inspect_sample_elements {metaprotr} | R Documentation |
Displays a graph that indicates the number of common elements from a "spectral_count_object" (peptides, subgroups, groups or taxonomic entities) per sample. This function is useful to distinguish heterogeneity between samples in an experimental design.
inspect_sample_elements(spectral_count_object, force = FALSE)
spectral_count_object |
List defined as "spectral_count_object" containing dataframes with abundance expressed as spectral counts. The spectral data can be organized by peptides, subgroups, groups or taxonomic levels. |
force |
Logic value set at FALSE by default in order to ask permission to create a pdf file in the workstation of the user. |
Barplots (pdf) ilustrating the common spectral elements (peptides, subgroups, groups, taxonomic elements) per sample in a "spectral_count_object".
data(fecal_waters)
inspect_sample_elements(fecal_waters)