residuals.PhyloEM {PhylogeneticEM} | R Documentation |
Residuals of a fitted object
Description
residuals
computes the residuals of some parameters.
Usage
## S3 method for class 'PhyloEM'
residuals(object, ...)
Arguments
object |
an object of class params_process or PhyloEM .
trait, and each column is a tip. The column names are checked against the
tip names of the tree.
incidence.matrix.full . Can be specified to avoid extra computations.
|
... |
for a PhyloEM object, further arguments to be passed on to
params_process.PhyloEM (to choose which parameters to extract from
the results, see documentation of this function).
|
Value
The log likelihood of the data with the provided parameters on the tree.
See Also
params_process
, PhyloEM
[Package
PhylogeneticEM version 1.7.0
Index]