find_markers {scCAN} | R Documentation |
Perform cluster-wise Wilcox test and fold-change for each gene.
find_markers(input_data_matrix, cluster_labels, identity = 1, threads = 8)
input_data_matrix |
An expression matrix in which rows are genes and columns are cells. |
cluster_labels |
A vector of cluster labels obtained from clustering methods. |
identity |
A parameter to select specific cluster |
threads |
A parameter to control number of cores used for analysis
|
A list that contains p-value and fold-change ratio for all genes of each cluster.