%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  merror
%global packver   3.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          3.0
Release:          1%{?dist}%{?buildtag}
Summary:          Accuracy and Precision of Measurements

License:          GPL (>= 2)
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel
Requires:         R-core
BuildArch:        noarch
BuildRequires:    R-graphics 
BuildRequires:    R-grDevices 
BuildRequires:    R-stats 
BuildRequires:    R-utils 
BuildRequires:    R-CRAN-OpenMx 
Requires:         R-graphics 
Requires:         R-grDevices 
Requires:         R-stats 
Requires:         R-utils 
Requires:         R-CRAN-OpenMx 

%description
N>=3 methods are used to measure each of n items. The data are used to
estimate simultaneously systematic error (bias) and random error
(imprecision). Observed measurements for each method or device are assumed
to be linear functions of the unknown true values and the errors are
assumed normally distributed. Pairwise calibration curves and plots can be
easily generated. Unlike the 'ncb.od' function, the 'omx' function builds
a one-factor measurement error model using 'OpenMx' and allows missing
values, uses full information maximum likelihood to estimate parameters,
and provides both likelihood-based and bootstrapped confidence intervals
for all parameters, in addition to Wald-type intervals.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}