Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c18a' (ED25519) to the list of known hosts. cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading psqn_0.3.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o psqn_0.3.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-psqn/psqn_0.3.1.tar.gz/md5/696c0cf9c266eb547cff9b238f90a081/psqn_0.3.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 180k 100 180k 0 0 2423k 0 --:--:-- --:--:-- --:--:-- 2436k INFO: Reading stdout from command: md5sum psqn_0.3.1.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn/R-CRAN-psqn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1700309121.826828 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn/R-CRAN-psqn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1700309121.826828 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn/R-CRAN-psqn.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.2 INFO: Mock Version: 5.2 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1700309121.826828/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 5.0 kB/s | 1.5 kB 00:00 Copr repository 46 MB/s | 25 MB 00:00 fedora 480 kB/s | 23 kB 00:00 updates 280 kB/s | 12 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.21-1.fc39 updates 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-4.fc39 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-30 fedora 18 k findutils x86_64 1:4.9.0-5.fc39 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-10.fc39 updates 70 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 262-1.fc39 fedora 84 k rpm-build x86_64 4.19.0-1.fc39 fedora 78 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-2.fc39 updates 1.3 M tar x86_64 2:1.35-2.fc39 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.2-1.fc39 fedora 1.2 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 3.1.2-4.fc39 fedora 117 k authselect x86_64 1.4.3-1.fc39 fedora 149 k authselect-libs x86_64 1.4.3-1.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-13.fc39 fedora 5.6 M binutils-gold x86_64 2.40-13.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 fedora 837 k coreutils-common x86_64 9.3-4.fc39 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20231113-1.gitb402e82.fc39 updates 99 k curl x86_64 8.2.1-3.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-10.fc39 fedora 77 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.190-1.fc39 updates 550 k elfutils-debuginfod-client x86_64 0.190-1.fc39 updates 38 k elfutils-default-yama-scope noarch 0.190-1.fc39 updates 14 k elfutils-libelf x86_64 0.190-1.fc39 updates 195 k elfutils-libs x86_64 0.190-1.fc39 updates 260 k fedora-gpg-keys noarch 39-1 fedora 130 k fedora-release noarch 39-30 fedora 8.1 k fedora-release-identity-basic noarch 39-30 fedora 8.9 k fedora-repos noarch 39-1 fedora 9.3 k file x86_64 5.44-5.fc39 fedora 49 k file-libs x86_64 5.44-5.fc39 fedora 729 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 13.2-10.fc39 updates 4.2 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-10.fc39 updates 2.1 M glibc-common x86_64 2.38-10.fc39 updates 349 k glibc-gconv-extra x86_64 2.38-10.fc39 updates 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.3.1-1.fc39 updates 28 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21.2-2.fc39 updates 764 k libacl x86_64 2.3.1-8.fc39 fedora 23 k libarchive x86_64 3.7.1-1.fc39 fedora 408 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.2-1.fc39 fedora 116 k libbrotli x86_64 1.1.0-1.fc39 fedora 336 k libcap x86_64 2.48-7.fc39 fedora 68 k libcap-ng x86_64 0.8.3-8.fc39 fedora 32 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-3.fc39 fedora 323 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.5.2-1.fc39 fedora 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.2-1.fc39 fedora 162 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-4.fc39 updates 111 k libgomp x86_64 13.2.1-4.fc39 updates 320 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.2-1.fc39 fedora 155 k libnghttp2 x86_64 1.55.1-4.fc39 updates 76 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-6.fc39 fedora 120 k libselinux x86_64 3.5-5.fc39 fedora 87 k libsemanage x86_64 3.5-4.fc39 fedora 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.2-1.fc39 fedora 67 k libssh x86_64 0.10.5-2.fc39 fedora 211 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ x86_64 13.2.1-4.fc39 updates 862 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.4-0.fc39 updates 94 k libunistring x86_64 1.1-5.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.2-1.fc39 fedora 28 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.10.4-3.fc39 fedora 701 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-7.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-4.fc39 fedora 2.2 M p11-kit x86_64 0.25.2-1.fc39 updates 520 k p11-kit-trust x86_64 0.25.2-1.fc39 updates 142 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-3.fc39 updates 542 k pam-libs x86_64 1.5.3-3.fc39 updates 56 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20230812-1.fc39 fedora 57 k pyproject-srpm-macros noarch 1.10.0-1.fc39 updates 14 k python-srpm-macros noarch 3.12-4.fc39 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc39 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc39 updates 8.6 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.19.0-1.fc39 fedora 538 k rpm-build-libs x86_64 4.19.0-1.fc39 fedora 96 k rpm-libs x86_64 4.19.0-1.fc39 fedora 312 k rpm-sequoia x86_64 1.5.0-1.fc39 fedora 871 k rpmautospec-rpm-macros noarch 0.3.5-4.fc39 fedora 8.8 k rust-srpm-macros noarch 25.2-2.fc39 updates 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.5-2.fc39 fedora 689 k util-linux-core x86_64 2.39.2-1.fc39 fedora 494 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 151 Packages Total size: 52 M Installed size: 178 M Downloading Packages: [SKIPPED] alternatives-1.25-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-4.fc39.x86_64.rpm: Already downloaded [SKIPPED] authselect-1.4.3-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.3-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] binutils-2.40-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.40-13.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.x86_64.rpm: Already 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qt5-srpm-macros-5.15.11-1.fc39.noarch.rpm: Already downloaded [SKIPPED] qt6-srpm-macros-6.6.0-1.fc39.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-25.2-2.fc39.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.14.0-2.fc39.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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54/151 Verifying : libeconf-0.5.2-1.fc39.x86_64 55/151 Verifying : libevent-2.1.12-9.fc39.x86_64 56/151 Verifying : libfdisk-2.39.2-1.fc39.x86_64 57/151 Verifying : libffi-3.4.4-4.fc39.x86_64 58/151 Verifying : libidn2-2.3.4-3.fc39.x86_64 59/151 Verifying : libmount-2.39.2-1.fc39.x86_64 60/151 Verifying : libnsl2-2.0.0-6.fc39.x86_64 61/151 Verifying : libpkgconf-1.9.5-2.fc39.x86_64 62/151 Verifying : libpsl-0.21.2-4.fc39.x86_64 63/151 Verifying : libpwquality-1.4.5-6.fc39.x86_64 64/151 Verifying : libselinux-3.5-5.fc39.x86_64 65/151 Verifying : libsemanage-3.5-4.fc39.x86_64 66/151 Verifying : libsepol-3.5-2.fc39.x86_64 67/151 Verifying : libsigsegv-2.14-5.fc39.x86_64 68/151 Verifying : libsmartcols-2.39.2-1.fc39.x86_64 69/151 Verifying : libssh-0.10.5-2.fc39.x86_64 70/151 Verifying : libssh-config-0.10.5-2.fc39.noarch 71/151 Verifying : libtasn1-4.19.0-3.fc39.x86_64 72/151 Verifying : libunistring-1.1-5.fc39.x86_64 73/151 Verifying : libutempter-1.2.1-10.fc39.x86_64 74/151 Verifying : libuuid-2.39.2-1.fc39.x86_64 75/151 Verifying : libverto-0.3.2-6.fc39.x86_64 76/151 Verifying : libxcrypt-4.4.36-2.fc39.x86_64 77/151 Verifying : libxml2-2.10.4-3.fc39.x86_64 78/151 Verifying : libzstd-1.5.5-4.fc39.x86_64 79/151 Verifying : lua-libs-5.4.6-3.fc39.x86_64 80/151 Verifying : lua-srpm-macros-1-9.fc39.noarch 81/151 Verifying : lz4-libs-1.9.4-4.fc39.x86_64 82/151 Verifying : mpfr-4.2.0-3.fc39.x86_64 83/151 Verifying : ncurses-base-6.4-7.20230520.fc39.noarch 84/151 Verifying : ncurses-libs-6.4-7.20230520.fc39.x86_64 85/151 Verifying : ocaml-srpm-macros-8-2.fc39.noarch 