processed_table {tempted} | R Documentation |
Central-log-ratio (clr) transformed OTU table from the ECAM data
processed_table
A data.frame with rows representing samples and matching with data.frame meta_table
and columns representing microbial features (i.e. OTUs).
Entries do not need to be transformed, and will be directly used by tempted
.
This data.frame is used to illustrate how tempted
can be used for
general form of multivariate longitudinal data already preprocessed by user.
Bokulich, Nicholas A., et al. "Antibiotics, birth mode, and diet shape microbiome maturation during early life." Science translational medicine 8.343 (2016): 343ra82-343ra82.