Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c159' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6703989-fedora-39-x86_64 --chroot fedora-39-x86_64 Version: 0.70 PID: 22487 Logging PID: 22488 Task: {'appstream': False, 'background': False, 'bootstrap': 'off', 'build_id': 6703989, 'buildroot_pkgs': [], 'chroot': 'fedora-39-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '947040b74507cd59d692f74310e00faf09b5e07d', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-malan', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-CRAN-malan', 'package_version': '1.0.3-1.copr6703989', 'project_dirname': 'cran', 'project_name': 'cran', 'project_owner': 'iucar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/iucar/cran/fedora-39-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'iucar/cran--iucar', 'source_json': {}, 'source_type': None, 'submitter': 'iucar', 'tags': [], 'task_id': '6703989-fedora-39-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-malan /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/iucar/cran/R-CRAN-malan', '/var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan'... Running: git checkout 947040b74507cd59d692f74310e00faf09b5e07d -- cmd: ['git', 'checkout', '947040b74507cd59d692f74310e00faf09b5e07d', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan rc: 0 stdout: stderr: Note: switching to '947040b74507cd59d692f74310e00faf09b5e07d'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 947040b automatic import of R-CRAN-malan Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading malan_1.0.3.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o malan_1.0.3.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/iucar/cran/R-CRAN-malan/malan_1.0.3.tar.gz/md5/cca6ebde8913ffd2c64c8d2c6f0aa3af/malan_1.0.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 553k 100 553k 0 0 5052k 0 --:--:-- --:--:-- --:--:-- 5075k INFO: Reading stdout from command: md5sum malan_1.0.3.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan/R-CRAN-malan.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1701222189.587506 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan/R-CRAN-malan.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1701222189.587506 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan/R-CRAN-malan.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.2 INFO: Mock Version: 5.2 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1701222189.587506/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (fallback) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 55 MB/s | 25 MB 00:00 fedora 29 MB/s | 89 MB 00:03 updates 10 MB/s | 17 MB 00:01 Last metadata expiration check: 0:00:05 ago on Wed Nov 29 01:43:40 2023. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.2.21-1.fc39 updates 1.8 M bzip2 x86_64 1.0.8-16.fc39 fedora 52 k coreutils x86_64 9.3-4.fc39 fedora 1.1 M cpio x86_64 2.14-4.fc39 fedora 279 k diffutils x86_64 3.10-3.fc39 fedora 398 k fedora-release-common noarch 39-30 fedora 18 k findutils x86_64 1:4.9.0-5.fc39 fedora 492 k gawk x86_64 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack x86_64 2.38-11.fc39 updates 70 k grep x86_64 3.11-3.fc39 fedora 298 k gzip x86_64 1.12-6.fc39 fedora 166 k info x86_64 7.0.3-3.fc39 fedora 182 k patch x86_64 2.7.6-22.fc39 fedora 125 k redhat-rpm-config noarch 262-1.fc39 fedora 84 k rpm-build x86_64 4.19.0-1.fc39 fedora 78 k sed x86_64 4.8-14.fc39 fedora 306 k shadow-utils x86_64 2:4.14.0-2.fc39 updates 1.3 M tar x86_64 2:1.35-2.fc39 fedora 864 k unzip x86_64 6.0-62.fc39 fedora 184 k util-linux x86_64 2.39.2-1.fc39 fedora 1.2 M which x86_64 2.21-40.fc39 fedora 42 k xz x86_64 5.4.4-1.fc39 fedora 556 k Installing dependencies: alternatives x86_64 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs x86_64 3.1.2-5.fc39 updates 117 k authselect x86_64 1.4.3-1.fc39 fedora 149 k authselect-libs x86_64 1.4.3-1.fc39 fedora 249 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils x86_64 2.40-13.fc39 fedora 5.6 M binutils-gold x86_64 2.40-13.fc39 fedora 797 k bzip2-libs x86_64 1.0.8-16.fc39 fedora 41 k ca-certificates noarch 2023.2.60_v7.0.306-2.fc39 fedora 837 k coreutils-common x86_64 9.3-4.fc39 fedora 2.1 M cracklib x86_64 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20231113-1.gitb402e82.fc39 updates 99 k curl x86_64 8.2.1-3.fc39 fedora 345 k cyrus-sasl-lib x86_64 2.1.28-11.fc39 fedora 793 k debugedit x86_64 5.0-10.fc39 fedora 77 k dwz x86_64 0.15-3.fc39 fedora 134 k ed x86_64 1.19-4.fc39 fedora 79 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils x86_64 0.190-1.fc39 updates 550 k elfutils-debuginfod-client x86_64 0.190-1.fc39 updates 38 k elfutils-default-yama-scope noarch 0.190-1.fc39 updates 14 k elfutils-libelf x86_64 0.190-1.fc39 updates 195 k elfutils-libs x86_64 0.190-1.fc39 updates 260 k fedora-gpg-keys noarch 39-1 fedora 130 k fedora-release noarch 39-30 fedora 8.1 k fedora-release-identity-basic noarch 39-30 fedora 8.9 k fedora-repos noarch 39-1 fedora 9.3 k file x86_64 5.44-5.fc39 fedora 49 k file-libs x86_64 5.44-5.fc39 fedora 729 k filesystem x86_64 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal x86_64 13.2-10.fc39 updates 4.2 M gdbm-libs x86_64 1:1.23-4.fc39 fedora 56 k ghc-srpm-macros noarch 1.6.1-2.fc39 fedora 7.8 k glibc x86_64 2.38-11.fc39 updates 2.2 M glibc-common x86_64 2.38-11.fc39 updates 351 k glibc-gconv-extra x86_64 2.38-11.fc39 updates 1.6 M gmp x86_64 1:6.2.1-5.fc39 fedora 313 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.3.1-1.fc39 updates 28 k jansson x86_64 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs x86_64 1.6.1-7.fc39 fedora 31 k krb5-libs x86_64 1.21.2-2.fc39 updates 764 k libacl x86_64 2.3.1-8.fc39 fedora 23 k libarchive x86_64 3.7.1-1.fc39 fedora 408 k libattr x86_64 2.5.1-8.fc39 fedora 18 k libblkid x86_64 2.39.2-1.fc39 fedora 116 k libbrotli x86_64 1.1.0-1.fc39 fedora 336 k libcap x86_64 2.48-7.fc39 fedora 68 k libcap-ng x86_64 0.8.3-8.fc39 fedora 32 k libcom_err x86_64 1.47.0-2.fc39 fedora 26 k libcurl x86_64 8.2.1-3.fc39 fedora 323 k libdb x86_64 5.3.28-56.fc39 fedora 760 k libeconf x86_64 0.5.2-1.fc39 fedora 30 k libevent x86_64 2.1.12-9.fc39 fedora 258 k libfdisk x86_64 2.39.2-1.fc39 fedora 162 k libffi x86_64 3.4.4-4.fc39 fedora 40 k libgcc x86_64 13.2.1-4.fc39 updates 111 k libgomp x86_64 13.2.1-4.fc39 updates 320 k libidn2 x86_64 2.3.4-3.fc39 fedora 117 k libmount x86_64 2.39.2-1.fc39 fedora 155 k libnghttp2 x86_64 1.55.1-4.fc39 updates 76 k libnsl2 x86_64 2.0.0-6.fc39 fedora 30 k libpkgconf x86_64 1.9.5-2.fc39 fedora 38 k libpsl x86_64 0.21.2-4.fc39 fedora 63 k libpwquality x86_64 1.4.5-6.fc39 fedora 120 k libselinux x86_64 3.5-5.fc39 fedora 87 k libsemanage x86_64 3.5-4.fc39 fedora 120 k libsepol x86_64 3.5-2.fc39 fedora 324 k libsigsegv x86_64 2.14-5.fc39 fedora 27 k libsmartcols x86_64 2.39.2-1.fc39 fedora 67 k libssh x86_64 0.10.5-2.fc39 fedora 211 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ x86_64 13.2.1-4.fc39 updates 862 k libtasn1 x86_64 4.19.0-3.fc39 fedora 74 k libtirpc x86_64 1.3.4-0.fc39 updates 94 k libunistring x86_64 1.1-5.fc39 fedora 543 k libutempter x86_64 1.2.1-10.fc39 fedora 26 k libuuid x86_64 2.39.2-1.fc39 fedora 28 k libverto x86_64 0.3.2-6.fc39 fedora 20 k libxcrypt x86_64 4.4.36-2.fc39 fedora 119 k libxml2 x86_64 2.10.4-3.fc39 fedora 701 k libzstd x86_64 1.5.5-4.fc39 fedora 309 k lua-libs x86_64 5.4.6-3.fc39 fedora 133 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs x86_64 1.9.4-4.fc39 fedora 67 k mpfr x86_64 4.2.0-3.fc39 fedora 344 k ncurses-base noarch 6.4-7.20230520.fc39 fedora 88 k ncurses-libs x86_64 6.4-7.20230520.fc39 fedora 336 k ocaml-srpm-macros noarch 8-2.fc39 fedora 14 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap x86_64 2.6.6-1.fc39 fedora 255 k openssl-libs x86_64 1:3.1.1-4.fc39 fedora 2.2 M p11-kit x86_64 0.25.3-1.fc39 updates 520 k p11-kit-trust x86_64 0.25.3-1.fc39 updates 140 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam x86_64 1.5.3-3.fc39 updates 542 k pam-libs x86_64 1.5.3-3.fc39 updates 56 k pcre2 x86_64 10.42-1.fc39.2 fedora 233 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf x86_64 1.9.5-2.fc39 fedora 42 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config x86_64 1.9.5-2.fc39 fedora 9.6 k popt x86_64 1.19-3.fc39 fedora 66 k publicsuffix-list-dafsa noarch 20230812-1.fc39 fedora 57 k pyproject-srpm-macros noarch 1.10.0-1.fc39 updates 14 k python-srpm-macros noarch 3.12-4.fc39 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc39 updates 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc39 updates 8.6 k readline x86_64 8.2-4.fc39 fedora 213 k rpm x86_64 4.19.0-1.fc39 fedora 538 k rpm-build-libs x86_64 4.19.0-1.fc39 fedora 96 k rpm-libs x86_64 4.19.0-1.fc39 fedora 312 k rpm-sequoia x86_64 1.5.0-1.fc39 fedora 871 k rpmautospec-rpm-macros noarch 0.3.8-1.fc39 updates 9.0 k rust-srpm-macros noarch 25.2-2.fc39 updates 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs x86_64 3.42.0-7.fc39 fedora 678 k systemd-libs x86_64 254.5-2.fc39 fedora 689 k util-linux-core x86_64 2.39.2-1.fc39 fedora 494 k xxhash-libs x86_64 0.8.2-1.fc39 fedora 37 k xz-libs x86_64 5.4.4-1.fc39 fedora 108 k zip x86_64 3.0-39.fc39 fedora 266 k zlib x86_64 1.2.13-4.fc39 fedora 94 k zstd x86_64 1.5.5-4.fc39 fedora 482 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 151 Packages Total download size: 52 M Installed size: 178 M Downloading Packages: (1/151): alternatives-1.25-1.fc39.x86_64.rpm 272 kB/s | 39 kB 00:00 (2/151): ansible-srpm-macros-1-11.fc39.noarch.r 137 kB/s | 21 kB 00:00 (3/151): basesystem-11-18.fc39.noarch.rpm 226 kB/s | 7.2 kB 00:00 (4/151): authselect-1.4.3-1.fc39.x86_64.rpm 683 kB/s | 149 kB 00:00 (5/151): authselect-libs-1.4.3-1.fc39.x86_64.rp 2.1 MB/s | 249 kB 00:00 (6/151): bzip2-1.0.8-16.fc39.x86_64.rpm 1.5 MB/s | 52 kB 00:00 (7/151): bzip2-libs-1.0.8-16.fc39.x86_64.rpm 1.1 MB/s | 41 kB 00:00 (8/151): binutils-gold-2.40-13.fc39.x86_64.rpm 6.7 MB/s | 797 kB 00:00 (9/151): coreutils-9.3-4.fc39.x86_64.rpm 14 MB/s | 1.1 MB 00:00 (10/151): ca-certificates-2023.2.60_v7.0.306-2. 7.1 MB/s | 837 kB 00:00 (11/151): binutils-2.40-13.fc39.x86_64.rpm 18 MB/s | 5.6 MB 00:00 (12/151): cpio-2.14-4.fc39.x86_64.rpm 4.6 MB/s | 279 kB 00:00 (13/151): coreutils-common-9.3-4.fc39.x86_64.rp 21 MB/s | 2.1 MB 00:00 (14/151): cracklib-2.9.11-2.fc39.x86_64.rpm 2.9 MB/s | 94 kB 00:00 (15/151): curl-8.2.1-3.fc39.x86_64.rpm 7.6 MB/s | 345 kB 00:00 (16/151): cyrus-sasl-lib-2.1.28-11.fc39.x86_64. 