86/151 Verifying : openblas-srpm-macros-2-14.fc39.noarch 87/151 Verifying : openldap-2.6.6-1.fc39.x86_64 88/151 Verifying : openssl-libs-1:3.1.1-4.fc39.x86_64 89/151 Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 90/151 Verifying : patch-2.7.6-22.fc39.x86_64 91/151 Verifying : pcre2-10.42-1.fc39.2.x86_64 92/151 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 93/151 Verifying : perl-srpm-macros-1-51.fc39.noarch 94/151 Verifying : pkgconf-1.9.5-2.fc39.x86_64 95/151 Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 96/151 Verifying : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 97/151 Verifying : popt-1.19-3.fc39.x86_64 98/151 Verifying : publicsuffix-list-dafsa-20230812-1.fc39.noarch 99/151 Verifying : python-srpm-macros-3.12-4.fc39.noarch 100/151 Verifying : readline-8.2-4.fc39.x86_64 101/151 Verifying : redhat-rpm-config-262-1.fc39.noarch 102/151 Verifying : rpm-4.19.0-1.fc39.x86_64 103/151 Verifying : rpm-build-4.19.0-1.fc39.x86_64 104/151 Verifying : rpm-build-libs-4.19.0-1.fc39.x86_64 105/151 Verifying : rpm-libs-4.19.0-1.fc39.x86_64 106/151 Verifying : rpm-sequoia-1.5.0-1.fc39.x86_64 107/151 Verifying : rpmautospec-rpm-macros-0.3.5-4.fc39.noarch 108/151 Verifying : sed-4.8-14.fc39.x86_64 109/151 Verifying : setup-2.14.4-1.fc39.noarch 110/151 Verifying : sqlite-libs-3.42.0-7.fc39.x86_64 111/151 Verifying : systemd-libs-254.5-2.fc39.x86_64 112/151 Verifying : tar-2:1.35-2.fc39.x86_64 113/151 Verifying : unzip-6.0-62.fc39.x86_64 114/151 Verifying : util-linux-2.39.2-1.fc39.x86_64 115/151 Verifying : util-linux-core-2.39.2-1.fc39.x86_64 116/151 Verifying : which-2.21-40.fc39.x86_64 117/151 Verifying : xxhash-libs-0.8.2-1.fc39.x86_64 118/151 Verifying : xz-5.4.4-1.fc39.x86_64 119/151 Verifying : xz-libs-5.4.4-1.fc39.x86_64 120/151 Verifying : zip-3.0-39.fc39.x86_64 121/151 Verifying : zlib-1.2.13-4.fc39.x86_64 122/151 Verifying : zstd-1.5.5-4.fc39.x86_64 123/151 Verifying : bash-5.2.21-1.fc39.x86_64 124/151 Verifying : crypto-policies-20231113-1.gitb402e82.fc39.noarc 125/151 Verifying : elfutils-0.190-1.fc39.x86_64 126/151 Verifying : elfutils-debuginfod-client-0.190-1.fc39.x86_64 127/151 Verifying : elfutils-default-yama-scope-0.190-1.fc39.noarch 128/151 Verifying : elfutils-libelf-0.190-1.fc39.x86_64 129/151 Verifying : elfutils-libs-0.190-1.fc39.x86_64 130/151 Verifying : gdb-minimal-13.2-10.fc39.x86_64 131/151 Verifying : glibc-2.38-10.fc39.x86_64 132/151 Verifying : glibc-common-2.38-10.fc39.x86_64 133/151 Verifying : glibc-gconv-extra-2.38-10.fc39.x86_64 134/151 Verifying : glibc-minimal-langpack-2.38-10.fc39.x86_64 135/151 Verifying : go-srpm-macros-3.3.1-1.fc39.noarch 136/151 Verifying : krb5-libs-1.21.2-2.fc39.x86_64 137/151 Verifying : libgcc-13.2.1-4.fc39.x86_64 138/151 Verifying : libgomp-13.2.1-4.fc39.x86_64 139/151 Verifying : libnghttp2-1.55.1-4.fc39.x86_64 140/151 Verifying : libstdc++-13.2.1-4.fc39.x86_64 141/151 Verifying : libtirpc-1.3.4-0.fc39.x86_64 142/151 Verifying : p11-kit-0.25.2-1.fc39.x86_64 143/151 Verifying : p11-kit-trust-0.25.2-1.fc39.x86_64 144/151 Verifying : pam-1.5.3-3.fc39.x86_64 145/151 Verifying : pam-libs-1.5.3-3.fc39.x86_64 146/151 Verifying : pyproject-srpm-macros-1.10.0-1.fc39.noarch 147/151 Verifying : qt5-srpm-macros-5.15.11-1.fc39.noarch 148/151 Verifying : qt6-srpm-macros-6.6.0-1.fc39.noarch 149/151 Verifying : rust-srpm-macros-25.2-2.fc39.noarch 150/151 Verifying : shadow-utils-2:4.14.0-2.fc39.x86_64 151/151 Installed products updated. Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231113-1.gitb402e82.fc39.noarch curl-8.2.1-3.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-1.fc39.x86_64 elfutils-debuginfod-client-0.190-1.fc39.x86_64 elfutils-default-yama-scope-0.190-1.fc39.noarch elfutils-libelf-0.190-1.fc39.x86_64 elfutils-libs-0.190-1.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-30.noarch fedora-release-common-39-30.noarch fedora-release-identity-basic-39-30.noarch fedora-repos-39-1.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-5.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-10.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-10.fc39.x86_64 glibc-common-2.38-10.fc39.x86_64 glibc-gconv-extra-2.38-10.fc39.x86_64 glibc-minimal-langpack-2.38-10.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.2-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-3.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-4.fc39.x86_64 libgomp-13.2.1-4.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-4.fc39.x86_64 p11-kit-0.25.2-1.fc39.x86_64 p11-kit-trust-0.25.2-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.10.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.0-1.fc39.x86_64 rpm-build-4.19.0-1.fc39.x86_64 rpm-build-libs-4.19.0-1.fc39.x86_64 rpm-libs-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.5-2.fc39.x86_64 tar-2:1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc39.x86_64 util-linux-core-2.39.2-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231113-1.gitb402e82.fc39.noarch curl-8.2.1-3.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-1.fc39.x86_64 elfutils-debuginfod-client-0.190-1.fc39.x86_64 elfutils-default-yama-scope-0.190-1.fc39.noarch elfutils-libelf-0.190-1.fc39.x86_64 elfutils-libs-0.190-1.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-30.noarch fedora-release-common-39-30.noarch fedora-release-identity-basic-39-30.noarch fedora-repos-39-1.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-5.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-10.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-10.fc39.x86_64 glibc-common-2.38-10.fc39.x86_64 glibc-gconv-extra-2.38-10.fc39.x86_64 glibc-minimal-langpack-2.38-10.fc39.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.2-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-3.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-4.fc39.x86_64 libgomp-13.2.1-4.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-3.1.1-4.fc39.x86_64 p11-kit-0.25.2-1.fc39.x86_64 p11-kit-trust-0.25.2-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.10.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.0-1.fc39.x86_64 rpm-build-4.19.0-1.fc39.x86_64 rpm-build-libs-4.19.0-1.fc39.x86_64 rpm-libs-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.3.5-4.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.5-2.fc39.x86_64 tar-1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc39.x86_64 util-linux-core-2.39.2-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-oip9t625/R-CRAN-psqn/R-CRAN-psqn.spec) Config(child) 0 minutes 21 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm) Config(fedora-39-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1700309121.826828/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.18.1-3.fc38.x86_64 rpm-sequoia-1.4.0-3.fc38.x86_64 python3-dnf-4.18.1-1.fc38.noarch python3-dnf-plugins-core-4.4.3-1.fc38.noarch yum-4.18.1-1.fc38.noarch Start: build phase for R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm Start: build setup for R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 16 kB/s | 1.5 kB 00:00 Copr repository 7.7 MB/s | 25 MB 00:03 fedora 517 kB/s | 23 kB 00:00 updates 274 kB/s | 12 kB 00:00 Dependencies resolved. ======================================================================================== Package Arch Version Repo Size ======================================================================================== Installing: R-CRAN-Matrix x86_64 1.6.3-1.fc39.copr6636945 copr_base 4.1 M R-CRAN-Rcpp x86_64 1.0.11-1.fc39.copr6279302 copr_base 2.0 M R-CRAN-RcppEigen x86_64 0.3.3.9.4-1.fc39.copr6596539 copr_base 1.2 M R-CRAN-testthat x86_64 3.2.0-1.fc39.copr6501172 copr_base 1.7 M R-devel x86_64 4.3.2-1.fc39 updates 10 k Installing dependencies: R-CRAN-R6 noarch 2.5.1-1.fc39.copr6279323 copr_base 96 k R-CRAN-brio x86_64 1.1.3-1.fc39.copr6281913 copr_base 47 k R-CRAN-callr noarch 3.7.3-1.fc39.copr6285212 copr_base 433 k R-CRAN-cli x86_64 3.6.1-1.fc39.copr6279347 copr_base 1.3 M R-CRAN-crayon noarch 1.5.2-1.fc39.copr6279327 copr_base 182 k R-CRAN-desc noarch 1.4.2-1.fc39.copr6282874 copr_base 353 k R-CRAN-diffobj x86_64 0.3.5-1.fc39.copr6282940 copr_base 998 k