getLDsets {qgg} | R Documentation |
Extracts marker LD sets based on a sparse LD matrix stored in the Glist object.
getLDsets(Glist = NULL, chr = NULL, r2 = 0.5)
Glist |
A list structure containing information about genotypes stored on disk. |
chr |
A numeric value specifying the chromosome for which LD sets are to be extracted. |
r2 |
A numeric threshold, defaulting to 0.5, used for extracting LD sets. |