17 MB/s | 793 kB 00:00 (17/151): debugedit-5.0-10.fc39.x86_64.rpm 2.0 MB/s | 77 kB 00:00 (18/151): diffutils-3.10-3.fc39.x86_64.rpm 8.6 MB/s | 398 kB 00:00 (19/151): dwz-0.15-3.fc39.x86_64.rpm 4.0 MB/s | 134 kB 00:00 (20/151): ed-1.19-4.fc39.x86_64.rpm 2.3 MB/s | 79 kB 00:00 (21/151): efi-srpm-macros-5-9.fc39.noarch.rpm 746 kB/s | 22 kB 00:00 (22/151): fedora-gpg-keys-39-1.noarch.rpm 4.0 MB/s | 130 kB 00:00 (23/151): fedora-release-39-30.noarch.rpm 268 kB/s | 8.1 kB 00:00 (24/151): fedora-release-common-39-30.noarch.rp 610 kB/s | 18 kB 00:00 (25/151): fedora-release-identity-basic-39-30.n 299 kB/s | 8.9 kB 00:00 (26/151): fedora-repos-39-1.noarch.rpm 313 kB/s | 9.3 kB 00:00 (27/151): file-5.44-5.fc39.x86_64.rpm 1.5 MB/s | 49 kB 00:00 (28/151): file-libs-5.44-5.fc39.x86_64.rpm 13 MB/s | 729 kB 00:00 (29/151): filesystem-3.18-6.fc39.x86_64.rpm 18 MB/s | 1.1 MB 00:00 (30/151): findutils-4.9.0-5.fc39.x86_64.rpm 8.8 MB/s | 492 kB 00:00 (31/151): fonts-srpm-macros-2.0.5-12.fc39.noarc 796 kB/s | 26 kB 00:00 (32/151): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 232 kB/s | 7.4 kB 00:00 (33/151): gdbm-libs-1.23-4.fc39.x86_64.rpm 1.6 MB/s | 56 kB 00:00 (34/151): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 225 kB/s | 7.8 kB 00:00 (35/151): gawk-5.2.2-2.fc39.x86_64.rpm 15 MB/s | 1.1 MB 00:00 (36/151): gmp-6.2.1-5.fc39.x86_64.rpm 7.2 MB/s | 313 kB 00:00 (37/151): gnat-srpm-macros-6-3.fc39.noarch.rpm 239 kB/s | 8.8 kB 00:00 (38/151): grep-3.11-3.fc39.x86_64.rpm 7.6 MB/s | 298 kB 00:00 (39/151): gzip-1.12-6.fc39.x86_64.rpm 4.4 MB/s | 166 kB 00:00 (40/151): info-7.0.3-3.fc39.x86_64.rpm 4.8 MB/s | 182 kB 00:00 (41/151): jansson-2.13.1-7.fc39.x86_64.rpm 1.4 MB/s | 44 kB 00:00 (42/151): kernel-srpm-macros-1.0-20.fc39.noarch 349 kB/s | 10 kB 00:00 (43/151): keyutils-libs-1.6.1-7.fc39.x86_64.rpm 1.0 MB/s | 31 kB 00:00 (44/151): libacl-2.3.1-8.fc39.x86_64.rpm 763 kB/s | 23 kB 00:00 (45/151): libattr-2.5.1-8.fc39.x86_64.rpm 547 kB/s | 18 kB 00:00 (46/151): libarchive-3.7.1-1.fc39.x86_64.rpm 11 MB/s | 408 kB 00:00 (47/151): libblkid-2.39.2-1.fc39.x86_64.rpm 3.5 MB/s | 116 kB 00:00 (48/151): libbrotli-1.1.0-1.fc39.x86_64.rpm 9.0 MB/s | 336 kB 00:00 (49/151): libcap-2.48-7.fc39.x86_64.rpm 1.9 MB/s | 68 kB 00:00 (50/151): libcap-ng-0.8.3-8.fc39.x86_64.rpm 1.1 MB/s | 32 kB 00:00 (51/151): libcom_err-1.47.0-2.fc39.x86_64.rpm 865 kB/s | 26 kB 00:00 (52/151): libcurl-8.2.1-3.fc39.x86_64.rpm 9.0 MB/s | 323 kB 00:00 (53/151): libdb-5.3.28-56.fc39.x86_64.rpm 16 MB/s | 760 kB 00:00 (54/151): libeconf-0.5.2-1.fc39.x86_64.rpm 854 kB/s | 30 kB 00:00 (55/151): libevent-2.1.12-9.fc39.x86_64.rpm 6.8 MB/s | 258 kB 00:00 (56/151): libfdisk-2.39.2-1.fc39.x86_64.rpm 4.7 MB/s | 162 kB 00:00 (57/151): libffi-3.4.4-4.fc39.x86_64.rpm 1.2 MB/s | 40 kB 00:00 (58/151): libidn2-2.3.4-3.fc39.x86_64.rpm 3.6 MB/s | 117 kB 00:00 (59/151): libmount-2.39.2-1.fc39.x86_64.rpm 4.6 MB/s | 155 kB 00:00 (60/151): libnsl2-2.0.0-6.fc39.x86_64.rpm 930 kB/s | 30 kB 00:00 (61/151): libpkgconf-1.9.5-2.fc39.x86_64.rpm 1.1 MB/s | 38 kB 00:00 (62/151): libpsl-0.21.2-4.fc39.x86_64.rpm 1.9 MB/s | 63 kB 00:00 (63/151): libpwquality-1.4.5-6.fc39.x86_64.rpm 3.5 MB/s | 120 kB 00:00 (64/151): libselinux-3.5-5.fc39.x86_64.rpm 2.5 MB/s | 87 kB 00:00 (65/151): libsemanage-3.5-4.fc39.x86_64.rpm 3.7 MB/s | 120 kB 00:00 (66/151): libsepol-3.5-2.fc39.x86_64.rpm 9.2 MB/s | 324 kB 00:00 (67/151): libsigsegv-2.14-5.fc39.x86_64.rpm 785 kB/s | 27 kB 00:00 (68/151): libsmartcols-2.39.2-1.fc39.x86_64.rpm 2.1 MB/s | 67 kB 00:00 (69/151): libssh-0.10.5-2.fc39.x86_64.rpm 6.3 MB/s | 211 kB 00:00 (70/151): libssh-config-0.10.5-2.fc39.noarch.rp 287 kB/s | 9.2 kB 00:00 (71/151): libtasn1-4.19.0-3.fc39.x86_64.rpm 2.4 MB/s | 74 kB 00:00 (72/151): 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542 kB 00:00 (145/151): pyproject-srpm-macros-1.10.0-1.fc39. 1.5 MB/s | 14 kB 00:00 (146/151): qt5-srpm-macros-5.15.11-1.fc39.noarc 882 kB/s | 8.3 kB 00:00 (147/151): qt6-srpm-macros-6.6.0-1.fc39.noarch. 1.0 MB/s | 8.6 kB 00:00 (148/151): rpmautospec-rpm-macros-0.3.8-1.fc39. 1.0 MB/s | 9.0 kB 00:00 (149/151): rust-srpm-macros-25.2-2.fc39.noarch. 1.4 MB/s | 13 kB 00:00 (150/151): shadow-utils-4.14.0-2.fc39.x86_64.rp 33 MB/s | 1.3 MB 00:00 (151/151): gdb-minimal-13.2-10.fc39.x86_64.rpm 13 MB/s | 4.2 MB 00:00 -------------------------------------------------------------------------------- Total 18 MB/s | 52 MB 00:02 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.x86_64 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-4.fc39.x86_64 1/151 Running scriptlet: libgcc-13.2.1-4.fc39.x86_64 1/151 Installing : crypto-policies-20231113-1.gitb402e82.fc39.noarc 2/151 Running scriptlet: crypto-policies-20231113-1.gitb402e82.fc39.noarc 2/151 Installing : fedora-release-identity-basic-39-30.noarch 3/151 Installing : fedora-gpg-keys-39-1.noarch 4/151 Installing : fedora-repos-39-1.noarch 5/151 Installing : fedora-release-common-39-30.noarch 6/151 Installing : fedora-release-39-30.noarch 7/151 Installing : setup-2.14.4-1.fc39.noarch 8/151 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.4-1.fc39.noarch 8/151 Installing : filesystem-3.18-6.fc39.x86_64 9/151 Installing : basesystem-11-18.fc39.noarch 10/151 Installing : rust-srpm-macros-25.2-2.fc39.noarch 11/151 Installing : qt6-srpm-macros-6.6.0-1.fc39.noarch 12/151 Installing : qt5-srpm-macros-5.15.11-1.fc39.noarch 13/151 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elfutils-default-yama-scope-0.190-1.fc39.noarch 103/151 Installing : libssh-config-0.10.5-2.fc39.noarch 104/151 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 105/151 Installing : gnat-srpm-macros-6-3.fc39.noarch 106/151 Installing : ghc-srpm-macros-1.6.1-2.fc39.noarch 107/151 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 108/151 Installing : coreutils-common-9.3-4.fc39.x86_64 109/151 Installing : openssl-libs-1:3.1.1-4.fc39.x86_64 110/151 Installing : coreutils-9.3-4.fc39.x86_64 111/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 112/151 Installing : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 112/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 112/151 Installing : krb5-libs-1.21.2-2.fc39.x86_64 113/151 Installing : libtirpc-1.3.4-0.fc39.x86_64 114/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 115/151 Installing : authselect-libs-1.4.3-1.fc39.x86_64 115/151 Installing : gzip-1.12-6.fc39.x86_64 116/151 Installing : cracklib-2.9.11-2.fc39.x86_64 117/151 Installing : libpwquality-1.4.5-6.fc39.x86_64 118/151 Installing : authselect-1.4.3-1.fc39.x86_64 119/151 Installing : libnsl2-2.0.0-6.fc39.x86_64 120/151 Installing : pam-1.5.3-3.fc39.x86_64 121/151 Installing : libssh-0.10.5-2.fc39.x86_64 122/151 Installing : libarchive-3.7.1-1.fc39.x86_64 123/151 Installing : libevent-2.1.12-9.fc39.x86_64 124/151 Installing : openldap-2.6.6-1.fc39.x86_64 125/151 Installing : libcurl-8.2.1-3.fc39.x86_64 126/151 Installing : elfutils-libs-0.190-1.fc39.x86_64 127/151 Installing : elfutils-debuginfod-client-0.190-1.fc39.x86_64 128/151 Installing : binutils-gold-2.40-13.fc39.x86_64 129/151 Running scriptlet: binutils-gold-2.40-13.fc39.x86_64 129/151 Installing : binutils-2.40-13.fc39.x86_64 130/151 Running scriptlet: binutils-2.40-13.fc39.x86_64 130/151 Installing : elfutils-0.190-1.fc39.x86_64 131/151 Installing : gdb-minimal-13.2-10.fc39.x86_64 132/151 Installing : debugedit-5.0-10.fc39.x86_64 133/151 Installing : curl-8.2.1-3.fc39.x86_64 134/151 Installing : rpm-sequoia-1.5.0-1.fc39.x86_64 135/151 Installing : rpm-libs-4.19.0-1.fc39.x86_64 136/151 Running scriptlet: rpm-4.19.0-1.fc39.x86_64 137/151 Installing : rpm-4.19.0-1.fc39.x86_64 137/151 Installing : efi-srpm-macros-5-9.fc39.noarch 138/151 Installing : lua-srpm-macros-1-9.fc39.noarch 139/151 Installing : rpmautospec-rpm-macros-0.3.8-1.fc39.noarch 140/151 Installing : rpm-build-libs-4.19.0-1.fc39.x86_64 141/151 Installing : ansible-srpm-macros-1-11.fc39.noarch 142/151 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 143/151 Installing : python-srpm-macros-3.12-4.fc39.noarch 144/151 Installing : go-srpm-macros-3.3.1-1.fc39.noarch 145/151 Installing : redhat-rpm-config-262-1.fc39.noarch 146/151 Installing : rpm-build-4.19.0-1.fc39.x86_64 147/151 Installing : pyproject-srpm-macros-1.10.0-1.fc39.noarch 148/151 Installing : util-linux-2.39.2-1.fc39.x86_64 149/151 Installing : which-2.21-40.fc39.x86_64 150/151 Installing : info-7.0.3-3.fc39.x86_64 151/151 Running scriptlet: filesystem-3.18-6.fc39.x86_64 151/151 Running scriptlet: ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 151/151 Running scriptlet: authselect-libs-1.4.3-1.fc39.x86_64 151/151 Running scriptlet: rpm-4.19.0-1.fc39.x86_64 151/151 Running scriptlet: info-7.0.3-3.fc39.x86_64 151/151 Verifying : alternatives-1.25-1.fc39.x86_64 1/151 Verifying : ansible-srpm-macros-1-11.fc39.noarch 2/151 Verifying : authselect-1.4.3-1.fc39.x86_64 3/151 Verifying : authselect-libs-1.4.3-1.fc39.x86_64 4/151 Verifying : basesystem-11-18.fc39.noarch 5/151 Verifying : binutils-2.40-13.fc39.x86_64 6/151 Verifying : binutils-gold-2.40-13.fc39.x86_64 7/151 Verifying : bzip2-1.0.8-16.fc39.x86_64 8/151 Verifying : bzip2-libs-1.0.8-16.fc39.x86_64 9/151 Verifying : ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch 10/151 Verifying : coreutils-9.3-4.fc39.x86_64 11/151 Verifying : coreutils-common-9.3-4.fc39.x86_64 12/151 Verifying : cpio-2.14-4.fc39.x86_64 13/151 Verifying : cracklib-2.9.11-2.fc39.x86_64 14/151 Verifying : curl-8.2.1-3.fc39.x86_64 15/151 Verifying : cyrus-sasl-lib-2.1.28-11.fc39.x86_64 16/151 Verifying : debugedit-5.0-10.fc39.x86_64 17/151 Verifying : diffutils-3.10-3.fc39.x86_64 18/151 Verifying : dwz-0.15-3.fc39.x86_64 19/151 Verifying : ed-1.19-4.fc39.x86_64 20/151 Verifying : efi-srpm-macros-5-9.fc39.noarch 21/151 Verifying : fedora-gpg-keys-39-1.noarch 22/151 Verifying : fedora-release-39-30.noarch 23/151 Verifying : fedora-release-common-39-30.noarch 24/151 Verifying : fedora-release-identity-basic-39-30.noarch 25/151 Verifying : fedora-repos-39-1.noarch 26/151 Verifying : file-5.44-5.fc39.x86_64 27/151 Verifying : file-libs-5.44-5.fc39.x86_64 28/151 Verifying : filesystem-3.18-6.fc39.x86_64 29/151 Verifying : findutils-1:4.9.0-5.fc39.x86_64 30/151 Verifying : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 31/151 Verifying : fpc-srpm-macros-1.3-8.fc39.noarch 