blast_parser {Plasmidprofiler} | R Documentation |
Loads the imported blast results, extracts desired columns, Create new column of ratio between hit length to query length - higher as denominator, adjusts pID by this ratio. Any AMR results are removed from the returned df.
blast_parser(blast.results)
blast.results |
Blast results loaded from read_blast or Global Env |
Blast table with pID adjusted by ratio of hit length to query length (larger as denominator)
## Not run:
blast_parser(blastdata)
## End(Not run)