kp {biogeom} | R Documentation |
The data consist of the boundary data of four vertical projections of K. paniculata fruit sampled at Nanjing Forestry University campus in early October 2021.
data(kp)
In the data set, there are three columns of variables: Code
, x
, and y
.
Code
saves the codes of individual fruit;
x
saves the x
coordinates of the vertical projections of fruit in the Cartesian coordinate system (cm);
and y
saves the y
coordinates of the vertical projections of fruit in the Cartesian coordinate system (cm).
Li, Y., Quinn, B.K., Gielis, J., Li, Y., Shi, P. (2022) Evidence that supertriangles exist in nature from the vertical projections of Koelreuteria paniculata fruit. Symmetry 14, 23. doi:10.3390/sym14010023
data(kp)
uni.C <- sort( unique(kp$Code) )
ind <- 1
Data <- kp[kp$Code==uni.C[ind], ]
x0 <- Data$x
y0 <- Data$y
Res1 <- adjdata(x0, y0, ub.np=200, len.pro=1/20)
dev.new()
plot( Res1$x, Res1$y, asp=1, cex.lab=1.5, cex.axis=1.5, type="l",
xlab=expression(italic("x")), ylab=expression(italic("y")) )
x1 <- Res1$x
y1 <- Res1$y
x0.ini <- mean( x1 )
y0.ini <- mean( y1 )
theta.ini <- pi
a.ini <- 0.9
n1.ini <- c(1, 4)
n2.ini <- 5
n3.ini <- c(5, 10, 15)
ini.val <- list(x0.ini, y0.ini, theta.ini,
a.ini, n1.ini, n2.ini, n3.ini)
Res2 <- fitGE( GE, x=x1, y=y1, ini.val=ini.val,
m=3, simpver=5, nval=1, unit="cm",
par.list=FALSE, fig.opt=TRUE, angle=NULL,
control=list(reltol=1e-20, maxit=20000),
np=2000 )
graphics.off()