32/151 Verifying : gawk-5.2.2-2.fc39.x86_64 33/151 Verifying : gdbm-libs-1:1.23-4.fc39.x86_64 34/151 Verifying : ghc-srpm-macros-1.6.1-2.fc39.noarch 35/151 Verifying : gmp-1:6.2.1-5.fc39.x86_64 36/151 Verifying : gnat-srpm-macros-6-3.fc39.noarch 37/151 Verifying : grep-3.11-3.fc39.x86_64 38/151 Verifying : gzip-1.12-6.fc39.x86_64 39/151 Verifying : info-7.0.3-3.fc39.x86_64 40/151 Verifying : jansson-2.13.1-7.fc39.x86_64 41/151 Verifying : kernel-srpm-macros-1.0-20.fc39.noarch 42/151 Verifying : keyutils-libs-1.6.1-7.fc39.x86_64 43/151 Verifying : libacl-2.3.1-8.fc39.x86_64 44/151 Verifying : libarchive-3.7.1-1.fc39.x86_64 45/151 Verifying : libattr-2.5.1-8.fc39.x86_64 46/151 Verifying : libblkid-2.39.2-1.fc39.x86_64 47/151 Verifying : libbrotli-1.1.0-1.fc39.x86_64 48/151 Verifying : libcap-2.48-7.fc39.x86_64 49/151 Verifying : libcap-ng-0.8.3-8.fc39.x86_64 50/151 Verifying : libcom_err-1.47.0-2.fc39.x86_64 51/151 Verifying : libcurl-8.2.1-3.fc39.x86_64 52/151 Verifying : libdb-5.3.28-56.fc39.x86_64 53/151 Verifying : libeconf-0.5.2-1.fc39.x86_64 54/151 Verifying : libevent-2.1.12-9.fc39.x86_64 55/151 Verifying : libfdisk-2.39.2-1.fc39.x86_64 56/151 Verifying : libffi-3.4.4-4.fc39.x86_64 57/151 Verifying : libidn2-2.3.4-3.fc39.x86_64 58/151 Verifying : libmount-2.39.2-1.fc39.x86_64 59/151 Verifying : libnsl2-2.0.0-6.fc39.x86_64 60/151 Verifying : libpkgconf-1.9.5-2.fc39.x86_64 61/151 Verifying : libpsl-0.21.2-4.fc39.x86_64 62/151 Verifying : libpwquality-1.4.5-6.fc39.x86_64 63/151 Verifying : libselinux-3.5-5.fc39.x86_64 64/151 Verifying : libsemanage-3.5-4.fc39.x86_64 65/151 Verifying : libsepol-3.5-2.fc39.x86_64 66/151 Verifying : libsigsegv-2.14-5.fc39.x86_64 67/151 Verifying : libsmartcols-2.39.2-1.fc39.x86_64 68/151 Verifying : libssh-0.10.5-2.fc39.x86_64 69/151 Verifying : libssh-config-0.10.5-2.fc39.noarch 70/151 Verifying : libtasn1-4.19.0-3.fc39.x86_64 71/151 Verifying : libunistring-1.1-5.fc39.x86_64 72/151 Verifying : libutempter-1.2.1-10.fc39.x86_64 73/151 Verifying : libuuid-2.39.2-1.fc39.x86_64 74/151 Verifying : libverto-0.3.2-6.fc39.x86_64 75/151 Verifying : libxcrypt-4.4.36-2.fc39.x86_64 76/151 Verifying : libxml2-2.10.4-3.fc39.x86_64 77/151 Verifying : libzstd-1.5.5-4.fc39.x86_64 78/151 Verifying : lua-libs-5.4.6-3.fc39.x86_64 79/151 Verifying : lua-srpm-macros-1-9.fc39.noarch 80/151 Verifying : lz4-libs-1.9.4-4.fc39.x86_64 81/151 Verifying : mpfr-4.2.0-3.fc39.x86_64 82/151 Verifying : ncurses-base-6.4-7.20230520.fc39.noarch 83/151 Verifying : ncurses-libs-6.4-7.20230520.fc39.x86_64 84/151 Verifying : ocaml-srpm-macros-8-2.fc39.noarch 85/151 Verifying : openblas-srpm-macros-2-14.fc39.noarch 86/151 Verifying : openldap-2.6.6-1.fc39.x86_64 87/151 Verifying : openssl-libs-1:3.1.1-4.fc39.x86_64 88/151 Verifying : package-notes-srpm-macros-0.5-9.fc39.noarch 89/151 Verifying : patch-2.7.6-22.fc39.x86_64 90/151 Verifying : pcre2-10.42-1.fc39.2.x86_64 91/151 Verifying : pcre2-syntax-10.42-1.fc39.2.noarch 92/151 Verifying : perl-srpm-macros-1-51.fc39.noarch 93/151 Verifying : pkgconf-1.9.5-2.fc39.x86_64 94/151 Verifying : pkgconf-m4-1.9.5-2.fc39.noarch 95/151 Verifying : pkgconf-pkg-config-1.9.5-2.fc39.x86_64 96/151 Verifying : popt-1.19-3.fc39.x86_64 97/151 Verifying : publicsuffix-list-dafsa-20230812-1.fc39.noarch 98/151 Verifying : python-srpm-macros-3.12-4.fc39.noarch 99/151 Verifying : readline-8.2-4.fc39.x86_64 100/151 Verifying : redhat-rpm-config-262-1.fc39.noarch 101/151 Verifying : rpm-4.19.0-1.fc39.x86_64 102/151 Verifying : rpm-build-4.19.0-1.fc39.x86_64 103/151 Verifying : rpm-build-libs-4.19.0-1.fc39.x86_64 104/151 Verifying : rpm-libs-4.19.0-1.fc39.x86_64 105/151 Verifying : rpm-sequoia-1.5.0-1.fc39.x86_64 106/151 Verifying : sed-4.8-14.fc39.x86_64 107/151 Verifying : setup-2.14.4-1.fc39.noarch 108/151 Verifying : sqlite-libs-3.42.0-7.fc39.x86_64 109/151 Verifying : systemd-libs-254.5-2.fc39.x86_64 110/151 Verifying : tar-2:1.35-2.fc39.x86_64 111/151 Verifying : unzip-6.0-62.fc39.x86_64 112/151 Verifying : util-linux-2.39.2-1.fc39.x86_64 113/151 Verifying : util-linux-core-2.39.2-1.fc39.x86_64 114/151 Verifying : which-2.21-40.fc39.x86_64 115/151 Verifying : xxhash-libs-0.8.2-1.fc39.x86_64 116/151 Verifying : xz-5.4.4-1.fc39.x86_64 117/151 Verifying : xz-libs-5.4.4-1.fc39.x86_64 118/151 Verifying : zip-3.0-39.fc39.x86_64 119/151 Verifying : zlib-1.2.13-4.fc39.x86_64 120/151 Verifying : zstd-1.5.5-4.fc39.x86_64 121/151 Verifying : audit-libs-3.1.2-5.fc39.x86_64 122/151 Verifying : bash-5.2.21-1.fc39.x86_64 123/151 Verifying : crypto-policies-20231113-1.gitb402e82.fc39.noarc 124/151 Verifying : elfutils-0.190-1.fc39.x86_64 125/151 Verifying : elfutils-debuginfod-client-0.190-1.fc39.x86_64 126/151 Verifying : elfutils-default-yama-scope-0.190-1.fc39.noarch 127/151 Verifying : elfutils-libelf-0.190-1.fc39.x86_64 128/151 Verifying : elfutils-libs-0.190-1.fc39.x86_64 129/151 Verifying : gdb-minimal-13.2-10.fc39.x86_64 130/151 Verifying : glibc-2.38-11.fc39.x86_64 131/151 Verifying : glibc-common-2.38-11.fc39.x86_64 132/151 Verifying : glibc-gconv-extra-2.38-11.fc39.x86_64 133/151 Verifying : glibc-minimal-langpack-2.38-11.fc39.x86_64 134/151 Verifying : go-srpm-macros-3.3.1-1.fc39.noarch 135/151 Verifying : krb5-libs-1.21.2-2.fc39.x86_64 136/151 Verifying : libgcc-13.2.1-4.fc39.x86_64 137/151 Verifying : libgomp-13.2.1-4.fc39.x86_64 138/151 Verifying : libnghttp2-1.55.1-4.fc39.x86_64 139/151 Verifying : libstdc++-13.2.1-4.fc39.x86_64 140/151 Verifying : libtirpc-1.3.4-0.fc39.x86_64 141/151 Verifying : p11-kit-0.25.3-1.fc39.x86_64 142/151 Verifying : p11-kit-trust-0.25.3-1.fc39.x86_64 143/151 Verifying : pam-1.5.3-3.fc39.x86_64 144/151 Verifying : pam-libs-1.5.3-3.fc39.x86_64 145/151 Verifying : pyproject-srpm-macros-1.10.0-1.fc39.noarch 146/151 Verifying : qt5-srpm-macros-5.15.11-1.fc39.noarch 147/151 Verifying : qt6-srpm-macros-6.6.0-1.fc39.noarch 148/151 Verifying : rpmautospec-rpm-macros-0.3.8-1.fc39.noarch 149/151 Verifying : rust-srpm-macros-25.2-2.fc39.noarch 150/151 Verifying : shadow-utils-2:4.14.0-2.fc39.x86_64 151/151 Installed products updated. Installed: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231113-1.gitb402e82.fc39.noarch curl-8.2.1-3.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-1.fc39.x86_64 elfutils-debuginfod-client-0.190-1.fc39.x86_64 elfutils-default-yama-scope-0.190-1.fc39.noarch elfutils-libelf-0.190-1.fc39.x86_64 elfutils-libs-0.190-1.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-30.noarch fedora-release-common-39-30.noarch fedora-release-identity-basic-39-30.noarch fedora-repos-39-1.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-1:4.9.0-5.fc39.x86_64 fonts-srpm-macros-1:2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-10.fc39.x86_64 gdbm-libs-1:1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-11.fc39.x86_64 glibc-common-2.38-11.fc39.x86_64 glibc-gconv-extra-2.38-11.fc39.x86_64 glibc-minimal-langpack-2.38-11.fc39.x86_64 gmp-1:6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.2-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-3.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-4.fc39.x86_64 libgomp-13.2.1-4.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-1:3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.10.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.0-1.fc39.x86_64 rpm-build-4.19.0-1.fc39.x86_64 rpm-build-libs-4.19.0-1.fc39.x86_64 rpm-libs-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.3.8-1.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.5-2.fc39.x86_64 tar-2:1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc39.x86_64 util-linux-core-2.39.2-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.x86_64 ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc39.x86_64 authselect-1.4.3-1.fc39.x86_64 authselect-libs-1.4.3-1.fc39.x86_64 basesystem-11-18.fc39.noarch bash-5.2.21-1.fc39.x86_64 binutils-2.40-13.fc39.x86_64 binutils-gold-2.40-13.fc39.x86_64 bzip2-1.0.8-16.fc39.x86_64 bzip2-libs-1.0.8-16.fc39.x86_64 ca-certificates-2023.2.60_v7.0.306-2.fc39.noarch coreutils-9.3-4.fc39.x86_64 coreutils-common-9.3-4.fc39.x86_64 cpio-2.14-4.fc39.x86_64 cracklib-2.9.11-2.fc39.x86_64 crypto-policies-20231113-1.gitb402e82.fc39.noarch curl-8.2.1-3.fc39.x86_64 cyrus-sasl-lib-2.1.28-11.fc39.x86_64 debugedit-5.0-10.fc39.x86_64 diffutils-3.10-3.fc39.x86_64 dwz-0.15-3.fc39.x86_64 ed-1.19-4.fc39.x86_64 efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-1.fc39.x86_64 elfutils-debuginfod-client-0.190-1.fc39.x86_64 elfutils-default-yama-scope-0.190-1.fc39.noarch elfutils-libelf-0.190-1.fc39.x86_64 elfutils-libs-0.190-1.fc39.x86_64 fedora-gpg-keys-39-1.noarch fedora-release-39-30.noarch fedora-release-common-39-30.noarch fedora-release-identity-basic-39-30.noarch fedora-repos-39-1.noarch file-5.44-5.fc39.x86_64 file-libs-5.44-5.fc39.x86_64 filesystem-3.18-6.fc39.x86_64 findutils-4.9.0-5.fc39.x86_64 fonts-srpm-macros-2.0.5-12.fc39.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.x86_64 gdb-minimal-13.2-10.fc39.x86_64 gdbm-libs-1.23-4.fc39.x86_64 ghc-srpm-macros-1.6.1-2.fc39.noarch glibc-2.38-11.fc39.x86_64 glibc-common-2.38-11.fc39.x86_64 glibc-gconv-extra-2.38-11.fc39.x86_64 glibc-minimal-langpack-2.38-11.fc39.x86_64 gmp-6.2.1-5.fc39.x86_64 gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc39.noarch gpg-pubkey-18b8e74c-62f2920f grep-3.11-3.fc39.x86_64 gzip-1.12-6.fc39.x86_64 info-7.0.3-3.fc39.x86_64 jansson-2.13.1-7.fc39.x86_64 kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.x86_64 krb5-libs-1.21.2-2.fc39.x86_64 libacl-2.3.1-8.fc39.x86_64 libarchive-3.7.1-1.fc39.x86_64 libattr-2.5.1-8.fc39.x86_64 libblkid-2.39.2-1.fc39.x86_64 libbrotli-1.1.0-1.fc39.x86_64 libcap-2.48-7.fc39.x86_64 libcap-ng-0.8.3-8.fc39.x86_64 libcom_err-1.47.0-2.fc39.x86_64 libcurl-8.2.1-3.fc39.x86_64 libdb-5.3.28-56.fc39.x86_64 libeconf-0.5.2-1.fc39.x86_64 libevent-2.1.12-9.fc39.x86_64 libfdisk-2.39.2-1.fc39.x86_64 libffi-3.4.4-4.fc39.x86_64 libgcc-13.2.1-4.fc39.x86_64 libgomp-13.2.1-4.fc39.x86_64 libidn2-2.3.4-3.fc39.x86_64 libmount-2.39.2-1.fc39.x86_64 libnghttp2-1.55.1-4.fc39.x86_64 libnsl2-2.0.0-6.fc39.x86_64 libpkgconf-1.9.5-2.fc39.x86_64 libpsl-0.21.2-4.fc39.x86_64 libpwquality-1.4.5-6.fc39.x86_64 libselinux-3.5-5.fc39.x86_64 libsemanage-3.5-4.fc39.x86_64 libsepol-3.5-2.fc39.x86_64 libsigsegv-2.14-5.fc39.x86_64 libsmartcols-2.39.2-1.fc39.x86_64 libssh-0.10.5-2.fc39.x86_64 libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc39.x86_64 libtasn1-4.19.0-3.fc39.x86_64 libtirpc-1.3.4-0.fc39.x86_64 libunistring-1.1-5.fc39.x86_64 libutempter-1.2.1-10.fc39.x86_64 libuuid-2.39.2-1.fc39.x86_64 libverto-0.3.2-6.fc39.x86_64 libxcrypt-4.4.36-2.fc39.x86_64 libxml2-2.10.4-3.fc39.x86_64 libzstd-1.5.5-4.fc39.x86_64 lua-libs-5.4.6-3.fc39.x86_64 lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.x86_64 mpfr-4.2.0-3.fc39.x86_64 ncurses-base-6.4-7.20230520.fc39.noarch ncurses-libs-6.4-7.20230520.fc39.x86_64 ocaml-srpm-macros-8-2.fc39.