mock_predict_topology {pureseqtmr} | R Documentation |
Uses predict_topology for doing a real prediction
mock_predict_topology(fasta_filename)
fasta_filename |
path to a FASTA file |
a tibble with the columns 'name' and 'topology', where the 'name' column hold all the proteins' names, and 'topology' contains all respective topologies.
Richèl J.C. Bilderbeek
fasta_filename <- tempfile()
save_tibble_as_fasta_file(
t = tibble::tibble(
name = c("A", "B"),
sequence = c("FAMILYVW", "VWFAMILY")
),
fasta_filename = fasta_filename
)
mock_predict_topology(fasta_filename)