R-CRAN-digest x86_64 0.6.33-1.fc39.copr6279309 copr_base 216 k R-CRAN-ellipsis x86_64 0.3.2-1.fc39.copr6282869 copr_base 49 k R-CRAN-evaluate noarch 0.23-1.fc39.copr6589765 copr_base 97 k R-CRAN-fansi x86_64 1.0.5-1.fc39.copr6506680 copr_base 339 k R-CRAN-fs x86_64 1.6.3-1.fc39.copr6279390 copr_base 312 k R-CRAN-glue x86_64 1.6.2-1.fc39.copr6279303 copr_base 162 k R-CRAN-jsonlite x86_64 1.8.7-1.fc39.copr6279319 copr_base 637 k R-CRAN-lattice x86_64 0.22.5-1.fc39.copr6562879 copr_base 1.4 M R-CRAN-lifecycle noarch 1.0.4-1.fc39.copr6614518 copr_base 130 k R-CRAN-magrittr x86_64 2.0.3-1.fc39.copr6279321 copr_base 222 k R-CRAN-pillar noarch 1.9.0-1.fc39.copr6286818 copr_base 626 k R-CRAN-pkgbuild noarch 1.4.2-1.fc39.copr6286816 copr_base 203 k R-CRAN-pkgconfig noarch 2.0.3-3.fc39.copr6279322 copr_base 30 k R-CRAN-pkgload noarch 1.3.3-1.fc39.copr6437975 copr_base 199 k R-CRAN-praise noarch 1.0.0-3.fc39.copr6279431 copr_base 28 k R-CRAN-prettyunits noarch 1.2.0-1.fc39.copr6439833 copr_base 168 k R-CRAN-processx x86_64 3.8.2-1.fc39.copr6282868 copr_base 356 k R-CRAN-ps x86_64 1.7.5-1.fc39.copr6279341 copr_base 338 k R-CRAN-rematch2 noarch 2.1.2-3.fc39.copr6290080 copr_base 59 k R-CRAN-rlang x86_64 1.1.2-1.fc39.copr6598950 copr_base 1.6 M R-CRAN-rprojroot noarch 2.0.4-1.fc39.copr6601156 copr_base 120 k R-CRAN-tibble x86_64 3.2.1-1.fc39.copr6288598 copr_base 632 k R-CRAN-utf8 x86_64 1.2.4-1.fc39.copr6555966 copr_base 150 k R-CRAN-vctrs x86_64 0.6.4-1.fc39.copr6524681 copr_base 1.3 M R-CRAN-waldo noarch 0.5.2-1.fc39.copr6596563 copr_base 114 k R-CRAN-withr noarch 2.5.2-1.fc39.copr6583488 copr_base 255 k R-core x86_64 4.3.2-1.fc39 updates 64 M R-core-devel x86_64 4.3.2-1.fc39 updates 93 k R-java x86_64 4.3.2-1.fc39 updates 11 k R-java-devel x86_64 4.3.2-1.fc39 updates 10 k R-littler x86_64 0.3.18-4.fc39 fedora 76 k R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k alsa-lib x86_64 1.2.10-3.fc39 fedora 522 k annobin-docs noarch 12.30-1.fc39 updates 92 k annobin-plugin-gcc x86_64 12.30-1.fc39 updates 959 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k brotli x86_64 1.1.0-1.fc39 fedora 20 k brotli-devel x86_64 1.1.0-1.fc39 fedora 34 k bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cairo x86_64 1.18.0-1.fc39 fedora 710 k cmake-filesystem x86_64 3.27.7-1.fc39 fedora 19 k copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k cpp x86_64 13.2.1-4.fc39 updates 11 M crypto-policies-scripts noarch 20231113-1.gitb402e82.fc39 updates 117 k cups-libs x86_64 1:2.4.7-2.fc39 updates 269 k dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-9.fc39 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.1-2.fc39 fedora 7.1 k expat x86_64 2.5.0-3.fc39 fedora 110 k flexiblas x86_64 3.3.1-5.fc39 fedora 33 k flexiblas-devel x86_64 3.3.1-5.fc39 fedora 117 k flexiblas-netlib x86_64 3.3.1-5.fc39 fedora 3.1 M flexiblas-netlib64 x86_64 3.3.1-5.fc39 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc39 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.3.1-5.fc39 fedora 17 k fontconfig x86_64 2.14.2-5.fc39 fedora 297 k fontconfig-devel x86_64 2.14.2-5.fc39 fedora 165 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k freetype-devel x86_64 2.13.1-2.fc39 fedora 950 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc x86_64 13.2.1-4.fc39 updates 34 M gcc-c++ x86_64 13.2.1-4.fc39 updates 13 M gcc-gfortran x86_64 13.2.1-4.fc39 updates 12 M gcc-plugin-annobin x86_64 13.2.1-4.fc39 updates 48 k gettext x86_64 0.22-2.fc39 fedora 1.1 M gettext-envsubst x86_64 0.22-2.fc39 fedora 36 k gettext-libs x86_64 0.22-2.fc39 fedora 328 k gettext-runtime x86_64 0.22-2.fc39 fedora 120 k glib2 x86_64 2.78.1-1.fc39 updates 2.8 M glib2-devel x86_64 2.78.1-1.fc39 updates 595 k glibc-devel x86_64 2.38-10.fc39 updates 85 k glibc-headers-x86 noarch 2.38-10.fc39 updates 568 k gnutls x86_64 3.8.1-1.fc39 fedora 1.1 M google-noto-fonts-common noarch 20230801-4.fc39 updates 17 k google-noto-sans-vf-fonts noarch 20230801-4.fc39 updates 583 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphite2-devel x86_64 1.3.14-12.fc39 fedora 20 k guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M harfbuzz x86_64 8.2.1-2.fc39 fedora 975 k harfbuzz-devel x86_64 8.2.1-2.fc39 fedora 450 k harfbuzz-icu x86_64 8.2.1-2.fc39 fedora 17 k java-17-openjdk x86_64 1:17.0.8.0.7-1.fc39 fedora 407 k java-17-openjdk-devel x86_64 1:17.0.8.0.7-1.fc39 fedora 4.7 M java-17-openjdk-headless x86_64 1:17.0.8.0.7-1.fc39 fedora 44 M javapackages-filesystem noarch 6.1.0-10.fc39 fedora 12 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k kernel-headers x86_64 6.5.4-300.fc39 fedora 1.5 M libICE x86_64 1.0.10-11.fc39 fedora 70 k libRmath x86_64 4.3.2-1.fc39 updates 122 k libRmath-devel x86_64 4.3.2-1.fc39 updates 16 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.7-1.fc39 fedora 650 k libX11-common noarch 1.8.7-1.fc39 fedora 176 k libX11-devel x86_64 1.8.7-1.fc39 fedora 1.0 M libX11-xcb x86_64 1.8.7-1.fc39 fedora 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXau-devel x86_64 1.0.11-3.fc39 fedora 14 k libXcomposite x86_64 0.4.5-10.fc39 fedora 23 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXft-devel x86_64 2.3.8-3.fc39 fedora 50 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXmu x86_64 1.1.4-3.fc39 fedora 76 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXrender-devel x86_64 0.9.11-3.fc39 fedora 19 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXtst x86_64 1.2.4-3.fc39 fedora 20 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libblkid-devel x86_64 2.39.2-1.fc39 fedora 18 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libffi-devel x86_64 3.4.4-4.fc39 fedora 29 k libfontenc x86_64 1.1.6-3.fc39 fedora 32 k libgfortran x86_64 13.2.1-4.fc39 updates 900 k libicu x86_64 73.2-2.fc39 fedora 11 M libicu-devel x86_64 73.2-2.fc39 fedora 924 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k liblerc x86_64 4.0.0-4.fc39 fedora 201 k libmount-devel x86_64 2.39.2-1.fc39 fedora 18 k libmpc x86_64 1.3.1-3.fc39 fedora 70 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libpng-devel x86_64 2:1.6.37-15.fc39 fedora 291 k libquadmath x86_64 13.2.1-4.fc39 updates 196 k libquadmath-devel x86_64 13.2.1-4.fc39 updates 38 k libselinux-devel x86_64 3.5-5.fc39 fedora 151 k libsepol-devel x86_64 3.5-2.fc39 fedora 49 k libstdc++-devel x86_64 13.2.1-4.fc39 updates 2.6 M libthai x86_64 0.1.29-6.fc39 fedora 213 k libtiff x86_64 4.4.0-8.fc39 fedora 202 k libtirpc-devel x86_64 1.3.4-0.fc39 updates 125 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libwebp x86_64 1.3.2-2.fc39 fedora 284 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxcb-devel x86_64 1.13.1-12.fc39 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-2.fc39 fedora 30 k libxml2-devel x86_64 2.10.4-3.fc39 fedora 527 k lksctp-tools x86_64 1.0.19-4.fc39 fedora 92 k lua x86_64 5.4.6-3.fc39 fedora 191 k lua-posix x86_64 36.2.1-3.fc39 fedora 143 k make x86_64 1:4.4.1-2.fc39 fedora 589 k mkfontscale x86_64 1.2.2-4.fc39 fedora 32 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k nettle x86_64 3.9.1-2.fc39 fedora 425 k nspr x86_64 4.35.0-14.fc39 fedora 136 k nss x86_64 3.94.0-2.fc39 fedora 693 k nss-softokn x86_64 3.94.0-2.fc39 fedora 411 k nss-softokn-freebl x86_64 3.94.0-2.fc39 fedora 348 k nss-sysinit x86_64 3.94.0-2.fc39 fedora 18 k nss-util x86_64 3.94.0-2.fc39 fedora 87 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openblas-openmp64 x86_64 0.3.21-6.fc39 fedora 4.8 M pango x86_64 1.51.0-1.fc39 fedora 343 k pcre2-devel x86_64 10.42-1.fc39.2 fedora 505 k pcre2-utf16 x86_64 10.42-1.fc39.2 fedora 212 k pcre2-utf32 x86_64 10.42-1.fc39.2 fedora 200 k pixman x86_64 0.42.2-2.fc39 fedora 288 k python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M python3 x86_64 3.12.0-1.fc39 fedora 26 k python3-libs x86_64 3.12.0-1.fc39 fedora 9.2 M python3-setuptools noarch 67.7.2-7.fc39 fedora 1.5 M sysprof-capture-devel x86_64 45.1-1.fc39 updates 59 k tcl x86_64 1:8.6.12-5.fc39 fedora 1.1 M tcl-devel x86_64 1:8.6.12-5.fc39 fedora 169 k tk x86_64 1:8.6.12-5.fc39 fedora 1.6 M tk-devel x86_64 1:8.6.12-5.fc39 fedora 537 k tre x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 43 k tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k tre-devel x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k ttmkfdir x86_64 3.0.9-69.fc39 fedora 56 k tzdata noarch 2023c-2.fc39 fedora 717 k tzdata-java noarch 2023c-2.fc39 fedora 208 k xdg-utils noarch 1.1.3-15.fc39 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k xorg-x11-proto-devel noarch 2023.2-2.fc39 fedora 298 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Transaction Summary ======================================================================================== Install 193 Packages Total size: 288 M Total download size: 17 M Installed size: 897 M Downloading Packages: [SKIPPED] R-CRAN-Matrix-1.6.3-1.fc39.copr6636945.x86_64.rpm: Already downloaded [SKIPPED] R-CRAN-lattice-0.22.5-1.fc39.copr6562879.x86_64.rpm: Already downloaded [SKIPPED] R-rpm-macros-1.2.1-7.fc39.noarch.rpm: Already downloaded [SKIPPED] abattis-cantarell-vf-fonts-0.301-10.fc39.noarch.rpm: Already downloaded [SKIPPED] alsa-lib-1.2.10-3.fc39.x86_64.