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.x86_64 openssl-libs-3.1.1-4.fc39.x86_64 p11-kit-0.25.3-1.fc39.x86_64 p11-kit-trust-0.25.3-1.fc39.x86_64 package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-3.fc39.x86_64 pam-libs-1.5.3-3.fc39.x86_64 patch-2.7.6-22.fc39.x86_64 pcre2-10.42-1.fc39.2.x86_64 pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.x86_64 pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.x86_64 popt-1.19-3.fc39.x86_64 publicsuffix-list-dafsa-20230812-1.fc39.noarch pyproject-srpm-macros-1.10.0-1.fc39.noarch python-srpm-macros-3.12-4.fc39.noarch qt5-srpm-macros-5.15.11-1.fc39.noarch qt6-srpm-macros-6.6.0-1.fc39.noarch readline-8.2-4.fc39.x86_64 redhat-rpm-config-262-1.fc39.noarch rpm-4.19.0-1.fc39.x86_64 rpm-build-4.19.0-1.fc39.x86_64 rpm-build-libs-4.19.0-1.fc39.x86_64 rpm-libs-4.19.0-1.fc39.x86_64 rpm-sequoia-1.5.0-1.fc39.x86_64 rpmautospec-rpm-macros-0.3.8-1.fc39.noarch rust-srpm-macros-25.2-2.fc39.noarch sed-4.8-14.fc39.x86_64 setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc39.x86_64 sqlite-libs-3.42.0-7.fc39.x86_64 systemd-libs-254.5-2.fc39.x86_64 tar-1.35-2.fc39.x86_64 unzip-6.0-62.fc39.x86_64 util-linux-2.39.2-1.fc39.x86_64 util-linux-core-2.39.2-1.fc39.x86_64 which-2.21-40.fc39.x86_64 xxhash-libs-0.8.2-1.fc39.x86_64 xz-5.4.4-1.fc39.x86_64 xz-libs-5.4.4-1.fc39.x86_64 zip-3.0-39.fc39.x86_64 zlib-1.2.13-4.fc39.x86_64 zstd-1.5.5-4.fc39.x86_64 Start: buildsrpm Start: rpmbuild -bs warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-3y43u_55/R-CRAN-malan/R-CRAN-malan.spec) Config(child) 0 minutes 55 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm) Config(fedora-39-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1701222189.587506/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.18.2-1.fc38.x86_64 rpm-sequoia-1.4.0-3.fc38.x86_64 python3-dnf-4.18.1-1.fc38.noarch python3-dnf-plugins-core-4.4.3-1.fc38.noarch yum-4.18.1-1.fc38.noarch Start: build phase for R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm Start: build setup for R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 23 kB/s | 1.5 kB 00:00 Copr repository 63 MB/s | 25 MB 00:00 fedora 509 kB/s | 24 kB 00:00 updates 466 kB/s | 23 kB 00:00 Dependencies resolved. ======================================================================================== Package Arch Version Repo Size ======================================================================================== Installing: R-CRAN-Rcpp x86_64 1.0.11-1.fc39.copr6279302 copr_base 2.0 M R-CRAN-RcppArmadillo x86_64 0.12.6.6.0-1.fc39.copr6589779 copr_base 935 k R-CRAN-RcppProgress noarch 0.4.2-3.fc39.copr6279637 copr_base 35 k R-CRAN-dplyr x86_64 1.1.4-1.fc39.copr6691319 copr_base 1.5 M R-CRAN-igraph x86_64 1.5.1-1.fc39.copr6664799 copr_base 4.4 M R-CRAN-magrittr x86_64 2.0.3-1.fc39.copr6279321 copr_base 222 k R-CRAN-tibble x86_64 3.2.1-1.fc39.copr6288598 copr_base 632 k R-CRAN-tidygraph x86_64 1.2.3-1.fc39.copr6293533 copr_base 571 k R-core x86_64 4.3.2-1.fc39 updates 64 M R-devel x86_64 4.3.2-1.fc39 updates 10 k Installing dependencies: R-CRAN-Matrix x86_64 1.6.3-1.fc39.copr6636945 copr_base 4.1 M R-CRAN-R6 noarch 2.5.1-1.fc39.copr6279323 copr_base 96 k R-CRAN-cli x86_64 3.6.1-1.fc39.copr6279347 copr_base 1.3 M R-CRAN-fansi x86_64 1.0.5-1.fc39.copr6506680 copr_base 339 k R-CRAN-generics noarch 0.1.3-1.fc39.copr6279393 copr_base 100 k R-CRAN-glue x86_64 1.6.2-1.fc39.copr6279303 copr_base 162 k R-CRAN-lattice x86_64 0.22.5-1.fc39.copr6562879 copr_base 1.4 M R-CRAN-lifecycle noarch 1.0.4-1.fc39.copr6614518 copr_base 130 k R-CRAN-pillar noarch 1.9.0-1.fc39.copr6286818 copr_base 626 k R-CRAN-pkgconfig noarch 2.0.3-3.fc39.copr6279322 copr_base 30 k R-CRAN-purrr x86_64 1.0.2-1.fc39.copr6286812 copr_base 546 k R-CRAN-rlang x86_64 1.1.2-1.fc39.copr6598950 copr_base 1.6 M R-CRAN-stringi x86_64 1.8.2-1.fc39.copr6686191 copr_base 993 k R-CRAN-stringr noarch 1.5.1-1.fc39.copr6636964 copr_base 319 k R-CRAN-tidyr x86_64 1.3.0-1.fc39.copr6290987 copr_base 1.1 M R-CRAN-tidyselect noarch 1.2.0-1.fc39.copr6286814 copr_base 232 k R-CRAN-utf8 x86_64 1.2.4-1.fc39.copr6555966 copr_base 150 k R-CRAN-vctrs x86_64 0.6.4-1.fc39.copr6524681 copr_base 1.3 M R-CRAN-withr noarch 2.5.2-1.fc39.copr6583488 copr_base 255 k R-core-devel x86_64 4.3.2-1.fc39 updates 93 k R-java x86_64 4.3.2-1.fc39 updates 11 k R-java-devel x86_64 4.3.2-1.fc39 updates 10 k R-littler x86_64 0.3.18-4.fc39 fedora 76 k R-rpm-macros noarch 1.2.1-7.fc39 fedora 11 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k alsa-lib x86_64 1.2.10-3.fc39 fedora 522 k annobin-docs noarch 12.30-1.fc39 updates 92 k annobin-plugin-gcc x86_64 12.30-1.fc39 updates 959 k avahi-libs x86_64 0.8-24.fc39 fedora 67 k brotli x86_64 1.1.0-1.fc39 fedora 20 k brotli-devel x86_64 1.1.0-1.fc39 fedora 34 k bzip2-devel x86_64 1.0.8-16.fc39 fedora 214 k cairo x86_64 1.18.0-1.fc39 fedora 710 k cmake-filesystem x86_64 3.27.7-1.fc39 fedora 19 k copy-jdk-configs noarch 4.1-3.fc39 fedora 28 k cpp x86_64 13.2.1-4.fc39 updates 11 M crypto-policies-scripts noarch 20231113-1.gitb402e82.fc39 updates 117 k cups-libs x86_64 1:2.4.7-2.fc39 updates 269 k dbus-libs x86_64 1:1.14.10-1.fc39 fedora 156 k default-fonts-core-sans noarch 4.0-9.fc39 fedora 32 k desktop-file-utils x86_64 0.26-9.fc39 fedora 72 k emacs-filesystem noarch 1:29.1-2.fc39 fedora 7.1 k expat x86_64 2.5.0-3.fc39 fedora 110 k flexiblas x86_64 3.3.1-5.fc39 fedora 33 k flexiblas-devel x86_64 3.3.1-5.fc39 fedora 117 k flexiblas-netlib x86_64 3.3.1-5.fc39 fedora 3.1 M flexiblas-netlib64 x86_64 3.3.1-5.fc39 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.3.1-5.fc39 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.3.1-5.fc39 fedora 17 k fontconfig x86_64 2.14.2-5.fc39 fedora 297 k fontconfig-devel x86_64 2.14.2-5.fc39 fedora 165 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype x86_64 2.13.1-2.fc39 fedora 414 k freetype-devel x86_64 2.13.1-2.fc39 fedora 950 k fribidi x86_64 1.0.13-2.fc39 fedora 91 k gc x86_64 8.2.2-4.fc39 fedora 110 k gcc x86_64 13.2.1-4.fc39 updates 34 M gcc-c++ x86_64 13.2.1-4.fc39 updates 13 M gcc-gfortran x86_64 13.2.1-4.fc39 updates 12 M gcc-plugin-annobin x86_64 13.2.1-4.fc39 updates 48 k gettext x86_64 0.22-2.fc39 fedora 1.1 M gettext-envsubst x86_64 0.22-2.fc39 fedora 36 k gettext-libs x86_64 0.22-2.fc39 fedora 328 k gettext-runtime x86_64 0.22-2.fc39 fedora 120 k glib2 x86_64 2.78.1-1.fc39 updates 2.8 M glib2-devel x86_64 2.78.1-1.fc39 updates 595 k glibc-devel x86_64 2.38-11.fc39 updates 83 k glibc-headers-x86 noarch 2.38-11.fc39 updates 568 k glpk x86_64 5.0-7.fc39 fedora 387 k gnutls x86_64 3.8.1-1.fc39 fedora 1.1 M google-noto-fonts-common noarch 20230801-4.fc39 updates 17 k google-noto-sans-vf-fonts noarch 20230801-4.fc39 updates 583 k graphite2 x86_64 1.3.14-12.fc39 fedora 95 k graphite2-devel x86_64 1.3.14-12.fc39 fedora 20 k guile22 x86_64 2.2.7-9.fc39 fedora 6.5 M harfbuzz x86_64 8.2.1-2.fc39 fedora 975 k harfbuzz-devel x86_64 8.2.1-2.fc39 fedora 450 k harfbuzz-icu x86_64 8.2.1-2.fc39 fedora 17 k java-17-openjdk x86_64 1:17.0.8.0.7-1.fc39 fedora 407 k java-17-openjdk-devel x86_64 1:17.0.8.0.7-1.fc39 fedora 4.7 M java-17-openjdk-headless x86_64 1:17.0.8.0.7-1.fc39 fedora 44 M javapackages-filesystem noarch 6.1.0-10.fc39 fedora 12 k jbigkit-libs x86_64 2.1-26.fc39 fedora 53 k kernel-headers x86_64 6.5.4-300.fc39 fedora 1.5 M libICE x86_64 1.0.10-11.fc39 fedora 70 k libRmath x86_64 4.3.2-1.fc39 updates 122 k libRmath-devel x86_64 4.3.2-1.fc39 updates 16 k libSM x86_64 1.2.3-13.fc39 fedora 41 k libX11 x86_64 1.8.7-1.fc39 fedora 650 k libX11-common noarch 1.8.7-1.fc39 fedora 176 k libX11-devel x86_64 1.8.7-1.fc39 fedora 1.0 M libX11-xcb x86_64 1.8.7-1.fc39 fedora 12 k libXau x86_64 1.0.11-3.fc39 fedora 31 k libXau-devel x86_64 1.0.11-3.fc39 fedora 14 k libXcomposite x86_64 0.4.5-10.fc39 fedora 23 k libXext x86_64 1.3.5-3.fc39 fedora 39 k libXft x86_64 2.3.8-3.fc39 fedora 72 k libXft-devel x86_64 2.3.8-3.fc39 fedora 50 k libXi x86_64 1.8.1-2.fc39 fedora 40 k libXmu x86_64 1.1.4-3.fc39 fedora 76 k libXrender x86_64 0.9.11-3.fc39 fedora 27 k libXrender-devel x86_64 0.9.11-3.fc39 fedora 19 k libXt x86_64 1.2.1-5.fc39 fedora 178 k libXtst x86_64 1.2.4-3.fc39 fedora 20 k libb2 x86_64 0.98.1-9.fc39 fedora 25 k libblkid-devel x86_64 2.39.2-1.fc39 fedora 18 k libdatrie x86_64 0.2.13-7.fc39 fedora 32 k libffi-devel x86_64 3.4.4-4.fc39 fedora 29 k libfontenc x86_64 1.1.6-3.fc39 fedora 32 k libgfortran x86_64 13.2.1-4.fc39 updates 900 k libicu x86_64 73.2-2.fc39 fedora 11 M libicu-devel x86_64 73.2-2.fc39 fedora 924 k libjpeg-turbo x86_64 2.1.4-3.fc39 fedora 183 k liblerc x86_64 4.0.0-4.fc39 fedora 201 k libmount-devel x86_64 2.39.2-1.fc39 fedora 18 k libmpc x86_64 1.3.1-3.fc39 fedora 70 k libpng x86_64 2:1.6.37-15.fc39 fedora 119 k libpng-devel x86_64 2:1.6.37-15.fc39 fedora 291 k libquadmath x86_64 13.2.1-4.fc39 updates 196 k libquadmath-devel x86_64 13.2.1-4.fc39 updates 38 k libselinux-devel x86_64 3.5-5.fc39 fedora 151 k libsepol-devel x86_64 3.5-2.fc39 fedora 49 k libstdc++-devel x86_64 13.2.1-4.fc39 updates 2.6 M libthai x86_64 0.1.29-6.fc39 fedora 213 k libtiff x86_64 4.4.0-8.fc39 fedora 202 k libtirpc-devel x86_64 1.3.4-0.fc39 updates 125 k libtool-ltdl x86_64 2.4.7-7.fc39 fedora 36 k libwebp x86_64 1.3.2-2.fc39 fedora 284 k libxcb x86_64 1.13.1-12.fc39 fedora 233 k libxcb-devel x86_64 1.13.1-12.fc39 fedora 1.4 M libxcrypt-devel x86_64 4.4.36-2.fc39 fedora 30 k libxml2-devel x86_64 2.10.4-3.fc39 fedora 527 k lksctp-tools x86_64 1.0.19-4.fc39 fedora 92 k lua x86_64 5.4.6-3.fc39 fedora 191 k lua-posix x86_64 36.2.1-3.fc39 fedora 143 k make x86_64 1:4.4.1-2.fc39 fedora 589 k mkfontscale x86_64 1.2.2-4.fc39 fedora 32 k mpdecimal x86_64 2.5.1-7.fc39 fedora 89 k nettle x86_64 3.9.1-2.fc39 fedora 425 k nspr x86_64 4.35.0-14.fc39 fedora 136 k nss x86_64 3.94.0-2.fc39 fedora 693 k nss-softokn