getCMfromBP {sim1000G} | R Documentation |
Converts centimorgan position to base-pair. Return a list of centimorgan positions that correspond to the bp vector (in basepairs).
getCMfromBP(bp)
bp |
vector of base-pair positions |
library("sim1000G")
examples_dir = system.file("examples", package = "sim1000G")
vcf_file = sprintf("%s/region.vcf.gz", examples_dir)
vcf = readVCF( vcf_file, maxNumberOfVariants = 100,
min_maf = 0.12)
# For realistic data use the function downloadGeneticMap
generateUniformGeneticMap()
getCMfromBP(seq(1e6,100e6,by=1e6))