getPeptideCounts {PTXQC} | R Documentation |
Required columns are "fc.raw.file", "modified.sequence" and "is.transferred".
getPeptideCounts(df_evd)
df_evd |
Data.frame of evidence.txt as read by MQDataReader |
If match-between-runs was enabled during the MaxQuant run, the data.frame returned will contain separate values for 'transferred' evidence plus an 'MBRgain' column, which will give the extra MBR evidence in percent.
Data.frame with columns 'fc.raw.file', 'counts', 'category', 'MBRgain'