x86_64 3.94.0-2.fc39 fedora 411 k nss-softokn-freebl x86_64 3.94.0-2.fc39 fedora 348 k nss-sysinit x86_64 3.94.0-2.fc39 fedora 18 k nss-util x86_64 3.94.0-2.fc39 fedora 87 k openblas x86_64 0.3.21-6.fc39 fedora 35 k openblas-openmp x86_64 0.3.21-6.fc39 fedora 4.9 M openblas-openmp64 x86_64 0.3.21-6.fc39 fedora 4.8 M pango x86_64 1.51.0-1.fc39 fedora 343 k pcre2-devel x86_64 10.42-1.fc39.2 fedora 505 k pcre2-utf16 x86_64 10.42-1.fc39.2 fedora 212 k pcre2-utf32 x86_64 10.42-1.fc39.2 fedora 200 k pixman x86_64 0.42.2-2.fc39 fedora 288 k python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M python3 x86_64 3.12.0-1.fc39 fedora 26 k python3-libs x86_64 3.12.0-1.fc39 fedora 9.2 M python3-setuptools noarch 67.7.2-7.fc39 fedora 1.5 M suitesparse x86_64 5.13.0-3.fc39 fedora 1.1 M sysprof-capture-devel x86_64 45.1-1.fc39 updates 59 k tcl x86_64 1:8.6.12-5.fc39 fedora 1.1 M tcl-devel x86_64 1:8.6.12-5.fc39 fedora 169 k tk x86_64 1:8.6.12-5.fc39 fedora 1.6 M tk-devel x86_64 1:8.6.12-5.fc39 fedora 537 k tre x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 43 k tre-common noarch 0.8.0-41.20140228gitc2f5d13.fc39 fedora 31 k tre-devel x86_64 0.8.0-41.20140228gitc2f5d13.fc39 fedora 12 k ttmkfdir x86_64 3.0.9-69.fc39 fedora 56 k tzdata noarch 2023c-2.fc39 fedora 717 k tzdata-java noarch 2023c-2.fc39 fedora 208 k xdg-utils noarch 1.1.3-15.fc39 fedora 77 k xml-common noarch 0.6.3-61.fc39 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-36.fc39 fedora 504 k xorg-x11-proto-devel noarch 2023.2-2.fc39 fedora 298 k xz-devel x86_64 5.4.4-1.fc39 fedora 66 k zlib-devel x86_64 1.2.13-4.fc39 fedora 45 k Transaction Summary ======================================================================================== Install 185 Packages Total download size: 293 M Installed size: 907 M Downloading Packages: (1/185): R-CRAN-R6-2.5.1-1.fc39.copr6279323.noa 1.4 MB/s | 96 kB 00:00 (2/185): R-CRAN-Rcpp-1.0.11-1.fc39.copr6279302. 15 MB/s | 2.0 MB 00:00 (3/185): R-CRAN-RcppArmadillo-0.12.6.6.0-1.fc39 13 MB/s | 935 kB 00:00 (4/185): R-CRAN-Matrix-1.6.3-1.fc39.copr6636945 28 MB/s | 4.1 MB 00:00 (5/185): R-CRAN-RcppProgress-0.4.2-3.fc39.copr6 2.9 MB/s | 35 kB 00:00 (6/185): R-CRAN-cli-3.6.1-1.fc39.copr6279347.x8 57 MB/s | 1.3 MB 00:00 (7/185): R-CRAN-fansi-1.0.5-1.fc39.copr6506680. 10 MB/s | 339 kB 00:00 (8/185): R-CRAN-dplyr-1.1.4-1.fc39.copr6691319. 41 MB/s | 1.5 MB 00:00 (9/185): R-CRAN-generics-0.1.3-1.fc39.copr62793 4.8 MB/s | 100 kB 00:00 (10/185): R-CRAN-glue-1.6.2-1.fc39.copr6279303. 15 MB/s | 162 kB 00:00 (11/185): R-CRAN-lattice-0.22.5-1.fc39.copr6562 30 MB/s | 1.4 MB 00:00 (12/185): R-CRAN-lifecycle-1.0.4-1.fc39.copr661 3.0 MB/s | 130 kB 00:00 (13/185): R-CRAN-igraph-1.5.1-1.fc39.copr666479 60 MB/s | 4.4 MB 00:00 (14/185): R-CRAN-magrittr-2.0.3-1.fc39.copr6279 8.5 MB/s | 222 kB 00:00 (15/185): R-CRAN-pillar-1.9.0-1.fc39.copr628681 15 MB/s | 626 kB 00:00 (16/185): R-CRAN-pkgconfig-2.0.3-3.fc39.copr627 1.6 MB/s | 30 kB 00:00 (17/185): R-CRAN-purrr-1.0.2-1.fc39.copr6286812 29 MB/s | 546 kB 00:00 (18/185): R-CRAN-stringr-1.5.1-1.fc39.copr66369 8.3 MB/s | 319 kB 00:00 (19/185): R-CRAN-stringi-1.8.2-1.fc39.copr66861 23 MB/s | 993 kB 00:00 (20/185): R-CRAN-rlang-1.1.2-1.fc39.copr6598950 36 MB/s | 1.6 MB 00:00 (21/185): R-CRAN-tibble-3.2.1-1.fc39.copr628859 31 MB/s | 632 kB 00:00 (22/185): R-CRAN-tidyr-1.3.0-1.fc39.copr6290987 47 MB/s | 1.1 MB 00:00 (23/185): R-CRAN-tidyselect-1.2.0-1.fc39.copr62 15 MB/s | 232 kB 00:00 (24/185): R-CRAN-utf8-1.2.4-1.fc39.copr6555966. 12 MB/s | 150 kB 00:00 (25/185): R-CRAN-tidygraph-1.2.3-1.fc39.copr629 13 MB/s | 571 kB 00:00 (26/185): R-CRAN-vctrs-0.6.4-1.fc39.copr6524681 56 MB/s | 1.3 MB 00:00 (27/185): R-CRAN-withr-2.5.2-1.fc39.copr6583488 17 MB/s | 255 kB 00:00 (28/185): R-rpm-macros-1.2.1-7.fc39.noarch.rpm 69 kB/s | 11 kB 00:00 (29/185): R-littler-0.3.18-4.fc39.x86_64.rpm 201 kB/s | 76 kB 00:00 (30/185): abattis-cantarell-vf-fonts-0.301-10.f 303 kB/s | 121 kB 00:00 (31/185): brotli-1.1.0-1.fc39.x86_64.rpm 241 kB/s | 20 kB 00:00 (32/185): avahi-libs-0.8-24.fc39.x86_64.rpm 541 kB/s | 67 kB 00:00 (33/185): brotli-devel-1.1.0-1.fc39.x86_64.rpm 381 kB/s | 34 kB 00:00 (34/185): alsa-lib-1.2.10-3.fc39.x86_64.rpm 1.2 MB/s | 522 kB 00:00 (35/185): cmake-filesystem-3.27.7-1.fc39.x86_64 257 kB/s | 19 kB 00:00 (36/185): bzip2-devel-1.0.8-16.fc39.x86_64.rpm 1.0 MB/s | 214 kB 00:00 (37/185): copy-jdk-configs-4.1-3.fc39.noarch.rp 367 kB/s | 28 kB 00:00 (38/185): dbus-libs-1.14.10-1.fc39.x86_64.rpm 1.4 MB/s | 156 kB 00:00 (39/185): default-fonts-core-sans-4.0-9.fc39.no 425 kB/s | 32 kB 00:00 (40/185): cairo-1.18.0-1.fc39.x86_64.rpm 2.4 MB/s | 710 kB 00:00 (41/185): emacs-filesystem-29.1-2.fc39.noarch.r 97 kB/s | 7.1 kB 00:00 (42/185): desktop-file-utils-0.26-9.fc39.x86_64 818 kB/s | 72 kB 00:00 (43/185): expat-2.5.0-3.fc39.x86_64.rpm 1.3 MB/s | 110 kB 00:00 (44/185): flexiblas-3.3.1-5.fc39.x86_64.rpm 435 kB/s | 33 kB 00:00 (45/185): flexiblas-devel-3.3.1-5.fc39.x86_64.r 1.0 MB/s | 117 kB 00:00 (46/185): flexiblas-openblas-openmp-3.3.1-5.fc3 227 kB/s | 17 kB 00:00 (47/185): flexiblas-openblas-openmp64-3.3.1-5.f 202 kB/s | 17 kB 00:00 (48/185): flexiblas-netlib-3.3.1-5.fc39.x86_64. 9.3 MB/s | 3.1 MB 00:00 (49/185): flexiblas-netlib64-3.3.1-5.fc39.x86_6 9.2 MB/s | 3.0 MB 00:00 (50/185): fontconfig-2.14.2-5.fc39.x86_64.rpm 2.1 MB/s | 297 kB 00:00 (51/185): fontconfig-devel-2.14.2-5.fc39.x86_64 2.0 MB/s | 165 kB 00:00 (52/185): fonts-filesystem-2.0.5-12.fc39.noarch 105 kB/s | 8.2 kB 00:00 (53/185): freetype-devel-2.13.1-2.fc39.x86_64.r 5.1 MB/s | 950 kB 00:00 (54/185): freetype-2.13.1-2.fc39.x86_64.rpm 1.5 MB/s | 414 kB 00:00 (55/185): gc-8.2.2-4.fc39.x86_64.rpm 1.4 MB/s | 110 kB 00:00 (56/185): fribidi-1.0.13-2.fc39.x86_64.rpm 295 kB/s | 91 kB 00:00 (57/185): gettext-envsubst-0.22-2.fc39.x86_64.r 469 kB/s | 36 kB 00:00 (58/185): gettext-runtime-0.22-2.fc39.x86_64.rp 1.4 MB/s | 120 kB 00:00 (59/185): gettext-0.22-2.fc39.x86_64.rpm 3.9 MB/s | 1.1 MB 00:00 (60/185): gettext-libs-0.22-2.fc39.x86_64.rpm 1.8 MB/s | 328 kB 00:00 (61/185): glpk-5.0-7.fc39.x86_64.rpm 3.8 MB/s | 387 kB 00:00 (62/185): graphite2-1.3.14-12.fc39.x86_64.rpm 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libwebp-1.3.2-2.fc39.x86_64 111/185 Verifying : libxcb-1.13.1-12.fc39.x86_64 112/185 Verifying : libxcb-devel-1.13.1-12.fc39.x86_64 113/185 Verifying : libxcrypt-devel-4.4.36-2.fc39.x86_64 114/185 Verifying : libxml2-devel-2.10.4-3.fc39.x86_64 115/185 Verifying : lksctp-tools-1.0.19-4.fc39.x86_64 116/185 Verifying : lua-5.4.6-3.fc39.x86_64 117/185 Verifying : lua-posix-36.2.1-3.fc39.x86_64 118/185 Verifying : make-1:4.4.1-2.fc39.x86_64 119/185 Verifying : mkfontscale-1.2.2-4.fc39.x86_64 120/185 Verifying : mpdecimal-2.5.1-7.fc39.x86_64 121/185 Verifying : nettle-3.9.1-2.fc39.x86_64 122/185 Verifying : nspr-4.35.0-14.fc39.x86_64 123/185 Verifying : nss-3.94.0-2.fc39.x86_64 124/185 Verifying : nss-softokn-3.94.0-2.fc39.x86_64 125/185 Verifying : nss-softokn-freebl-3.94.0-2.fc39.x86_64 126/185 Verifying : nss-sysinit-3.94.0-2.fc39.x86_64 127/185 Verifying : nss-util-3.94.0-2.fc39.x86_64 128/185 Verifying : openblas-0.3.21-6.fc39.x86_64 129/185 Verifying : openblas-openmp-0.3.21-6.fc39.x86_64 130/185 Verifying : openblas-openmp64-0.3.21-6.fc39.x86_64 131/185 Verifying : pango-1.51.0-1.fc39.x86_64 132/185 Verifying : pcre2-devel-10.42-1.fc39.2.x86_64 133/185 Verifying : pcre2-utf16-10.42-1.fc39.2.x86_64 134/185 Verifying : pcre2-utf32-10.42-1.fc39.2.x86_64 135/185 Verifying : pixman-0.42.2-2.fc39.x86_64 136/185 Verifying : python-pip-wheel-23.2.1-1.fc39.noarch 137/185 Verifying : python3-3.12.0-1.fc39.x86_64 138/185 Verifying : python3-libs-3.12.0-1.fc39.x86_64 139/185 Verifying : python3-setuptools-67.7.2-7.fc39.noarch 140/185 Verifying : suitesparse-5.13.0-3.fc39.x86_64 141/185 Verifying : tcl-1:8.6.12-5.fc39.x86_64 142/185 Verifying : tcl-devel-1:8.6.12-5.fc39.x86_64 143/185 Verifying : tk-1:8.6.12-5.fc39.x86_64 144/185 Verifying : tk-devel-1:8.6.12-5.fc39.x86_64 145/185 Verifying : tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 146/185 Verifying : tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noar 147/185 Verifying : tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_6 148/185 Verifying : ttmkfdir-3.0.9-69.fc39.x86_64 149/185 Verifying : tzdata-2023c-2.fc39.noarch 150/185 Verifying : tzdata-java-2023c-2.fc39.noarch 151/185 Verifying : xdg-utils-1.1.3-15.fc39.noarch 152/185 Verifying : xml-common-0.6.3-61.fc39.noarch 153/185 Verifying : xorg-x11-fonts-Type1-7.5-36.fc39.noarch 154/185 Verifying : xorg-x11-proto-devel-2023.2-2.fc39.noarch 155/185 Verifying : xz-devel-5.4.4-1.fc39.x86_64 156/185 Verifying : zlib-devel-1.2.13-4.fc39.x86_64 157/185 Verifying : R-core-4.3.2-1.fc39.x86_64 158/185 Verifying : R-core-devel-4.3.2-1.fc39.x86_64 159/185 Verifying : R-devel-4.3.2-1.fc39.x86_64 160/185 Verifying : R-java-4.3.2-1.fc39.x86_64 161/185 Verifying : R-java-devel-4.3.2-1.fc39.x86_64 162/185 Verifying : annobin-docs-12.30-1.fc39.noarch 163/185 Verifying : annobin-plugin-gcc-12.30-1.fc39.x86_64 164/185 Verifying : cpp-13.2.1-4.fc39.x86_64 165/185 Verifying : crypto-policies-scripts-20231113-1.gitb402e82.fc 166/185 Verifying : cups-libs-1:2.4.7-2.fc39.x86_64 167/185 Verifying : gcc-13.2.1-4.fc39.x86_64 168/185 Verifying : gcc-c++-13.2.1-4.fc39.x86_64 169/185 Verifying : gcc-gfortran-13.2.1-4.fc39.x86_64 170/185 Verifying : gcc-plugin-annobin-13.2.1-4.fc39.x86_64 171/185 Verifying : glib2-2.78.1-1.fc39.x86_64 172/185 Verifying : glib2-devel-2.78.1-1.fc39.x86_64 173/185 Verifying : glibc-devel-2.38-11.fc39.x86_64 174/185 Verifying : glibc-headers-x86-2.38-11.fc39.noarch 175/185 Verifying : google-noto-fonts-common-20230801-4.fc39.noarch 176/185 Verifying : google-noto-sans-vf-fonts-20230801-4.fc39.noarch 177/185 Verifying : libRmath-4.3.2-1.fc39.x86_64 178/185 Verifying : libRmath-devel-4.3.2-1.fc39.x86_64 179/185 Verifying : libgfortran-13.2.1-4.fc39.x86_64 180/185 Verifying : libquadmath-13.2.1-4.fc39.x86_64 181/185 Verifying : libquadmath-devel-13.2.1-4.fc39.x86_64 182/185 Verifying : libstdc++-devel-13.2.1-4.fc39.x86_64 183/185 Verifying : libtirpc-devel-1.3.4-0.fc39.x86_64 184/185 Verifying : sysprof-capture-devel-45.1-1.fc39.x86_64 185/185 Installed products updated. Installed: R-CRAN-Matrix-1.6.3-1.fc39.copr6636945.x86_64 R-CRAN-R6-2.5.1-1.fc39.copr6279323.noarch R-CRAN-Rcpp-1.0.11-1.fc39.copr6279302.x86_64 