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-24.fc39.x86_64.rpm: Already downloaded [SKIPPED] brotli-1.1.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] brotli-devel-1.1.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] bzip2-devel-1.0.8-16.fc39.x86_64.rpm: Already downloaded [SKIPPED] cairo-1.18.0-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.27.7-1.fc39.x86_64.rpm: Already downloaded [SKIPPED] 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Running transaction Running scriptlet: copy-jdk-configs-4.1-3.fc39.noarch 1/1 Running scriptlet: java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86_64 1/1 Preparing : 1/1 Installing : zlib-devel-1.2.13-4.fc39.x86_64 1/193 Installing : libgfortran-13.2.1-4.fc39.x86_64 2/193 Installing : nspr-4.35.0-14.fc39.x86_64 3/193 Installing : nss-util-3.94.0-2.fc39.x86_64 4/193 Installing : libquadmath-13.2.1-4.fc39.x86_64 5/193 Installing : xorg-x11-proto-devel-2023.2-2.fc39.noarch 6/193 Installing : libpng-2:1.6.37-15.fc39.x86_64 7/193 Installing : libmpc-1.3.1-3.fc39.x86_64 8/193 Installing : tcl-1:8.6.12-5.fc39.x86_64 9/193 Installing : libicu-73.2-2.fc39.x86_64 10/193 Installing : fonts-filesystem-1:2.0.5-12.fc39.noarch 11/193 Installing : libicu-devel-73.2-2.fc39.x86_64 12/193 Installing : tcl-devel-1:8.6.12-5.fc39.x86_64 13/193 Installing : libRmath-4.3.2-1.fc39.x86_64 14/193 Installing : xz-devel-5.4.4-1.fc39.x86_64 15/193 Installing : openblas-0.3.21-6.fc39.x86_64 16/193 Installing : 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libXrender-0.9.11-3.fc39.x86_64 98/193 Verifying : libXrender-devel-0.9.11-3.fc39.x86_64 99/193 Verifying : libXt-1.2.1-5.fc39.x86_64 100/193 Verifying : libXtst-1.2.4-3.fc39.x86_64 101/193 Verifying : libb2-0.98.1-9.fc39.x86_64 102/193 Verifying : libblkid-devel-2.39.2-1.fc39.x86_64 103/193 Verifying : libdatrie-0.2.13-7.fc39.x86_64 104/193 Verifying : libffi-devel-3.4.4-4.fc39.x86_64 105/193 Verifying : libfontenc-1.1.6-3.fc39.x86_64 106/193 Verifying : libicu-73.2-2.fc39.x86_64 107/193 Verifying : libicu-devel-73.2-2.fc39.x86_64 108/193 Verifying : libjpeg-turbo-2.1.4-3.fc39.x86_64 109/193 Verifying : liblerc-4.0.0-4.fc39.x86_64 110/193 Verifying : libmount-devel-2.39.2-1.fc39.x86_64 111/193 Verifying : libmpc-1.3.1-3.fc39.x86_64 112/193 Verifying : libpng-2:1.6.37-15.fc39.x86_64 113/193 Verifying : libpng-devel-2:1.6.37-15.fc39.x86_64 114/193 Verifying : libselinux-devel-3.5-5.fc39.x86_64 115/193 Verifying : libsepol-devel-3.5-2.fc39.x86_64 116/193 Verifying : libthai-0.1.29-6.fc39.x86_64 117/193 Verifying : libtiff-4.4.0-8.fc39.x86_64 118/193 Verifying : libtool-ltdl-2.4.7-7.fc39.x86_64 119/193 Verifying : libwebp-1.3.2-2.fc39.x86_64 120/193 Verifying : libxcb-1.13.1-12.fc39.x86_64 121/193 Verifying : libxcb-devel-1.13.1-12.fc39.x86_64 122/193 Verifying : libxcrypt-devel-4.4.36-2.fc39.x86_64 123/193 Verifying : libxml2-devel-2.10.4-3.fc39.x86_64 124/193 Verifying : lksctp-tools-1.0.19-4.fc39.x86_64 125/193 Verifying : lua-5.4.6-3.fc39.x86_64 126/193 Verifying : lua-posix-36.2.1-3.fc39.x86_64 127/193 Verifying : make-1:4.4.1-2.fc39.x86_64 128/193 Verifying : mkfontscale-1.2.2-4.fc39.x86_64 129/193 Verifying : mpdecimal-2.5.1-7.fc39.x86_64 130/193 Verifying : nettle-3.9.1-2.fc39.x86_64 131/193 Verifying : nspr-4.35.0-14.fc39.x86_64 132/193 Verifying : nss-3.94.0-2.fc39.x86_64 133/193 Verifying : nss-softokn-3.94.0-2.fc39.x86_64 134/193 Verifying : nss-softokn-freebl-3.94.0-2.fc39.x86_64 135/193 Verifying : nss-sysinit-3.94.0-2.fc39.x86_64 136/193 Verifying : nss-util-3.94.0-2.fc39.x86_64 137/193 Verifying : openblas-0.3.21-6.fc39.x86_64 138/193 Verifying : openblas-openmp-0.3.21-6.fc39.x86_64 139/193 Verifying : openblas-openmp64-0.3.21-6.fc39.x86_64 140/193 Verifying : pango-1.51.0-1.fc39.x86_64 141/193 Verifying : pcre2-devel-10.42-1.fc39.2.x86_64 142/193 Verifying : pcre2-utf16-10.42-1.fc39.2.x86_64 143/193 Verifying : pcre2-utf32-10.42-1.fc39.2.x86_64 144/193 Verifying : pixman-0.42.2-2.fc39.x86_64 145/193 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 146/193 Verifying : python3-3.12.0-1.fc39.x86_64 147/193 Verifying : python3-libs-3.12.0-1.fc39.x86_64 148/193 Verifying : python3-setuptools-67.7.2-7.fc39.noarch 149/193 Verifying : tcl-1:8.6.12-5.fc39.x86_64 150/193 Verifying : tcl-devel-1:8.6.12-5.fc39.x86_64 151/193 Verifying : tk-1:8.6.12-5.fc39.x86_64 152/193 Verifying : tk-devel-1:8.6.12-5.fc39.x86_64 153/193 Verifying : tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 154/193 Verifying : tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noar 155/193 Verifying : tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_6 156/193 Verifying : ttmkfdir-3.0.9-69.fc39.x86_64 157/193 Verifying : tzdata-2023c-2.fc39.noarch 158/193 Verifying : tzdata-java-2023c-2.fc39.noarch 159/193 Verifying : xdg-utils-1.1.3-15.fc39.noarch 160/193 Verifying : xml-common-0.6.3-61.fc39.noarch 161/193 Verifying : xorg-x11-fonts-Type1-7.5-36.fc39.noarch 162/193 Verifying : xorg-x11-proto-devel-2023.2-2.fc39.noarch 163/193 Verifying : xz-devel-5.4.4-1.fc39.x86_64 164/193 Verifying : zlib-devel-1.2.13-4.fc39.x86_64 165/193 Verifying : R-core-4.3.2-1.fc39.x86_64 166/193 Verifying : R-core-devel-4.3.2-1.fc39.x86_64 167/193 Verifying : R-devel-4.3.2-1.fc39.x86_64 168/193 Verifying : R-java-4.3.2-1.fc39.x86_64 169/193 Verifying : R-java-devel-4.3.2-1.fc39.x86_64 170/193 Verifying : annobin-docs-12.30-1.fc39.noarch 171/193 Verifying : annobin-plugin-gcc-12.30-1.fc39.x86_64 172/193 Verifying : cpp-13.2.1-4.fc39.x86_64 173/193 Verifying : crypto-policies-scripts-20231113-1.gitb402e82.fc 174/193 Verifying : cups-libs-1:2.4.7-2.fc39.x86_64 175/193 Verifying : gcc-13.2.1-4.fc39.x86_64 176/193 Verifying : gcc-c++-13.2.1-4.fc39.x86_64 177/193 Verifying : gcc-gfortran-13.2.1-4.fc39.x86_64 178/193 Verifying : gcc-plugin-annobin-13.2.1-4.fc39.x86_64 179/193 Verifying : glib2-2.78.1-1.fc39.x86_64 180/193 Verifying : glib2-devel-2.78.1-1.fc39.x86_64 181/193 Verifying : glibc-devel-2.38-10.fc39.x86_64 182/193 Verifying : glibc-headers-x86-2.38-10.fc39.noarch 183/193 Verifying : google-noto-fonts-common-20230801-4.fc39.noarch 184/193 Verifying : google-noto-sans-vf-fonts-20230801-4.fc39.noarch 185/193 Verifying : libRmath-4.3.2-1.fc39.x86_64 186/193 Verifying : libRmath-devel-4.3.2-1.fc39.x86_64 187/193 Verifying : libgfortran-13.2.1-4.fc39.x86_64 188/193 Verifying : libquadmath-13.2.1-4.fc39.x86_64 189/193 Verifying : libquadmath-devel-13.2.1-4.fc39.x86_64 190/193 Verifying : libstdc++-devel-13.2.1-4.fc39.x86_64 191/193 Verifying : libtirpc-devel-1.3.4-0.fc39.x86_64 192/193 Verifying : sysprof-capture-devel-45.1-1.fc39.x86_64 193/193 Installed products updated. Installed: R-CRAN-Matrix-1.6.3-1.fc39.copr6636945.x86_64 R-CRAN-R6-2.5.1-1.fc39.copr6279323.noarch R-CRAN-Rcpp-1.0.11-1.fc39.copr6279302.x86_64 R-CRAN-RcppEigen-0.3.3.9.4-1.fc39.copr6596539.x86_64 R-CRAN-brio-1.1.3-1.fc39.copr6281913.x86_64 R-CRAN-callr-3.7.3-1.fc39.copr6285212.noarch R-CRAN-cli-3.6.1-1.fc39.copr6279347.x86_64 R-CRAN-crayon-1.5.2-1.fc39.copr6279327.noarch R-CRAN-desc-1.4.2-1.fc39.copr6282874.noarch R-CRAN-diffobj-0.3.5-1.fc39.copr6282940.x86_64 R-CRAN-digest-0.6.33-1.fc39.copr6279309.x86_64 