AssayData-StdAssay {SeuratObject} | R Documentation |
General accessor and setter functions for Assay
objects.
GetAssayData
can be used to pull information from any of the
expression matrices (eg. “counts”, “data”, or
“scale.data”). SetAssayData
can be used to replace one of these
expression matrices
## S3 method for class 'StdAssay'
GetAssayData(object, layer = NULL, slot = deprecated(), ...)
## S3 method for class 'StdAssay'
SetAssayData(object, layer, new.data, slot = deprecated(), ...)
object |
An object |
layer |
Name of layer to get or set |
slot |
|
... |
Arguments passed to other methods |
new.data |
New assay data to add |
GetAssayData
: returns the specified assay data
SetAssayData
: object
with the assay data set
GetAssayData
and SetAssayData
have been superseded. To fetch
expression matrices, use LayerData
; to set expression data,
use LayerData<-