fc39.x86_64 117/190 Verifying : libXrender-0.9.11-3.fc39.x86_64 118/190 Verifying : libXrender-devel-0.9.11-3.fc39.x86_64 119/190 Verifying : libXt-1.2.1-5.fc39.x86_64 120/190 Verifying : libXtst-1.2.4-3.fc39.x86_64 121/190 Verifying : libb2-0.98.1-9.fc39.x86_64 122/190 Verifying : libblkid-devel-2.39.1-3.fc39.x86_64 123/190 Verifying : libdatrie-0.2.13-7.fc39.x86_64 124/190 Verifying : libffi-devel-3.4.4-4.fc39.x86_64 125/190 Verifying : libfontenc-1.1.6-3.fc39.x86_64 126/190 Verifying : libgfortran-13.2.1-1.fc39.x86_64 127/190 Verifying : libicu-73.2-2.fc39.x86_64 128/190 Verifying : libicu-devel-73.2-2.fc39.x86_64 129/190 Verifying : libjpeg-turbo-2.1.4-3.fc39.x86_64 130/190 Verifying : libmount-devel-2.39.1-3.fc39.x86_64 131/190 Verifying : libmpc-1.3.1-3.fc39.x86_64 132/190 Verifying : libpng-2:1.6.37-15.fc39.x86_64 133/190 Verifying : libpng-devel-2:1.6.37-15.fc39.x86_64 134/190 Verifying : libquadmath-13.2.1-1.fc39.x86_64 135/190 Verifying : libquadmath-devel-13.2.1-1.fc39.x86_64 136/190 Verifying : libselinux-devel-3.5-5.fc39.x86_64 137/190 Verifying : libsepol-devel-3.5-2.fc39.x86_64 138/190 Verifying : libstdc++-devel-13.2.1-1.fc39.x86_64 139/190 Verifying : libthai-0.1.29-6.fc39.x86_64 140/190 Verifying : libtiff-4.4.0-7.fc39.x86_64 141/190 Verifying : libtirpc-devel-1.3.3-1.rc2.fc39.x86_64 142/190 Verifying : libtool-ltdl-2.4.7-7.fc39.x86_64 143/190 Verifying : libwebp-1.3.1-2.fc39.x86_64 144/190 Verifying : libxcb-1.13.1-12.fc39.x86_64 145/190 Verifying : libxcb-devel-1.13.1-12.fc39.x86_64 146/190 Verifying : libxcrypt-devel-4.4.36-2.fc39.x86_64 147/190 Verifying : libxml2-devel-2.10.4-3.fc39.x86_64 148/190 Verifying : lksctp-tools-1.0.19-4.fc39.x86_64 149/190 Verifying : lua-5.4.6-3.fc39.x86_64 150/190 Verifying : lua-posix-36.2.1-3.fc39.x86_64 151/190 Verifying : make-1:4.4.1-2.fc39.x86_64 152/190 Verifying : mkfontscale-1.2.2-4.fc39.x86_64 153/190 Verifying : mpdecimal-2.5.1-7.fc39.x86_64 154/190 Verifying : nettle-3.9.1-2.fc39.x86_64 155/190 Verifying : nspr-4.35.0-11.fc39.x86_64 156/190 Verifying : nss-3.92.0-1.fc39.x86_64 157/190 Verifying : nss-softokn-3.92.0-1.fc39.x86_64 158/190 Verifying : nss-softokn-freebl-3.92.0-1.fc39.x86_64 159/190 Verifying : nss-sysinit-3.92.0-1.fc39.x86_64 160/190 Verifying : nss-util-3.92.0-1.fc39.x86_64 161/190 Verifying : openblas-0.3.21-6.fc39.x86_64 162/190 Verifying : openblas-openmp-0.3.21-6.fc39.x86_64 163/190 Verifying : openblas-openmp64-0.3.21-6.fc39.x86_64 164/190 Verifying : pango-1.51.0-1.fc39.x86_64 165/190 Verifying : pcre2-devel-10.42-1.fc39.2.x86_64 166/190 Verifying : pcre2-utf16-10.42-1.fc39.2.x86_64 167/190 Verifying : pcre2-utf32-10.42-1.fc39.2.x86_64 168/190 Verifying : pixman-0.42.2-2.fc39.x86_64 169/190 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 170/190 Verifying : python3-3.12.0~rc1-1.fc39.x86_64 171/190 Verifying : python3-libs-3.12.0~rc1-1.fc39.x86_64 172/190 Verifying : python3-setuptools-67.7.2-5.fc39.noarch 173/190 Verifying : suitesparse-5.13.0-3.fc39.x86_64 174/190 Verifying : sysprof-capture-devel-3.48.0-2.fc39.x86_64 175/190 Verifying : tcl-1:8.6.12-5.fc39.x86_64 176/190 Verifying : tcl-devel-1:8.6.12-5.fc39.x86_64 177/190 Verifying : tk-1:8.6.12-5.fc39.x86_64 178/190 Verifying : tk-devel-1:8.6.12-5.fc39.x86_64 179/190 Verifying : tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 180/190 Verifying : tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noar 181/190 Verifying : tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_6 182/190 Verifying : ttmkfdir-3.0.9-69.fc39.x86_64 183/190 Verifying : tzdata-java-2023c-2.fc39.noarch 184/190 Verifying : xdg-utils-1.1.3-14.fc39.noarch 185/190 Verifying : xml-common-0.6.3-61.fc39.noarch 186/190 Verifying : xorg-x11-fonts-Type1-7.5-36.fc39.noarch 187/190 Verifying : xorg-x11-proto-devel-2023.2-2.fc39.noarch 188/190 Verifying : xz-devel-5.4.4-1.fc39.x86_64 189/190 Verifying : zlib-devel-1.2.13-4.fc39.x86_64 190/190 Installed products updated. 