rewireCompl {robin} | R Documentation |
rewires the graph, creates the communities and compares the communities through different measures.
rewireCompl(
data,
number,
community,
method = c("walktrap", "edgeBetweenness", "fastGreedy", "louvain", "spinglass",
"leadingEigen", "labelProp", "infomap", "optimal", "other"),
FUN = NULL,
measure = c("vi", "nmi", "split.join", "adjusted.rand"),
directed = FALSE,
weights = NULL,
steps = 4,
spins = 25,
e.weights = NULL,
v.weights = NULL,
nb.trials = 10,
resolution = 1
)
data |
The output of prepGraph |
number |
Number of rewiring trials to perform. |
community |
Community to compare with. |
method |
The clustering method, one of "walktrap", "edgeBetweenness", "fastGreedy", "louvain", "spinglass", "leadingEigen", "labelProp", "infomap". |
FUN |
see |
measure |
The measure for the comparison of the communities "vi", "nmi", "split.join", "adjusted.rand" |
directed |
This argument is settable only for "edgeBetweenness" method |
weights |
this argument is not settable for "infomap" method |
steps |
this argument is settable only for "leadingEigen"and"walktrap" method |
spins |
This argument is settable only for "infomap" method |
e.weights |
This argument is settable only for "infomap" method |
v.weights |
This argument is settable only for "infomap" method |
nb.trials |
This argument is settable only for "infomap" method |
resolution |
only for "louvain" and "leiden". Optional resolution parameter, lower values typically yield fewer, larger clusters (default=1). |