R-CRAN-RcppArmadillo-0.12.6.6.0-1.fc39.copr6589779.x86_64 R-CRAN-RcppProgress-0.4.2-3.fc39.copr6279637.noarch R-CRAN-cli-3.6.1-1.fc39.copr6279347.x86_64 R-CRAN-dplyr-1.1.4-1.fc39.copr6691319.x86_64 R-CRAN-fansi-1.0.5-1.fc39.copr6506680.x86_64 R-CRAN-generics-0.1.3-1.fc39.copr6279393.noarch R-CRAN-glue-1.6.2-1.fc39.copr6279303.x86_64 R-CRAN-igraph-1.5.1-1.fc39.copr6664799.x86_64 R-CRAN-lattice-0.22.5-1.fc39.copr6562879.x86_64 R-CRAN-lifecycle-1.0.4-1.fc39.copr6614518.noarch R-CRAN-magrittr-2.0.3-1.fc39.copr6279321.x86_64 R-CRAN-pillar-1.9.0-1.fc39.copr6286818.noarch R-CRAN-pkgconfig-2.0.3-3.fc39.copr6279322.noarch R-CRAN-purrr-1.0.2-1.fc39.copr6286812.x86_64 R-CRAN-rlang-1.1.2-1.fc39.copr6598950.x86_64 R-CRAN-stringi-1.8.2-1.fc39.copr6686191.x86_64 R-CRAN-stringr-1.5.1-1.fc39.copr6636964.noarch R-CRAN-tibble-3.2.1-1.fc39.copr6288598.x86_64 R-CRAN-tidygraph-1.2.3-1.fc39.copr6293533.x86_64 R-CRAN-tidyr-1.3.0-1.fc39.copr6290987.x86_64 R-CRAN-tidyselect-1.2.0-1.fc39.copr6286814.noarch R-CRAN-utf8-1.2.4-1.fc39.copr6555966.x86_64 R-CRAN-vctrs-0.6.4-1.fc39.copr6524681.x86_64 R-CRAN-withr-2.5.2-1.fc39.copr6583488.noarch R-core-4.3.2-1.fc39.x86_64 R-core-devel-4.3.2-1.fc39.x86_64 R-devel-4.3.2-1.fc39.x86_64 R-java-4.3.2-1.fc39.x86_64 R-java-devel-4.3.2-1.fc39.x86_64 R-littler-0.3.18-4.fc39.x86_64 R-rpm-macros-1.2.1-7.fc39.noarch abattis-cantarell-vf-fonts-0.301-10.fc39.noarch alsa-lib-1.2.10-3.fc39.x86_64 annobin-docs-12.30-1.fc39.noarch annobin-plugin-gcc-12.30-1.fc39.x86_64 avahi-libs-0.8-24.fc39.x86_64 brotli-1.1.0-1.fc39.x86_64 brotli-devel-1.1.0-1.fc39.x86_64 bzip2-devel-1.0.8-16.fc39.x86_64 cairo-1.18.0-1.fc39.x86_64 cmake-filesystem-3.27.7-1.fc39.x86_64 copy-jdk-configs-4.1-3.fc39.noarch cpp-13.2.1-4.fc39.x86_64 crypto-policies-scripts-20231113-1.gitb402e82.fc39.noarch cups-libs-1:2.4.7-2.fc39.x86_64 dbus-libs-1:1.14.10-1.fc39.x86_64 default-fonts-core-sans-4.0-9.fc39.noarch desktop-file-utils-0.26-9.fc39.x86_64 emacs-filesystem-1:29.1-2.fc39.noarch expat-2.5.0-3.fc39.x86_64 flexiblas-3.3.1-5.fc39.x86_64 flexiblas-devel-3.3.1-5.fc39.x86_64 flexiblas-netlib-3.3.1-5.fc39.x86_64 flexiblas-netlib64-3.3.1-5.fc39.x86_64 flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64 flexiblas-openblas-openmp64-3.3.1-5.fc39.x86_64 fontconfig-2.14.2-5.fc39.x86_64 fontconfig-devel-2.14.2-5.fc39.x86_64 fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.x86_64 freetype-devel-2.13.1-2.fc39.x86_64 fribidi-1.0.13-2.fc39.x86_64 gc-8.2.2-4.fc39.x86_64 gcc-13.2.1-4.fc39.x86_64 gcc-c++-13.2.1-4.fc39.x86_64 gcc-gfortran-13.2.1-4.fc39.x86_64 gcc-plugin-annobin-13.2.1-4.fc39.x86_64 gettext-0.22-2.fc39.x86_64 gettext-envsubst-0.22-2.fc39.x86_64 gettext-libs-0.22-2.fc39.x86_64 gettext-runtime-0.22-2.fc39.x86_64 glib2-2.78.1-1.fc39.x86_64 glib2-devel-2.78.1-1.fc39.x86_64 glibc-devel-2.38-11.fc39.x86_64 glibc-headers-x86-2.38-11.fc39.noarch glpk-5.0-7.fc39.x86_64 gnutls-3.8.1-1.fc39.x86_64 google-noto-fonts-common-20230801-4.fc39.noarch google-noto-sans-vf-fonts-20230801-4.fc39.noarch graphite2-1.3.14-12.fc39.x86_64 graphite2-devel-1.3.14-12.fc39.x86_64 guile22-2.2.7-9.fc39.x86_64 harfbuzz-8.2.1-2.fc39.x86_64 harfbuzz-devel-8.2.1-2.fc39.x86_64 harfbuzz-icu-8.2.1-2.fc39.x86_64 java-17-openjdk-1:17.0.8.0.7-1.fc39.x86_64 java-17-openjdk-devel-1:17.0.8.0.7-1.fc39.x86_64 java-17-openjdk-headless-1:17.0.8.0.7-1.fc39.x86_64 javapackages-filesystem-6.1.0-10.fc39.noarch jbigkit-libs-2.1-26.fc39.x86_64 kernel-headers-6.5.4-300.fc39.x86_64 libICE-1.0.10-11.fc39.x86_64 libRmath-4.3.2-1.fc39.x86_64 libRmath-devel-4.3.2-1.fc39.x86_64 libSM-1.2.3-13.fc39.x86_64 libX11-1.8.7-1.fc39.x86_64 libX11-common-1.8.7-1.fc39.noarch libX11-devel-1.8.7-1.fc39.x86_64 libX11-xcb-1.8.7-1.fc39.x86_64 libXau-1.0.11-3.fc39.x86_64 libXau-devel-1.0.11-3.fc39.x86_64 libXcomposite-0.4.5-10.fc39.x86_64 libXext-1.3.5-3.fc39.x86_64 libXft-2.3.8-3.fc39.x86_64 libXft-devel-2.3.8-3.fc39.x86_64 libXi-1.8.1-2.fc39.x86_64 libXmu-1.1.4-3.fc39.x86_64 libXrender-0.9.11-3.fc39.x86_64 libXrender-devel-0.9.11-3.fc39.x86_64 libXt-1.2.1-5.fc39.x86_64 libXtst-1.2.4-3.fc39.x86_64 libb2-0.98.1-9.fc39.x86_64 libblkid-devel-2.39.2-1.fc39.x86_64 libdatrie-0.2.13-7.fc39.x86_64 libffi-devel-3.4.4-4.fc39.x86_64 libfontenc-1.1.6-3.fc39.x86_64 libgfortran-13.2.1-4.fc39.x86_64 libicu-73.2-2.fc39.x86_64 libicu-devel-73.2-2.fc39.x86_64 libjpeg-turbo-2.1.4-3.fc39.x86_64 liblerc-4.0.0-4.fc39.x86_64 libmount-devel-2.39.2-1.fc39.x86_64 libmpc-1.3.1-3.fc39.x86_64 libpng-2:1.6.37-15.fc39.x86_64 libpng-devel-2:1.6.37-15.fc39.x86_64 libquadmath-13.2.1-4.fc39.x86_64 libquadmath-devel-13.2.1-4.fc39.x86_64 libselinux-devel-3.5-5.fc39.x86_64 libsepol-devel-3.5-2.fc39.x86_64 libstdc++-devel-13.2.1-4.fc39.x86_64 libthai-0.1.29-6.fc39.x86_64 libtiff-4.4.0-8.fc39.x86_64 libtirpc-devel-1.3.4-0.fc39.x86_64 libtool-ltdl-2.4.7-7.fc39.x86_64 libwebp-1.3.2-2.fc39.x86_64 libxcb-1.13.1-12.fc39.x86_64 libxcb-devel-1.13.1-12.fc39.x86_64 libxcrypt-devel-4.4.36-2.fc39.x86_64 libxml2-devel-2.10.4-3.fc39.x86_64 lksctp-tools-1.0.19-4.fc39.x86_64 lua-5.4.6-3.fc39.x86_64 lua-posix-36.2.1-3.fc39.x86_64 make-1:4.4.1-2.fc39.x86_64 mkfontscale-1.2.2-4.fc39.x86_64 mpdecimal-2.5.1-7.fc39.x86_64 nettle-3.9.1-2.fc39.x86_64 nspr-4.35.0-14.fc39.x86_64 nss-3.94.0-2.fc39.x86_64 nss-softokn-3.94.0-2.fc39.x86_64 nss-softokn-freebl-3.94.0-2.fc39.x86_64 nss-sysinit-3.94.0-2.fc39.x86_64 nss-util-3.94.0-2.fc39.x86_64 openblas-0.3.21-6.fc39.x86_64 openblas-openmp-0.3.21-6.fc39.x86_64 openblas-openmp64-0.3.21-6.fc39.x86_64 pango-1.51.0-1.fc39.x86_64 pcre2-devel-10.42-1.fc39.2.x86_64 pcre2-utf16-10.42-1.fc39.2.x86_64 pcre2-utf32-10.42-1.fc39.2.x86_64 pixman-0.42.2-2.fc39.x86_64 python-pip-wheel-23.2.1-1.fc39.noarch python3-3.12.0-1.fc39.x86_64 python3-libs-3.12.0-1.fc39.x86_64 python3-setuptools-67.7.2-7.fc39.noarch suitesparse-5.13.0-3.fc39.x86_64 sysprof-capture-devel-45.1-1.fc39.x86_64 tcl-1:8.6.12-5.fc39.x86_64 tcl-devel-1:8.6.12-5.fc39.x86_64 tk-1:8.6.12-5.fc39.x86_64 tk-devel-1:8.6.12-5.fc39.x86_64 tre-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 tre-common-0.8.0-41.20140228gitc2f5d13.fc39.noarch tre-devel-0.8.0-41.20140228gitc2f5d13.fc39.x86_64 ttmkfdir-3.0.9-69.fc39.x86_64 tzdata-2023c-2.fc39.noarch tzdata-java-2023c-2.fc39.noarch xdg-utils-1.1.3-15.fc39.noarch xml-common-0.6.3-61.fc39.noarch xorg-x11-fonts-Type1-7.5-36.fc39.noarch xorg-x11-proto-devel-2023.2-2.fc39.noarch xz-devel-5.4.4-1.fc39.x86_64 zlib-devel-1.2.13-4.fc39.x86_64 Complete! Finish: build setup for R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm Start: rpmbuild R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm warning: source_date_epoch_from_changelog set but %changelog is missing Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qVTgpE + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf malan + /usr/bin/mkdir -p malan + cd malan + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/malan_1.0.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/malan-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/malan-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + '[' -d malan/src ']' + find malan/src -type f -exec sed -i s@/usr/bin/strip@/usr/bin/true@g '{}' ';' + '[' -d malan/src ']' + find malan/src/Makevars malan/src/Makevars.win -type f -exec sed -i s@-g0@@g '{}' ';' + find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.RhmDts + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd malan + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Fvpg9L + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd malan + mkdir -p /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/usr/local/lib/R/library malan * installing *source* package ‘malan’ ... ** package ‘malan’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)’ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c PROTO.cpp -o PROTO.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_build_pedigrees.cpp -o api_build_pedigrees.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_igraph.cpp -o api_igraph.o api_igraph.cpp: In function ‘Rcpp::XPtr from_igraph_rcpp(Rcpp::IntegerVector, Rcpp::IntegerMatrix)’: api_igraph.cpp:42:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 42 | for (size_t i = 0; i < edges.nrow(); ++i) { | ~~^~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_load_data.cpp -o api_load_data.o api_load_data.cpp: In function ‘void load_haplotypes(Rcpp::XPtr, Rcpp::IntegerVector, Rcpp::IntegerMatrix, bool)’: api_load_data.cpp:163:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 163 | for (int i = 0; i < N; ++i) { | ~~^~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_simulate.cpp -o api_simulate.o api_simulate.cpp: In function ‘Rcpp::List sample_geneology(size_t, int, int, int, bool, double, double, bool, bool)’: api_simulate.cpp:232:67: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 232 | while ((simulate_fixed_number_generations == true && generation < generations) || (simulate_fixed_number_generations == false && founders_left > 1)) { | ~~~~~~~~~~~^~~~~~~~~~~~~ api_simulate.cpp:284:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 284 | if (generation <= extra_generations_full) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ api_simulate.cpp:346:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 346 | for (int g = 0; g < individual_pids_tmp.size(); ++g) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_simulate_helper.cpp -o api_simulate_helper.