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kernel-headers-6.5.0-0.rc6.git0.1.fc39.x86_64 libICE-1.0.10-11.fc39.x86_64 libRmath-4.3.1-3.fc39.x86_64 libRmath-devel-4.3.1-3.fc39.x86_64 libSM-1.2.3-13.fc39.x86_64 libX11-1.8.6-2.fc39.x86_64 libX11-common-1.8.6-2.fc39.noarch libX11-devel-1.8.6-2.fc39.x86_64 libX11-xcb-1.8.6-2.fc39.x86_64 libXau-1.0.11-3.fc39.x86_64 libXau-devel-1.0.11-3.fc39.x86_64 libXcomposite-0.4.5-10.fc39.x86_64 libXext-1.3.5-3.fc39.x86_64 libXft-2.3.8-3.fc39.x86_64 libXft-devel-2.3.8-3.fc39.x86_64 libXi-1.8.1-2.fc39.x86_64 libXmu-1.1.4-3.fc39.x86_64 libXrender-0.9.11-3.fc39.x86_64 libXrender-devel-0.9.11-3.fc39.x86_64 libXt-1.2.1-5.fc39.x86_64 libXtst-1.2.4-3.fc39.x86_64 libb2-0.98.1-9.fc39.x86_64 libblkid-devel-2.39.1-3.fc39.x86_64 libdatrie-0.2.13-7.fc39.x86_64 libffi-devel-3.4.4-4.fc39.x86_64 libfontenc-1.1.6-3.fc39.x86_64 libgfortran-13.2.1-1.fc39.x86_64 libicu-73.2-2.fc39.x86_64 libicu-devel-73.2-2.fc39.x86_64 libjpeg-turbo-2.1.4-3.fc39.x86_64 libmount-devel-2.39.1-3.fc39.x86_64 libmpc-1.3.1-3.fc39.x86_64 libpng-2:1.6.37-15.fc39.x86_64 libpng-devel-2:1.6.37-15.fc39.x86_64 libquadmath-13.2.1-1.fc39.x86_64 libquadmath-devel-13.2.1-1.fc39.x86_64 libselinux-devel-3.5-5.fc39.x86_64 libsepol-devel-3.5-2.fc39.x86_64 libstdc++-devel-13.2.1-1.fc39.x86_64 libthai-0.1.29-6.fc39.x86_64 libtiff-4.4.0-7.fc39.x86_64 libtirpc-devel-1.3.3-1.rc2.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libwebp-1.3.1-2.fc39.x86_64 libxcb-1.13.1-12.fc39.x86_64 libxcb-devel-1.13.1-12.fc39.x86_64 libxcrypt-devel-4.4.36-2.fc39.x86_64 libxml2-devel-2.10.4-3.fc39.x86_64 lksctp-tools-1.0.19-4.fc39.x86_64 lua-5.4.6-3.fc39.x86_64 lua-posix-36.2.1-3.fc39.x86_64 make-1:4.4.1-2.fc39.x86_64 mkfontscale-1.2.2-4.fc39.x86_64 mpdecimal-2.5.1-7.fc39.x86_64 nettle-3.9.1-2.fc39.x86_64 nspr-4.35.0-11.fc39.x86_64 nss-3.92.0-1.fc39.x86_64 nss-softokn-3.92.0-1.fc39.x86_64 nss-softokn-freebl-3.92.0-1.fc39.x86_64 nss-sysinit-3.92.0-1.fc39.x86_64 nss-util-3.92.0-1.fc39.x86_64 openblas-0.3.21-6.fc39.x86_64 openblas-openmp-0.3.21-6.fc39.x86_64 openblas-openmp64-0.3.21-6.fc39.x86_64 pango-1.51.0-1.fc39.x86_64 pcre2-devel-10.42-1.fc39.2.x86_64 pcre2-utf16-10.42-1.fc39.2.x86_64 pcre2-utf32-10.42-1.fc39.2.x86_64 pixman-0.42.2-2.fc39.x86_64 python-pip-wheel-23.2.1-1.fc39.noarch python3-3.12.0~rc1-1.fc39.x86_64 python3-libs-3.12.0~rc1-1.fc39.x86_64 python3-setuptools-67.7.2-5.fc39.noarch suitesparse-5.13.0-3.fc39.x86_64 sysprof-capture-devel-3.48.0-2.fc39.x86_64 tcl-1:8.6.12-5.fc39.x86_64 tcl-devel-1:8.6.12-5.fc39.x86_64 tk-1:8.6.12-5.fc39.x86_64 tk-devel-1:8.6.12-5.fc39.x86_64 tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 ttmkfdir-3.0.9-69.fc39.x86_64 tzdata-java-2023c-2.fc39.noarch xdg-utils-1.1.3-14.fc39.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-Type1-7.5-36.fc39.noarch xorg-x11-proto-devel-2023.2-2.fc39.noarch xz-devel-5.4.4-1.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 Complete! Finish: build setup for R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm Start: rpmbuild R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.2dIf9A + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf cytometree + /usr/bin/mkdir -p cytometree + cd cytometree + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/cytometree_2.0.