R-CRAN-ellipsis-0.3.2-1.fc39.copr6282869.x86_64 R-CRAN-evaluate-0.23-1.fc39.copr6589765.noarch R-CRAN-fansi-1.0.5-1.fc39.copr6506680.x86_64 R-CRAN-fs-1.6.3-1.fc39.copr6279390.x86_64 R-CRAN-glue-1.6.2-1.fc39.copr6279303.x86_64 R-CRAN-jsonlite-1.8.7-1.fc39.copr6279319.x86_64 R-CRAN-lattice-0.22.5-1.fc39.copr6562879.x86_64 R-CRAN-lifecycle-1.0.4-1.fc39.copr6614518.noarch R-CRAN-magrittr-2.0.3-1.fc39.copr6279321.x86_64 R-CRAN-pillar-1.9.0-1.fc39.copr6286818.noarch R-CRAN-pkgbuild-1.4.2-1.fc39.copr6286816.noarch R-CRAN-pkgconfig-2.0.3-3.fc39.copr6279322.noarch R-CRAN-pkgload-1.3.3-1.fc39.copr6437975.noarch R-CRAN-praise-1.0.0-3.fc39.copr6279431.noarch R-CRAN-prettyunits-1.2.0-1.fc39.copr6439833.noarch R-CRAN-processx-3.8.2-1.fc39.copr6282868.x86_64 R-CRAN-ps-1.7.5-1.fc39.copr6279341.x86_64 R-CRAN-rematch2-2.1.2-3.fc39.copr6290080.noarch R-CRAN-rlang-1.1.2-1.fc39.copr6598950.x86_64 R-CRAN-rprojroot-2.0.4-1.fc39.copr6601156.noarch R-CRAN-testthat-3.2.0-1.fc39.copr6501172.x86_64 R-CRAN-tibble-3.2.1-1.fc39.copr6288598.x86_64 R-CRAN-utf8-1.2.4-1.fc39.copr6555966.x86_64 R-CRAN-vctrs-0.6.4-1.fc39.copr6524681.x86_64 R-CRAN-waldo-0.5.2-1.fc39.copr6596563.noarch R-CRAN-withr-2.5.2-1.fc39.copr6583488.noarch R-core-4.3.2-1.fc39.x86_64 R-core-devel-4.3.2-1.fc39.x86_64 R-devel-4.3.2-1.fc39.x86_64 R-java-4.3.2-1.fc39.x86_64 R-java-devel-4.3.2-1.fc39.x86_64 R-littler-0.3.18-4.fc39.x86_64 R-rpm-macros-1.2.1-7.fc39.noarch abattis-cantarell-vf-fonts-0.301-10.fc39.noarch alsa-lib-1.2.10-3.fc39.x86_64 annobin-docs-12.30-1.fc39.noarch annobin-plugin-gcc-12.30-1.fc39.x86_64 avahi-libs-0.8-24.fc39.x86_64 brotli-1.1.0-1.fc39.x86_64 brotli-devel-1.1.0-1.fc39.x86_64 bzip2-devel-1.0.8-16.fc39.x86_64 cairo-1.18.0-1.fc39.x86_64 cmake-filesystem-3.27.7-1.fc39.x86_64 copy-jdk-configs-4.1-3.fc39.noarch cpp-13.2.1-4.fc39.x86_64 crypto-policies-scripts-20231113-1.gitb402e82.fc39.noarch cups-libs-1:2.4.7-2.fc39.x86_64 dbus-libs-1:1.14.10-1.fc39.x86_64 default-fonts-core-sans-4.0-9.fc39.noarch desktop-file-utils-0.26-9.fc39.x86_64 emacs-filesystem-1:29.1-2.fc39.noarch expat-2.5.0-3.fc39.x86_64 flexiblas-3.3.1-5.fc39.x86_64 flexiblas-devel-3.3.1-5.fc39.x86_64 flexiblas-netlib-3.3.1-5.fc39.x86_64 flexiblas-netlib64-3.3.1-5.fc39.x86_64 flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64 flexiblas-openblas-openmp64-3.3.1-5.fc39.x86_64 fontconfig-2.14.2-5.fc39.x86_64 fontconfig-devel-2.14.2-5.fc39.x86_64 fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.x86_64 freetype-devel-2.13.1-2.fc39.x86_64 fribidi-1.0.13-2.fc39.x86_64 gc-8.2.2-4.fc39.x86_64 gcc-13.2.1-4.fc39.x86_64 gcc-c++-13.2.1-4.fc39.x86_64 gcc-gfortran-13.2.1-4.fc39.x86_64 gcc-plugin-annobin-13.2.1-4.fc39.x86_64 gettext-0.22-2.fc39.x86_64 gettext-envsubst-0.22-2.fc39.x86_64 gettext-libs-0.22-2.fc39.x86_64 gettext-runtime-0.22-2.fc39.x86_64 glib2-2.78.1-1.fc39.x86_64 glib2-devel-2.78.1-1.fc39.x86_64 glibc-devel-2.38-10.fc39.x86_64 glibc-headers-x86-2.38-10.fc39.noarch gnutls-3.8.1-1.fc39.x86_64 google-noto-fonts-common-20230801-4.fc39.noarch google-noto-sans-vf-fonts-20230801-4.fc39.noarch graphite2-1.3.14-12.fc39.x86_64 graphite2-devel-1.3.14-12.fc39.x86_64 guile22-2.2.7-9.fc39.x86_64 harfbuzz-8.2.1-2.fc39.x86_64 harfbuzz-devel-8.2.1-2.fc39.x86_64 harfbuzz-icu-8.2.1-2.fc39.x86_64 java-17-openjdk-1:17.0.8.0.7-1.fc39.x86_64 java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.x86_64 java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86_64 javapackages-filesystem-6.1.0-10.fc39.noarch jbigkit-libs-2.1-26.fc39.x86_64 kernel-headers-6.5.4-300.fc39.x86_64 libICE-1.0.10-11.fc39.x86_64 libRmath-4.3.2-1.fc39.x86_64 libRmath-devel-4.3.2-1.fc39.x86_64 libSM-1.2.3-13.fc39.x86_64 libX11-1.8.7-1.fc39.x86_64 libX11-common-1.8.7-1.fc39.noarch libX11-devel-1.8.7-1.fc39.x86_64 libX11-xcb-1.8.7-1.fc39.x86_64 libXau-1.0.11-3.fc39.x86_64 libXau-devel-1.0.11-3.fc39.x86_64 libXcomposite-0.4.5-10.fc39.x86_64 libXext-1.3.5-3.fc39.x86_64 libXft-2.3.8-3.fc39.x86_64 libXft-devel-2.3.8-3.fc39.x86_64 libXi-1.8.1-2.fc39.x86_64 libXmu-1.1.4-3.fc39.x86_64 libXrender-0.9.11-3.fc39.x86_64 libXrender-devel-0.9.11-3.fc39.x86_64 libXt-1.2.1-5.fc39.x86_64 libXtst-1.2.4-3.fc39.x86_64 libb2-0.98.1-9.fc39.x86_64 libblkid-devel-2.39.2-1.fc39.x86_64 libdatrie-0.2.13-7.fc39.x86_64 libffi-devel-3.4.4-4.fc39.x86_64 libfontenc-1.1.6-3.fc39.x86_64 libgfortran-13.2.1-4.fc39.x86_64 libicu-73.2-2.fc39.x86_64 libicu-devel-73.2-2.fc39.x86_64 libjpeg-turbo-2.1.4-3.fc39.x86_64 liblerc-4.0.0-4.fc39.x86_64 libmount-devel-2.39.2-1.fc39.x86_64 libmpc-1.3.1-3.fc39.x86_64 libpng-2:1.6.37-15.fc39.x86_64 libpng-devel-2:1.6.37-15.fc39.x86_64 libquadmath-13.2.1-4.fc39.x86_64 libquadmath-devel-13.2.1-4.fc39.x86_64 libselinux-devel-3.5-5.fc39.x86_64 libsepol-devel-3.5-2.fc39.x86_64 libstdc++-devel-13.2.1-4.fc39.x86_64 libthai-0.1.29-6.fc39.x86_64 libtiff-4.4.0-8.fc39.x86_64 libtirpc-devel-1.3.4-0.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libwebp-1.3.2-2.fc39.x86_64 libxcb-1.13.1-12.fc39.x86_64 libxcb-devel-1.13.1-12.fc39.x86_64 libxcrypt-devel-4.4.36-2.fc39.x86_64 libxml2-devel-2.10.4-3.fc39.x86_64 lksctp-tools-1.0.19-4.fc39.x86_64 lua-5.4.6-3.fc39.x86_64 lua-posix-36.2.1-3.fc39.x86_64 make-1:4.4.1-2.fc39.x86_64 mkfontscale-1.2.2-4.fc39.x86_64 mpdecimal-2.5.1-7.fc39.x86_64 nettle-3.9.1-2.fc39.x86_64 nspr-4.35.0-14.fc39.x86_64 nss-3.94.0-2.fc39.x86_64 nss-softokn-3.94.0-2.fc39.x86_64 nss-softokn-freebl-3.94.0-2.fc39.x86_64 nss-sysinit-3.94.0-2.fc39.x86_64 nss-util-3.94.0-2.fc39.x86_64 openblas-0.3.21-6.fc39.x86_64 openblas-openmp-0.3.21-6.fc39.x86_64 openblas-openmp64-0.3.21-6.fc39.x86_64 pango-1.51.0-1.fc39.x86_64 pcre2-devel-10.42-1.fc39.2.x86_64 pcre2-utf16-10.42-1.fc39.2.x86_64 pcre2-utf32-10.42-1.fc39.2.x86_64 pixman-0.42.2-2.fc39.x86_64 python-pip-wheel-23.2.1-1.fc39.noarch python3-3.12.0-1.fc39.x86_64 python3-libs-3.12.0-1.fc39.x86_64 python3-setuptools-67.7.2-7.fc39.noarch sysprof-capture-devel-45.1-1.fc39.x86_64 tcl-1:8.6.12-5.fc39.x86_64 tcl-devel-1:8.6.12-5.fc39.x86_64 tk-1:8.6.12-5.fc39.x86_64 tk-devel-1:8.6.12-5.fc39.x86_64 tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 ttmkfdir-3.0.9-69.fc39.x86_64 tzdata-2023c-2.fc39.noarch tzdata-java-2023c-2.fc39.noarch xdg-utils-1.1.3-15.fc39.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-Type1-7.5-36.fc39.noarch xorg-x11-proto-devel-2023.2-2.fc39.noarch xz-devel-5.4.4-1.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 Complete! Finish: build setup for R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm Start: rpmbuild R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Lljw3W + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf psqn + /usr/bin/mkdir -p psqn + cd psqn + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/psqn_0.3.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/psqn-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/psqn-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d psqn/src ']' + find psqn/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d psqn/src ']' + find psqn/src/Makevars -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ul8sDV + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd psqn + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.ZRdXaK + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd psqn + mkdir -p /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64/usr/local/lib/R/library psqn * installing *source* package ‘psqn’ ... ** package ‘psqn’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)’ using C++11 g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:397, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:377: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:370: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:439: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:110:39: required from ‘SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from ‘SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ RcppExports.cpp:57:33: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from ‘Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]’ /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:80:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/RcppEigenWrap.h:110:39: required from ‘SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ /usr/local/lib/R/library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from ‘SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]’ RcppExports.cpp:57:33: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c r-api.cpp -o r-api.o In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:397, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:28, from /usr/local/lib/R/library/RcppEigen/include/RcppEigen.h:25, from ../inst/include/psqn-Rcpp-wrapper.h:9, from r-api.cpp:6: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:377: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:370: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:439: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/SparseCore:37, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:26, from /usr/local/lib/R/library/RcppEigen/include/RcppEigenForward.h:29: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::OuterStride<> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from ‘class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from ‘class Eigen::Ref, 0, Eigen::OuterStride<> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from ‘struct Eigen::internal::is_ref_compatible_impl >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from ‘struct Eigen::internal::is_ref_compatible >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from ‘class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >’ ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from ‘class Eigen::Ref, 0, Eigen::OuterStride<> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from ‘struct Eigen::internal::is_ref_compatible_impl >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from ‘struct Eigen::internal::is_ref_compatible >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from ‘class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >’ ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from ‘class Eigen::Ref, 0, Eigen::OuterStride<> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from ‘struct Eigen::internal::is_ref_compatible_impl >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from ‘struct Eigen::internal::is_ref_compatible >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from ‘class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >’ ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:179:14: required from ‘class Eigen::IncompleteCholesky’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:381:18: required from ‘class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >’ ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:179:14: required from ‘class Eigen::IncompleteCholesky’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:381:18: required from ‘class Eigen::IterativeSolverBase, 3, Eigen::IncompleteCholesky > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >’ ../inst/include/psqn.h:479:9: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 3, Eigen::IncompleteCholesky >, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 3, Eigen::IncompleteCholesky >, Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >’ ../inst/include/psqn.h:492:21: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:218:17: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:219:17: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:241:30: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:241:42: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from ‘class Eigen::RefBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:235:77: required from ‘class Eigen::Ref, 0, Eigen::InnerStride<1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from ‘class Eigen::Ref, 0, Eigen::InnerStride<1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from ‘class Eigen::Ref, 0, Eigen::InnerStride<1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::InnerStride<1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:811:41: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:246:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::ScalarTypeMatch), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:476: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:245:30: note: after user-defined conversion: ‘Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::ScalarTypeMatch), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; TPlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::ScalarTypeMatch), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]’ 245 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/IterativeLinearSolvers:44, from /usr/local/lib/R/library/RcppEigen/include/Eigen/Sparse:33: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:92: note: initializing argument 1 of ‘void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]’ 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:216:30: note: after user-defined conversion: ‘Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; PlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]’ 216 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:114: note: initializing argument 2 of ‘void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]’ 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~^~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Ref, 0, Eigen::InnerStride<1> >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: In instantiation of ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:216:30: note: after user-defined conversion: ‘Eigen::Ref::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; PlainObjectType = Eigen::Matrix; int Options = 0; StrideType = Eigen::InnerStride<1>; typename Eigen::internal::enable_if<(bool)(typename Eigen::internal::traits >::match::MatchAtCompileTime), Derived>::type = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits >::match = Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, 0, Eigen::Stride<0, 0> > >]’ 216 | EIGEN_DEVICE_FUNC inline Ref(const DenseBase& expr, | ^~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:379:136: note: initializing argument 3 of ‘void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]’ 379 | inline void IncompleteCholesky::updateList(Ref colPtr, Ref rowIdx, Ref vals, const Index& col, const Index& jk, VectorIx& firstElt, VectorList& listCol) | ~~~~~~~~~~~~~~^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:329:16: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:330:18: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:352:42: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/local/lib/R/library/RcppEigen/include/Eigen/Core:445: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block, -1, 1, false>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:352:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:353:42: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:200:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::InnerStride<1> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::InnerStride<1> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block, -1, 1, false>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:353:21: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ ../inst/include/psqn.h:1903:33: required from ‘void PSQN::optimizer::fill_sparse_B_mat() [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]’ ../inst/include/psqn.h:1979:5: required from ‘Eigen::SparseMatrix PSQN::optimizer::true_hess_sparse(const double*, double, double, double, unsigned int) [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]’ r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]’ ../inst/include/psqn.h:438:32: required from ‘void PSQN::base_optimizer::add_constraints_to_sparse_hess(Eigen::SparseMatrix&) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint]’ ../inst/include/psqn.h:472:7: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1243:70: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::insert(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:217:16: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::Scalar& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::coeffRef(Eigen::Index, Eigen::Index) [with _Scalar = double; int _Options = 0; _StorageIndex = int; Scalar = double; Eigen::Index = long int]’ ../inst/include/psqn.h:438:32: required from ‘void PSQN::base_optimizer::add_constraints_to_sparse_hess(Eigen::SparseMatrix&) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint]’ ../inst/include/psqn.h:472:7: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::InnerStride<1> >, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::InnerStride<1> >, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::InnerStride<1> >, -1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:385:19: required from ‘void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:11: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = scalar_sum_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ ../inst/include/psqn.h:1903:33: required from ‘void PSQN::optimizer::fill_sparse_B_mat() [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]’ ../inst/include/psqn.h:1979:5: required from ‘Eigen::SparseMatrix PSQN::optimizer::true_hess_sparse(const double*, double, double, double, unsigned int) [with EFunc = r_worker_psqn; TReporter = PSQN::R_reporter; Tinterrupter = PSQN::R_interrupter; Tcaller = PSQN::default_caller; Tconstraint = PSQN::default_constraint]’ r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:317:3: required from ‘void Eigen::DenseBase::fill(const Scalar&) [with Derived = Eigen::Matrix; Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:226:19: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:232:18: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::InnerStride<1> >, -1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from ‘class Eigen::internal::visitor_evaluator, 0, Eigen::InnerStride<1> >, -1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor, 0, Eigen::InnerStride<1> >, -1, 1, false> >; Derived = Eigen::Block, 0, Eigen::InnerStride<1> >, -1, 1, false>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:229:14: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with IndexType = long int; Derived = Eigen::Block, 0, Eigen::InnerStride<1> >, -1, 1, false>; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:385:34: required from ‘void Eigen::IncompleteCholesky::updateList(Eigen::Ref >, Eigen::Ref >, Eigen::Ref >, const Eigen::Index&, const Eigen::Index&, VectorIx&, VectorList&) [with Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering; typename _OrderingType::PermutationType::StorageIndex = int; typename _OrderingType::PermutationType = Eigen::PermutationMatrix<-1, -1, int>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; typename Eigen::internal::conditional::IsVectorAtCompileTime, Eigen::InnerStride<1>, Eigen::OuterStride<> >::type = Eigen::InnerStride<1>; Eigen::Index = long int; VectorIx = Eigen::Matrix; VectorList = std::vector >, std::allocator > > >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:316:11: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from ‘struct Eigen::internal::evaluator >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:774:26: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:709:13: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]’ r-api.cpp:573:32: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from ‘Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:217:27: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:434:57: required from ‘void Eigen::internal::permute_symm_to_fullsymm(const MatrixType&, Eigen::SparseMatrix&, const typename MatrixType::StorageIndex*) [with int Mode = 3; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int DestOrder = 1; typename MatrixType::Scalar = double; typename MatrixType::StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:641:45: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Sparse2Sparse>::run(Eigen::SparseMatrix&, const SrcXprType&, const Eigen::internal::assign_op&) [with int Options = 0; DstXprType = Eigen::SparseMatrix; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int Mode = 3; Scalar = double; typename DstXprType::StorageIndex = int; SrcXprType = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; typename MatrixType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:783:29: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:208:9: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > > >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from ‘class Eigen::internal::SparseTransposeImpl, 0, Eigen::OuterStride<> >, 1024>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, Eigen::Sparse>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:223:23: required from ‘void Eigen::ConjugateGradient<_MatrixType, _UpLo, _Preconditioner>::_solve_with_guess_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; _MatrixType = Eigen::SparseMatrix; int _UpLo = 3; _Preconditioner = Eigen::IncompleteCholesky]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:237:27: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0, 7>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:35: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0>, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Block, -1, 1, true>, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:29: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:64:20: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0, 7>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> > >, Eigen::Matrix, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:71:25: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:16: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:86:11: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true> >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Matrix; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:467:24: required from ‘void Eigen::internal::permute_symm_to_fullsymm(const MatrixType&, Eigen::SparseMatrix&, const typename MatrixType::StorageIndex*) [with int Mode = 3; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int DestOrder = 1; typename MatrixType::Scalar = double; typename MatrixType::StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:641:45: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Sparse2Sparse>::run(Eigen::SparseMatrix&, const SrcXprType&, const Eigen::internal::assign_op&) [with int Options = 0; DstXprType = Eigen::SparseMatrix; MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; int Mode = 3; Scalar = double; typename DstXprType::StorageIndex = int; SrcXprType = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; typename MatrixType::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:783:29: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::EigenBase&) [with OtherDerived = Eigen::SparseSymmetricPermutationProduct, 0, Eigen::OuterStride<> >, 3>; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:208:9: required from ‘void Eigen::IncompleteCholesky::factorize(const _MatrixType&) [with MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:31: required from ‘Derived& Eigen::IterativeSolverBase::factorize(const Eigen::EigenBase&) [with MatrixDerived = Eigen::SparseMatrix; Derived = Eigen::ConjugateGradient, 3, Eigen::IncompleteCholesky >]’ ../inst/include/psqn.h:480:19: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, double>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true> > >; Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::Transpose, 0, Eigen::OuterStride<> > >; Rhs = Eigen::Block, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::IncompleteCholesky; Eigen::Index = long int; typename Dest::RealScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:224:35: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = add_assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = Eigen::internal::add_assign_op; Weak = void]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Derived = Eigen::Block, -1, 1, true>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Eigen::Index = long int]’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix, const Eigen::Matrix > >; Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:67:48: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 2> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 2> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 