parse_beast2_output {babette} | R Documentation |
Process the 'BEAST2' output dependent on 'BEAST2' package specifics
parse_beast2_output(out, inference_model)
out |
a list with the complete babette output, with elements:
|
inference_model |
a Bayesian phylogenetic inference model, as returned by create_inference_model |
complete babette output with added attributes, which depends on the 'BEAST2' package.
marg_log_lik
the marginal log likelihood estimate
marg_log_lik_sd
the standard deviation around the estimate
estimates
the parameter estimates
created during the marginal likelihood estimation
trees
the trees
created during the marginal likelihood estimation
Richèl J.C. Bilderbeek