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/cytometree-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/cytometree-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ya8v82 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cytometree + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Q5UEbw + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd cytometree + mkdir -p /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64/usr/local/lib/R/library cytometree * installing *source* package 'cytometree' ... ** package 'cytometree' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)' g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c FmeasureC.cpp -o FmeasureC.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cytometree.so FmeasureC.o RcppExports.o -lflexiblas -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64/usr/local/lib/R/library/00LOCK-cytometree/00new/cytometree/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'cytometree' finding HTML links ... done Annotation html AsinhTransformation html BiexpTransformation html BinaryTree html CytEM html CytofEM html CytofTree html Cytof_BinaryTree html CytomeTree html DLBCL html FmeasureC html FmeasureC_no0 html GaussMix html GaussMix2 html HIPC html IMdata html KmeansOPT html LeavesCenters html LeavesMedians html Log10Transformation html Partition2gr html Partition3gr html RetrievePops html TreeAnnot html bootstrapCI html cytometree-package html plot_cytopop html plot_graph html plot_nodes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cytometree) + test -d cytometree/src + cd cytometree/src + rm -f FmeasureC.o RcppExports.o cytometree.so + rm -f /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64/usr/local/lib/R/library/R.css + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.0.2-3.fc39.copr6293730 --unique-debug-suffix -2.0.2-3.fc39.copr6293730.x86_64 --unique-debug-src-base R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/cytometree find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 9 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 Provides: R-CRAN-cytometree = 2.0.2-3.fc39.copr6293730 R-CRAN-cytometree(x86-64) = 2.0.2-3.fc39.copr6293730 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-cytometree-debugsource-2.0.2-3.fc39.copr6293730.x86_64 Provides: R-CRAN-cytometree-debugsource = 2.0.2-3.fc39.copr6293730 R-CRAN-cytometree-debugsource(x86-64) = 2.0.2-3.fc39.copr6293730 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-cytometree-debuginfo-2.0.2-3.fc39.copr6293730.x86_64 Provides: R-CRAN-cytometree-debuginfo = 2.0.2-3.fc39.copr6293730 R-CRAN-cytometree-debuginfo(x86-64) = 2.0.2-3.fc39.copr6293730 debuginfo(build-id) = 2de80495609748545cb365023cff18818a9e6ee6 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-cytometree-debugsource(x86-64) = 2.0.2-3.fc39.copr6293730 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-cytometree-debuginfo-2.0.2-3.fc39.copr6293730.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-cytometree-debugsource-2.0.2-3.fc39.copr6293730.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.BFRYuW + umask 022 + cd /builddir/build/BUILD + cd cytometree + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.TdOZtW + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/cytometree-SPECPARTS + rm -rf cytometree cytometree.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm Finish: build phase for R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1692173985.069351/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-cytometree-2.0.2-3.fc39.copr6293730.src.rpm) Config(child) 0 minutes 41 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool