compare_biclusters {biclustermd} | R Documentation |
Compare two biclusterings or a pair of partition matrices
compare_biclusters(bc1, bc2)
bc1 |
the first biclustering or partition matrix. Must be either of class
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bc2 |
the second biclustering or partition matrix. Must be either of class
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If comparing a pair of biclusterings, a list containing the column similarity indices and the row similarity indices, in that order. If a pair of matrices, a vector of similarity indices.
data("synthetic")
bc <- biclustermd(synthetic, col_clusters = 3, row_clusters = 2)
bc2 <- biclustermd(synthetic, col_clusters = 3, row_clusters = 2)
# compare the two biclusterings
compare_biclusters(bc, bc2)
# determine the similarity between initial and final row clusterings
compare_biclusters(bc$Q0, bc$Q)