summarise_report_counts {ern} | R Documentation |
Summarise daily inferred reports
based on original reporting schedule and calculate error
Description
Summarise daily inferred reports
based on original reporting schedule and calculate error
Usage
summarise_report_counts(df, prm.daily.check)
Arguments
df |
Data frame. As output by get_use_dates() .
|
prm.daily.check |
List. Parameters for checking aggregated to daily report inference. Elements include:
-
agg.reldiff.tol : numerical tolerance (%) for relative error between aggregated inferred daily reports and original aggregated reports; chronological observations are dropped until this tolerance is first acheived (convergence at the start of the timeseries is often the worst, need to maintain uninterrupted daily timeseries for input into Rt calculation).
Set this entire argument to NULL to use inferred daily reports as is.
|
Value
Data frame
[Package
ern version 2.0.0
Index]