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_simulate_varying_size.cpp -o api_simulate_varying_size.o api_simulate_varying_size.cpp: In function ‘Rcpp::List sample_geneology_varying_size(Rcpp::IntegerVector, int, int, bool, double, double, bool)’: api_simulate_varying_size.cpp:147:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Rcpp::traits::storage_type<13>::type’ {aka ‘int’} [-Wsign-compare] 147 | for (size_t i = 0; i < population_sizes[generations-1]; ++i) { api_simulate_varying_size.cpp:170:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Rcpp::traits::storage_type<13>::type’ {aka ‘int’} [-Wsign-compare] 170 | for (size_t i = 0; i < population_sizes[generations-1]; ++i) { api_simulate_varying_size.cpp:178:42: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 178 | for (size_t generation = 1; generation < generations; ++generation) { | ~~~~~~~~~~~^~~~~~~~~~~~~ api_simulate_varying_size.cpp:197:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | for (size_t i = 0; i < population_size; ++i) { | ~~^~~~~~~~~~~~~~~~~ api_simulate_varying_size.cpp:204:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 204 | for (size_t i = 0; i < children_population_size; ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ api_simulate_varying_size.cpp:227:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 227 | if (generation <= extra_generations_full) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ api_simulate_varying_size.cpp:228:42: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | for (size_t father_i = 0; father_i < population_size; ++father_i) { | ~~~~~~~~~^~~~~~~~~~~~~~~~~ api_simulate_varying_size.cpp:242:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | for (size_t i = 0; i < population_size; ++i) { | ~~^~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_autosomal.cpp -o api_utility_autosomal.o api_utility_autosomal.cpp: In function ‘void population_populate_autosomal_infinite_alleles(Rcpp::XPtr, double, bool)’: api_utility_autosomal.cpp:362:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 362 | for (int i = 1; i < alleles_support.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_autosomal_theta_unweighted.cpp -o api_utility_autosomal_theta_unweighted.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_autosomal_theta_weighted.cpp -o api_utility_autosomal_theta_weighted.o api_utility_autosomal_theta_weighted.cpp: In function ‘Rcpp::List estimate_autotheta_subpops_weighted_engine(std::vector >, std::vector >, std::vector)’: api_utility_autosomal_theta_weighted.cpp:367:19: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | if (P_AA.size() != r) { | ~~~~~~~~~~~~^~~~ api_utility_autosomal_theta_weighted.cpp:371:18: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 371 | if (p_A.size() != r) { | ~~~~~~~~~~~^~~~ api_utility_autosomal_theta_weighted.cpp:375:16: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 375 | if (n.size() != r) { | ~~~~~~~~~^~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_haplotypes.cpp -o api_utility_haplotypes.o api_utility_haplotypes.cpp: In function ‘void pedigrees_all_populate_haplotypes(Rcpp::XPtr >, int, const Rcpp::NumericVector&, double, double, bool)’: api_utility_haplotypes.cpp:57:12: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 57 | if (loci != mut_rates.size()) { | ~~~~~^~~~~~~~~~~~~~~~~~~ api_utility_haplotypes.cpp: In function ‘void pedigrees_all_populate_haplotypes_ladder_bounded(Rcpp::XPtr >, const Rcpp::NumericVector&, const Rcpp::IntegerVector&, const Rcpp::IntegerVector&, const Rcpp::Nullable >&, double, double, bool)’: api_utility_haplotypes.cpp:207:29: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 207 | if (mutation_rates.size() != lad_min.size()) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ api_utility_haplotypes.cpp:211:29: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 211 | if (mutation_rates.size() != lad_max.size()) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ api_utility_haplotypes.cpp: In function ‘int count_haplotype_occurrences_individuals(Rcpp::List, Rcpp::IntegerVector)’: api_utility_haplotypes.cpp:433:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | if (indv_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘int count_haplotype_near_matches_individuals(Rcpp::List, Rcpp::IntegerVector, int)’: api_utility_haplotypes.cpp:480:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 480 | if (indv_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘Rcpp::List haplotype_matches_individuals(Rcpp::List, Rcpp::IntegerVector)’: api_utility_haplotypes.cpp:532:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 532 | if (indv_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘int count_haplotype_occurrences_pedigree(Rcpp::XPtr, Rcpp::IntegerVector, int)’: api_utility_haplotypes.cpp:587:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 587 | if (dest_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘Rcpp::IntegerMatrix pedigree_haplotype_near_matches_meiosis(Rcpp::XPtr, int, int)’: api_utility_haplotypes.cpp:803:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 803 | if (dest_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘Rcpp::IntegerVector haplotypes_to_hashes(Rcpp::XPtr, Rcpp::IntegerVector)’: api_utility_haplotypes.cpp:924:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 924 | for (size_t i = 0; i < n; ++i) { | ~~^~~ api_utility_haplotypes.cpp:937:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 937 | for (int j = 0; j < indices.size(); ++j) { | ~~^~~~~~~~~~~~~~~~ api_utility_haplotypes.cpp: In function ‘Rcpp::List split_by_haplotypes(Rcpp::XPtr, Rcpp::IntegerVector)’: api_utility_haplotypes.cpp:965:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 965 | for (size_t i = 0; i < n; ++i) { | ~~^~~ api_utility_haplotypes.cpp: In function ‘Rcpp::List haplotype_partially_matches_individuals(Rcpp::List, Rcpp::IntegerVector, Rcpp::IntegerVector)’: api_utility_haplotypes.cpp:1043:23: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1043 | if (indv_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ api_utility_haplotypes.cpp: In function ‘Rcpp::XPtr >, std::vector >*> > build_haplotype_hashmap(const Rcpp::List&, bool)’: api_utility_haplotypes.cpp:1096:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1096 | for (size_t i = 0; i < n; ++i) { | ~~^~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_individual.cpp -o api_utility_individual.o api_utility_individual.cpp: In function ‘int brothers_matching(Rcpp::XPtr)’: api_utility_individual.cpp:329:23: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 329 | if (indv_h.size() != loci) { | ~~~~~~~~~~~~~~^~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_misc.cpp -o api_utility_misc.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_mixtures.cpp -o api_utility_mixtures.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_mixtures_analyse.cpp -o api_utility_mixtures_analyse.o api_utility_mixtures_analyse.cpp: In function ‘void analyse_set(int, const std::vector&, const std::vector >&, const std::vector&, const std::vector&, const std::vector >&, const std::vector >&, std::vector >&)’: api_utility_mixtures_analyse.cpp:43:68: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 43 | if ((haps_in_mixture_indices.size() + known_contributors.size()) != num_contributors) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:53:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 53 | for (int set_i = 0; set_i < haps_in_mixture_indices.size(); set_i++) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:72:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 72 | for (int set_i = 0; set_i < known_contributors.size(); ++set_i) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:77:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 77 | for (int set_i = 0; set_i < suggested_contributors.size(); ++set_i) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:100:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int level = 0; level < haps_in_mixture_indices.size(); level++) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp: In function ‘void nested_loop_operation(std::vector, std::vector&, int, int, const std::vector >&, const std::vector&, const std::vector&, const std::vector >&, const std::vector >&, std::vector >&)’: api_utility_mixtures_analyse.cpp:157:53: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 157 | if ((counters.size() + known_contributors.size()) != num_contributors) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:161:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 161 | if (level == counters.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:174:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | for (int set_i = 1; set_i < counters.size(); set_i++) { | ~~~~~~^~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp: In function ‘Rcpp::List analyse_mixture_result(Rcpp::List&, const Rcpp::List&, const Rcpp::List&)’: api_utility_mixtures_analyse.cpp:251:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | if (loci != true_donors[donor_i].size()) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:274:24: warning: comparison of integer expressions of different signedness: ‘std::unordered_set::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 274 | if (alleles.size() == K) { | ~~~~~~~~~~~~~~~^~~~ api_utility_mixtures_analyse.cpp:359:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 359 | for (int term_i = 0; term_i < terms_Hd.size(); ++term_i) { | ~~~~~~~^~~~~~~~~~~~~~~~~ api_utility_mixtures_analyse.cpp:390:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 390 | for (int term_i = 0; term_i < terms_Hp.size(); ++term_i) { | ~~~~~~~^~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c api_utility_pedigree.cpp -o api_utility_pedigree.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class_Individual.cpp -o class_Individual.o class_Individual.cpp: In member function ‘void Individual::haplotype_mutate(const std::vector&, double)’: class_Individual.cpp:380:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 380 | for (int loc = 0; loc < m_haplotype.size(); ++loc) { | ~~~~^~~~~~~~~~~~~~~~~~~~ class_Individual.cpp: In member function ‘void Individual::haplotype_mutate_ladder_bounded(const std::vector&, const std::vector&, const std::vector&, double)’: class_Individual.cpp:416:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 416 | for (int loc = 0; loc < m_haplotype.size(); ++loc) { | ~~~~^~~~~~~~~~~~~~~~~~~~ class_Individual.cpp: In member function ‘std::vector Individual::calculate_path_to(Individual*) const’: class_Individual.cpp:620:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 620 | for (LCA_index = 0; LCA_index < path_this.size() && LCA_index < path_dest.size(); LCA_index++) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ class_Individual.cpp:620:65: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 620 | for (LCA_index = 0; LCA_index < path_this.size() && LCA_index < path_dest.size(); LCA_index++) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class_Pedigree.cpp -o class_Pedigree.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class_Population.cpp -o class_Population.