getAbundanceClass {PTXQC} | R Documentation |
Abundances (should be logged already) are grouped into different levels, starting from the smallest values ("low") to the highest values ("high"). Intermediate abundances are either assigned as "mid", or "low-mid". If the range is too large, only "low" and "high" are assigned, the intermediate values are just numbers.
getAbundanceClass(x)
x |
Vector of numeric values (in log10) |
Example: getAbundanceClass(c(12.4, 17.1, 14.9, 12.3)) ## –> factor(c("low", "high", "mid", "low"))
Vector of factors corresponding to input with abundance class names (e.g. low, high)