7>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:158:50: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Matrix, 1>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Matrix, 1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Matrix, 1> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base >, Eigen::Matrix, 1, 7>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl >, Eigen::Matrix, 1, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, Eigen::Matrix, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:160:32: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 1> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from ‘class Eigen::TriangularViewImpl, 1, Eigen::Sparse>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from ‘class Eigen::TriangularView, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:161:45: required from ‘void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::IncompleteCholesky; RhsType = Eigen::Matrix; Scalar = double; SrcXprType = Eigen::Solve, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, Eigen::Matrix >; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:161:53: required from ‘void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase > >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from ‘class Eigen::internal::SparseTransposeImpl, 1024>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from ‘class Eigen::TransposeImpl, Eigen::Sparse>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:22: required from ‘void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >, 2> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseTriangularView.h:25:56: required from ‘class Eigen::TriangularViewImpl >, 2, Eigen::Sparse>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:186:58: required from ‘class Eigen::TriangularView >, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:55: required from ‘void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::IncompleteCholesky; RhsType = Eigen::Matrix; Scalar = double; SrcXprType = Eigen::Solve, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, Eigen::Matrix >; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 2>, Eigen::Matrix >, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, 2>, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, 2>, Eigen::Matrix > >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl >, 2>, Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve >, 2>, Eigen::Matrix >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:162:63: required from ‘void Eigen::IncompleteCholesky::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; Scalar = double; int _UpLo = 3; _OrderingType = Eigen::AMDOrdering]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Matrix, 2>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Matrix, 2> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Matrix, 2> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base >, Eigen::Matrix, 2, 7>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl >, Eigen::Matrix, 2, Eigen::Dense>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product >, Eigen::Matrix, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h:165:30: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 3>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:174:81: required from ‘class Eigen::DenseBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase, 1, 1, false>, 1>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, 1, false, true>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 2>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, 1, false, true>’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = swap_assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, 1, false>; Derived = Eigen::Block, 1, 1, false>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:992:18: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; Derived = Eigen::Matrix]’ /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 3, Eigen::IncompleteCholesky >, Eigen::Matrix >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ ../inst/include/psqn.h:492:11: required from ‘bool PSQN::base_optimizer::conj_grad(const double*, double*, double, PSQN::psqn_uint, int, PSQN::precondition) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ ../inst/include/psqn.h:854:11: required from ‘PSQN::optim_info PSQN::base_optimizer::optim(double*, double, PSQN::psqn_uint, double, double, bool, int, double, bool, PSQN::psqn_uint, PSQN::precondition, double) [with OptT = PSQN::optimizer; Tconstraint = PSQN::default_constraint; PSQN::psqn_uint = unsigned int]’ r-api.cpp:421:25: required from here /usr/local/lib/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-intrapolate.cpp -o test-intrapolate.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-lp.cpp -o test-lp.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-richardson-extrapolation.cpp -o test-richardson-extrapolation.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppEigen/include' -I'/usr/local/lib/R/library/testthat/include' -I/usr/local/include -I../inst/include/ -fopenmp -DPSQN_W_LAPACK -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test-runner.cpp -o test-runner.o g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o psqn.so RcppExports.o r-api.o test-intrapolate.o test-lp.o test-richardson-extrapolation.o test-runner.o -lflexiblas -lflexiblas -lgfortran -lm -lquadmath -fopenmp -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64/usr/local/lib/R/library/00LOCK-psqn/00new/psqn/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘psqn’ finding HTML links ... done psqn-package html psqn html psqn_bfgs html psqn_generic html psqn_hess html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (psqn) + test -d psqn/src + cd psqn/src + rm -f RcppExports.o r-api.o test-intrapolate.o test-lp.o test-richardson-extrapolation.o test-runner.o psqn.so + rm -f /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 0.3.1-1.fc39.copr6665194 --unique-debug-suffix -0.3.1-1.fc39.copr6665194.x86_64 --unique-debug-src-base R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/psqn find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 383 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 Provides: R-CRAN-psqn = 0.3.1-1.fc39.copr6665194 R-CRAN-psqn(x86-64) = 0.3.1-1.fc39.copr6665194 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-psqn-debugsource-0.3.1-1.fc39.copr6665194.x86_64 Provides: R-CRAN-psqn-debugsource = 0.3.1-1.fc39.copr6665194 R-CRAN-psqn-debugsource(x86-64) = 0.3.1-1.fc39.copr6665194 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-psqn-debuginfo-0.3.1-1.fc39.copr6665194.x86_64 Provides: R-CRAN-psqn-debuginfo = 0.3.1-1.fc39.copr6665194 R-CRAN-psqn-debuginfo(x86-64) = 0.3.1-1.fc39.copr6665194 debuginfo(build-id) = 166276403ef400023adb03292a507e33de78002e Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-psqn-debugsource(x86-64) = 0.3.1-1.fc39.copr6665194 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-psqn-debugsource-0.3.1-1.fc39.copr6665194.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-psqn-debuginfo-0.3.1-1.fc39.copr6665194.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.rrINWW + umask 022 + cd /builddir/build/BUILD + cd psqn + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Ab8YRl + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/psqn-SPECPARTS + rm -rf psqn psqn.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm Finish: build phase for R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1700309121.826828/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-psqn-0.3.1-1.fc39.copr6665194.src.rpm) Config(child) 1 minutes 23 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-psqn", "epoch": null, "version": "0.3.1", "release": "1.fc39.copr6665194", "arch": "src" }, { "name": "R-CRAN-psqn-debuginfo", "epoch": null, "version": "0.3.1", "release": "1.fc39.copr6665194", "arch": "x86_64" }, { "name": "R-CRAN-psqn-debugsource", "epoch": null, "version": "0.3.1", "release": "1.fc39.copr6665194", "arch": "x86_64" }, { "name": "R-CRAN-psqn", "epoch": null, "version": "0.3.1", "release": "1.fc39.copr6665194", "arch": "x86_64" } ] } RPMResults finished