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class_SimulateChooseFather.cpp -o class_SimulateChooseFather.o class_SimulateChooseFather.cpp: In member function ‘virtual int GammaVarianceRandomFather::get_father_i()’: class_SimulateChooseFather.cpp:68:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 68 | for (jj = 0; jj < population_size_1; ++jj) { | ~~~^~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c helper_Individual.cpp -o helper_Individual.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c helper_generation.cpp -o helper_generation.o g++ -std=gnu++17 -I"/usr/include/R" -DNDEBUG -I'/usr/local/lib/R/library/Rcpp/include' -I'/usr/local/lib/R/library/RcppArmadillo/include' -I'/usr/local/lib/R/library/RcppProgress/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c test_misc.cpp -o test_misc.o g++ -std=gnu++17 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o malan.so PROTO.o RcppExports.o api_build_pedigrees.o api_igraph.o api_load_data.o api_simulate.o api_simulate_helper.o api_simulate_varying_size.o api_utility_autosomal.o api_utility_autosomal_theta_unweighted.o api_utility_autosomal_theta_weighted.o api_utility_haplotypes.o api_utility_individual.o api_utility_misc.o api_utility_mixtures.o api_utility_mixtures_analyse.o api_utility_pedigree.o class_Individual.o class_Pedigree.o class_Population.o class_SimulateChooseFather.o helper_Individual.o helper_generation.o test_misc.o -lflexiblas -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/usr/local/lib/R/library/00LOCK-malan/00new/malan/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘malan’ finding HTML links ... done analyse_mixture_result html analyse_mixture_results html as_tbl_graph.malan_pedigreelist html finding level-2 HTML links ... done brothers_matching html build_haplotype_hashmap html build_pedigrees html calc_autosomal_genotype_conditional_cumdist html calc_autosomal_genotype_probs html construct_M html count_brothers html count_haplotype_near_matches_individuals html count_haplotype_occurrences_individuals html count_haplotype_occurrences_pedigree html count_uncles html delete_haplotypeids_hashmap html estimate_autotheta_1subpop_genotypes html estimate_autotheta_1subpop_individuals html estimate_autotheta_subpops_genotypes html estimate_autotheta_subpops_individuals html estimate_autotheta_subpops_pids html estimate_autotheta_subpops_unweighted_genotypes html estimate_autotheta_subpops_unweighted_pids html father_matches html from_igraph html from_igraph_rcpp html generate_get_founder_haplotype_db html generate_get_founder_haplotype_ladder html get_allele_counts_genotypes html get_allele_counts_pids html get_brothers html get_children html get_cousins html get_family_info html get_father html get_generation html get_haplotype html get_haplotypes_in_pedigree html get_haplotypes_individuals html get_haplotypes_pids html get_individual html get_individuals html get_matching_pids_from_hashmap html get_nodes_edges html get_pedigree_as_graph html get_pedigree_from_individual html get_pedigree_id html get_pedigree_id_from_pid html get_pedigrees_tidy html get_pid html get_pids_in_pedigree html get_uncles html get_zero_haplotype_generator html grandfather_matches html haplotype_matches_individuals html haplotype_partially_matches_individuals html haplotypes_to_hashes html infer_generation html infer_generations html load_haplotypes html load_individuals html malan-package html meioses_generation_distribution html meiotic_dist html meiotic_dist_threshold html meiotic_radius html mixture_info_by_individuals_2pers html mixture_info_by_individuals_3pers html mixture_info_by_individuals_4pers html mixture_info_by_individuals_5pers html pedigree_as_igraph html pedigree_haplotype_matches_in_pedigree_meiosis_L1_dists html pedigree_haplotype_near_matches_meiosis html pedigree_size html pedigree_size_generation html pedigrees_all_populate_autosomal html pedigrees_all_populate_haplotypes html pedigrees_all_populate_haplotypes_custom_founders html pedigrees_all_populate_haplotypes_ladder_bounded html pedigrees_count html pedigrees_table html plot.malan_pedigree html plot.malan_pedigreelist html population_populate_autosomal_infinite_alleles html population_size_generation html print.malan_pedigree html print.malan_pedigreelist html print.malan_population html print.malan_population_abort html print_individual html relationship_allele_diff_dist html relationship_allele_diff_dist_sym html sample_autosomal_genotype html sample_geneology html sample_geneology_varying_size html set_generation html split_by_haplotypes html sub-sub-.malan_pedigreelist html sub-sub-.malan_population html test_create_population html ystr_kits html ystr_markers html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (malan) + test -d malan/src + cd malan/src + rm -f PROTO.o RcppExports.o api_build_pedigrees.o api_igraph.o api_load_data.o api_simulate.o api_simulate_helper.o api_simulate_varying_size.o api_utility_autosomal.o api_utility_autosomal_theta_unweighted.o api_utility_autosomal_theta_weighted.o api_utility_haplotypes.o api_utility_individual.o api_utility_misc.o api_utility_mixtures.o api_utility_mixtures_analyse.o api_utility_pedigree.o class_Individual.o class_Pedigree.o class_Population.o class_SimulateChooseFather.o helper_Individual.o helper_generation.o test_misc.o malan.so + rm -f /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/usr/local/lib/R/library/R.css + find /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/usr/local/lib/R/library -type f -exec sed -i s@/builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64@@g '{}' ';' + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.0.3-1.fc39.copr6703989 --unique-debug-suffix -1.0.3-1.fc39.copr6703989.x86_64 --unique-debug-src-base R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/malan find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 595 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/test_misc.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/helper_hash.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/helper_generation.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/helper_generation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/helper_Individual.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/helper_Individual.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_SimulateChooseFather.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_SimulateChooseFather.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Population.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Population.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Pedigree.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Pedigree.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Individual.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/class_Individual.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_pedigree.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_mixtures_analyse.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_mixtures.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_misc.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_individual.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_individual.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_haplotypes.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_autosomal_theta_weighted.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_autosomal_theta_unweighted.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_utility_autosomal.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_simulate_varying_size.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_simulate_helper.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_simulate.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_simulate.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_load_data.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_igraph.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/api_build_pedigrees.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64/malan/src/PROTO.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/malan/CITATION is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/malan/doc/case-study-partial.Rmd is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/malan/doc/introduction.Rmd is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 Provides: R-CRAN-malan = 1.0.3-1.fc39.copr6703989 R-CRAN-malan(x86-64) = 1.0.3-1.fc39.copr6703989 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-CRAN-malan-debugsource-1.0.3-1.fc39.copr6703989.x86_64 Provides: R-CRAN-malan-debugsource = 1.0.3-1.fc39.copr6703989 R-CRAN-malan-debugsource(x86-64) = 1.0.3-1.fc39.copr6703989 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-CRAN-malan-debuginfo-1.0.3-1.fc39.copr6703989.x86_64 Provides: R-CRAN-malan-debuginfo = 1.0.3-1.fc39.copr6703989 R-CRAN-malan-debuginfo(x86-64) = 1.0.3-1.fc39.copr6703989 debuginfo(build-id) = c05ffd17c15546206fdd2ec76a34642be8b092c7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-CRAN-malan-debugsource(x86-64) = 1.0.3-1.fc39.copr6703989 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-malan-debugsource-1.0.3-1.fc39.copr6703989.x86_64.rpm Wrote: /builddir/build/RPMS/R-CRAN-malan-debuginfo-1.0.3-1.fc39.copr6703989.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.NM6cx2 + umask 022 + cd /builddir/build/BUILD + cd malan + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-malan-1.0.3-1.fc39.copr6703989.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.zaN9qY + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/malan-SPECPARTS + rm -rf malan malan.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: source_date_epoch_from_changelog set but %changelog is missing Finish: rpmbuild R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm Finish: build phase for R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1701222189.587506/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-CRAN-malan-1.0.3-1.fc39.copr6703989.src.rpm) Config(child) 3 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-CRAN-malan-debugsource", "epoch": null, "version": "1.0.3", "release": "1.fc39.copr6703989", "arch": "x86_64" }, { "name": "R-CRAN-malan", "epoch": null, "version": "1.0.3", "release": "1.fc39.copr6703989", "arch": "src" }, { "name": "R-CRAN-malan", "epoch": null, "version": "1.0.3", "release": "1.fc39.copr6703989", "arch": "x86_64" }, { "name": "R-CRAN-malan-debuginfo", "epoch": null, "version": "1.0.3", "release": "1.fc39.copr6703989", "arch": "x86_64" } ] } RPMResults finished